Metagenome Family F079046

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F079046
Family Type	Metagenome
Number of Sequences	116
Average Sequence Length	92 residues
Representative Sequence	MVEFGQMRMERLSRMLLLAGFCVLLGVVVPSPVATAPPDSRHAELRGACYCRAMSQLKCVGVVTRAECNKQCAEALCDDWFWMERLTCWNWGYGG
Number of Associated Samples	90
Number of Associated Scaffolds	116

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	62.93 %
% of genes near scaffold ends (potentially truncated)	27.59 %
% of genes from short scaffolds (< 2000 bps)	87.93 %
Associated GOLD sequencing projects	82
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.35

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Bacteria (100.000 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (32.759 % of family members)
Environment Ontology (ENVO)	Unclassified (44.828 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (49.138 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 21.95% β-sheet: 13.82% Coil/Unstructured: 64.23%
Feature Viewer

Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.35
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.35
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 116 Family Scaffolds
PF00528	BPD_transp_1	6.90
PF00496	SBP_bac_5	3.45
PF00005	ABC_tran	3.45
PF03544	TonB_C	2.59
PF13407	Peripla_BP_4	1.72
PF03243	MerB	0.86
PF04199	Cyclase	0.86
PF13795	HupE_UreJ_2	0.86
PF01078	Mg_chelatase	0.86
PF06742	DUF1214	0.86
PF01618	MotA_ExbB	0.86
PF02515	CoA_transf_3	0.86

COG ID	Name	Functional Category	% Frequency in 116 Family Scaffolds
COG0810	Periplasmic protein TonB, links inner and outer membranes	Cell wall/membrane/envelope biogenesis [M]	2.59
COG1804	Crotonobetainyl-CoA:carnitine CoA-transferase CaiB and related acyl-CoA transferases	Lipid transport and metabolism [I]	0.86
COG1878	Kynurenine formamidase	Amino acid transport and metabolism [E]	0.86
COG5361	Uncharacterized conserved protein	Mobilome: prophages, transposons [X]	0.86
COG5402	Uncharacterized protein, contains DUF1214 domain	Function unknown [S]	0.86

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Bacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis	80.17 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	9.48 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	80.17 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	6.03 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	0.86 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Candidatus Rokubacteria	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	80.17 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	5.17 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.86 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
unclassified Candidatus Rokubacteria	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria	43.10 %
unclassified Rhodospirillales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales	4.31 %
unclassified Deltaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria	0.86 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	43.10 %
Rhodospirillales bacterium URHD0088	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088	2.59 %
Rhodospirillales bacterium URHD0017	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0017	0.86 %
Deltaproteobacteria bacterium RBG_16_47_11	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium RBG_16_47_11	0.86 %
Rhodospirillales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium	0.86 %
Unclassified	root	N/A	0.00 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000364\|INPhiseqgaiiFebDRAFT_100649095	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	598	Open in IMG/M
3300000364\|INPhiseqgaiiFebDRAFT_101653403	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	3349	Open in IMG/M
3300000955\|JGI1027J12803_102514516	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	756	Open in IMG/M
3300000956\|JGI10216J12902_122759856	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	509	Open in IMG/M
3300002243\|C687J29039_10098595	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium RBG_16_47_11	1079	Open in IMG/M
3300002485\|C687J35088_10169585	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	643	Open in IMG/M
3300004267\|Ga0066396_10005826	All Organisms → cellular organisms → Bacteria	1340	Open in IMG/M
3300004268\|Ga0066398_10051241	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	835	Open in IMG/M
3300004633\|Ga0066395_10002909	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088	5912	Open in IMG/M
3300005093\|Ga0062594_100595331	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	967	Open in IMG/M
3300005332\|Ga0066388_102021882	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1034	Open in IMG/M
3300005332\|Ga0066388_105034502	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	671	Open in IMG/M
3300005332\|Ga0066388_106141238	All Organisms → cellular organisms → Bacteria	606	Open in IMG/M
3300005445\|Ga0070708_100315902	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1472	Open in IMG/M
3300005445\|Ga0070708_101080696	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	752	Open in IMG/M
3300005518\|Ga0070699_100421677	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	1208	Open in IMG/M
3300005553\|Ga0066695_10663674	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	616	Open in IMG/M
3300005713\|Ga0066905_100584350	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	943	Open in IMG/M
3300005764\|Ga0066903_100777749	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	1707	Open in IMG/M
3300005764\|Ga0066903_100951772	All Organisms → cellular organisms → Bacteria	1562	Open in IMG/M
3300005764\|Ga0066903_103225125	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	882	Open in IMG/M
3300005841\|Ga0068863_100544555	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	1145	Open in IMG/M
3300006046\|Ga0066652_101649238	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	587	Open in IMG/M
3300006175\|Ga0070712_100002381	All Organisms → cellular organisms → Bacteria	11576	Open in IMG/M
3300006852\|Ga0075433_10337686	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1332	Open in IMG/M
3300006854\|Ga0075425_102164900	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	620	Open in IMG/M
3300006871\|Ga0075434_100963028	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	868	Open in IMG/M
3300006903\|Ga0075426_10497315	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	906	Open in IMG/M
3300006904\|Ga0075424_100524489	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1265	Open in IMG/M
3300006914\|Ga0075436_100149592	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1643	Open in IMG/M
3300009038\|Ga0099829_10083220	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	2456	Open in IMG/M
3300009038\|Ga0099829_10691563	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	847	Open in IMG/M
3300009088\|Ga0099830_10352051	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1184	Open in IMG/M
3300009089\|Ga0099828_10675878	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	928	Open in IMG/M
3300009090\|Ga0099827_11831800	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	529	Open in IMG/M
3300009162\|Ga0075423_10178003	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium	2232	Open in IMG/M
3300009792\|Ga0126374_10178614	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1320	Open in IMG/M
3300010043\|Ga0126380_11041995	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	692	Open in IMG/M
3300010043\|Ga0126380_12155028	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	514	Open in IMG/M
3300010046\|Ga0126384_10312614	All Organisms → cellular organisms → Bacteria	1296	Open in IMG/M
3300010047\|Ga0126382_10891301	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	769	Open in IMG/M
3300010048\|Ga0126373_10015887	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088	6243	Open in IMG/M
3300010048\|Ga0126373_12136015	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	622	Open in IMG/M
3300010358\|Ga0126370_10072508	All Organisms → cellular organisms → Bacteria	2282	Open in IMG/M
3300010358\|Ga0126370_10193900	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	1528	Open in IMG/M
3300010358\|Ga0126370_10540657	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	993	Open in IMG/M
3300010359\|Ga0126376_10129369	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	1985	Open in IMG/M
3300010359\|Ga0126376_11356596	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	734	Open in IMG/M
3300010360\|Ga0126372_10301529	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	1409	Open in IMG/M
3300010361\|Ga0126378_10028984	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0088	4925	Open in IMG/M
3300010362\|Ga0126377_10693602	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	1070	Open in IMG/M
3300010366\|Ga0126379_11285539	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	838	Open in IMG/M
3300010376\|Ga0126381_100509698	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1698	Open in IMG/M
3300010396\|Ga0134126_12699450	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	539	Open in IMG/M
3300010398\|Ga0126383_10017470	All Organisms → cellular organisms → Bacteria	5413	Open in IMG/M
3300010398\|Ga0126383_10826618	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	1010	Open in IMG/M
3300010398\|Ga0126383_11542877	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	754	Open in IMG/M
3300011269\|Ga0137392_11542679	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	523	Open in IMG/M
3300011270\|Ga0137391_10277061	All Organisms → cellular organisms → Bacteria	1450	Open in IMG/M
3300012199\|Ga0137383_10559661	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	837	Open in IMG/M
3300012201\|Ga0137365_11057693	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	586	Open in IMG/M
3300012202\|Ga0137363_10000587	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	20325	Open in IMG/M
3300012202\|Ga0137363_10326953	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	1264	Open in IMG/M
3300012202\|Ga0137363_10761510	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	821	Open in IMG/M
3300012202\|Ga0137363_11711123	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	521	Open in IMG/M
3300012204\|Ga0137374_10389916	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	1110	Open in IMG/M
3300012205\|Ga0137362_10501001	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	1050	Open in IMG/M
3300012206\|Ga0137380_11108996	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	674	Open in IMG/M
3300012207\|Ga0137381_11496507	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	567	Open in IMG/M
3300012209\|Ga0137379_10986499	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	747	Open in IMG/M
3300012209\|Ga0137379_11441644	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	591	Open in IMG/M
3300012210\|Ga0137378_10589797	All Organisms → cellular organisms → Bacteria → Proteobacteria	1021	Open in IMG/M
3300012211\|Ga0137377_11647407	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	564	Open in IMG/M
3300012211\|Ga0137377_11864769	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	519	Open in IMG/M
3300012357\|Ga0137384_10491458	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1008	Open in IMG/M
3300012358\|Ga0137368_10424573	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	869	Open in IMG/M
3300012362\|Ga0137361_10445000	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	1190	Open in IMG/M
3300012363\|Ga0137390_11040436	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	769	Open in IMG/M
3300012532\|Ga0137373_10720577	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	742	Open in IMG/M
3300012929\|Ga0137404_10130820	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	2064	Open in IMG/M
3300012929\|Ga0137404_10662840	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	942	Open in IMG/M
3300012929\|Ga0137404_11252764	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	683	Open in IMG/M
3300012930\|Ga0137407_10371340	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	1320	Open in IMG/M
3300012971\|Ga0126369_10423612	All Organisms → cellular organisms → Bacteria	1374	Open in IMG/M
3300012971\|Ga0126369_11604929	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	740	Open in IMG/M
3300012971\|Ga0126369_12218729	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	636	Open in IMG/M
3300012976\|Ga0134076_10399755	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	612	Open in IMG/M
3300013306\|Ga0163162_10424784	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	1461	Open in IMG/M
3300015264\|Ga0137403_10386158	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	1282	Open in IMG/M
3300015374\|Ga0132255_103843809	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	638	Open in IMG/M
3300019789\|Ga0137408_1056302	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	915	Open in IMG/M
3300019789\|Ga0137408_1269923	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	601	Open in IMG/M
3300021560\|Ga0126371_10362448	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	1586	Open in IMG/M
3300025159\|Ga0209619_10374911	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	737	Open in IMG/M
3300025312\|Ga0209321_10152971	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	1230	Open in IMG/M
3300025313\|Ga0209431_10160827	All Organisms → cellular organisms → Bacteria → Proteobacteria	1777	Open in IMG/M
3300025314\|Ga0209323_10779856	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	506	Open in IMG/M
3300025325\|Ga0209341_10757654	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	741	Open in IMG/M
3300025907\|Ga0207645_10775037	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	652	Open in IMG/M
3300025910\|Ga0207684_11123495	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	653	Open in IMG/M
3300025922\|Ga0207646_11538392	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	575	Open in IMG/M
3300025930\|Ga0207701_10085875	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	2839	Open in IMG/M
3300026088\|Ga0207641_10338478	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	1431	Open in IMG/M
3300027654\|Ga0209799_1016360	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	1613	Open in IMG/M
3300027862\|Ga0209701_10578979	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	599	Open in IMG/M
3300027875\|Ga0209283_10032012	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0017	3286	Open in IMG/M
3300027875\|Ga0209283_10274074	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1116	Open in IMG/M
3300027882\|Ga0209590_10302228	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	1027	Open in IMG/M
3300031231\|Ga0170824_125100169	All Organisms → cellular organisms → Bacteria	1056	Open in IMG/M
3300031720\|Ga0307469_10282018	All Organisms → cellular organisms → Bacteria	1357	Open in IMG/M
3300032163\|Ga0315281_10006891	All Organisms → cellular organisms → Bacteria → Proteobacteria	16078	Open in IMG/M
3300032180\|Ga0307471_102681198	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	632	Open in IMG/M
3300032205\|Ga0307472_100585691	All Organisms → cellular organisms → Bacteria	981	Open in IMG/M
3300032205\|Ga0307472_102182648	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	558	Open in IMG/M
3300033233\|Ga0334722_11005882	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	587	Open in IMG/M
3300033805\|Ga0314864_0145971	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	600	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	89.66%
Host-Associated	Host-Associated	10.34%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	87.93%
Plants	Host-Associated → Plants	10.34%
Aquatic	Environmental → Aquatic	1.72%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	87.93%
Rhizosphere	Host-Associated → Plants → Rhizosphere	6.90%
Rhizoplane	Host-Associated → Plants → Rhizoplane	3.45%
Freshwater	Environmental → Aquatic → Freshwater	1.72%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	68.97%
Loam	Environmental → Terrestrial → Soil → Loam	18.10%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	6.03%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	2.59%
Lake	Environmental → Aquatic → Freshwater → Lake	1.72%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	0.86%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.86%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.86%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	57.76%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	9.48%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	6.03%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	6.03%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	5.17%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	4.31%
Unclassified	Environmental → Terrestrial → Soil → Loam → Unclassified	3.45%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	2.59%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	1.72%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.86%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.86%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.86%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.86%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	32.76%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	20.69%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	9.48%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	6.03%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	5.17%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	5.17%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	3.45%
Soil	Environmental → Terrestrial → Soil → Loam → Unclassified → Soil	3.45%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.59%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment	1.72%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.72%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.86%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	0.86%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.86%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Corn, Switchgrass And Miscanthus Rhizosphere	0.86%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.86%
Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Peatland	0.86%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.86%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.86%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	0.86%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000955	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300002243	Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 16_2	Environmental	Open in IMG/M
3300002485	Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 16_1	Environmental	Open in IMG/M
3300004267	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 6 MoBio	Environmental	Open in IMG/M
3300004268	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 MoBio	Environmental	Open in IMG/M
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005553	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_144	Environmental	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005841	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2	Host-Associated	Open in IMG/M
3300006046	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300006903	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD5	Host-Associated	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300006914	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5	Host-Associated	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009088	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG	Environmental	Open in IMG/M
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010396	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental	Open in IMG/M
3300011270	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaG	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012201	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012204	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_100_16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012357	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaG	Environmental	Open in IMG/M
3300012358	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_100_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012363	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaG	Environmental	Open in IMG/M
3300012532	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_80_16 metaG	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300012976	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_5_0_1 metaG	Environmental	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300015264	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300019789	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300025159	Soil microbial communities from Rifle, Colorado, USA - sediment 16ft 3	Environmental	Open in IMG/M
3300025312	Soil microbial communities from Rifle, Colorado, USA - sediment 16ft 4 - CSP-I_5_4	Environmental	Open in IMG/M
3300025313	Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 13_3 (SPAdes)	Environmental	Open in IMG/M
3300025314	Soil microbial communities from Rifle, Colorado, USA - sediment 19ft 2	Environmental	Open in IMG/M
3300025325	Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 13_2 (SPAdes)	Environmental	Open in IMG/M
3300025907	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025930	Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)	Environmental	Open in IMG/M
3300026088	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300027654	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 MoBio (SPAdes)	Environmental	Open in IMG/M
3300027862	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027875	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027882	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300032163	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G07_0	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300033233	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - C3_bottom	Environmental	Open in IMG/M
3300033805	Tropical peat soil microbial communities from peatlands in Loreto, Peru - MAQ_50_10	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
INPhiseqgaiiFebDRAFT_1006490952	3300000364	Soil	KLNVVEMQRPSRRAIAEEYREVVESGQMYTGRWGRRLVVAGVCVALGLLLPRPISTAPPERQDVEHRGACYCRAMGELKCVGVVTKLACDKQCAEALCDDWFWMERLTCWNWGYGG*
INPhiseqgaiiFebDRAFT_1016534031	3300000364	Soil	MVEFGQMRTKLNRMFLLAGISVVLSFVMPNPVATGPSEGGDAEFRGACYCRAMGQLKCIGVVTQAACNKECAESLCDDWFWMERLTCWNWGYGG*
JGI1027J12803_1025145161	3300000955	Soil	KLNVVEMQRPSRRAIAQEYREVVEFGQMRTGRWGRRLVVAGVCVALGLLLPRPISTAPPERQDVEHRGACYCRAMGELKCVGVVTKLACDKQCAEALCDDWFWMERLTCWNWGYGG*
JGI10216J12902_1227598561	3300000956	Soil	RPSRRAIAQEYREVVESGQMRTGRLGGRIVVAGVCVTLGLLPLRPVSTAPPERQDVEHRGACYCRAMGELKCVGVVTKQACDKQCAEALCDDWFWMERLACWNWGYGG*
C687J29039_100985951	3300002243	Soil	ESGQMRMERMSRVLLLAGFSAILGVAVPSPVATAPPDSRHAELRGACYCRAMNQLKCXGVVTQTECNKQCAEALCDDWFWMERLTCWNWGYGG*
C687J35088_101695852	3300002485	Soil	MVESGQMRMERMSRVLLLAGFSAILGVAVPSPVATAPPDSRHAELRGACYCRAMNQLKCVGVVTQTECNKQCAEALCDDWFWMERLTCWNWGYGG*
Ga0066396_100058262	3300004267	Tropical Forest Soil	MGRVRRLLLLAGTCVMLGILMPRSVATAPPPSPSAELRGACYCRAMGQLNCVGVITQAECNKHCAEALCDDWFWMERLTCWNWGYGG*
Ga0066398_100512412	3300004268	Tropical Forest Soil	MLGILMPRSVATAPPPSPSAELRGACYCRAMGQLNCLGVITQAECNKHCAEALCDDWFWMERLTCWNWGYGG*
Ga0066395_100029093	3300004633	Tropical Forest Soil	MATGRVRRLLLLAGTCVMLGILMPRSVATAPPPSPSAELRGACYCRAMGQLNCVGVITQAECNKHCAEALCDDWFWMERLTCWNWGYGG*
Ga0062594_1005953313	3300005093	Soil	MLQCGQMWTMTKRAGISLAGFSLFLCAAGAPLVTTAISDAQTPELHGACYCRALHELKCVGVITRAQCNKQCAEALCDAWFWMERLTCWNWGYGG*
Ga0066388_1020218821	3300005332	Tropical Forest Soil	VAGFCLLLGAVAASFVTTAMSDAQPPELHGACYCRAMREVKCIGVITRAQCNKQCAEAFCDDWFWMERLTCWNWGYGG*
Ga0066388_1050345022	3300005332	Tropical Forest Soil	MVESGQMRTGRLRRGLLVSGVCVTLGILLPRPVITAPPDRQDAEHRGACYCRAMGELKCVGVVTKSACDKQCAEALCDDWFWMERLTCWNWGYGG*
Ga0066388_1061412381	3300005332	Tropical Forest Soil	RKPSVAHTRRPSRRAIAQEYREVVESGQMHMGRVRRVLLAAGVCVSLAVALPRPVPTAPPDRQVAEHHGACYCRAMGELKCVGVLTKTVCDKQCAEALCDDWFWMERLTCWNWGYGG*
Ga0070708_1003159021	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MVEFGQMRMELLSRVLLLAGLCVILGVVVPNPVATAPSDSRHAELRGACYCRAMSQLKCVGVVTKAECDKQCAETLCDDWFWMERLTCWNWGYGG*
Ga0070708_1010806961	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MRTGRLRRGLLVAGVCVTLGVLLPRPVITAPPDRQDAEHRGACYCRAMGELKCVGVVTKLACDKQCAEALCDDWFWMERLTCWNWGYGG*
Ga0070699_1004216772	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	VAGVCVTLGVLLPRPVITAPPDRQDAEHRGACYCRAMGELKCVGVVTKLACDKQCAEALCDDWFWMERLTCWNWGYGG*
Ga0066695_106636741	3300005553	Soil	MLQFGQMRMERLSRMLFLAGFCVILGVVVSSPVATAPPDSLHAELQGACYCRAMSQLKCVGVVTQAECNKQCAEALCDDWFWMERLTCWNWGYGG*
Ga0066905_1005843503	3300005713	Tropical Forest Soil	MVQCRQMSWPTSARAEILVAGFCLLLGAVAASFIATTISDAQPPEVQGACYCRAMREIKCIGVITRAQCNKQCAEAFCDDWFWMERLTCWNWGYGG*
Ga0066903_1007777491	3300005764	Tropical Forest Soil	LIATEYREMVQCRQMSWPTSARAEILVAGFCLLLGAVAASFVASTVSDAQPPEVQGACYCRAMREIKCIGVITRAQCNKQCAEAFCDDWFWMERLTCWNWGYGG*
Ga0066903_1009517722	3300005764	Tropical Forest Soil	VVESGQMHMGRVRRVLLVAGVCVTLAVVLPRPVPTAPPDRQVAEHHGACYCRAMGELKCVGVLTKTVCDKQCAEALCDDWFWMERLTCWNWGYGG*
Ga0066903_1032251252	3300005764	Tropical Forest Soil	MVESGQMRTGRLRRGLLVSGVCVTLGVLLPRPVITALPDSQDAEHRGACYCRAMGELKCVGVVTKSACDKQCAEALCDDWFWMERLTCWNWGYGG*
Ga0068863_1005445552	3300005841	Switchgrass Rhizosphere	MLQFGQMRMERLSRMLFLTGFCVILGAVVSSPVATAPPDSLRVELHGACYCRAMSQLKCVGVVTQAECNKQCAEALCDDWFWMERLTCWNWGYGG*
Ga0066652_1016492382	3300006046	Soil	GGTIARQYRKMLQFGQMRMERLSRMLFLAGFCVILGVVVSSPVATAPPDSLHAELQGACYCRAMSQLKCVDVVTQAECNKQCAEALCDDWFWMERLTCWNWGYGG*
Ga0070712_1000023818	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	MLFLTGFCVILGAVVSSPVATAPPDSLRVELHGACYCRAMSQLKCVGVVTQAECNKQCAEALCDDWFWMERLTCWNWGYGG*
Ga0075433_103376861	3300006852	Populus Rhizosphere	MLFLGGFCVILGVVVPSTVATGTPDSRNAELRGACYCRAMSQLKCVGVVTQAECNKQCAEALCDDWFWMERLTCWNWGYGG*
Ga0075425_1021649002	3300006854	Populus Rhizosphere	LARVGIGVAGFCLLLGVVAASFVSTAVSDAQPSELHGACYCRAMRELRCVGVLTRAQCNKQCAEALCDEWFWMERLTCWNWGYGG*
Ga0075434_1009630281	3300006871	Populus Rhizosphere	VEFGQMPMERLSRMLFLGGFCVILGVVVPSTVATGPPDSRNAELRGACYCRAMSQLKCVGVVTQAECNKQCAEALCDDWFWMERLTCWNWGYGG*
Ga0075426_104973151	3300006903	Populus Rhizosphere	REYREVVEFGQMPMERLSRMLFLGGFCVILGVVVPSTVATGPPDSRNAELRGACYCRAMSQLKCVGVVTQAECNKQCAEALCDDWFWMERLTCWNWGYGG*
Ga0075424_1005244891	3300006904	Populus Rhizosphere	VGIGVAGFCLLLGVVAASFVSTAVSDAQPSELHGACYCRAMRELRCVGVLTRAQCNKQCAEALCDEWFWMERLTCWNWGYGG*
Ga0075436_1001495921	3300006914	Populus Rhizosphere	MLFLGGFCVILGVVVPSTVATGPPDSRNAELRGACYCRAMSQLKCVGVVTQAECNKQCAEALCDDWFWMERLTCWNWGYGG*
Ga0099829_100832202	3300009038	Vadose Zone Soil	MVEFGQMRIERLSRMLLLAGFCVILGVVVPSPVATAPPDSRHVEFFGACYCRAMNQLTCVGVVTRAACNKQCAEALCDDWFWMERLTCWNWGYGG*
Ga0099829_106915632	3300009038	Vadose Zone Soil	VEFGQMRMERLSRMLFLAGFCVILGAVVPSPVATGPPDSRHAELRGACYCRAMSQLKCVGVVTQAECNKQCAEALCDDWFWMERLTCWNWGYGG*
Ga0099830_103520512	3300009088	Vadose Zone Soil	MVEFGQMRMKRLSRVLLLAGFCAILGVVVPSPVATAPPDSRHAELRGACYCRAMSQLKCVGVVTRAECNKQCAEALCDDWFWMERLTCWNWGYGG*
Ga0099828_106758781	3300009089	Vadose Zone Soil	RVLLLAGFCAILGVVVPSPVATAPPDSRHAELRGACYCRAMSQLKCVGVVTRAECNKQCAEALCDDWFWMERLTCWNWGYGG*
Ga0099827_118318001	3300009090	Vadose Zone Soil	ERLSRVLVLAGFCATLGVVMPNSVATAPPDSRHADPSGACYCRAMSELKCVGVVTRAECNKQCAEALCDDWFWMERLTCWNWGYGG*
Ga0075423_101780033	3300009162	Populus Rhizosphere	MPMERLSRMLFLGGFCVILGVVVPSPVATGPPDSRNAELRGACYCRAMSQLKCVGVVTQAECNKQCAEALCDDWFWMERLTCWNWGYGG*
Ga0126374_101786142	3300009792	Tropical Forest Soil	MSWPTSARAEILVAGFCLLLGAVAASFVASTVSDAQPPEVQGACYCRAMREIKCIGVITRAQCNKQCAEAFCDDWFWMERLTCWNWGYGG*
Ga0126380_110419952	3300010043	Tropical Forest Soil	MSWPTSTRAEILVAGFCLLLGAVAASFVASTVSDALPPDVQGACYCRAMREIKCIGVITRAQCNKQCAEAFCDDWFWMERLTCWNWGYGG*
Ga0126380_121550281	3300010043	Tropical Forest Soil	MHMGRVRRVLLVAGVCVTLAVVLPRPVPTAPPDRQVAEHHGACYCRAMGQLSCVGVTTKGQCDKHCTEAFCDEWFWLERLTCWNWGYGG*
Ga0126384_103126143	3300010046	Tropical Forest Soil	VAGVCVALGVVPTHPVATAPPERQDVEHRGACYCRAMGELKCVGVVTKLACDKQCAEALCDDWFWMERLTCWNWGYGG*
Ga0126382_108913011	3300010047	Tropical Forest Soil	MSWPTSARAEILVAGFCLLLGAVAASFIATTISDAQPPEVQGACYCRAMREVKCIGVITRAQCNKQCAEAFCDDWFWMERLTCWNWGYGG*
Ga0126373_100158876	3300010048	Tropical Forest Soil	MLGILMPRSVATAPPPSPSAELRGACYCRAMGQLNCVGVITQAECNKHCAEALCDDWFWMERLTCWNWGYGG*
Ga0126373_121360152	3300010048	Tropical Forest Soil	VCVTVGVLLPRPVITAPPDRQDGEHRGACYCRAMGELKCVGVVTKSVCDKRCAEALCDDWFWMERLTCWNWGYGG*
Ga0126370_100725082	3300010358	Tropical Forest Soil	MTSKHSAAETRSEIRRAIALEYREVVQSGQMATGRVRRLLLLAGTCVMLGILMPRSVATAPPPSPSAELRGACYCRAMGQLNCVGVITQAECNKHCAEALCDDWFWMERLTCWNWGYGG*
Ga0126370_101939002	3300010358	Tropical Forest Soil	MLLVAGVCVALGVVPTHPVATAPPERQDVEHRGACYCRAMGELKCVGVVTKLACDKQCAEALCDDWFWMERLTCWNWGYGG*
Ga0126370_105406571	3300010358	Tropical Forest Soil	MRMERLSRMLFLGGFCVILGVVVPSPVATGPPDSRNAELRGACYCRAMSQLKCVGVVTQAECNKQCAEALCDDWFWMERLTCWNWGYGG*
Ga0126376_101293692	3300010359	Tropical Forest Soil	MHMGRVRRVLLVAGVCVTLAVVLPRPVPTAPPDRQVAEHHGACYCRAMGELKCVGVLTKTACDKQCAEALCDDWFWMERLNCWNWGYGG*
Ga0126376_113565962	3300010359	Tropical Forest Soil	VCVTVGVLLPRPVITAPPDRQDGEHRGACYCRAMGELKCVGVVTKLACDKQCAEALCDDWFWMERLTCWNWGYGG*
Ga0126372_103015292	3300010360	Tropical Forest Soil	MHMGRVRRVLLVAGICVTLAVVLPRPVPTAPPDRQVAEHHGACYCRAMGELKCVGVLTRTACDKQCAEALCDDWFWMERLTCWNWGYGG*
Ga0126378_100289847	3300010361	Tropical Forest Soil	MHMGRVRRVLLVAGVCVTLAVVLPRPVPTAPPDRQVAEHHGACYCRAMGELKCVGVLTKTACDKQCAEALCDDWFWMERLTCWNWGYGG*
Ga0126377_106936022	3300010362	Tropical Forest Soil	MHMGRVRRVLLVAGVCVTLAVVLPRPVPTAPPDRQVAEHHGACYCRAMGELKCVGVLTRTACDKQCAEALCDDWFWMERLTCWNWGYGG*
Ga0126379_112855391	3300010366	Tropical Forest Soil	RLSRMLFLGGFCVILGVVVPSPVATGPPDSRNAELRGACYCRAMSQLKCVGVVTQAECNKQCAEALCDDWFWMERLTCWNWGYGG*
Ga0126381_1005096984	3300010376	Tropical Forest Soil	MHMERLSRMLFLGGFCVILGVVVPSPVATGPPDSRNAELRGACYCRAMSQLKCVGVVTQAECNKQCAEALCDDWFWMERLTCWNWGYGG*
Ga0134126_126994501	3300010396	Terrestrial Soil	MWTMTKRAGISLAGFSLFLCAAGAPLVTTAISDAQTPELHGACYCRALHELKCVGVITRAQCNKQCAEALCDDWFWMERLTCWNWGYGG*
Ga0126383_100174703	3300010398	Tropical Forest Soil	MRTGRLRRGLLVSGVCVTLGVLLPRPVITALPDSQDAEHRGACYCRAMGELKCVGVVTKSACDKQCAEALCDDWFWMERLTCWNWGYGG*
Ga0126383_108266182	3300010398	Tropical Forest Soil	MHMGRVRRVLLVAGVCVTLAVVPPRPVPTAPPDRQGAEHHGACYCRAMGQLSCVGVTTKGQCDKHCTEAFCDEWFWLERLTCWNWGYGG*
Ga0126383_115428772	3300010398	Tropical Forest Soil	MSSATSVRAEILVAAFCLLIGAVALSFVATISDAQAPELLGACYCRAMREVKCVGVITRAQCNKQCAEAFCDDWFWMERLTCWNWGYGG*
Ga0137392_115426791	3300011269	Vadose Zone Soil	EMVEFGQMRMERLSRVLLLAGFCVILGVVVPSPVATAPPDRRYAELRGACYCRALSELKCVGVVTRAECNKQCAEALCDDWFWMESLTCWNWGYGG*
Ga0137391_102770613	3300011270	Vadose Zone Soil	ALEYREMVESGQMSIERLSRVLVLAGFCATLGVVMPNSVATAPPDSRHAELRGACYCRAMGQLKCVGVVTQAECDKQCGEALCDDWFWMERLTCWNWGYGG*
Ga0137383_105596612	3300012199	Vadose Zone Soil	MVEFGQMRLERLSQMLGFCVILGVAVPSSVATAPPDSRHAEFRGACYCRAMSQLKCVGVVTQAECNKQCAEALCDEWFWMERLPCWNWGYGG*
Ga0137365_110576931	3300012201	Vadose Zone Soil	MVESGQMSIERLSRVLVLAGFCATLGVVMPNSVATAPPDSWHAELRGACYCRAMGQLKCVGVVTQAECDKQCGEALCDDWFWMERLTCWNWGYGG*
Ga0137363_1000058717	3300012202	Vadose Zone Soil	MVESGQMSIERLSRVLVLAGFCATLGVVMPNSVATAPPDSRHAELRGACYCRAMGQLKCVGVVTQAECDKQCGEALCDDWFWMERLTCWNWGYGG*
Ga0137363_103269532	3300012202	Vadose Zone Soil	MRMERLSRMLFLAGVCVIIGVVVPSPVATAPPDSRHAELRGACYCRAMSQLKCVGVVTQAECDKQCAEALCDDWFWMERLTCWNWGYGG*
Ga0137363_107615101	3300012202	Vadose Zone Soil	MWSTSARLGIGFAGFCLLLGVVAVSFVTTAVSDAQPPEVHGACYCRAMRELTCVGVFTRAQCDKQCAETLCDEWFWMERLTCWNWGYGG*
Ga0137363_117111231	3300012202	Vadose Zone Soil	MRMERLSRMLFLAGFCVILGAVVPSPVATGPPDSRHAELRGACYCRAMSQLKCVGVVTQAECNKQCAEALCDDWFWMERLTCWNWGYGG*
Ga0137374_103899162	3300012204	Vadose Zone Soil	MVEFGQMRTKLNRMLLLAGFSVVLGLVIPNPVATGPANSRDAEFRGACYCRAMGQLKCVGVVTQAACNKECAEALCDDWFWMERLTCWNWGYGG*
Ga0137362_105010012	3300012205	Vadose Zone Soil	MVEFGQMRLERLSQMLGFCVILGVAVPSSVATASPDSRHAEFRGACYCRAMSQLKCVGVVTQAECNKQCAEALCDEWFWMERLPCWNWGYGG*
Ga0137380_111089962	3300012206	Vadose Zone Soil	MRTRLNRLPLLAGFCVVLGVVVPSSVATAPPESRHTEFRGACYCRAMSQLKCVGVVTRAECDKQCAEALCDDWFWMERLTCWNWGYGG*
Ga0137381_114965072	3300012207	Vadose Zone Soil	MVEFGQMRLERLSQMLGFCVILGVAVPSSVATAPPDSRHAEFRGACYCRAMSQLKCVGVVTQAECNKQCAEALCDEWFWMER
Ga0137379_109864991	3300012209	Vadose Zone Soil	MRTRLNRLPLLAGFCVVLGVVVPSSVVTAPPESRHTEFRGACYCRAMSQLKCVGVVTRAECDKQCAEALCDDWFWMERLTCWNWGYGG*
Ga0137379_114416441	3300012209	Vadose Zone Soil	MSIERLSRVLVLAGFCATLGVVMPNSVATAPPDSRHAELRGACYCRAMGQLKCVGVVTQAECDKQCGEALCDDWFWMERLTCWNWGYGG*
Ga0137378_105897972	3300012210	Vadose Zone Soil	MRTKLNRLLLLAGSCVVLGVVVPSSVVTAPPESRHTEFRGACYCRAMSQLKCVGVVTRAECDKQCAEALCDDWFWMERLTCWNWGYGG*
Ga0137377_116474071	3300012211	Vadose Zone Soil	SGQMSIERLSRVLVLAGFCATLGVVMPNSVATAPPDSRHAELRGACYCRAMGQLKCVGVVTQAECDKQCGEALCDDWFWMERLTCWNWGYGG*
Ga0137377_118647691	3300012211	Vadose Zone Soil	IAREYREMVEFGQMRLERLSQMLGFCVILGVAVPSSVATAPPDSRHAEFRGACYCRAMSQLKCVGVVTQAECNKQCAEALCDEWFWMERLPCWNWGYGG*
Ga0137384_104914581	3300012357	Vadose Zone Soil	MVESGQMSIERLSRMLALAGFCATLGVVMPNSVATAPPDSRHAELRGACYCRAMGQLKCVGVVTQAECDKQCGEALCDDWFWMERLTCWNWGYGG*
Ga0137368_104245731	3300012358	Vadose Zone Soil	MVEFGQMRTKLNRMLLLAGFSVVLGLVIPNPVATGPADSRDAEFRGACYCRAMGQLKCIGVVTQAACNKECAEALCDDWFWMERLTCWNWGYGG*
Ga0137361_104450001	3300012362	Vadose Zone Soil	MVEFGQMRLERLSQMLGFCVILGVAVPSSVATAPHDSRHAEFRGACYCRAMSQLKCVGVVTQAECNKQCAEALCDEWFWMERLPCWNWGYGG*
Ga0137390_110404362	3300012363	Vadose Zone Soil	MVEFGQMRMERLSRVLLLAGFCVILGVVVPSPVATAPPDSRHAEFRGACYCRAMSQLKCAGVVTQAECNKQCAEALCDDWFWMESLTCWNWGYGG*
Ga0137373_107205772	3300012532	Vadose Zone Soil	MVEFGQMRTKLNRMLLLAGFSVVLGLVIPNPVATGPADSRDAEFRGACYCRAMGQLKCVGVVTQAACNKECAEALCDDWFWMERLTCWNWGYGG*
Ga0137404_101308201	3300012929	Vadose Zone Soil	MVESGQMSIERLSRVLVLAGFCATLGVVMPNSVATAPPDSRHAELRGACYCRAMGQLKCVDVVTQAECDKQCGEALCDDWFWMERLTCWNWGYGG*
Ga0137404_106628401	3300012929	Vadose Zone Soil	MRIERLSRMLFLAGFCVILGVVVPSPVATAPPDSGHDELRGACYCRAMSHLKCVGVVTQAECNKQCAEALCDDWFWMERLT
Ga0137404_112527641	3300012929	Vadose Zone Soil	MVQFGQMRMARLSRMLLLAGFCGILGVVVPRLVATAPPDSRHAELRGACYCRAMSQLKCVGVVTQAECNKQCAEALCDDWFWMERLTCWNWGYGG*
Ga0137407_103713402	3300012930	Vadose Zone Soil	MLFLAGFCVILGVVVPSPVATAPPDSRYDELRGACYCRAMSHLKCVGVVTQAECNKQCAEALCDDWFWMERLTCWNWGYGG*
Ga0126369_104236121	3300012971	Tropical Forest Soil	MHMGRVRRVLLAAGVCVSLAVALPRPVPTAPPDRQVAEHHGACYCRAMGELKCVGVLTKTACDKQCAEALCDDWFWMERLTCWNWGYGG*
Ga0126369_116049291	3300012971	Tropical Forest Soil	HSAAETRSEIRRAIALEYREVVQSGQMSTKRVRRLLLLAGTCVMLGILMPRSVATAPPPPPSAELRGACYCRAMGQLNCVGVVTQAECNKHCAEALCDDWFWMERLTCWNWGYGG*
Ga0126369_122187291	3300012971	Tropical Forest Soil	RSEIRRAIALEYREVVQSGQMATGRVRRLLLLAGTCVMLGILMPRSVATAPPPSPSAELRGACYCRAMGQLNCVGVITQAECNKHCAEALCDDWFWMERLTCWNWGYGG*
Ga0134076_103997551	3300012976	Grasslands Soil	MLFLAGFCVILGVVVSSPVATAPPDSLRAELHGACYCRTMSQLKCVGVVTQAECNKQCAEALCDDWFWMERLTCWNWGYGG*
Ga0163162_104247843	3300013306	Switchgrass Rhizosphere	MWTMTKRAGISLAGFSLFLCAAGAPLVTTAISDAQTPELHGACYCRALHELKCVGVITRAQCNKQCAEALCDAWFWMERLTCWNWGYGG*
Ga0137403_103861582	3300015264	Vadose Zone Soil	MRIERLSRMLFLAGFCVILGVVVPSPVATAPPDSGHDELRGACYCRAMSQLKCVGVVTQAECNKQCAEALCDDWFWMERLTCWNWGYGG*
Ga0132255_1038438092	3300015374	Arabidopsis Rhizosphere	MRTGRWGRRLVVAGVCVTLGLLLPRPVSTAPPERQDVEHRGACYCRAMGELKCVGVVTKLACDKQCAEALCDDWFWMERLTCWNWGYGG*
Ga0137408_10563022	3300019789	Vadose Zone Soil	MVESGQMSIERLSRVLVLAGFCATLGVVMPNSVATAPPDSRHAELRGACYCRAMGQLKCVDVVTQAECDKQCGEALCDDWFWMERLTCWNWGYGG
Ga0137408_12699231	3300019789	Vadose Zone Soil	MVESGQMSIERLSRVLVLAGFCATLGVVMPNSVATAPPDSRHAELRGACYCRAMGQLKCVDVVTQAECDKQCGEALCDDWFWMMERLTCWN
Ga0126371_103624482	3300021560	Tropical Forest Soil	VVESGQMHMGRLRRVLLVAGVCVTLAVVLPRPVPTAPPDRQVAEHHGACYCRAMGELKCVGVLTRTACDKQCAEALCDDWFWMERLTCWNWGYGG
Ga0209619_103749112	3300025159	Soil	MVESGQMRMERMSRVLLLAGFSAILGVAVPSPVATAPPDSRHAELRGACYCRAMNQLKCVGVVTQTECNKQCAEALCDDWFWMERLTCWNWGYGG
Ga0209321_101529711	3300025312	Soil	MVESGQMRMERMSRVLLLAGFSAILGVAVPSPVATAPPDSRHAELRGACYCRAMNQLKCVGVVTQTECNKQCAEALCDDWFWMERLTCWNWGY
Ga0209431_101608273	3300025313	Soil	MVESGQMRMERMSRVLLLAGFSAILGVAVPSPVATAPPDSRHAELRGACYCRAMNQLKCGGVVTQTECNKQCAEALCDDWFWMERLTCWNWGYGG
Ga0209323_107798562	3300025314	Soil	MVESGQMRMERMSRVLLLAGFSAILGVAVPSPVATAPPDSRHAELRGACYCRAMNQLKCVGVVTQTECNKQCAEALCDDWFWMERLRAS
Ga0209341_107576541	3300025325	Soil	SGQMRMERMSRVLLLAGFSAILGVAVPSPVATAPPDSRHAELRGACYCRAMNQLKCVGVVTQTECNKQCAEALCDDWFWMERLTCWNWGYGG
Ga0207645_107750371	3300025907	Miscanthus Rhizosphere	MTKRAGISLAGFSLFLCAAGAPLVTTAISDAQTPELHGACYCRALHELKCVGVITRAQCNKQCAEALCDAWFWMERLTCWNWGYGG
Ga0207684_111234951	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MVEFGQMRMELLSRVLLLAGLCVILGVVVPNPVATAPSDSRHAELRGACYCRAMSQLKCVGVVTKAECDKQCAETLCDDWFWMERLTCWNWGYGG
Ga0207646_115383921	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	ISRNIRITVGRDATGGAIAREYMEMVEFGQMRMELLSRVLLLAGLCVILGVVVPNPVATAPSDSRHAELRGACYCRAMSQLKCVGVVTKAECDKQCAETLCDDWFWMERLTCWNWGYGG
Ga0207701_100858751	3300025930	Corn, Switchgrass And Miscanthus Rhizosphere	TKRAGISLAGFSLFLCAAGAPLVTTAISDAQTPELHGACYCRALHELKCVGVITRAQCNKQCAEALCDAWFWMERLTCWNWGYGG
Ga0207641_103384781	3300026088	Switchgrass Rhizosphere	MLQFGQMRMERLSRMLFLTGFCVILGAVVSSPVATAPPDSLRVELHGACYCRAMSQLKCVGVVTQAECNKQCAEALCDDWFWMERLTCWNWGYGG
Ga0209799_10163602	3300027654	Tropical Forest Soil	VVESGQMHMGRVRRVLLVAGVCVTLAVVPPRPVPTAPPDRQGAEHHGACYCRAMGELKCVGVLTKTACDKQCAEALCDDWFWMERLNCWNWGYGG
Ga0209701_105789791	3300027862	Vadose Zone Soil	MVEFGQMRMKRLSRVLLLAGFCAILGVVVPSPVATAPPDSRHAELRGACYCRAMSQLKCVGVVTRAECNKQCAEALCDDWFWMERLTCWNWGYGG
Ga0209283_100320124	3300027875	Vadose Zone Soil	MVEFGQMRIERLSRMFLLAGLCVTLGVVVPGPVATAPPDSRHAEFLGACYCRAMNQVTCVGVVTRAACNKQCAEALCDDWFWMERLTCWNWGYGG
Ga0209283_102740742	3300027875	Vadose Zone Soil	MSRSIRITEGRNATGRAIAREYREMVEFGQMRLERLSRMLGFCVILGVVVPSSVATAPPDSRHAELRGACYCRAMSQLKCVGVVTQAECDKQCAEALCDDWFWMERLTCWNWGYGG
Ga0209590_103022282	3300027882	Vadose Zone Soil	MVEFGQMRLERLSQMLGFCVILGVAVPSSVATAPPDSRHAEFRGACYCRAMSQLKCVGVVTRAECNKQCAEALCDDWFWMERLTCWNWGYGG
Ga0170824_1251001692	3300031231	Forest Soil	VVESGQMRTGRWGRRLVVAGVCVTLGLLLPRPVSTAPPERQDVEHRGACYCRAMGELKCVGVVTRPACDKQCAEALCDDWFWMERLTCWNWGYGG
Ga0307469_102820182	3300031720	Hardwood Forest Soil	VAGVCVTLGVLLPRPVITAPPDREDAEHRGACYCRAMGELKCVGVVTKLACDKQCAEALCDDWFWLERLTCWNWGYGG
Ga0315281_1000689114	3300032163	Sediment	MVEFGQMRMERLSRMLLLAGFCVLLGVVVPSPVATAPPDSRHAELRGACYCRAMSQLKCVGVVTRAECNKQCAEALCDDWFWMERLTCWNWGYGG
Ga0307471_1026811981	3300032180	Hardwood Forest Soil	MRSMRTTRMRRAVFRVALALAVCAAVPGSVATAPPDGRQAELRGACYCRVMGTLNCVGMLAKAACDKQCAEALCDEWFWMERLACWNWGYGG
Ga0307472_1005856911	3300032205	Hardwood Forest Soil	TIPCASRKPSVVEMQRPSRRAIAQEYREVVESGQMRTGRLRRGLLVAGVCVTLGVLLPRPVITAPPDRQDAEHRGACYCRAMGELKCVGVVTKLACDKQCAEALCDDWFWMERLTCWNWGYGG
Ga0307472_1021826482	3300032205	Hardwood Forest Soil	MKRVRRVVSLAALCLTFGVAVPGRVATAPPDNPHADLRGACYCRAMGELNCVGVLTKVACNKQCAEALCDDWFWMERLPCWNWGYGG
Ga0334722_110058822	3300033233	Sediment	MVEFGQMRMERLSRVLLLAGFCVILGVVVASPVATAPPDTRHAELRGACYCRAMSQLKCVGVVTQAECNKQCAEALCDDWFWMERLTCWNWGYGG
Ga0314864_0145971_4_273	3300033805	Peatland	MSAASARVGRSLARFGLLLCVAAALLLIAKVSDAQPPELPGACYCRAMSELTCVGVITRAQCNKQCAEALCDEWFWMERLTCWNWGYGG

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F079046

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences