Metagenome / Metatranscriptome Family F079047

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F079047
Family Type	Metagenome / Metatranscriptome
Number of Sequences	116
Average Sequence Length	42 residues
Representative Sequence	MAYHGRRAVSAEMEDTVYACRSCGAELVRTSIRKTANSGAEAA
Number of Associated Samples	89
Number of Associated Scaffolds	116

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	60.34 %
% of genes near scaffold ends (potentially truncated)	37.07 %
% of genes from short scaffolds (< 2000 bps)	91.38 %
Associated GOLD sequencing projects	86
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.49

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (50.862 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil (22.414 % of family members)
Environment Ontology (ENVO)	Unclassified (41.379 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (60.345 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 45.07% β-sheet: 0.00% Coil/Unstructured: 54.93%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.49
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.49
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 116 Family Scaffolds
PF00857	Isochorismatase	33.62
PF00135	COesterase	16.38
PF00211	Guanylate_cyc	5.17
PF07859	Abhydrolase_3	5.17
PF04095	NAPRTase	0.86
PF01402	RHH_1	0.86
PF12697	Abhydrolase_6	0.86
PF05683	Fumerase_C	0.86

COG ID	Name	Functional Category	% Frequency in 116 Family Scaffolds
COG1335	Nicotinamidase-related amidase	Coenzyme transport and metabolism [H]	33.62
COG1535	Isochorismate hydrolase	Secondary metabolites biosynthesis, transport and catabolism [Q]	33.62
COG2272	Carboxylesterase type B	Lipid transport and metabolism [I]	16.38
COG0657	Acetyl esterase/lipase	Lipid transport and metabolism [I]	5.17
COG2114	Adenylate cyclase, class 3	Signal transduction mechanisms [T]	5.17
COG1488	Nicotinic acid phosphoribosyltransferase	Coenzyme transport and metabolism [H]	0.86
COG1838	Tartrate dehydratase beta subunit/Fumarate hydratase class I, C-terminal domain	Energy production and conversion [C]	0.86

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	50.86 %
Unclassified	root	N/A	49.14 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	50.86 %
Unclassified	root	N/A	49.14 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	50.86 %
Unclassified	root	N/A	49.14 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	49.14 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	47.41 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	49.14 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	26.72 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	2.59 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	49.14 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	18.97 %
Enterobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales	2.59 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	49.14 %
Enterobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Enterobacteriaceae	2.59 %
Beijerinckiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae	1.72 %
Hyphomicrobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae	0.86 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	49.14 %
Salmonella	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Enterobacteriaceae → Salmonella	2.59 %
Beijerinckiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae	1.72 %
Rhodoplanes	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes	0.86 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	49.14 %
Salmonella enterica	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Enterobacteriaceae → Salmonella → Salmonella enterica	2.59 %
Beijerinckiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae	1.72 %
unclassified Rhodoplanes	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes	0.86 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	49.14 %
Salmonella enterica	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Enterobacteriaceae → Salmonella → Salmonella enterica	2.59 %
Beijerinckiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae	1.72 %
Rhodoplanes sp. Z2-YC6860	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	0.86 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300004633\|Ga0066395_10195459	All Organisms → cellular organisms → Bacteria → Proteobacteria	1056	Open in IMG/M
3300005332\|Ga0066388_100733508	All Organisms → cellular organisms → Bacteria → Proteobacteria	1590	Open in IMG/M
3300005332\|Ga0066388_100803925	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1532	Open in IMG/M
3300005332\|Ga0066388_100842095	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1504	Open in IMG/M
3300005332\|Ga0066388_100939183	All Organisms → cellular organisms → Bacteria → Proteobacteria	1437	Open in IMG/M
3300005363\|Ga0008090_10170064	All Organisms → cellular organisms → Bacteria → Proteobacteria	2365	Open in IMG/M
3300005436\|Ga0070713_100485880	Not Available	1164	Open in IMG/M
3300005554\|Ga0066661_10294751	All Organisms → cellular organisms → Bacteria → Proteobacteria	1000	Open in IMG/M
3300005764\|Ga0066903_100246046	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2751	Open in IMG/M
3300005764\|Ga0066903_104816554	All Organisms → cellular organisms → Bacteria → Proteobacteria	717	Open in IMG/M
3300005764\|Ga0066903_107671898	Not Available	556	Open in IMG/M
3300005764\|Ga0066903_107699359	Not Available	554	Open in IMG/M
3300005764\|Ga0066903_107772108	Not Available	551	Open in IMG/M
3300005764\|Ga0066903_108740932	All Organisms → cellular organisms → Bacteria → Proteobacteria	515	Open in IMG/M
3300006046\|Ga0066652_100887775	All Organisms → cellular organisms → Bacteria → Proteobacteria	851	Open in IMG/M
3300006057\|Ga0075026_100275954	All Organisms → cellular organisms → Bacteria → Proteobacteria	910	Open in IMG/M
3300006174\|Ga0075014_100994630	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	508	Open in IMG/M
3300006755\|Ga0079222_10192291	All Organisms → cellular organisms → Bacteria → Proteobacteria	1217	Open in IMG/M
3300006806\|Ga0079220_10311873	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	978	Open in IMG/M
3300009792\|Ga0126374_10266525	Not Available	1128	Open in IMG/M
3300010043\|Ga0126380_11281211	Not Available	637	Open in IMG/M
3300010046\|Ga0126384_10097653	All Organisms → cellular organisms → Bacteria → Proteobacteria	2159	Open in IMG/M
3300010048\|Ga0126373_10033005	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	4494	Open in IMG/M
3300010048\|Ga0126373_10311617	All Organisms → cellular organisms → Bacteria → Proteobacteria	1573	Open in IMG/M
3300010048\|Ga0126373_10636927	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1121	Open in IMG/M
3300010303\|Ga0134082_10330359	Not Available	643	Open in IMG/M
3300010358\|Ga0126370_10922362	Not Available	790	Open in IMG/M
3300010359\|Ga0126376_11258866	Not Available	758	Open in IMG/M
3300010360\|Ga0126372_11365541	Not Available	740	Open in IMG/M
3300010360\|Ga0126372_11488132	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Enterobacteriaceae → Salmonella → Salmonella enterica	712	Open in IMG/M
3300010361\|Ga0126378_10381805	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae	1520	Open in IMG/M
3300010361\|Ga0126378_10627100	All Organisms → cellular organisms → Bacteria → Proteobacteria	1189	Open in IMG/M
3300010366\|Ga0126379_12018105	Not Available	679	Open in IMG/M
3300010366\|Ga0126379_12880563	All Organisms → cellular organisms → Bacteria	576	Open in IMG/M
3300010376\|Ga0126381_100408332	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1894	Open in IMG/M
3300010376\|Ga0126381_100955834	All Organisms → cellular organisms → Bacteria → Proteobacteria	1235	Open in IMG/M
3300010376\|Ga0126381_101417325	Not Available	1004	Open in IMG/M
3300010376\|Ga0126381_101679390	All Organisms → cellular organisms → Bacteria → Proteobacteria	917	Open in IMG/M
3300010398\|Ga0126383_10487086	All Organisms → cellular organisms → Bacteria → Proteobacteria	1289	Open in IMG/M
3300012181\|Ga0153922_1166489	Not Available	520	Open in IMG/M
3300012208\|Ga0137376_11574045	Not Available	548	Open in IMG/M
3300012210\|Ga0137378_11006291	Not Available	747	Open in IMG/M
3300012211\|Ga0137377_10964332	Not Available	784	Open in IMG/M
3300012971\|Ga0126369_10417558	Not Available	1383	Open in IMG/M
3300012971\|Ga0126369_12607765	Not Available	590	Open in IMG/M
3300012971\|Ga0126369_13234806	Not Available	533	Open in IMG/M
3300014157\|Ga0134078_10054396	Not Available	1395	Open in IMG/M
3300014501\|Ga0182024_10332014	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1994	Open in IMG/M
3300015373\|Ga0132257_101643800	Not Available	822	Open in IMG/M
3300016319\|Ga0182033_11005059	Not Available	742	Open in IMG/M
3300016341\|Ga0182035_10170084	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1695	Open in IMG/M
3300016357\|Ga0182032_10196934	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1531	Open in IMG/M
3300016371\|Ga0182034_10067731	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2436	Open in IMG/M
3300016371\|Ga0182034_11860848	Not Available	531	Open in IMG/M
3300016445\|Ga0182038_10131766	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1877	Open in IMG/M
3300017927\|Ga0187824_10217537	Not Available	654	Open in IMG/M
3300017932\|Ga0187814_10091512	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	1120	Open in IMG/M
3300017936\|Ga0187821_10029807	All Organisms → cellular organisms → Bacteria → Proteobacteria	1924	Open in IMG/M
3300017936\|Ga0187821_10090744	Not Available	1120	Open in IMG/M
3300017937\|Ga0187809_10026194	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1862	Open in IMG/M
3300017937\|Ga0187809_10136369	Not Available	842	Open in IMG/M
3300017966\|Ga0187776_10315227	All Organisms → cellular organisms → Bacteria → Proteobacteria	1021	Open in IMG/M
3300017973\|Ga0187780_10872810	Not Available	653	Open in IMG/M
3300017974\|Ga0187777_10780380	Not Available	682	Open in IMG/M
3300018058\|Ga0187766_10060597	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2240	Open in IMG/M
3300018062\|Ga0187784_10188287	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae	1685	Open in IMG/M
3300018085\|Ga0187772_10144675	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1567	Open in IMG/M
3300019888\|Ga0193751_1009355	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	5227	Open in IMG/M
3300019888\|Ga0193751_1060348	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1588	Open in IMG/M
3300020580\|Ga0210403_10076909	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2685	Open in IMG/M
3300021168\|Ga0210406_10116333	Not Available	2263	Open in IMG/M
3300021476\|Ga0187846_10328330	All Organisms → cellular organisms → Bacteria → Proteobacteria	632	Open in IMG/M
3300021478\|Ga0210402_12006805	All Organisms → cellular organisms → Bacteria	504	Open in IMG/M
3300021560\|Ga0126371_10258586	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1857	Open in IMG/M
3300021560\|Ga0126371_10942820	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1006	Open in IMG/M
3300021560\|Ga0126371_11483445	Not Available	807	Open in IMG/M
3300021560\|Ga0126371_12154650	Not Available	672	Open in IMG/M
3300025906\|Ga0207699_11296221	Not Available	539	Open in IMG/M
3300026847\|Ga0207802_1007231	Not Available	1016	Open in IMG/M
3300026981\|Ga0207822_1021206	Not Available	705	Open in IMG/M
3300027042\|Ga0207766_1018391	Not Available	791	Open in IMG/M
3300027516\|Ga0207761_1082282	Not Available	626	Open in IMG/M
3300027703\|Ga0207862_1146487	Not Available	706	Open in IMG/M
3300027775\|Ga0209177_10506581	Not Available	504	Open in IMG/M
3300027787\|Ga0209074_10493465	Not Available	530	Open in IMG/M
3300027824\|Ga0209040_10262910	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	859	Open in IMG/M
3300027911\|Ga0209698_11240868	All Organisms → cellular organisms → Bacteria	548	Open in IMG/M
3300031057\|Ga0170834_110128574	Not Available	1113	Open in IMG/M
3300031231\|Ga0170824_126927645	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1583	Open in IMG/M
3300031234\|Ga0302325_11946166	Not Available	728	Open in IMG/M
3300031543\|Ga0318516_10422518	All Organisms → cellular organisms → Bacteria	767	Open in IMG/M
3300031543\|Ga0318516_10732505	Not Available	560	Open in IMG/M
3300031544\|Ga0318534_10446349	Not Available	741	Open in IMG/M
3300031544\|Ga0318534_10645561	Not Available	600	Open in IMG/M
3300031546\|Ga0318538_10417498	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Enterobacteriaceae → Salmonella → Salmonella enterica	726	Open in IMG/M
3300031549\|Ga0318571_10459994	Not Available	506	Open in IMG/M
3300031564\|Ga0318573_10383721	Not Available	755	Open in IMG/M
3300031572\|Ga0318515_10459409	Not Available	681	Open in IMG/M
3300031679\|Ga0318561_10458082	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Enterobacteriaceae → Salmonella → Salmonella enterica	702	Open in IMG/M
3300031680\|Ga0318574_10725090	Not Available	583	Open in IMG/M
3300031751\|Ga0318494_10143355	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1342	Open in IMG/M
3300031763\|Ga0318537_10210878	Not Available	722	Open in IMG/M
3300031764\|Ga0318535_10558626	Not Available	507	Open in IMG/M
3300031765\|Ga0318554_10474182	Not Available	709	Open in IMG/M
3300031771\|Ga0318546_10447353	Not Available	904	Open in IMG/M
3300031799\|Ga0318565_10176920	All Organisms → cellular organisms → Bacteria → Proteobacteria	1037	Open in IMG/M
3300031823\|Ga0307478_10202296	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1599	Open in IMG/M
3300031833\|Ga0310917_10557966	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	778	Open in IMG/M
3300031859\|Ga0318527_10287401	Not Available	700	Open in IMG/M
3300031910\|Ga0306923_11436435	All Organisms → cellular organisms → Bacteria → Proteobacteria	725	Open in IMG/M
3300032041\|Ga0318549_10358026	Not Available	657	Open in IMG/M
3300032066\|Ga0318514_10565920	Not Available	605	Open in IMG/M
3300032261\|Ga0306920_103019432	Not Available	635	Open in IMG/M
3300032892\|Ga0335081_10005265	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	20471	Open in IMG/M
3300033289\|Ga0310914_10181198	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1874	Open in IMG/M
3300033290\|Ga0318519_10964455	Not Available	528	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	98.28%
Host-Associated	Host-Associated	1.72%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	89.66%
Aquatic	Environmental → Aquatic	8.62%
Plants	Host-Associated → Plants	0.86%
Fungi	Host-Associated → Fungi	0.86%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	87.93%
Freshwater	Environmental → Aquatic → Freshwater	6.03%
Sediment	Environmental → Aquatic → Sediment	2.59%
Peat	Environmental → Terrestrial → Peat	0.86%
Cave	Environmental → Terrestrial → Cave	0.86%
Rhizoplane	Host-Associated → Plants → Rhizoplane	0.86%
Mycelium	Host-Associated → Fungi → Mycelium	0.86%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	65.52%
Loam	Environmental → Terrestrial → Soil → Loam	15.52%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	6.90%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	6.03%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	2.59%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	0.86%
Unclassified	Environmental → Terrestrial → Cave → Unclassified	0.86%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.86%
Unclassified	Host-Associated → Fungi → Mycelium → Unclassified	0.86%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	31.03%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	28.45%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	13.79%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	6.03%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	5.17%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	3.45%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	2.59%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	1.72%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	1.72%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	0.86%
Tropical Rainforest	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest	0.86%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	0.86%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	0.86%
Unclassified	Environmental → Terrestrial → Cave → Unclassified → Unclassified	0.86%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.86%
Unclassified	Host-Associated → Fungi → Mycelium → Unclassified → Unclassified	0.86%

Habitat	Taxonomy	Distribution
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	22.41%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	21.55%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	13.79%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	6.90%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	5.17%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	5.17%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	3.45%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	2.59%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	2.59%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.72%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	1.72%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	1.72%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	1.72%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	1.72%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	0.86%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.86%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.86%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost	0.86%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	0.86%
Biofilm	Environmental → Terrestrial → Cave → Unclassified → Unclassified → Biofilm	0.86%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.86%
Attine Ant Fungus Gardens	Host-Associated → Fungi → Mycelium → Unclassified → Unclassified → Attine Ant Fungus Gardens	0.86%
Tropical Rainforest Soil	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest → Tropical Rainforest Soil	0.86%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005363	Tropical rainforest soil microbial communities from the Amazon Forest, Brazil, analyzing deforestation - Metatranscriptome F II A100 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005554	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006046	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101	Environmental	Open in IMG/M
3300006057	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2012	Environmental	Open in IMG/M
3300006174	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2014	Environmental	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006806	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100	Environmental	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010303	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09182015	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300012181	Attine ant fungus gardens microbial communities from New Jersey, USA - TSNJ006 MetaG	Host-Associated	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300014157	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_20cm_2_24_1 metaG	Environmental	Open in IMG/M
3300014501	Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300017927	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_4	Environmental	Open in IMG/M
3300017932	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW-S_4	Environmental	Open in IMG/M
3300017936	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_1	Environmental	Open in IMG/M
3300017937	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_4	Environmental	Open in IMG/M
3300017966	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP12_20_MG	Environmental	Open in IMG/M
3300017973	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_20_MG	Environmental	Open in IMG/M
3300017974	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_10_MG	Environmental	Open in IMG/M
3300018058	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_20_MG	Environmental	Open in IMG/M
3300018062	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018085	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300019888	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L1c2	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300021476	Biofilm microbial communities from the roof of an iron ore cave, State of Minas Gerais, Brazil - TC_06 Biofilm (v2)	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300025906	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300026847	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 20 (SPAdes)	Environmental	Open in IMG/M
3300026981	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 67 (SPAdes)	Environmental	Open in IMG/M
3300027042	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 68 (SPAdes)	Environmental	Open in IMG/M
3300027516	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 34 (SPAdes)	Environmental	Open in IMG/M
3300027703	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 81 (SPAdes)	Environmental	Open in IMG/M
3300027775	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control (SPAdes)	Environmental	Open in IMG/M
3300027787	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter (SPAdes)	Environmental	Open in IMG/M
3300027824	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM3 (SPAdes)	Environmental	Open in IMG/M
3300027911	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012 (SPAdes)	Environmental	Open in IMG/M
3300031057	Oak Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031234	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_2	Environmental	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031544	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f26	Environmental	Open in IMG/M
3300031546	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f23	Environmental	Open in IMG/M
3300031549	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f24	Environmental	Open in IMG/M
3300031564	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f21	Environmental	Open in IMG/M
3300031572	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f19	Environmental	Open in IMG/M
3300031679	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f23	Environmental	Open in IMG/M
3300031680	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f22	Environmental	Open in IMG/M
3300031751	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f24	Environmental	Open in IMG/M
3300031763	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f29	Environmental	Open in IMG/M
3300031764	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f27	Environmental	Open in IMG/M
3300031765	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f22	Environmental	Open in IMG/M
3300031771	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19	Environmental	Open in IMG/M
3300031799	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f21	Environmental	Open in IMG/M
3300031823	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05	Environmental	Open in IMG/M
3300031833	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178	Environmental	Open in IMG/M
3300031859	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f25	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300032041	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f22	Environmental	Open in IMG/M
3300032066	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f18	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300032892	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.5	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M
3300033290	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f15	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0066395_101954592	3300004633	Tropical Forest Soil	MAYHGRRAVSAEMEDTVYACRRCGSELVRTSIRKAANPGAEAA*
Ga0066388_1007335082	3300005332	Tropical Forest Soil	MAYHGRRAVSAEMEDTVFACRSCGAELVRTSIRKTANSGAEAA*
Ga0066388_1008039253	3300005332	Tropical Forest Soil	MAYHGRRAVSAEMEDTVYACRSCGAELVRTSIRHSANPAEAA*
Ga0066388_1008420953	3300005332	Tropical Forest Soil	MAYHGRRAVSAEMEDTIYACRSCGAELVRTSIRNAATSGAEAA*
Ga0066388_1009391832	3300005332	Tropical Forest Soil	MAYHGRRAVSAEMEDTVYACRSCGAELVRTSIRHSADPAEAA*
Ga0008090_101700641	3300005363	Tropical Rainforest Soil	MAYHGRRAVSAEMEDTVFACRSCGAELVRTSIRHTTNPGAEAA*
Ga0070713_1004858802	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	MAYYGRRAVSAEMEDTVYACRSCGAELVRSSIRKAATSGAEAA*
Ga0066661_102947511	3300005554	Soil	YHGRRPVSAEIEDTVYACRRCGAELVRTSMRARTNPGVEAA*
Ga0066903_1002460462	3300005764	Tropical Forest Soil	MMPCPVCAGRMAYHARRAVSAEMEDTIYACRSCGAELIRTSMRKAAASGAEAA*
Ga0066903_1048165543	3300005764	Tropical Forest Soil	PCPVCAGRMTYRGRSVSAEMEDTIYACRRCGAELVRTSMRDVASSGAEAA*
Ga0066903_1076718981	3300005764	Tropical Forest Soil	GRRAVSAEMEDTVYACRNCGAELVRTSIRKAASSGAEAA*
Ga0066903_1076993592	3300005764	Tropical Forest Soil	MAYHGRRAVSAEMEDTVYACRSCGAELVRTSICKTANSGAEAA*
Ga0066903_1077721082	3300005764	Tropical Forest Soil	MAYHGHRAVSAEMEDTVYACRSCGAELVRTSIRHAANPAEAA*
Ga0066903_1087409321	3300005764	Tropical Forest Soil	VSAEMEDTIYACRRCGAEVVRTSMRNVASSGAEAA*
Ga0066652_1008877752	3300006046	Soil	SAEMEDTVYACRRCGAELVRTSILKAGSPGAEAA*
Ga0075026_1002759542	3300006057	Watersheds	MIYHGRRPVSAEMEDTVYACRRCGAELVRTSMRARTNPGVEAA*
Ga0075014_1009946302	3300006174	Watersheds	MAYHGRRAVSAEVEDTVYACRRCGAELVRSSIRKATSTGAEAA*
Ga0079222_101922912	3300006755	Agricultural Soil	MAYHGRRAVSAEMEDTVYACRSCGAELVRSSNRKAATSGAEAA*
Ga0079220_103118732	3300006806	Agricultural Soil	MAYHGRRAVSAEMEDTVYACRSCGAELVRSSIRKAATSGAEAA*
Ga0126374_102665252	3300009792	Tropical Forest Soil	MAYHGRRAVSPDMEDTVFACRSCGAELVRTSIRQAVKSGAEAA*
Ga0126380_112812111	3300010043	Tropical Forest Soil	MTYRGRSVSAEMEDTIYACRRCGAEVVRTSMRNVASSGAEAA*
Ga0126384_100976533	3300010046	Tropical Forest Soil	MAYHGRRAVSPEMEDTVFACRSCGAELVRTSIRQAVNPGAEAA*
Ga0126373_100330053	3300010048	Tropical Forest Soil	MTYRGRSVSAEMEDTIYACRRCGAELVRTSMRDVASSGAEAA*
Ga0126373_103116172	3300010048	Tropical Forest Soil	MAYHARRAVSAEMEDTIYACRSCGAELIRTSMRKAAASGAEAA*
Ga0126373_106369271	3300010048	Tropical Forest Soil	MAYHGRRAVSAEIEDTVYACRSCGAELVRTSIRHSANPGVEAA*
Ga0134082_103303592	3300010303	Grasslands Soil	MAYHGRRAVSAEMEDTVYACRRCGAELVRTSILKAGSPGAEAA*
Ga0126370_109223622	3300010358	Tropical Forest Soil	MTYRGRSVSAEMEDTIYACRGCGAELVRTSMRDVASSGAEAA*
Ga0126376_112588661	3300010359	Tropical Forest Soil	MAYRGRSVSAEMEDTTYACRRCGAEVVRTSMRNVASSGAEAA*
Ga0126372_113655412	3300010360	Tropical Forest Soil	MAYHGRRAVSAEMEDTVYACRSCGAELVRTSIRHSA
Ga0126372_114881321	3300010360	Tropical Forest Soil	MAYHGRRAVSAEMEDTVYACRSCGAELVRTSIRHPANPAEAA*
Ga0126378_103818051	3300010361	Tropical Forest Soil	MAYHGRRAVSAEIEDTVYACRSCGAELVRTSIRPSANPGAEAA*
Ga0126378_106271001	3300010361	Tropical Forest Soil	YHGRRAVSPEMEDTVFACRSCGAELVRTSIRQAVKSGAEAA*
Ga0126379_120181051	3300010366	Tropical Forest Soil	MAYHGRRAVSAEMEDTVYACRSCGAELVRTSIRHSAN
Ga0126379_128805632	3300010366	Tropical Forest Soil	MAYHGRRAVSPEMEDTVFACRSCGAELVRTSIRQAV
Ga0126381_1004083323	3300010376	Tropical Forest Soil	MAYHGRCAVSAEMEDTVYACRSCGAELVRTSIPQAASGAEAA*
Ga0126381_1009558342	3300010376	Tropical Forest Soil	MAYHGRRAVSADMEDTIYTCRQCGAELVRTSIRKATSPGAEAA*
Ga0126381_1014173251	3300010376	Tropical Forest Soil	MSYHGRRAVSAEIEDTVYACRSCGAELVRTSIRHSANPGVEAA*
Ga0126381_1016793902	3300010376	Tropical Forest Soil	RSVSAEMEDTIYACRRCGAEVVRTSMRNVASSGAEAA*
Ga0126383_104870861	3300010398	Tropical Forest Soil	VSAEMEDTVFACRSCGAELVRTSIRHTANPGAEAA*
Ga0153922_11664891	3300012181	Attine Ant Fungus Gardens	GRMAYHGRRAVSAEVEDTVYACRRCGAELVRSSIRKATSTGAEAA*
Ga0137376_115740452	3300012208	Vadose Zone Soil	MIYHGRRPVSAEMEDTVYACRRCGAELVRTSMRTRTNPGVEAA*
Ga0137378_110062912	3300012210	Vadose Zone Soil	RMIYHGRRPVSAEIEDTVYACRRCGAELVRTSMRTRTNSSIEAA*
Ga0137377_109643321	3300012211	Vadose Zone Soil	MIYHGRRPVSAEMEDTVYACRRCGAELVRTSMRTRTNPGVEA
Ga0126369_104175583	3300012971	Tropical Forest Soil	GRSVSAEMEDTIYACRRCGAELVRTSMRDVASSGAEAA*
Ga0126369_126077651	3300012971	Tropical Forest Soil	DRRAVSAEMEDTVYACRKCGAELVRTSIRQTANPGAEAA*
Ga0126369_132348062	3300012971	Tropical Forest Soil	MAYHARRAVSAEMEDTIYACRSCGAELIRTSMRKAAASSAEAA*
Ga0134078_100543961	3300014157	Grasslands Soil	MAYHGRRAASAEMEDTVYACRRCGAELVRTSILKAGSPGAEAA*
Ga0182024_103320142	3300014501	Permafrost	MVYHGRRIMSSDIEDTIYACRSCGAEVIRTSIRKTKGAEAA*
Ga0132257_1016438002	3300015373	Arabidopsis Rhizosphere	MAFHGRRAVSAEMEDTVYACRKCGAELVRTSIRQSANPGAEAA*
Ga0182033_110050591	3300016319	Soil	HGRRAVSAELEDTVYACRSCGAELVRTSIRQAANSGAEAA
Ga0182035_101700841	3300016341	Soil	GRSVSAEMEDTIYACRGCGAELVRTSMRDVASSGAEAA
Ga0182032_101969341	3300016357	Soil	MAYHACRAVSAEMEDTVYACRRCGSELVRTSIRKAANPGAEAA
Ga0182034_100677313	3300016371	Soil	MAYHGRRAVSAEMEDTVFACRSCGAELVRTSIRKTA
Ga0182034_118608482	3300016371	Soil	MAYHGRRAVSAELEDTVYACRSCGAELVRTSIRQAA
Ga0182038_101317663	3300016445	Soil	MAYHGRRPVSAELEDTVYACRSCGAELVRTSIRQAANPGAEAA
Ga0187824_102175372	3300017927	Freshwater Sediment	MAYHGRRAVSAEMEDTIYACRSCGAELVRTSIRKAANHAGNRGAEAA
Ga0187814_100915123	3300017932	Freshwater Sediment	RMSYEGRRAVSADLEDTVYACRRCGAELIRTSIRKIANPDAEAA
Ga0187821_100298073	3300017936	Freshwater Sediment	MAYHGRRAVSAEMEDTVYACRSCGAELVRTSICKAANPGAEAA
Ga0187821_100907442	3300017936	Freshwater Sediment	CAGRMAYHGCRAVSAEMEDTIFTCRQCGAELIRTSMRSAANPGAEAA
Ga0187809_100261942	3300017937	Freshwater Sediment	MSYEGRRAVSADLEDTVYACRRCGAELIRTSIRKIANPDAEAA
Ga0187809_101363691	3300017937	Freshwater Sediment	MAYNGRRAVSAEMEDTVYACRSCGAELVRTSICKAANPGAEAA
Ga0187776_103152272	3300017966	Tropical Peatland	MAYHGRRAVSTEMEDTVYACLSCGAELVRTSIRHAANPGAEAA
Ga0187780_108728101	3300017973	Tropical Peatland	MAYHGRRAVSAEIEDTVYACRSCGAELIRSSIRQAAHSGAEAA
Ga0187777_107803802	3300017974	Tropical Peatland	MAYHGRHAVSAELEDTVYACRSCGAELVRTSIRHNANPGAEAA
Ga0187766_100605972	3300018058	Tropical Peatland	MAYYGRRAVSAEMEDTIYTCRQCGAELVRTSIRKAATSGAEAA
Ga0187784_101882872	3300018062	Tropical Peatland	MVYQARSAVSSEMEDTIYACRRCGAELIRSSVCSVGSKKAEAA
Ga0187772_101446751	3300018085	Tropical Peatland	GRMSYEGRRAVSADLEDTVYACRRCGAELIRTAMRKIASADAEAA
Ga0193751_10093555	3300019888	Soil	MMYYGRRPVSAEIEDTVYACRRCGAELVRTSMRARTNPGVEAA
Ga0193751_10603483	3300019888	Soil	MMYHGRRPVSAEIEDTVYACRRCGAELVRTSMRARTNPGVEAA
Ga0210403_100769092	3300020580	Soil	MAYHGRRAASAEMEDTVYACRSCGAELVRSSIRKAATSGAEAA
Ga0210406_101163332	3300021168	Soil	MAYHGRRAVSAEMEDTVYACRSCGAELVRSSIRKAATSGAEAA
Ga0187846_103283301	3300021476	Biofilm	MAYHGRRAVSAEMEDTVYACRSCGAELVRTSIRKAATSGAEAA
Ga0210402_120068052	3300021478	Soil	MMYHGRRPVSAEMEDTVYACRRCGAELVRTSMRARTNPGVEAA
Ga0126371_102585862	3300021560	Tropical Forest Soil	MAYHGRRAVSAEMEDTVYACRRCGSELVRTSIRKAANPGAEAA
Ga0126371_109428202	3300021560	Tropical Forest Soil	MAYHGRRAVSAEMEDTVYACRSCGAELVRTSMRTIRGPGAEAA
Ga0126371_114834452	3300021560	Tropical Forest Soil	MAYHGRRAVSAEMEDTVYACRSCGAELVRTSIRHSADPAEAA
Ga0126371_121546502	3300021560	Tropical Forest Soil	MAYHARRAVSAEMEDTIYACRSCGAELIRTSMRKAAASGAEAA
Ga0207699_112962211	3300025906	Corn, Switchgrass And Miscanthus Rhizosphere	MAYHGRRAVSAELEDTIYACRKCGAELVRTSIRHSANPGTDAEAA
Ga0207802_10072312	3300026847	Tropical Forest Soil	MAYHGRRAVSAELEDTVYACRSCGAELVRTSIRQAANPGAEAA
Ga0207822_10212061	3300026981	Tropical Forest Soil	MAYHGRRAVSAEMEDTVYACRSCGAELVRTSIRKTANSGAEAA
Ga0207766_10183911	3300027042	Tropical Forest Soil	MAYHGRRAVSAELEDTVYACRSCGAELVRTSIRQATNPGAEAA
Ga0207761_10822821	3300027516	Tropical Forest Soil	MAYHGRRAVSAEMEDTVYACRSCGAELIRTSIRKAA
Ga0207862_11464872	3300027703	Tropical Forest Soil	MAYHGRRAVSAEMEDTVYACRRCGAELVRTSIRQAANSGAEAA
Ga0209177_105065812	3300027775	Agricultural Soil	CAGRMAYHGRRAVSAEMEDTVYACRSCGAELVRSSNRKAATSGAEAA
Ga0209074_104934651	3300027787	Agricultural Soil	RAVSAEMEDTVYACRSCGAELVRSSNRKAATSGAEAA
Ga0209040_102629102	3300027824	Bog Forest Soil	MAYHGRRAVSAEMEDTVYACRSCGAELIRTSICKAANPGAEAA
Ga0209698_112408682	3300027911	Watersheds	MGYHGRRAVSAEMEDTVYACRNCGAELVRTSICKAANPGAEAA
Ga0170834_1101285741	3300031057	Forest Soil	MAYQGRRAVSAEMEDTVYACRSCGAELVRSSIRKAATSGAEAA
Ga0170824_1269276452	3300031231	Forest Soil	MIYHGRRPVSAEMEDTVYACRRCGAELVRTSMRARTNPGVEAA
Ga0302325_119461662	3300031234	Palsa	HAVAYDMEDTVYACRRCGAEVIRTSMCKAKGAEAA
Ga0318516_104225182	3300031543	Soil	MAYHGRRAVSAEMEDTVFACRSCGAELVRTSIRKTANSGAEAA
Ga0318516_107325052	3300031543	Soil	MAYHGRRAVSAELEDTVYACRSCGAELVRTSIRQAANSGAEAA
Ga0318534_104463492	3300031544	Soil	MAYHGRRAVSAEMEDTVYACRSCGAELVRTSIRHANPGAEAA
Ga0318534_106455612	3300031544	Soil	MAYHGRRAVSAEMEDTVFACRSCGAELIRTSIRKTANSGAEAA
Ga0318538_104174981	3300031546	Soil	MAYHGRRAVSAELEDTVYACRSCGAELVRTSIRANSGAEAA
Ga0318571_104599941	3300031549	Soil	MPCPVCAGRMAYHGRRAVSAEMEDTVFACRSCGAELVRTSIRKTANSGAEAA
Ga0318573_103837211	3300031564	Soil	MAYHGRRAVSAELEDTVYACRSCGAELVRTSIRQTANSGAEAA
Ga0318515_104594092	3300031572	Soil	MAYHRRRAVSAEMEDTVFACRSCGAELVRTSIRKTANSGAEAA
Ga0318561_104580822	3300031679	Soil	MAYHGRRAVSAELEDTVYACRSCGAELVRTSTRQAANPGAEAA
Ga0318574_107250901	3300031680	Soil	YHGRRAVSAEMEDTVFACRSCGAELVRTSIRKTANSGAEAA
Ga0318494_101433551	3300031751	Soil	MAYHGRRAVSAEMEDTVFACRSCGAELVRTSIRKTAN
Ga0318537_102108782	3300031763	Soil	AGRMAYHGRRAVSAELEDTVYACRSCGAELVRTSIRANSGAEAA
Ga0318535_105586261	3300031764	Soil	PCPVCAGRMAYHGRRAVSTELEDTVYACRSCGAELVRTSIRQAANPGAEAA
Ga0318554_104741821	3300031765	Soil	HGRRAVSAELEDTVYACRSCGAELVRTSIRQAANPGAEAA
Ga0318546_104473531	3300031771	Soil	VCAGRMAYHGRRAVSAELEDTVYACRSCGAELVRTSIRQAANSGAEAA
Ga0318565_101769202	3300031799	Soil	LCAGRMAYHGRRAVSAEMEDTVFACRSCGAELVRTSIRKTANSGAEAA
Ga0307478_102022961	3300031823	Hardwood Forest Soil	MAYHGRRAVSAEVEDTVYACRRCGAELVRSSIRKAANSGAEAA
Ga0310917_105579662	3300031833	Soil	MAYHGRRAVSAELEDTVYACRSCGAELVRTSIRQATNSGAEAA
Ga0318527_102874012	3300031859	Soil	MAYHGRRAVSAEMEDTVFACRRCGAELVRTSICKTANSGAEAA
Ga0306923_114364352	3300031910	Soil	MAYHARRAVSAEMEDTVYACRRCGSELVRTSIRKAANPGAEAA
Ga0318549_103580261	3300032041	Soil	RMAYHGRRAVSAELEDTVYACRSCGAELVRTSIRQAANPGAEAA
Ga0318514_105659201	3300032066	Soil	YHGRRAVSAELEDTVYACRSCGAELVRTSIRANSGAEAA
Ga0306920_1030194321	3300032261	Soil	MAYHARRAVSAEMEDTVYACRRCGSELVRTSIRKAANSGAEAA
Ga0335081_1000526513	3300032892	Soil	MAYHGRRAVSAETEDTVYACRSCGAELVRTSIRQTATPGAEAA
Ga0310914_101811981	3300033289	Soil	AGRMTYRGRSVSAEMEDTIYACRGCGAELVRTSMRDVASSGAEAA
Ga0318519_109644551	3300033290	Soil	YRGRSVSAEMEDTIYACRGCGAELVRTSMRDVASSGAEAA

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F079047

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences