Metagenome / Metatranscriptome Family F078946

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F078946
Family Type	Metagenome / Metatranscriptome
Number of Sequences	116
Average Sequence Length	65 residues
Representative Sequence	MQRPPDPQLLGFLEAYDRHISDLALALREVILEEAPDASESIYQVYTVAIWFGFSGKMKDMF
Number of Associated Samples	98
Number of Associated Scaffolds	116

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	17.39 %
% of genes near scaffold ends (potentially truncated)	93.97 %
% of genes from short scaffolds (< 2000 bps)	89.66 %
Associated GOLD sequencing projects	92
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.68

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (75.862 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa (14.655 % of family members)
Environment Ontology (ENVO)	Unclassified (26.724 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (37.931 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 48.89% β-sheet: 0.00% Coil/Unstructured: 51.11%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.68
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.68
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 116 Family Scaffolds
PF00106	adh_short	10.34
PF01966	HD	4.31
PF13561	adh_short_C2	1.72
PF00578	AhpC-TSA	1.72
PF01553	Acyltransferase	1.72
PF00326	Peptidase_S9	1.72
PF07519	Tannase	1.72
PF00561	Abhydrolase_1	1.72
PF08808	RES	1.72
PF10459	Peptidase_S46	0.86
PF05532	CsbD	0.86
PF01152	Bac_globin	0.86
PF00873	ACR_tran	0.86
PF02567	PhzC-PhzF	0.86
PF01145	Band_7	0.86
PF00293	NUDIX	0.86
PF01979	Amidohydro_1	0.86
PF03551	PadR	0.86
PF00034	Cytochrom_C	0.86
PF12647	RNHCP	0.86
PF13620	CarboxypepD_reg	0.86
PF03544	TonB_C	0.86
PF09900	DUF2127	0.86
PF07045	DUF1330	0.86
PF08818	DUF1801	0.86
PF00392	GntR	0.86
PF13360	PQQ_2	0.86
PF00271	Helicase_C	0.86
PF02954	HTH_8	0.86
PF01842	ACT	0.86
PF14903	WG_beta_rep	0.86
PF03476	MOSC_N	0.86
PF00005	ABC_tran	0.86
PF12543	DUF3738	0.86
PF00296	Bac_luciferase	0.86
PF13560	HTH_31	0.86
PF03741	TerC	0.86
PF02321	OEP	0.86
PF09286	Pro-kuma_activ	0.86
PF08241	Methyltransf_11	0.86
PF13505	OMP_b-brl	0.86
PF04366	Ysc84	0.86

COG ID	Name	Functional Category	% Frequency in 116 Family Scaffolds
COG1538	Outer membrane protein TolC	Cell wall/membrane/envelope biogenesis [M]	1.72
COG5654	Predicted toxin component of a toxin-antitoxin system, contains RES domain	Defense mechanisms [V]	1.72
COG0384	Predicted epimerase YddE/YHI9, PhzF superfamily	General function prediction only [R]	0.86
COG0810	Periplasmic protein TonB, links inner and outer membranes	Cell wall/membrane/envelope biogenesis [M]	0.86
COG0861	Tellurite resistance membrane protein TerC	Inorganic ion transport and metabolism [P]	0.86
COG1695	DNA-binding transcriptional regulator, PadR family	Transcription [K]	0.86
COG1733	DNA-binding transcriptional regulator, HxlR family	Transcription [K]	0.86
COG1846	DNA-binding transcriptional regulator, MarR family	Transcription [K]	0.86
COG2141	Flavin-dependent oxidoreductase, luciferase family (includes alkanesulfonate monooxygenase SsuD and methylene tetrahydromethanopterin reductase)	Coenzyme transport and metabolism [H]	0.86
COG2346	Truncated hemoglobin YjbI	Inorganic ion transport and metabolism [P]	0.86
COG2930	Lipid-binding SYLF domain, Ysc84/FYVE family	Lipid transport and metabolism [I]	0.86
COG3217	N-hydroxylaminopurine reductase subunit YcbX, contains MOSC domain	Defense mechanisms [V]	0.86
COG3237	Uncharacterized conserved protein YjbJ, UPF0337 family	Function unknown [S]	0.86
COG4430	Uncharacterized conserved protein YdeI, YjbR/CyaY-like superfamily, DUF1801 family	Function unknown [S]	0.86
COG4934	Serine protease, subtilase family	Posttranslational modification, protein turnover, chaperones [O]	0.86
COG5470	Uncharacterized conserved protein, DUF1330 family	Function unknown [S]	0.86
COG5646	Iron-binding protein Fra/YdhG, frataxin family (Fe-S cluster biosynthesis)	Posttranslational modification, protein turnover, chaperones [O]	0.86
COG5649	Uncharacterized conserved protein, DUF1801 domain	Function unknown [S]	0.86

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	75.86 %
Unclassified	root	N/A	24.14 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	75.86 %
Unclassified	root	N/A	24.14 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	75.86 %
Unclassified	root	N/A	24.14 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	42.24 %
Unclassified	root	N/A	24.14 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	3.45 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	1.72 %
Nitrospirae	phylum	All Organisms → cellular organisms → Bacteria → Nitrospirae	1.72 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	24.14 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	23.28 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	3.45 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1.72 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1.72 %
Nitrospirae	phylum	All Organisms → cellular organisms → Bacteria → Nitrospirae	1.72 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	24.14 %
Bryobacterales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales	20.69 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3.45 %
unclassified Verrucomicrobia	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia	1.72 %
Betaproteobacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Betaproteobacteria incertae sedis	1.72 %
Nitrospirae	phylum	All Organisms → cellular organisms → Bacteria → Nitrospirae	1.72 %
Candidatus Angelobacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Angelobacter	0.86 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	0.86 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	24.14 %
Solibacteraceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae	17.24 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3.45 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1.72 %
Candidatus Accumulibacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Betaproteobacteria incertae sedis → Candidatus Accumulibacter	1.72 %
Nitrospirae	phylum	All Organisms → cellular organisms → Bacteria → Nitrospirae	1.72 %
Bryobacteraceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae	0.86 %
unclassified Bryobacterales	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → unclassified Bryobacterales	0.86 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	0.86 %
unclassified Candidatus Angelobacter	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Angelobacter → unclassified Candidatus Angelobacter	0.86 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	24.14 %
Candidatus Solibacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter	15.52 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3.45 %
unclassified Candidatus Accumulibacter	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Betaproteobacteria incertae sedis → Candidatus Accumulibacter → unclassified Candidatus Accumulibacter	1.72 %
Candidatus Sulfopaludibacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter	1.72 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1.72 %
Nitrospirae	phylum	All Organisms → cellular organisms → Bacteria → Nitrospirae	1.72 %
unclassified Bryobacteraceae	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → unclassified Bryobacteraceae	0.86 %
Candidatus Angelobacter sp. Gp1-AA117	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Angelobacter → unclassified Candidatus Angelobacter → Candidatus Angelobacter sp. Gp1-AA117	0.86 %
Bryobacterales bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → unclassified Bryobacterales → Bryobacterales bacterium	0.86 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	0.86 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	24.14 %
Candidatus Solibacter usitatus	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	14.66 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3.45 %
Candidatus Accumulibacter sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Betaproteobacteria incertae sedis → Candidatus Accumulibacter → unclassified Candidatus Accumulibacter → Candidatus Accumulibacter sp.	1.72 %
unclassified Candidatus Sulfopaludibacter	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter	1.72 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1.72 %
Nitrospirae	phylum	All Organisms → cellular organisms → Bacteria → Nitrospirae	1.72 %
Bryobacteraceae bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → unclassified Bryobacteraceae → Bryobacteraceae bacterium	0.86 %
Candidatus Angelobacter sp. Gp1-AA117	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Angelobacter → unclassified Candidatus Angelobacter → Candidatus Angelobacter sp. Gp1-AA117	0.86 %
Bryobacterales bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → unclassified Bryobacterales → Bryobacterales bacterium	0.86 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	0.86 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	24.14 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3.45 %
Candidatus Sulfopaludibacter sp. SbA3	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter → Candidatus Sulfopaludibacter sp. SbA3	1.72 %
Candidatus Accumulibacter sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Betaproteobacteria incertae sedis → Candidatus Accumulibacter → unclassified Candidatus Accumulibacter → Candidatus Accumulibacter sp.	1.72 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1.72 %
Nitrospirae	phylum	All Organisms → cellular organisms → Bacteria → Nitrospirae	1.72 %
Candidatus Solibacter usitatus Ellin6076	isolate	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus → Candidatus Solibacter usitatus Ellin6076	0.86 %
Bryobacteraceae bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → unclassified Bryobacteraceae → Bryobacteraceae bacterium	0.86 %
Candidatus Angelobacter sp. Gp1-AA117	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Angelobacter → unclassified Candidatus Angelobacter → Candidatus Angelobacter sp. Gp1-AA117	0.86 %
Bryobacterales bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → unclassified Bryobacterales → Bryobacterales bacterium	0.86 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	0.86 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000364\|INPhiseqgaiiFebDRAFT_105676840	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter	1193	Open in IMG/M
3300000364\|INPhiseqgaiiFebDRAFT_105834191	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	2178	Open in IMG/M
3300002245\|JGIcombinedJ26739_100252789	All Organisms → cellular organisms → Bacteria	1650	Open in IMG/M
3300004092\|Ga0062389_100782225	Not Available	1133	Open in IMG/M
3300004092\|Ga0062389_104364393	Not Available	532	Open in IMG/M
3300005329\|Ga0070683_101881732	Not Available	575	Open in IMG/M
3300005331\|Ga0070670_100972301	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Betaproteobacteria incertae sedis → Candidatus Accumulibacter → unclassified Candidatus Accumulibacter → Candidatus Accumulibacter sp.	771	Open in IMG/M
3300005338\|Ga0068868_100850821	All Organisms → cellular organisms → Bacteria → Proteobacteria	826	Open in IMG/M
3300005344\|Ga0070661_101389812	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter → Candidatus Sulfopaludibacter sp. SbA3	590	Open in IMG/M
3300005445\|Ga0070708_101942939	All Organisms → cellular organisms → Bacteria → Acidobacteria	545	Open in IMG/M
3300005538\|Ga0070731_10025907	All Organisms → cellular organisms → Bacteria → Acidobacteria	4010	Open in IMG/M
3300005542\|Ga0070732_10532494	All Organisms → cellular organisms → Bacteria → Nitrospirae	712	Open in IMG/M
3300005544\|Ga0070686_101697997	All Organisms → cellular organisms → Bacteria	536	Open in IMG/M
3300005615\|Ga0070702_100152985	All Organisms → cellular organisms → Bacteria	1483	Open in IMG/M
3300005617\|Ga0068859_101952839	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter → Candidatus Sulfopaludibacter sp. SbA3	648	Open in IMG/M
3300005618\|Ga0068864_101612430	Not Available	653	Open in IMG/M
3300005842\|Ga0068858_100282752	All Organisms → cellular organisms → Bacteria	1580	Open in IMG/M
3300006176\|Ga0070765_101739380	Not Available	585	Open in IMG/M
3300006237\|Ga0097621_101943087	All Organisms → cellular organisms → Bacteria	562	Open in IMG/M
3300009098\|Ga0105245_12193727	All Organisms → cellular organisms → Bacteria → Acidobacteria	606	Open in IMG/M
3300009174\|Ga0105241_10179430	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus → Candidatus Solibacter usitatus Ellin6076	1755	Open in IMG/M
3300009174\|Ga0105241_12061960	Not Available	563	Open in IMG/M
3300009176\|Ga0105242_10216455	All Organisms → cellular organisms → Bacteria	1709	Open in IMG/M
3300009176\|Ga0105242_10583232	All Organisms → cellular organisms → Bacteria	1077	Open in IMG/M
3300009176\|Ga0105242_10898304	Not Available	886	Open in IMG/M
3300009545\|Ga0105237_10546656	Not Available	1165	Open in IMG/M
3300009638\|Ga0116113_1022876	All Organisms → cellular organisms → Bacteria	1382	Open in IMG/M
3300010335\|Ga0134063_10770568	All Organisms → cellular organisms → Bacteria	502	Open in IMG/M
3300010375\|Ga0105239_11380521	Not Available	813	Open in IMG/M
3300010379\|Ga0136449_102595253	All Organisms → cellular organisms → Bacteria → Acidobacteria	723	Open in IMG/M
3300010401\|Ga0134121_12680369	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	543	Open in IMG/M
3300010403\|Ga0134123_12494871	Not Available	583	Open in IMG/M
3300011271\|Ga0137393_10110576	Not Available	2255	Open in IMG/M
3300012930\|Ga0137407_11037725	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	777	Open in IMG/M
3300012984\|Ga0164309_11163631	All Organisms → cellular organisms → Bacteria → Acidobacteria	645	Open in IMG/M
3300012988\|Ga0164306_11129786	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	653	Open in IMG/M
3300013297\|Ga0157378_10760372	All Organisms → cellular organisms → Bacteria → Acidobacteria	992	Open in IMG/M
3300013297\|Ga0157378_12389552	Not Available	580	Open in IMG/M
3300014167\|Ga0181528_10357871	Not Available	793	Open in IMG/M
3300014325\|Ga0163163_10715837	All Organisms → cellular organisms → Bacteria → Acidobacteria	1065	Open in IMG/M
3300014495\|Ga0182015_10969167	All Organisms → cellular organisms → Bacteria	529	Open in IMG/M
3300014499\|Ga0182012_10365641	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales	958	Open in IMG/M
3300014499\|Ga0182012_10891363	Not Available	561	Open in IMG/M
3300014654\|Ga0181525_10192680	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1114	Open in IMG/M
3300014745\|Ga0157377_11738726	All Organisms → cellular organisms → Bacteria	504	Open in IMG/M
3300015374\|Ga0132255_104082959	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	619	Open in IMG/M
3300017939\|Ga0187775_10155318	All Organisms → cellular organisms → Bacteria → Acidobacteria	818	Open in IMG/M
3300018026\|Ga0187857_10342111	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	679	Open in IMG/M
3300018034\|Ga0187863_10202344	All Organisms → cellular organisms → Bacteria	1105	Open in IMG/M
3300021170\|Ga0210400_10695580	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	836	Open in IMG/M
3300021178\|Ga0210408_10819517	All Organisms → cellular organisms → Bacteria	728	Open in IMG/M
3300021401\|Ga0210393_10394650	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1128	Open in IMG/M
3300021401\|Ga0210393_11323034	Not Available	577	Open in IMG/M
3300021475\|Ga0210392_10087179	All Organisms → cellular organisms → Bacteria → Acidobacteria	2024	Open in IMG/M
3300021477\|Ga0210398_10298970	All Organisms → cellular organisms → Bacteria	1313	Open in IMG/M
3300021477\|Ga0210398_11191149	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	602	Open in IMG/M
3300021478\|Ga0210402_10891045	All Organisms → cellular organisms → Bacteria	816	Open in IMG/M
3300021479\|Ga0210410_10652011	All Organisms → cellular organisms → Bacteria → Acidobacteria	932	Open in IMG/M
3300021559\|Ga0210409_10642432	All Organisms → cellular organisms → Bacteria	931	Open in IMG/M
3300021559\|Ga0210409_11697658	All Organisms → cellular organisms → Bacteria	508	Open in IMG/M
3300021560\|Ga0126371_12932178	All Organisms → cellular organisms → Bacteria → Acidobacteria	578	Open in IMG/M
3300022525\|Ga0242656_1001811	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Angelobacter → unclassified Candidatus Angelobacter → Candidatus Angelobacter sp. Gp1-AA117	2175	Open in IMG/M
3300023250\|Ga0224544_1044269	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	636	Open in IMG/M
3300025414\|Ga0208935_1002267	All Organisms → cellular organisms → Bacteria → Acidobacteria	3026	Open in IMG/M
3300025916\|Ga0207663_11571576	Not Available	529	Open in IMG/M
3300025927\|Ga0207687_10425211	All Organisms → cellular organisms → Bacteria → Acidobacteria	1097	Open in IMG/M
3300025928\|Ga0207700_10431449	All Organisms → cellular organisms → Bacteria	1159	Open in IMG/M
3300025928\|Ga0207700_10972579	All Organisms → cellular organisms → Bacteria → Acidobacteria	760	Open in IMG/M
3300025934\|Ga0207686_11074090	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	655	Open in IMG/M
3300025938\|Ga0207704_10746628	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	814	Open in IMG/M
3300026088\|Ga0207641_10801532	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	932	Open in IMG/M
3300026555\|Ga0179593_1206837	All Organisms → cellular organisms → Bacteria	2730	Open in IMG/M
3300027080\|Ga0208237_1064921	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	537	Open in IMG/M
3300027745\|Ga0209908_10150133	All Organisms → cellular organisms → Bacteria	613	Open in IMG/M
3300027812\|Ga0209656_10029683	All Organisms → cellular organisms → Bacteria	3256	Open in IMG/M
3300027842\|Ga0209580_10358680	All Organisms → cellular organisms → Bacteria → Nitrospirae	726	Open in IMG/M
3300028381\|Ga0268264_11593199	All Organisms → cellular organisms → Bacteria	664	Open in IMG/M
3300028560\|Ga0302144_10073095	Not Available	1098	Open in IMG/M
3300028860\|Ga0302199_1121511	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	830	Open in IMG/M
3300028906\|Ga0308309_11846014	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	510	Open in IMG/M
3300029910\|Ga0311369_11290709	Not Available	559	Open in IMG/M
3300029911\|Ga0311361_10609451	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → unclassified Bryobacterales → Bryobacterales bacterium	1037	Open in IMG/M
3300029911\|Ga0311361_10669010	All Organisms → cellular organisms → Bacteria	963	Open in IMG/M
3300029911\|Ga0311361_10909223	All Organisms → cellular organisms → Bacteria	755	Open in IMG/M
3300029917\|Ga0311326_10465908	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	620	Open in IMG/M
3300029952\|Ga0311346_10630094	All Organisms → cellular organisms → Bacteria	951	Open in IMG/M
3300029999\|Ga0311339_10406623	All Organisms → cellular organisms → Bacteria	1417	Open in IMG/M
3300029999\|Ga0311339_11886507	All Organisms → cellular organisms → Bacteria → Acidobacteria	516	Open in IMG/M
3300030007\|Ga0311338_11488118	Not Available	625	Open in IMG/M
3300030011\|Ga0302270_10697317	Not Available	514	Open in IMG/M
3300030020\|Ga0311344_11438421	Not Available	503	Open in IMG/M
3300030058\|Ga0302179_10393989	Not Available	610	Open in IMG/M
3300030399\|Ga0311353_10002016	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	28670	Open in IMG/M
3300030506\|Ga0302194_10254112	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	707	Open in IMG/M
3300030509\|Ga0302183_10282543	Not Available	642	Open in IMG/M
3300030518\|Ga0302275_10295502	All Organisms → cellular organisms → Bacteria	894	Open in IMG/M
3300030580\|Ga0311355_10660339	All Organisms → cellular organisms → Bacteria	978	Open in IMG/M
3300030618\|Ga0311354_11756801	All Organisms → cellular organisms → Bacteria → Acidobacteria	540	Open in IMG/M
3300031028\|Ga0302180_10649286	All Organisms → cellular organisms → Bacteria	504	Open in IMG/M
3300031231\|Ga0170824_114948242	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Betaproteobacteria incertae sedis → Candidatus Accumulibacter → unclassified Candidatus Accumulibacter → Candidatus Accumulibacter sp.	779	Open in IMG/M
3300031233\|Ga0302307_10545473	Not Available	586	Open in IMG/M
3300031236\|Ga0302324_100108713	All Organisms → cellular organisms → Bacteria → Proteobacteria	4670	Open in IMG/M
3300031236\|Ga0302324_100900605	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	1216	Open in IMG/M
3300031236\|Ga0302324_100977679	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales	1154	Open in IMG/M
3300031236\|Ga0302324_101221067	All Organisms → cellular organisms → Bacteria	1000	Open in IMG/M
3300031524\|Ga0302320_11762502	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	593	Open in IMG/M
3300031525\|Ga0302326_10334299	All Organisms → cellular organisms → Bacteria → Acidobacteria	2394	Open in IMG/M
3300031718\|Ga0307474_11480509	Not Available	534	Open in IMG/M
3300031740\|Ga0307468_101693453	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	595	Open in IMG/M
3300031788\|Ga0302319_11760994	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → unclassified Bryobacteraceae → Bryobacteraceae bacterium	537	Open in IMG/M
3300031788\|Ga0302319_11887452	Not Available	512	Open in IMG/M
3300031938\|Ga0308175_102174165	All Organisms → cellular organisms → Bacteria → Acidobacteria	622	Open in IMG/M
3300032739\|Ga0315741_10489064	Not Available	995	Open in IMG/M
3300033158\|Ga0335077_11097556	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	786	Open in IMG/M
3300033475\|Ga0310811_10430623	All Organisms → cellular organisms → Bacteria	1424	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	78.45%
Host-Associated	Host-Associated	21.55%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	70.69%
Plants	Host-Associated → Plants	21.55%
Aquatic	Environmental → Aquatic	7.76%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	43.10%
Peat	Environmental → Terrestrial → Peat	27.59%
Rhizosphere	Host-Associated → Plants → Rhizosphere	12.93%
Freshwater	Environmental → Aquatic → Freshwater	7.76%
Rhizoplane	Host-Associated → Plants → Rhizoplane	6.90%
Roots	Host-Associated → Plants → Roots	1.72%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	28.45%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	27.59%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	11.21%
Loam	Environmental → Terrestrial → Soil → Loam	9.48%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	7.76%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	6.03%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	5.17%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	1.72%
Soil	Host-Associated → Plants → Rhizosphere → Soil	1.72%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.86%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	27.59%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	13.79%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	12.07%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	11.21%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	6.03%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	6.03%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	6.03%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	3.45%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	3.45%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	1.72%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	1.72%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	1.72%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	1.72%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	1.72%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	0.86%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.86%

Habitat	Taxonomy	Distribution
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	14.66%
Bog	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Bog	12.07%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	10.34%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	5.17%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	4.31%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	4.31%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	3.45%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	2.59%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.59%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	2.59%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	2.59%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	2.59%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	1.72%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	1.72%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	1.72%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.72%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	1.72%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	1.72%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.72%
Bog	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Bog	1.72%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	1.72%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	1.72%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	1.72%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	0.86%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	0.86%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	0.86%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	0.86%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.86%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	0.86%
Thawing Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Thawing Permafrost	0.86%
Palsa	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Palsa	0.86%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	0.86%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.86%
Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Soil	0.86%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.86%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	0.86%
Switchgrass Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere	0.86%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.86%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.86%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300004092	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300005329	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG	Environmental	Open in IMG/M
3300005331	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG	Host-Associated	Open in IMG/M
3300005338	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2	Host-Associated	Open in IMG/M
3300005344	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG	Host-Associated	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005538	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1	Environmental	Open in IMG/M
3300005542	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1	Environmental	Open in IMG/M
3300005544	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG	Environmental	Open in IMG/M
3300005615	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG	Environmental	Open in IMG/M
3300005617	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2	Host-Associated	Open in IMG/M
3300005618	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2	Host-Associated	Open in IMG/M
3300005842	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2	Host-Associated	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300006237	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2)	Host-Associated	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009174	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG	Host-Associated	Open in IMG/M
3300009176	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG	Host-Associated	Open in IMG/M
3300009545	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG	Host-Associated	Open in IMG/M
3300009638	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_10_10	Environmental	Open in IMG/M
3300010335	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09082015	Environmental	Open in IMG/M
3300010375	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG	Host-Associated	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300010401	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1	Environmental	Open in IMG/M
3300010403	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3	Environmental	Open in IMG/M
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012984	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MG	Environmental	Open in IMG/M
3300012988	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_242_MG	Environmental	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300014167	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin10_10_metaG	Environmental	Open in IMG/M
3300014325	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG	Host-Associated	Open in IMG/M
3300014495	Permafrost microbial communities from Stordalen Mire, Sweden - 712P3M metaG	Environmental	Open in IMG/M
3300014499	Permafrost microbial communities from Stordalen Mire, Sweden - 612S2S metaG	Environmental	Open in IMG/M
3300014654	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin06_10_metaG	Environmental	Open in IMG/M
3300014745	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300017939	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP12_10_MG	Environmental	Open in IMG/M
3300018026	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_100	Environmental	Open in IMG/M
3300018034	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_11_10	Environmental	Open in IMG/M
3300021170	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300021401	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-O	Environmental	Open in IMG/M
3300021475	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-O	Environmental	Open in IMG/M
3300021477	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-O	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300021479	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-M	Environmental	Open in IMG/M
3300021559	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300022525	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-4-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300023250	Peat soil microbial communities from Stordalen Mire, Sweden - 717 P1 10-14	Environmental	Open in IMG/M
3300025414	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_6_10 (SPAdes)	Environmental	Open in IMG/M
3300025916	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025927	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025934	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025938	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026088	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026555	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300027080	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF009 (SPAdes)	Environmental	Open in IMG/M
3300027745	Thawing permafrost microbial communities from the Arctic, studying carbon transformations - Permafrost 812P2M	Environmental	Open in IMG/M
3300027812	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM2 (SPAdes)	Environmental	Open in IMG/M
3300027842	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300028381	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028560	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_E2_2	Environmental	Open in IMG/M
3300028860	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_N2_3	Environmental	Open in IMG/M
3300028906	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)	Environmental	Open in IMG/M
3300029910	III_Palsa_E2 coassembly	Environmental	Open in IMG/M
3300029911	III_Bog_N2 coassembly	Environmental	Open in IMG/M
3300029917	I_Bog_E1 coassembly	Environmental	Open in IMG/M
3300029943	I_Palsa_N3 coassembly	Environmental	Open in IMG/M
3300029952	II_Bog_N3 coassembly	Environmental	Open in IMG/M
3300029999	I_Palsa_E3 coassembly	Environmental	Open in IMG/M
3300030007	I_Palsa_E1 coassembly	Environmental	Open in IMG/M
3300030011	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Bog_E2_3	Environmental	Open in IMG/M
3300030020	II_Bog_N1 coassembly	Environmental	Open in IMG/M
3300030058	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_E3_1	Environmental	Open in IMG/M
3300030399	II_Palsa_E2 coassembly	Environmental	Open in IMG/M
3300030506	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_N1_1	Environmental	Open in IMG/M
3300030509	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_N3_2	Environmental	Open in IMG/M
3300030518	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Bog_N2_2	Environmental	Open in IMG/M
3300030580	II_Palsa_N1 coassembly	Environmental	Open in IMG/M
3300030618	II_Palsa_E3 coassembly	Environmental	Open in IMG/M
3300031028	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_E3_2	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031233	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_E3_2	Environmental	Open in IMG/M
3300031236	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_1	Environmental	Open in IMG/M
3300031524	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Bog_T0_3	Environmental	Open in IMG/M
3300031525	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_3	Environmental	Open in IMG/M
3300031718	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300031788	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Bog_T0_2	Environmental	Open in IMG/M
3300031938	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R1	Environmental	Open in IMG/M
3300032739	Forest Soil Metatranscriptomics Site 2 LB Combined Assembly	Environmental	Open in IMG/M
3300033158	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.1	Environmental	Open in IMG/M
3300033475	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YC	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
INPhiseqgaiiFebDRAFT_1056768401	3300000364	Soil	MRRPPPPQLLGFLTAYDPTIADMALALREIILDEVPDASESIYQVYTIAIWFGFSGKMKDMFCYIATNAK
INPhiseqgaiiFebDRAFT_1058341911	3300000364	Soil	MERPPDPQLLGFLEVYDQHISDLALALREVILEEAPDASESIYQVYTVAIWFGFSGKMKDMFCYIATNAGHVN
JGIcombinedJ26739_1002527891	3300002245	Forest Soil	MQRPPDPQLLGFLEAYDRHISDLALALREVILEEAPDASESIYQVYTVAIWFGFSGKMKDMFCYIATNAGHV
Ga0062389_1007822252	3300004092	Bog Forest Soil	MRRPPDPLLLGFLEAYDRHVSEVALALREMVLEEAPDASESVYRVYTVAIWFGFSGKMKDMFC
Ga0062389_1043643932	3300004092	Bog Forest Soil	MRRPPDPLLLTFLEAYERPIANLALALREIILEEVPDAFESIYRVYTVAIWFGFGGK*
Ga0070683_1018817322	3300005329	Corn Rhizosphere	MIGRSMERPPHRQLLGFLKAYDPHIAELALALREIILEEAPDASESIYQVYTVAIWFGFSGKMKDMFCYIATS
Ga0070670_1009723011	3300005331	Switchgrass Rhizosphere	MRRPPDPQLLGFLTTYDRTIADLALALRGIIIEEAPNASEYVYQVYTVAIWFGFTGKMK
Ga0068868_1008508213	3300005338	Miscanthus Rhizosphere	VRRPPDPQLLGFLEAYDRPISDLALALREIILEEAPDASESIYQVYTVAIWFGFSGKTKDMFC
Ga0070661_1013898121	3300005344	Corn Rhizosphere	VRRPPDPQLLGFLEAYDRPISDLALALREIILQEAPDASESIYQVYTVAIWFGFSGK
Ga0070708_1019429391	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MARRPPNPQLLGFLEAYDRPISDLALALRQIILEEAPDASESIYQVYTVAIWFGFSGKMKDMFC
Ga0070731_100259076	3300005538	Surface Soil	MERPPDPQLIGFLGAYDSHISGLALALRQIILEEAPDASESIYQVYTVAVWFGFSGK
Ga0070732_105324941	3300005542	Surface Soil	MRRPPDPQLLGFLAAYDRHISELALALREVILEEVPDALESIYQVYTVAIWFGFTGKMKDMFCYI
Ga0070686_1016979972	3300005544	Switchgrass Rhizosphere	MQRPPHPQLLGFLKAYDLHIADLALALREVVLEEAPDASESIYQVYTVAIWFGFSGKMKDMFCYITTSTGHV
Ga0070702_1001529853	3300005615	Corn, Switchgrass And Miscanthus Rhizosphere	MTSPLKRRPPDPQLLSFLTGYDRTIADLALALREIILEERPDASESIYRVYTIAIWFGFSGKMKDMFCYIT
Ga0068859_1019528391	3300005617	Switchgrass Rhizosphere	VRRPPHPQLLGFLEAYDRSISDLALALREIILQEAPDAAESIYQVYTVAIWFGFSGKMKDMFCYI
Ga0068864_1016124302	3300005618	Switchgrass Rhizosphere	MTSPIQRRPPNPHLLGFLTAYDRTIADLALALRELILEEVPDASESIYRVYTVAIWFGFSGKMKDMFCYIA
Ga0068858_1002827523	3300005842	Switchgrass Rhizosphere	VRRPPHPQLLGFLEAYDRPISDLALALREIVLEEAPDACESIYQVYTVAIWFGFSEKMKDMFCYITTH
Ga0070765_1017393802	3300006176	Soil	MRRPPDPLLLGFLEAYDRPIADLALALREIILEEVPDASESIYQVYTVAIWFGFSGRM
Ga0097621_1019430871	3300006237	Miscanthus Rhizosphere	MVGIGRVMRRPPDPQLLGFLAAYDPTIADLALALREIILEEAPYSSESIYQVYTVAIWFGFSGKMKDMFCYI
Ga0105245_121937271	3300009098	Miscanthus Rhizosphere	MARRPPNPQLLGFLEAYNRPISALALALRQIILEEAPDASESIYQVYTVAIWFGFSGKMKDM
Ga0105241_101794303	3300009174	Corn Rhizosphere	VRRPPDPQLLSFLEAYDRPISDLALALREIILQEAPDASESIYQVYTVAIWFGFSGKMKDMFCYITTH
Ga0105241_120619601	3300009174	Corn Rhizosphere	MERPPHRQLLGFLKAYDPHIAELALALREIILEEAPDASESIYQVYTVAIWFG
Ga0105242_102164551	3300009176	Miscanthus Rhizosphere	MRRPPDPQLLGFLTTYDRTIADLALALRGIIIEEAPNASEYVYQVYTVAIWF
Ga0105242_105832321	3300009176	Miscanthus Rhizosphere	VRRPPHPQLLDFLEAYDRPISDLALALREVILQEAPDASESIYQVYTVAIWFG
Ga0105242_108983042	3300009176	Miscanthus Rhizosphere	VRRPPHPQLLGFLTAYDRSIADLALALRELILEEQPDASESVYQVYTVGIWFGFSG
Ga0105237_105466561	3300009545	Corn Rhizosphere	MRRPDPQLLGYLTAYDRTIADLALALREIILEEAPDASESIYRVYTVAIWFGFSGKMKDMFCY
Ga0116113_10228761	3300009638	Peatland	MPDSLKRRPPDPQLLGFLEAYDRHISELGLALREIILEQAPDASESIYQVYTVAIWFGFSGKMKDMFCYIATN
Ga0134063_107705681	3300010335	Grasslands Soil	MQRPPDPQLLGFLEAYGRHISDLALALREVILEEVPDASESIYQVYTVAIWFGFSGKMKDISGEFGFGFG*
Ga0105239_113805212	3300010375	Corn Rhizosphere	MPGPTKRRPPDTQLLGFLTDYDRTIADLALALREIILEEAPDASESIYQVYTVAVWFGFS
Ga0136449_1025952532	3300010379	Peatlands Soil	MHRPPDPQLLGFLEAYDRHIADLALALREVILEEAPDASESIYQVYTVAIWFGFSGKMKDMFCYIAT
Ga0134121_126803692	3300010401	Terrestrial Soil	VRRPPHPQLLGFLTAYDRTIADMALALREIILEEQPDASESVYQVYTVAIWFGFSGKMKDMFCYITT
Ga0134123_124948712	3300010403	Terrestrial Soil	MRRPPPPQLLGFLAAYDPSIADMALALREIILDEVPDASESIYQVYTVAIWFGFSGKMKDMFCYIATNAK
Ga0137393_101105762	3300011271	Vadose Zone Soil	MEFQYIFSPAMRRPPDPQLLGFLDACDRHIADLVLALPEIILEEVPDASESIFDLSGHQVYTVAIWFGFSGKMKDMFCYIAGNARH
Ga0137407_110377252	3300012930	Vadose Zone Soil	VRRPPHLQLLGFLTAYDRTIADLALALREIILEEQPDASESVYQVYTVAIWFGFSGKMK
Ga0164309_111636312	3300012984	Soil	MKRRPPDPRLLDFLTAYDRTIADLALALREIILEEQPDASESVYQVYTVAIWFGF
Ga0164306_111297862	3300012988	Soil	VRRPPHPQLLGFLEAYDRPISDLALALREIVLEEAPDACESIYQVYTVAIWFGFSE
Ga0157378_107603723	3300013297	Miscanthus Rhizosphere	MASPLLRRPPDPQLLGYLAAYDRTIADLALALREIILDEAPSASESVYQVYTVAIWFGFS
Ga0157378_123895522	3300013297	Miscanthus Rhizosphere	MRRPPPPQLLGFLTASDPTIADMALALREIILDEVPDAAESIYQVYTVAIWFGFSGKMKDMFCYIATN
Ga0181528_103578711	3300014167	Bog	MAKEGFTYIQTMTRPPDPQLLGFLEAYDRPIAELALALREIILEEVPDASESIYQVYTVAIWFGFSGKMKDM
Ga0163163_107158371	3300014325	Switchgrass Rhizosphere	VRRPPHPQLLGFLTAYDRTIADLALALREIILEEQPDASESVYQVYTVAIWFGFSGKMKDMFCYITTH
Ga0182015_109691671	3300014495	Palsa	MQRPPDPQLIGFLEAYDRHILELALALREVILEEAPDASESIYQVYTVAIWFGFSGKMKDMFCYIATSADHVN
Ga0182012_103656411	3300014499	Bog	MRRPPDPQLIGFLEAYDRTIADLALALREIILEEVPDASESIYQVYTVAIWFGFSEKMKDMFCYIATNARHINLG
Ga0182012_108913632	3300014499	Bog	MRRPPDPQLIGFLEAYDRPIADLALALREIVLEEVPDASESIYQVYTVAIWFGFSEKMKDMFCYI
Ga0181525_101926802	3300014654	Bog	LLGFLEAYDRHISDLALALREVILEEAPDASESIYRVYTVAIWFGFSGKMKDMFCYIATN
Ga0157377_117387262	3300014745	Miscanthus Rhizosphere	MRRPDPQLLGYLTAYDRTIADLALALREIILEEAPDASESIYRVYTVAIWFGFSGKTKDMFCYITTHARHI
Ga0132255_1040829592	3300015374	Arabidopsis Rhizosphere	LLLFLEAYDPHISDLALALREIVLEEAPDASESIYQVYTVAIWFGFSGKMKD
Ga0187775_101553181	3300017939	Tropical Peatland	MERPADPQLIGFLESYDRHIADIALALREIILEEVPDASGSIYQVYTVAIWFGFSGKMKDMFCYIATNAAHVNLG
Ga0187857_103421111	3300018026	Peatland	MQRPPDPQLLGFLEAYDRHISDLALALREVILEEAPDASESIYQVYTVAIWFGFSGKMKDMF
Ga0187863_102023441	3300018034	Peatland	MPDSLKRRPPDPQLLGFLEAYDRHISELALALREIILEQAPDASESIYQVYTVAIWFGFSGKMKDMF
Ga0210400_106955802	3300021170	Soil	MERPPDPKLLEFLDAYDRHISDLALALREIILEEAPDASESIYRVYTVAIWFGFSGKMKDMFCYIT
Ga0210408_108195172	3300021178	Soil	MERPPHPQLIGFLEAYDRHIAELALALREMILEEAPDASESIYQVYTVAIWFGFSGKMKDMFCYLTTHAGHVNL
Ga0210393_103946502	3300021401	Soil	MYIQTMNRPPDPQLLGFLEAYDRHIAELALALREIILEEVPDASESIYQVYTVAIWFGFSGKMKDMFCYIATNARHI
Ga0210393_113230341	3300021401	Soil	MRRPPDPQLLGFLEAYDRHISDLALALREIVLEESPDASESIYQVYTVAIWFGFSGKMKDMFCY
Ga0210392_100871791	3300021475	Soil	MRRVSLYSRSMRPPDPQLIGFLEAYDRHIANLALALREVILEEMPDASESVYQVYTVAIWFGFTGKMKDMFCYIATNAAHIN
Ga0210398_102989703	3300021477	Soil	VHRPPDPQLLGFLSAYDRPVADMALALREIILEEAPDASESIYQVYTVAIWFGFSGKMKD
Ga0210398_111911491	3300021477	Soil	MERPPDPQLLGFLEAYDRHISDLVLALREVILDEAPDASESIYQVYTVAIWFGFSGK
Ga0210402_108910452	3300021478	Soil	MARRPPDPQLLGFLEAYDRPISNLALALREIILEEAPNASESIYQVYTVAIWF
Ga0210410_106520113	3300021479	Soil	MPGTQVDIFPVTVDRPPIPELLGFLAAYDPSIADLALALRQVVLEEAPDASESIYQVYTVAIWFGFSDKMKDMFCYITTH
Ga0210409_106424323	3300021559	Soil	MPRPPARELLGYLAAWDRPIAAMALALREIVLEEAPDAVEKVYQTYTTAIWFGFSPKMKDMF
Ga0210409_116976582	3300021559	Soil	MERPPHPQLIGFLEAYDRHIAELALALREMILEEAPDASESIYQVYTVAIWFGFS
Ga0126371_129321782	3300021560	Tropical Forest Soil	MNRPPDPRLIGFLEAYDRHIADLALALREIVLEEVPDASESVYQVYTVAIWF
Ga0242656_10018111	3300022525	Soil	MQRAPDPQLLGFLQAYDRHISDLALALREVILEEAPDASESIYQVYTVAIWFGFSGKMKDMF
Ga0224544_10442691	3300023250	Soil	MQRPPDPQLLGFLEAYDRHISDLALALREVILEEAPDASESIYQVYTVAIWFGFSGKMKDMFCYIATNAGHINLGFPRGS
Ga0208935_10022671	3300025414	Peatland	MRRPPDPQLLGFLEAYDRPIADLALALREIILEEVPEASESIYQVYTVAIWFGFSGKMKDMFCYIATNAG
Ga0207663_115715762	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	MTNPIKRRSPDPQLLGFLTAYDRTIADLALALREIILEEAPGASESVYQVYTVAIWFGFSGKTNDMFCYITTHA
Ga0207687_104252111	3300025927	Miscanthus Rhizosphere	VRRPPHPQLLGFLEAYDRSISDLALALREIILQEAPDAAESIYQVYTVAIWFGFSGKMKDMFCYIT
Ga0207700_104314491	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	MTNPIKRRSPDPQLLGFLTAYDRTIADLALALREIILEEAPGASESVYQVYTVAIWFGFSGR
Ga0207700_109725791	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	MRMRRPPDPQLLGFLEAYDPHIADLALGLREIVLEEAPDASESVYQVYTVAIWFGFSGKM
Ga0207686_110740901	3300025934	Miscanthus Rhizosphere	VRRPPHPQLLGFLEAYDRPISNLALALREIILQEAPDASESIYQVYTVAIWFGF
Ga0207704_107466281	3300025938	Miscanthus Rhizosphere	MRRPPPPQLLGFLAAYDPSIADMALALREIILDEVPDASESVYQVYTVAIWFGFSGKMKDMFCYIATNAKHINL
Ga0207641_108015321	3300026088	Switchgrass Rhizosphere	VRRPPHPQLLGFLEAYDRPISDLALALREIVLEEAPDACESIYQVYTVAIWFGFSEKMKDMF
Ga0179593_12068373	3300026555	Vadose Zone Soil	MRRPPDPQLLGFLEAYDHPIADLALALREIILEEVSDASESIYQVYTIAIWFGSAAR
Ga0208237_10649211	3300027080	Forest Soil	MQRPPDPQLLGFLEAYDRHISDLALALREVILDEAPDASESIYQVYTVAIWFGFSGKMKDMFCYIATNAGHINLGFPR
Ga0209908_101501331	3300027745	Thawing Permafrost	MERPPDPQLLGFLEAYDRHISDLALALREVILEEAPDASESIYQVYTVAIWFG
Ga0209656_100296835	3300027812	Bog Forest Soil	MTKRRPPDPQLLGFLEAYDRHISELALALREIILEEAPDASESIYQVYTVAIWFGFSGKMKDMFCYIATNA
Ga0209580_103586802	3300027842	Surface Soil	MRRPPDPQLLGFLAAYDRHISELALALREVILEEVPDALESIYQVYTVAIWFGFTGKMKDMFCYIATNTG
Ga0268264_115931991	3300028381	Switchgrass Rhizosphere	MQRPPHPQLLGFLKAYDRHISDLALALREVILEEFPDASESIYQVYTVAIWFGFSGKMKDMFCYI
Ga0302144_100730952	3300028560	Bog	MQRRPPDPQLLGFLEAYDRNISDLVLALREVILEEAPDASESIYQVYTVAIWFGFSGKMKDMFCYIATNARQVNLGF
Ga0302199_11215111	3300028860	Bog	MRRPPDPQLIGFLEAYDRTIADLALALREIILEEVPDASESIYQVYTVAIWFGFSEKMKDMFCYIA
Ga0308309_118460141	3300028906	Soil	MQRPPDPQLLGFLEAYDRHISDLALALRQVILEEAPDASESIYQVYTVAIWFGFSGKMKDMFCYIAT
Ga0311369_112907092	3300029910	Palsa	MQRPPDPQLLGFLEAYERPIADLALALREIVLEEVPDASESIYQVYTVAIWFGFSGKMKDMFCYIATNARHINLGFPR
Ga0311361_106094512	3300029911	Bog	MQRPPDPQLLGFLEDYDRPIIDLALALREIILEEVPDAAESIYQVYTVAIWFGFSEKMKDMF
Ga0311361_106690102	3300029911	Bog	MTRPPLPQLLSFLDAYDPHVADLALALREIILEEVPDASESIYQVYTVAIWFGFSEKMKDMFCYITTHEGHINLGFP
Ga0311361_109092232	3300029911	Bog	MQRPPDPELLGFLEAYDRHIAELALALREVILEEVPDASESIYQVYTVAIWFGFSGKMKDMFCYIATNADHVN
Ga0311326_104659081	3300029917	Bog	MQRRPPDPQLLGFLEAYDRNISDLVLALREVILEEAPDASESIYQVYTVAIWFGFSGKMKDMFC
Ga0311340_112097072	3300029943	Palsa	MQRPPDPQLLGFLEAYDRHISDLALALREVILEEAPDASESIYQVYTVAIW
Ga0311346_106300942	3300029952	Bog	MRRPPDPQLTLFLEAYDRPIVDLALALREIILEEVPDASESIYRTYTVAIWFGFSEKMKDMFCYIATNARHINLGFPRGS
Ga0311339_104066233	3300029999	Palsa	VRLDCGPREFRCIFSAIMRRPPDPQLLGFLEAYDRHISDLALALREIVLDEAPDASESVYQVYTVAIWFGFSGKM
Ga0311339_118865072	3300029999	Palsa	MRRPPDPQLLGFLEVYDRHISELALALREVILEEVPDASESIYQVYTVAIWFGFSGNMKDMFC
Ga0311338_114881181	3300030007	Palsa	MQRPPDPQLLGFLEAYDRHISDLALALREVILEEAPDASESIYQVYTVAIWFGFSGKMKD
Ga0302270_106973172	3300030011	Bog	MRRPPDPQLTLFLEAYDRPIVDLALALREIILEEVPDASESIYRTYTVAIWFGFSEKMKDMFCYIATNAR
Ga0311344_114384211	3300030020	Bog	MRRPPDPQLIGFLEAYDRPIADLALALREIILEEVPDACESIYQVYTVAIWFGFSEKMKD
Ga0302179_103939892	3300030058	Palsa	MQRPPDPQLLGFLEAYERPIADLALALREIVLEEVPDASESIYQVYTVAIWFGFS
Ga0311353_100020161	3300030399	Palsa	MQRPPDPQLLEFLEAYDRHISDLALALREVILEEAPDASESIYQVYTVAIWFGFSGKMKDMFCYIAT
Ga0302194_102541121	3300030506	Bog	MQRRPPDPQLLGFLEAYDRNISDLVLALREVILEEAPDASESIYQVYTVAIWFGFSGKMKDMFCYIATNARHV
Ga0302183_102825432	3300030509	Palsa	MQRPPDPQLLGFLEAYERPIADLALALREIVLEEVPDASESIYQVYTVAIWFGFSGKMKDMFCYIATNAR
Ga0302275_102955022	3300030518	Bog	MTRPPLPQLLSFLDAYDPHVADLALALREIILEEVPDASESIYQVYTVAIWFGL
Ga0311355_106603391	3300030580	Palsa	MPRPPDPQLLGFLEAYDRHISDLALALREVILEEAPDASESIYQVYTVAIWFGFSGKMKDMFCYIATNAGH
Ga0311354_117568012	3300030618	Palsa	MERPPDPQLLGFLEAYDRHISDLALALREVILEEAPDASESIYQVYTVAIWFGFSGKM
Ga0302180_106492861	3300031028	Palsa	MRRPPDPRLLGFLEAYERNISDLALALREIVLEQAPDATESVYQVYTVAIWYGYSGK
Ga0170824_1149482423	3300031231	Forest Soil	MVGDQFTPIMPGPVQRRRPDSQLLGYLTAYDPTIADLALALREIILEERPDASESIYQVY
Ga0302307_105454732	3300031233	Palsa	MPRPPDPQLLGFLEAYDRHISDLALALREVILEEAPDASESIYQVYTVAIWFGFSGKM
Ga0302324_1001087135	3300031236	Palsa	VVYISPIMRRPPDPRLLGFLEAYERNISDLALALREIVLEQAPDATESVYQVYTVAIWYGYSGKM
Ga0302324_1009006051	3300031236	Palsa	MQRPPDPQLLAFLEAYERPIADLALALREIVLEEVPDASESIYQVYTVAIWFGFSGKM
Ga0302324_1009776793	3300031236	Palsa	MVLRPPDPQLLGFLEAYDRSISDLALALREIILEQAPDASESIYQVYTVAVWFGFSG
Ga0302324_1012210671	3300031236	Palsa	MRRPPDPLLLTFLEAYDRPIADLALALREIILEEVPDAFESIYRVYTVAIWFGYSGKMKD
Ga0302320_117625021	3300031524	Bog	VRPPDPQLLAFLEAYDRPVSDLALALREIVLEEAPHASESIYQVYTVAIWFG
Ga0302326_103342991	3300031525	Palsa	MQRPPDPQLLGFLEAYDRHISDLALALREVILEEAPDASESIYQVYTVAIWFGFSGKM
Ga0307474_114805092	3300031718	Hardwood Forest Soil	MARRPPDPQLLGFLEAYDRPISDLALALREIILEEAPNASESIYQVYTVAIWFGFSGKMKDMFCYIATNAR
Ga0307468_1016934532	3300031740	Hardwood Forest Soil	MRRPPPPQLLGFLTAYDPTIADMALALREIILDEVPDASESIYQVYTVAIWFGFSGKMKDMFCYITTNAR
Ga0302319_117609941	3300031788	Bog	MQRPPDPQLLGFLEDYDRPIIDLALALREIILEEVPDAAESIYQVYTVAIWFGFSEKMKD
Ga0302319_118874521	3300031788	Bog	MRRPPDPQLIGFLEAYDRPIADLALALREIILEEVPDACESIYQVYTVAIWFGFSEKMKDMFCYIATNARHINL
Ga0308175_1021741651	3300031938	Soil	MICPSMERPPHPQLLGFLEPYGPHVTELALALREIVLEEAPDASESIYQVYTVAIWFGFSGKMKDMFCYIA
Ga0315741_104890641	3300032739	Forest Soil	MQRPPDPRLLGFLEAYDRHISDLALALREVILEEAPDASGSIYQVYTVAIWFG
Ga0335077_110975561	3300033158	Soil	MRRPPDPQLLGFLEAYDPHIADLALALREIILEEVPDASETIYQVYTVAIWFGFSGKTKDMFCYITTSA
Ga0310811_104306231	3300033475	Soil	MKRRPPDPRLLDFLTAYDRTIADLALALREIILEEQPDASESVYQVYTVAIWFG

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F078946

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences