Metagenome / Metatranscriptome Family F078932

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F078932
Family Type	Metagenome / Metatranscriptome
Number of Sequences	116
Average Sequence Length	80 residues
Representative Sequence	VSIANARLEGLPGAAAAGRFAALVNLPNVLLVGCVVIAVWFVFVPLSALIYNAFTEDTGFGPGAFSLDNFVEAYSSWHILR
Number of Associated Samples	104
Number of Associated Scaffolds	116

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	93.91 %
% of genes near scaffold ends (potentially truncated)	97.41 %
% of genes from short scaffolds (< 2000 bps)	87.93 %
Associated GOLD sequencing projects	102
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.40

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (99.138 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (13.793 % of family members)
Environment Ontology (ENVO)	Unclassified (20.690 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (50.862 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 54.13% β-sheet: 0.00% Coil/Unstructured: 45.87%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.40
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.40
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 116 Family Scaffolds
PF13343	SBP_bac_6	49.14
PF00970	FAD_binding_6	4.31
PF02775	TPP_enzyme_C	1.72
PF03401	TctC	0.86
PF05199	GMC_oxred_C	0.86
PF00528	BPD_transp_1	0.86

COG ID	Name	Functional Category	% Frequency in 116 Family Scaffolds
COG2303	Choline dehydrogenase or related flavoprotein	Lipid transport and metabolism [I]	0.86
COG3181	Tripartite-type tricarboxylate transporter, extracytoplasmic receptor component TctC	Energy production and conversion [C]	0.86

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	99.14 %
Unclassified	root	N/A	0.86 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	99.14 %
Unclassified	root	N/A	0.86 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	99.14 %
Unclassified	root	N/A	0.86 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	81.90 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.86 %
Unclassified	root	N/A	0.86 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	78.45 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.86 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.86 %
Unclassified	root	N/A	0.86 %

Name	Rank	Taxonomy	Distribution
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	29.31 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2.59 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.86 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.86 %
Unclassified	root	N/A	0.86 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	29.31 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2.59 %
Burkholderiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	0.86 %
Pseudonocardiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales	0.86 %
Unclassified	root	N/A	0.86 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	29.31 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2.59 %
Pseudonocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	0.86 %
Burkholderiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	0.86 %
Unclassified	root	N/A	0.86 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	29.31 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2.59 %
Amycolatopsis	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Amycolatopsis	0.86 %
Burkholderiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	0.86 %
Unclassified	root	N/A	0.86 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	29.31 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2.59 %
Amycolatopsis japonica group	species group	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Amycolatopsis → Amycolatopsis japonica group	0.86 %
Burkholderiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	0.86 %
Unclassified	root	N/A	0.86 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	29.31 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2.59 %
Amycolatopsis keratiniphila	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Amycolatopsis → Amycolatopsis japonica group → Amycolatopsis keratiniphila	0.86 %
Burkholderiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	0.86 %
Unclassified	root	N/A	0.86 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000597\|AF_2010_repII_A1DRAFT_10070819	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	883	Open in IMG/M
3300000793\|AF_2010_repII_A001DRAFT_10108358	All Organisms → cellular organisms → Bacteria	584	Open in IMG/M
3300000837\|AP72_2010_repI_A100DRAFT_1007230	All Organisms → cellular organisms → Bacteria	1572	Open in IMG/M
3300001867\|JGI12627J18819_10253415	All Organisms → cellular organisms → Bacteria	708	Open in IMG/M
3300004157\|Ga0062590_100371718	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1156	Open in IMG/M
3300004157\|Ga0062590_102631335	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	535	Open in IMG/M
3300004479\|Ga0062595_102580106	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Amycolatopsis → Amycolatopsis japonica group → Amycolatopsis keratiniphila	509	Open in IMG/M
3300004633\|Ga0066395_10646516	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	623	Open in IMG/M
3300005147\|Ga0066821_1027432	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	512	Open in IMG/M
3300005166\|Ga0066674_10519013	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	534	Open in IMG/M
3300005187\|Ga0066675_10734144	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	743	Open in IMG/M
3300005332\|Ga0066388_101942348	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1052	Open in IMG/M
3300005332\|Ga0066388_105170377	All Organisms → cellular organisms → Bacteria	662	Open in IMG/M
3300005332\|Ga0066388_106539728	All Organisms → cellular organisms → Bacteria	587	Open in IMG/M
3300005341\|Ga0070691_10054592	All Organisms → cellular organisms → Bacteria	1912	Open in IMG/M
3300005536\|Ga0070697_100728724	All Organisms → cellular organisms → Bacteria	875	Open in IMG/M
3300005543\|Ga0070672_101979906	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	525	Open in IMG/M
3300005554\|Ga0066661_10006686	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	5498	Open in IMG/M
3300005576\|Ga0066708_10991327	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	522	Open in IMG/M
3300005578\|Ga0068854_100065582	All Organisms → cellular organisms → Bacteria	2640	Open in IMG/M
3300005713\|Ga0066905_101268629	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	661	Open in IMG/M
3300005764\|Ga0066903_105302590	All Organisms → cellular organisms → Bacteria	681	Open in IMG/M
3300006028\|Ga0070717_10540884	All Organisms → cellular organisms → Bacteria	1054	Open in IMG/M
3300006038\|Ga0075365_10261710	All Organisms → cellular organisms → Bacteria	1216	Open in IMG/M
3300006038\|Ga0075365_10301149	All Organisms → cellular organisms → Bacteria	1128	Open in IMG/M
3300006178\|Ga0075367_10052253	All Organisms → cellular organisms → Bacteria	2418	Open in IMG/M
3300006581\|Ga0074048_13390425	All Organisms → cellular organisms → Bacteria	1444	Open in IMG/M
3300006791\|Ga0066653_10253002	All Organisms → cellular organisms → Bacteria → Proteobacteria	897	Open in IMG/M
3300006797\|Ga0066659_10446797	All Organisms → cellular organisms → Bacteria	1026	Open in IMG/M
3300006845\|Ga0075421_101715033	All Organisms → cellular organisms → Bacteria	679	Open in IMG/M
3300006847\|Ga0075431_100880840	All Organisms → cellular organisms → Bacteria	865	Open in IMG/M
3300006904\|Ga0075424_101084172	All Organisms → cellular organisms → Bacteria	854	Open in IMG/M
3300007265\|Ga0099794_10745941	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	523	Open in IMG/M
3300009090\|Ga0099827_10000366	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	19747	Open in IMG/M
3300009177\|Ga0105248_11515082	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	759	Open in IMG/M
3300010043\|Ga0126380_11453370	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	605	Open in IMG/M
3300010046\|Ga0126384_11931760	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	563	Open in IMG/M
3300010047\|Ga0126382_10898128	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	766	Open in IMG/M
3300010301\|Ga0134070_10031384	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1758	Open in IMG/M
3300010359\|Ga0126376_13196678	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	507	Open in IMG/M
3300010360\|Ga0126372_13212540	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	508	Open in IMG/M
3300010361\|Ga0126378_12564226	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	582	Open in IMG/M
3300010366\|Ga0126379_12886896	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	575	Open in IMG/M
3300010376\|Ga0126381_102689204	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	711	Open in IMG/M
3300010376\|Ga0126381_104754529	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	522	Open in IMG/M
3300010397\|Ga0134124_11692039	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	665	Open in IMG/M
3300010398\|Ga0126383_13098927	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	543	Open in IMG/M
3300011269\|Ga0137392_10744862	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	810	Open in IMG/M
3300012212\|Ga0150985_111792431	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	654	Open in IMG/M
3300012897\|Ga0157285_10192876	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	635	Open in IMG/M
3300012917\|Ga0137395_10043090	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2799	Open in IMG/M
3300012927\|Ga0137416_10637487	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	931	Open in IMG/M
3300012948\|Ga0126375_10346470	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1052	Open in IMG/M
3300012957\|Ga0164303_10563647	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	742	Open in IMG/M
3300012971\|Ga0126369_10023316	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	4995	Open in IMG/M
3300012971\|Ga0126369_10965707	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	939	Open in IMG/M
3300012985\|Ga0164308_11124084	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	705	Open in IMG/M
3300012988\|Ga0164306_10466799	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	964	Open in IMG/M
3300015201\|Ga0173478_10279292	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	746	Open in IMG/M
3300015371\|Ga0132258_10891501	All Organisms → cellular organisms → Bacteria → Proteobacteria	2245	Open in IMG/M
3300015372\|Ga0132256_103899812	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	502	Open in IMG/M
3300016357\|Ga0182032_10115364	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1927	Open in IMG/M
3300016371\|Ga0182034_10070083	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2401	Open in IMG/M
3300016387\|Ga0182040_11312834	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	611	Open in IMG/M
3300016387\|Ga0182040_11510332	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	571	Open in IMG/M
3300016387\|Ga0182040_11912152	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	509	Open in IMG/M
3300016422\|Ga0182039_10099982	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2138	Open in IMG/M
3300016445\|Ga0182038_12156774	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	505	Open in IMG/M
3300017997\|Ga0184610_1139452	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	791	Open in IMG/M
3300018469\|Ga0190270_11289802	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	772	Open in IMG/M
3300019876\|Ga0193703_1002378	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2709	Open in IMG/M
3300019886\|Ga0193727_1138620	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	676	Open in IMG/M
3300020000\|Ga0193692_1111400	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	566	Open in IMG/M
3300020005\|Ga0193697_1036655	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1226	Open in IMG/M
3300020199\|Ga0179592_10397245	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	602	Open in IMG/M
3300025936\|Ga0207670_11232663	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	634	Open in IMG/M
3300025939\|Ga0207665_10531949	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	911	Open in IMG/M
3300025941\|Ga0207711_11052378	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	754	Open in IMG/M
3300025960\|Ga0207651_10028593	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3519	Open in IMG/M
3300026295\|Ga0209234_1043505	All Organisms → cellular organisms → Bacteria	1707	Open in IMG/M
3300026332\|Ga0209803_1123751	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1031	Open in IMG/M
3300026497\|Ga0257164_1089618	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	526	Open in IMG/M
3300027875\|Ga0209283_10095481	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1940	Open in IMG/M
3300027909\|Ga0209382_10330691	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1712	Open in IMG/M
3300027909\|Ga0209382_11852411	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	585	Open in IMG/M
3300028589\|Ga0247818_11363209	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	511	Open in IMG/M
3300028768\|Ga0307280_10020722	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1889	Open in IMG/M
3300028791\|Ga0307290_10051147	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1489	Open in IMG/M
3300028802\|Ga0307503_10046086	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1635	Open in IMG/M
3300028802\|Ga0307503_10332949	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	772	Open in IMG/M
3300031170\|Ga0307498_10105540	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	874	Open in IMG/M
3300031680\|Ga0318574_10408506	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	793	Open in IMG/M
3300031716\|Ga0310813_10071380	All Organisms → cellular organisms → Bacteria → Proteobacteria	2623	Open in IMG/M
3300031740\|Ga0307468_101016244	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	731	Open in IMG/M
3300031764\|Ga0318535_10109726	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1213	Open in IMG/M
3300031778\|Ga0318498_10189621	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	933	Open in IMG/M
3300031778\|Ga0318498_10220397	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	858	Open in IMG/M
3300031780\|Ga0318508_1253008	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	506	Open in IMG/M
3300031781\|Ga0318547_10936076	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	541	Open in IMG/M
3300031793\|Ga0318548_10132271	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1210	Open in IMG/M
3300031797\|Ga0318550_10191204	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	989	Open in IMG/M
3300031832\|Ga0318499_10374329	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	546	Open in IMG/M
3300031847\|Ga0310907_10127536	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1139	Open in IMG/M
3300031912\|Ga0306921_12056838	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	606	Open in IMG/M
3300031954\|Ga0306926_10731697	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1197	Open in IMG/M
3300031981\|Ga0318531_10151413	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1039	Open in IMG/M
3300032055\|Ga0318575_10037188	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2170	Open in IMG/M
3300032067\|Ga0318524_10113242	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1352	Open in IMG/M
3300032068\|Ga0318553_10240963	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	944	Open in IMG/M
3300032075\|Ga0310890_11002450	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	672	Open in IMG/M
3300032090\|Ga0318518_10560202	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	584	Open in IMG/M
3300032122\|Ga0310895_10283540	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	777	Open in IMG/M
3300032261\|Ga0306920_104465615	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	500	Open in IMG/M
3300034151\|Ga0364935_0015511	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1999	Open in IMG/M
3300034817\|Ga0373948_0087531	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	719	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	84.48%
Host-Associated	Host-Associated	15.52%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	83.62%
Plants	Host-Associated → Plants	15.52%
Aquatic	Environmental → Aquatic	0.86%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	82.76%
Rhizosphere	Host-Associated → Plants → Rhizosphere	9.48%
Rhizoplane	Host-Associated → Plants → Rhizoplane	3.45%
Roots	Host-Associated → Plants → Roots	2.59%
Sediment	Environmental → Aquatic → Sediment	0.86%
Floodplain	Environmental → Terrestrial → Floodplain	0.86%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	72.41%
Loam	Environmental → Terrestrial → Soil → Loam	10.34%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	6.03%
Soil	Host-Associated → Plants → Rhizosphere → Soil	3.45%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	2.59%
Bulk Soil	Host-Associated → Plants → Roots → Bulk Soil	2.59%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.86%
Sediment	Environmental → Terrestrial → Floodplain → Sediment	0.86%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	0.86%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	34.48%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	25.00%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	6.90%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	6.03%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	6.03%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	4.31%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	3.45%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	3.45%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	2.59%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	2.59%
Unclassified	Host-Associated → Plants → Roots → Bulk Soil → Unclassified	2.59%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.86%
Unclassified	Environmental → Terrestrial → Floodplain → Sediment → Unclassified	0.86%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	0.86%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	13.79%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	12.93%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	11.21%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	8.62%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	6.03%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	6.03%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	5.17%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	4.31%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	3.45%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	3.45%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	2.59%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	2.59%
Populus Endosphere	Host-Associated → Plants → Roots → Bulk Soil → Unclassified → Populus Endosphere	2.59%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.72%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	1.72%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	1.72%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.86%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.86%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	0.86%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.86%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.86%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	0.86%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.86%
Sediment	Environmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment	0.86%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	0.86%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.86%
Rhizosphere Soil	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere Soil	0.86%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.86%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	0.86%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.86%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000597	Forest soil microbial communities from Amazon forest - 2010 replicate II A1	Environmental	Open in IMG/M
3300000793	Forest soil microbial communities from Amazon forest - 2010 replicate II A001	Environmental	Open in IMG/M
3300000837	Forest soil microbial communities from Amazon forest - Pasture72 2010 replicate I A100	Environmental	Open in IMG/M
3300001867	Texas A ecozone_OM1H0_M2 (Combined assembly for Texas A ecozone Site metagenome samples, ASSEMBLY_DATE=20130705)	Environmental	Open in IMG/M
3300004157	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2	Environmental	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300005147	Soil and rhizosphere microbial communities from Laval, Canada - mgLMC	Environmental	Open in IMG/M
3300005166	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_123	Environmental	Open in IMG/M
3300005187	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005341	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005543	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG	Host-Associated	Open in IMG/M
3300005554	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110	Environmental	Open in IMG/M
3300005576	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157	Environmental	Open in IMG/M
3300005578	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2	Host-Associated	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006038	Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5	Host-Associated	Open in IMG/M
3300006178	Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2	Host-Associated	Open in IMG/M
3300006581	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLPB (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006791	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_102	Environmental	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300006845	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5	Host-Associated	Open in IMG/M
3300006847	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5	Host-Associated	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300007265	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009177	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG	Host-Associated	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010301	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09082015	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010397	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012897	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S074-202C-1	Environmental	Open in IMG/M
3300012917	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaG	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012957	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MG	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300012985	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_246_MG	Environmental	Open in IMG/M
3300012988	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_242_MG	Environmental	Open in IMG/M
3300015201	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S014-104B-1 (version 2)	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300017997	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_100_coex	Environmental	Open in IMG/M
3300018469	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 T	Environmental	Open in IMG/M
3300019876	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U3a2	Environmental	Open in IMG/M
3300019886	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2c2	Environmental	Open in IMG/M
3300020000	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L3a1	Environmental	Open in IMG/M
3300020005	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L3m2	Environmental	Open in IMG/M
3300020199	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300025936	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes)	Environmental	Open in IMG/M
3300025939	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025941	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025960	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026295	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_20cm (SPAdes)	Environmental	Open in IMG/M
3300026332	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138 (SPAdes)	Environmental	Open in IMG/M
3300026497	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - CO-08-B	Environmental	Open in IMG/M
3300027875	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027909	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)	Host-Associated	Open in IMG/M
3300028589	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Glucose_Day1	Environmental	Open in IMG/M
3300028768	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_119	Environmental	Open in IMG/M
3300028791	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_144	Environmental	Open in IMG/M
3300028802	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 17_S	Environmental	Open in IMG/M
3300031170	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 12_S	Environmental	Open in IMG/M
3300031680	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f22	Environmental	Open in IMG/M
3300031716	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YN3	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300031764	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f27	Environmental	Open in IMG/M
3300031778	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f24	Environmental	Open in IMG/M
3300031780	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f21	Environmental	Open in IMG/M
3300031781	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f20	Environmental	Open in IMG/M
3300031793	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f21	Environmental	Open in IMG/M
3300031797	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f23	Environmental	Open in IMG/M
3300031832	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f25	Environmental	Open in IMG/M
3300031847	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D4	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300031981	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f25	Environmental	Open in IMG/M
3300032055	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f23	Environmental	Open in IMG/M
3300032067	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f22	Environmental	Open in IMG/M
3300032068	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f21	Environmental	Open in IMG/M
3300032075	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D3	Environmental	Open in IMG/M
3300032090	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f22	Environmental	Open in IMG/M
3300032122	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D4	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300034151	Sediment microbial communities from East River floodplain, Colorado, United States - 2_s17	Environmental	Open in IMG/M
3300034817	Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_1	Host-Associated	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
AF_2010_repII_A1DRAFT_100708191	3300000597	Forest Soil	VSIANARLNGLPGAAAAGRFAALVSLPNVLLAGCVVIAVWFVFVPLSALIYNAFTEDTGFGPGAFSLDNFVEAYSSWHIL
AF_2010_repII_A001DRAFT_101083582	3300000793	Forest Soil	VSIANARLDGLPGAGAAGRFAALLNLPNVLLVGCVVIAVWFVFVPLSALIYNAFTEDTGFGPGAFSFDNFVEAYSSWHILRLFWNSLVF
AP72_2010_repI_A100DRAFT_10072302	3300000837	Forest Soil	VSIANARLNGLPGAAAAGRFAALVSLPNILLAGCVVIAVWFVFVPLSALIYNAFTEDTGFGPGAFSLDNFVEAYSSWHILRLFWNSLV
JGI12627J18819_102534151	3300001867	Forest Soil	LSIANARLDGLPGAGVAGRFAALLNLPNVLLVGCVVIAVWFVFVPLSALVYNAFTEDTGFGPGAFSFDNFVEAYSSWHILRLFWNSL
Ga0062590_1003717181	3300004157	Soil	VSLANGRLDRLAGLPPAGGFGALITWPNLLLGGCVVVAVWLVFVPIWALLYNAFTEDTSFGPGAFSLDNFVEAYSSWHILRLFRN
Ga0062590_1026313352	3300004157	Soil	VSIANARLDGLPGAGAAGRFAALLSLPNVLLVGCVVVAVWFVFVPLSALVYNAFTEDTGFGPGAFSFDNFVEAYSSWH
Ga0062595_1025801061	3300004479	Soil	VTVANNGLAGQPAGAAVSRAVRLATLPNILLVACVVVAVWLVFVPLSALLYNAFTEDTGFGPGAFSLDNFIEAYSSWHILRLFWN
Ga0066395_106465161	3300004633	Tropical Forest Soil	VSIANARLNGLPGAAAAGRFAALVSLPNVLLASCVVIAVWFVFVPLSALIYNAFTEDTGFGPGAFSLDNFVEAYSSWHIL
Ga0066821_10274321	3300005147	Soil	VSIANARLDRLPGAAAAGRFAALLNLPNVLLVGCVVIAVWFVFVPLSALIYNAFTEDTGFGPGAFSFDN
Ga0066674_105190131	3300005166	Soil	VSVANSRLDGLPGVSAAVRLSALVSLPNIALAVCVAVAVWLVFVPLSALLYNTFTEDTGFGPGGFSLDNFVEAYSSW
Ga0066675_107341441	3300005187	Soil	VSIANARLDGLPGAGAAGRFAALLSLPNVLLVGCVVVAVWFVFVPLSALVYNAFTEDTGFGPGAFSFDNFVEAYSSW
Ga0066388_1019423481	3300005332	Tropical Forest Soil	VSIANARLDGLPGAGAAGRFAALLNLPNVLLVGCVVIAVWFVFVPLSALIYNAFTEDTGFGPGAFSFDNFV
Ga0066388_1051703771	3300005332	Tropical Forest Soil	VSVANNRLYDLPRVAILGRLAALASPSNLMLVGCVVVAVWLVFVPLSALVYNAFTEDTGFGPGGFSLDNFVEAYSSWHIPGLLWNSV
Ga0066388_1065397281	3300005332	Tropical Forest Soil	LSIANGRVDQLPALTAVGRIARLVTVPNVALVACVLAAVWFVFVPLSALVYNAFTEDTGFGPGAFSLDNFVEAYSSWHILRLFRN
Ga0070691_100545921	3300005341	Corn, Switchgrass And Miscanthus Rhizosphere	VTVANNGLAGQPAGAAVSRAVRLATLPNILLVACVVVAVWLVFVPLSALLYNAFTEDTGFGPGAFSLDNFIEAYSSWHIL
Ga0070697_1007287242	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	VSTANARLDGLPGAGAAGRFAALLNLPNVLLVGCVVIAVWFVFVPLSALIYNAFTEDTGFGPGAFSFDNFVEAYSSWHILRLFWNSLV
Ga0070672_1019799061	3300005543	Miscanthus Rhizosphere	VTVANNRLAGRPAGAAVSRAVRLATLPNILLVACVVVAVWLVFVPLSALLYNAFTEDTGFGPGAFSLDNFIEAYSSWHILRLF
Ga0066661_100066861	3300005554	Soil	VSIANARLDGLPGAAAAGRFAALLNLPNVLLVGCVVIAVWFVFVPLSALIYNAFTEDTGFGPGAFSFDNF
Ga0066708_109913271	3300005576	Soil	VSLANGRLDRLVGQPPAGRFGALITWPNLLLGACVVIAVWLVLVPIWALLYNAFTEDTSFGPGAFSLDNFVEAYSSWHILRLF
Ga0068854_1000655821	3300005578	Corn Rhizosphere	VTVANNGLAGQPAGAAVSRAVRLATLPNILLVACVVVAVWLVFVPLSALLYNAFTEDTGFGPGAFSLDNFIEAYSSWHILRLFWNSL
Ga0066905_1012686292	3300005713	Tropical Forest Soil	VSIANARLNGAPGAAAAGRFAALVSLPNILLAGCVVVAAWFVFVPLSALIYNAFTEDTGFGPGAFSLDNFVEAYSSWHILRLFW
Ga0066903_1053025902	3300005764	Tropical Forest Soil	VTIARRLDGLSPATAAGWSVRLGPSHLLLVACAAVALWLVLVPLCALVYNAFTEDTSFGPGAFSLDNFV
Ga0070717_105408842	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	VSTANARLDGLPGAGAAGRFAALLNLPNILLVGCVVIAVWFVFVPLSALIYNAFTEDTGFGPGAFSFDNFVEAYSSWHILRLFWNSLVF
Ga0075365_102617101	3300006038	Populus Endosphere	VTVANNSLARQPAGAAVSRAVRLATLPNILLVACVVVAVWLVFVPLSALLYNAFTEDTGFGPGAFSLDNFIEAYSSWHILR
Ga0075365_103011491	3300006038	Populus Endosphere	VTVANDRLAGRRTAVAVGRAVRLATLPNILLVACVVVAVWLVFVPLSALLYNAFTEDTGFGPGAFSLDNFIEAYSSWHILRLFW
Ga0075367_100522531	3300006178	Populus Endosphere	VTVADNRLAKQPAGAAVSRAVRLVTLPNILLIACVVVAVWLVFVPLSALLYNAFTEDTGFGPGAFSLDNFIEAYSSWHILRLFW
Ga0074048_133904251	3300006581	Soil	VTVANNGLAGQPAGAAVSRAVRLATLPNILLVACVVVAVWLVFVPLSALLYNAFTEDTGFGPGAFSLDNFIE
Ga0066653_102530021	3300006791	Soil	VRTRRGLPRVATVGRLAALASLPNLMLVGCVVVVVWLVFVPLSALLYSAFTEDTGFGPGALSLDNFIEAYSSWHIPGLLWN
Ga0066659_104467971	3300006797	Soil	VSIANARLDGLPGAGAAGRFAALLSLPNVLLVGCVVVAVWFVFVPLSALVYNAFTEDTGFGPGAFSLDNFVEAYSSWHILRLFWNS
Ga0075421_1017150331	3300006845	Populus Rhizosphere	VSIANARLEGLPGAAAAGRFAALVNLPNVLLVGCVVIAVWFVFVPLSALIYNAFTEDTGFGPGAFSLDNFVEAYSSWHILR
Ga0075431_1008808401	3300006847	Populus Rhizosphere	VTIANAQLERLPGAAASRLAGLVTLPNVLLVACVAVAVWLVFVPLCALLYNAFTEDTGFGPGAFSLDNFVEAY
Ga0075424_1010841722	3300006904	Populus Rhizosphere	VSIANARLDGLPGVAAAGRFAALLNLPNVLLVGCVVIAVWFVFVPLSALIYNAFTEDTGFGPGAFSFDNFVEAYSSWHILRLFWNSLVF
Ga0099794_107459412	3300007265	Vadose Zone Soil	VSIANARLDGLPGVAAAGRFAARLNLPNVLLVGCVVIAVWFVFVPLSALIYNAFTEDTGFGPGAFSLDNFAEAYSSWHILRLFWNSL
Ga0099827_100003661	3300009090	Vadose Zone Soil	VTIANRRLHGLPAAIAAGRFARLVGPSHLLLVACAAVALWLVFVPLSALVYNAFTEDTGFGPGAFS
Ga0105248_115150821	3300009177	Switchgrass Rhizosphere	VTIANGQLERLPGAAASRLAGLVTLPNVLLVACVAVAVWLVFVPLCALLYNAFTEDTGFGPGAFSLDNFVEAYSS
Ga0126380_114533702	3300010043	Tropical Forest Soil	VSIANARLDGLPGVAAAGRFAALLNLPNVLLVGCVVIAVWFVFVPLSALIYNAFTEDTGFGPGAFSLD
Ga0126384_119317601	3300010046	Tropical Forest Soil	VSIANARLNGLPGAAAAGRFAALVSLPNILLAGCVVIAVWFVFVPLSALIYNAFTEDTGFGPGAFSLDNFVEAYSSWHILRLFWNSL
Ga0126382_108981282	3300010047	Tropical Forest Soil	LSIANGRADGLPALAAARRIARLVTVPNVALVACVLAAAWFVFVPLTALVYNAFTEDTGFGPGAFTLDNFVEAYSSWHILRLFW
Ga0134070_100313843	3300010301	Grasslands Soil	VSIANARLDGLPGAGAAGRFAALLSLPNVLLVGCVVVAVWFVFVPLSALVYNAFTEDTGFGPGAFSFDNFVEAYSSWHILRLFWN
Ga0126376_131966781	3300010359	Tropical Forest Soil	VSIANARLDGLPGVAAAGRFAALLNLPNVLLVGCVVIAVWFVFVPLSALIYNAFTEDTGFGPGAFSFDNFVEAYSSWHILRLFWN
Ga0126372_132125402	3300010360	Tropical Forest Soil	VSIANARLNGLPGAAAAGRFAALVSLPNILLAGCVVIAVWFVFVPLSALIYNAFTEDTGFGPGAFSL
Ga0126378_125642261	3300010361	Tropical Forest Soil	VSIANARLNGLPGAAAAGRFAALVSLPNVLLASCVVIAVWFVFVPLSALIYNAFTEDTGFGPGAFSLDNFVEAYSS
Ga0126379_128868961	3300010366	Tropical Forest Soil	VSIANARLNGLPGAAAAGRFAALVSLPNVLLASCVVIAVWFVFVPLSALIYNAFTEDTGFGPGAFSLDNFVEAYSSWHILRL
Ga0126381_1026892041	3300010376	Tropical Forest Soil	VSIANARLNGLPGAAAAGRFAALVSLPNILLAGCVVIAVWFVFVPLSALIYNAFTEDTGFGPGAFSLDNFVEAYSSWHILRL
Ga0126381_1047545291	3300010376	Tropical Forest Soil	VSIANARLDGRLGAGAAGRFAALLNVPNVLLVGCVVIAVWFVFVPLSALVYNAFTEDTGFGPGAFSFDNFVEAY
Ga0134124_116920391	3300010397	Terrestrial Soil	VTIANGQLERLPGAAASRLAGLVTLPNVLLVACVAVAVWLVFVPLCALLYNAFTEDTGFGPGAFSLDNFVEAYSSWHILR
Ga0126383_130989272	3300010398	Tropical Forest Soil	MPGNDGRGRGVTVANRLDRVLELPAAERLAALVSVPRLLLVLCVALAVWFVFVPLSALLYNAFTEDTGFGP
Ga0137392_107448622	3300011269	Vadose Zone Soil	VTIANRRLHGLPAAIAAGRFARRVGPSHLLLVGCAAVALWLVLVPLSALLYNAFTEDTGFGPGAFSLENFVEAYSSWHIL
Ga0150985_1117924312	3300012212	Avena Fatua Rhizosphere	VTVANNRLAGQPAGAAVSRAVRLATLPNILLVACVVVAVWLVFVPLSALLYNAFTEDTGFGPGAFSLDNFIEA
Ga0157285_101928761	3300012897	Soil	VTIANGQLERLPGAAASRLAGLVTLPNVLLVACVAVAVWLVFVPLCALLYNAFTEDTGFGPGAFSLDNFVEAYSSWHILRLFWNS
Ga0137395_100430904	3300012917	Vadose Zone Soil	VSIANARLDGLPGVAAAGRFAARLNLPNVLLVGCVVIAVWFVFVPLSALIYNAFTEDTGFGPGAFSFDNFVEAYSSWHILRLFWNSL
Ga0137416_106374872	3300012927	Vadose Zone Soil	VSIANARLDGLPGVAAAGRFAARLNLPNVLLVGCVVIAVWFVFVPLSALIYNAFTEDTGFGPGAFSLDNFAEASSSWHILRLFWNSLVF
Ga0126375_103464702	3300012948	Tropical Forest Soil	VSIANARLNGLPGAAAAGRFAALVSLPNILLAGCVVIAVWFVFVPLSALIYNAFTEDTGFGPGAFSLDNFVEAYSSWHILRLFW
Ga0164303_105636471	3300012957	Soil	VSIANARLDGLPGAGAAGRFAALLNLPNVLLVGCVVIAVWLVFVPLSALIYNAFTEDTGFGPGAFSLDNFVEAYSSWHILRLFWNSLVF
Ga0126369_100233161	3300012971	Tropical Forest Soil	LTIADRRTDKLVGADAAGRLFARVSAPALMLVACVALAVWFVFVPLSALIYNAFTEDTGFGPGAFSLDNFVEAYSGWHI
Ga0126369_109657071	3300012971	Tropical Forest Soil	VSIANARLNGLPGAAAAGRFAALVSLPNVLLASCVVIAVWFVFVPLSALIYNAFTEDTGFGPGAFSLDNFVEAYSSWHILRLFWNSL
Ga0164308_111240842	3300012985	Soil	VTIANGQLERLPASAAASRLARLVTLPNVLLVASVAVAVWLVFVPLCALLYNAFTEDTGFGPGAFSLDNFVEAYSSWHILRLFW
Ga0164306_104667991	3300012988	Soil	VTIANGQLERLPASAAASRLARLVTLPNVLLVASVAVAVWLVFVPLCALLYNAFTEDTGFGPGAFSLDNFVEAYSSWHILR
Ga0173478_102792922	3300015201	Soil	VTVANNGLAGQPAGAAVSRAVRLATLPNILLVACVVVAVWLVFVPLSALLYNAFTEDTGFGPGAFSLDNFIEAYSSWHI
Ga0132258_108915013	3300015371	Arabidopsis Rhizosphere	LSIANGRVDQLPALTAVGRIARLVTVPNVALVACVLAAVWFVFVPLSALVYNAFTEDTGFGPGAFSLDNFVEAYSSW
Ga0132258_127617972	3300015371	Arabidopsis Rhizosphere	MAAPVRPTVQGALIEAPAAGRLLAFASPPRLLLIACAGIALWLVLVPLSALLYNAFTEDTGFGPGAFSLDNFVEAYSSWHI
Ga0132256_1038998121	3300015372	Arabidopsis Rhizosphere	LSIANGRVDRLPALAAVGRIAGLVTLPNIALVACVLVAVWFVFVPLTALVYNAFTEDTGFGPGAFSLDNFVEAYSSWHIL
Ga0182032_101153643	3300016357	Soil	VSIANARLNGLTGAAAAGRFAALVSLPNILLAGCVVIAVWFVFVPLSALIYNAFTEDTGFGPGAFSLD
Ga0182034_100700831	3300016371	Soil	VSIANARLNGLTGAAAAGRFAALVSLPNILLAGCVVIAVWFVFVPLSALIYNAFTEDTGFGPGAFSLDNFVEAYSSWHILRLFWN
Ga0182040_113128341	3300016387	Soil	VSIANARLNGLLGAAAAGRFAALVSLPNILLAGCVVVAAWFVFVPLSALIYNAFTEDTGFGPGAFSLDNFVEAYSSWHILRL
Ga0182040_115103321	3300016387	Soil	VSIANARLNGLPGAAAAGRFAALVSLPSVLLASCVVIAVWFVFVPLSALIYNAFTEDTGFGPGAFSLDNFVEAY
Ga0182040_119121522	3300016387	Soil	VSIANARLNGLPGAAAADRFAALVSLPNILLAGCVVIAVWFVFVPLSALIYNAFTEDTGFGPGAFSLDNFVEAYSSWHILRLF
Ga0182039_100999821	3300016422	Soil	VSIANARLNGLPGAAAADRFAALVSLPNILLAGCVVIAVWFVFVPLSALIYNAFTEDTGFGPGAFSLDNFVEAYSSWHILRLFWN
Ga0182038_121567741	3300016445	Soil	VSIANARLDGLPGAGAAGRFAALLSLPNVLLVGCVVIAVWFVFVPLSALIYNAFTEDTGFGPGAFSFDNFVEAYSSWHILRLFWNSL
Ga0184610_11394521	3300017997	Groundwater Sediment	VKREPGNDDRGFGVSVANGRLDELPAMAAVSRAVRLVTLPNVLLVACVVVAVWLVFVPLSALLYNAFTEDTGFGPGAFSLDNFVEAYSSW
Ga0190270_112898021	3300018469	Soil	VTVANNRLAGQPAGAVVSRAVRLATLPNILLVACVVVAVWLVFVPLSALLYNAFTEDTGFGPGAFSLDNFIEAYSSWHILRL
Ga0193703_10023781	3300019876	Soil	VKREPGNDDRGFGVSVANGRLDELPAMAAVSRAVRLVTLPNVLLVACVVVAVWLVFVPLSALLYNAFTEDTGFGPGAFSLDNFV
Ga0193727_11386201	3300019886	Soil	VKREPGNDDRGFGVSVANGRLDELPAMAAVSRAVRLVTLPNVLLVACVVVAVWLVFVPLSALLYNAFTEDTGFGPGAFSLDNFVEAYSSWHILR
Ga0193692_11114002	3300020000	Soil	VKREPGNDDRGFGVSVANGRLDELPAMAAVSRAVRLVTPPNVLLVACVVVAVWLVFVPLSALLYNAFTEDTGFGPGAFSLDNFVEAYSIW
Ga0193697_10366551	3300020005	Soil	VTVANNRLAGRPAGAAVSRAVRLATLPNILLVACVVVAVWLVFVPLSALLYNAFTEDTGFGPGAFSLDNFIEAYSSWHIL
Ga0179592_103972452	3300020199	Vadose Zone Soil	LSIANGRLDDLPGVAAVGRLAAVASLPNLMLVGCVVVVVWLVFVPLSALLYNAFTEDTGFGPGGLSLDNFVEAYSSWHIPGLLW
Ga0207670_112326632	3300025936	Switchgrass Rhizosphere	VTVANNRLAGRPAGAAVSRAVRLATLPNILLVACVVVAVWLVFVPLSALLYNAFTEDTGFGPGAFSLDNFIEAYSSWHILRL
Ga0207665_105319492	3300025939	Corn, Switchgrass And Miscanthus Rhizosphere	VTVANNGLAGQPAGAAVSRAVRLATLPNILLVACVVVAVWLVFVPLSALLYNAFTEDTGFGPGAFSLDNFIEASRG
Ga0207711_110523782	3300025941	Switchgrass Rhizosphere	VTIANGQLERLPGAAASRLAGLVTLPNVLLVACVAVAVWLVFVPLCALLYNAFTEDTGFGPGAFSLDNFVEAYSSWHILRLFWN
Ga0207651_100285931	3300025960	Switchgrass Rhizosphere	VTVANNGLAGQPAGAAVSRAVRLATLPNILLVACVVVAVWLVFVPLSALLYNAFTEDTGFGPGAFSLDNFI
Ga0209234_10435052	3300026295	Grasslands Soil	VSIANARLDGLPGAGAAGRFAALLSLPNVLLVGCVVVAVWFVFVPLSALVYNAFTEDTGFGPGAFSFDNFVEAYSSWHILRLF
Ga0209803_11237512	3300026332	Soil	VSVANSRLDGLPGVSAAVRLSALVSLPNIALAVCVAVAVWLVLVPLSALLYNTFTEDTGFGPGGFSLDNFVEAYSSWHILGLLRNSVVFAVG
Ga0257164_10896182	3300026497	Soil	LSIANGRLDDLPGVAAVGRLAAVASLPNLMLVGCVVVVVWLVFVPLSALLYNAFTEDTGFGPGGLS
Ga0209283_100954813	3300027875	Vadose Zone Soil	VTIANRRLHGLPAAIAAGRFARRVGPSHLLLVGCAAVALWLVFVPLSALLYNAFTEDTGFGPGAFSLE
Ga0209382_103306911	3300027909	Populus Rhizosphere	VTIANGQLERLPGAAASRLAGLVTLPNVLLVACVAVAVWLVFVPLCALLYNAFTEDTGFGPGAFSLDNFVEAYSSWHILRL
Ga0209382_118524111	3300027909	Populus Rhizosphere	VTVANSRVEGWPGAATRLAGRVSLPSVALVACVVVAVWFVFVPLSALIYNAFTEDTGFGPGSLSLDNFVEAYS
Ga0247818_113632092	3300028589	Soil	VTVANNRLAGRPAGAAVSRAVRLATLPNILLVACVVVAVWLVFVPLSALLYNAFTEDTGFGPGAFSLD
Ga0307280_100207223	3300028768	Soil	VTVANNRLAGRPAGAAVSRAVRLATLPNILLVACVVVAVWLVFVPLSALLYNAFTEDTGFGPGAFSLDNFIEAYSSWHILRLFWN
Ga0307290_100511472	3300028791	Soil	MAAVSRAVRLVTLPNVLLVACVVVAVWLVFVPLSALLYNAFTEDTGFGPGAFSLDNFVEAYSSWHILRLF
Ga0307503_100460862	3300028802	Soil	VTVANNRLAGQPAGAVVSRAVRLATLPNILLVACVVVAVWLVFVPLSALLYNAFTEDTGFGPGAFSL
Ga0307503_103329492	3300028802	Soil	VTVANNRLAGRPAGAAVSRAVRLATLPNILLVACVVVAVWLVFVPLSALLYNAFTEDTGFGPGAFSLDNFIEAYSSWHI
Ga0307498_101055401	3300031170	Soil	VTVANNGLAGQPAGAAVSRAVRLATLPNILLVACVVVAVWLVFVPLSALLYNAFTEDTGFGPGAFSLDNFIEAYSSWHILRLFW
Ga0318574_104085062	3300031680	Soil	VSIANARLDGLPGAGAAGRFAALLNVPNVLLVGCVVIAVWFVFVPLSALVYNAFTEDTGFGPGAFSLDNFVEAYSSWHILRLFWNSVV
Ga0310813_100713801	3300031716	Soil	VTSANGQLERLPGAAASRLAGLVTLPNVLLVACVAVAVWLVFVPLCALLYNAFTEDTGFGPGAFSLDNFVE
Ga0307468_1010162441	3300031740	Hardwood Forest Soil	LSVANGRLDGLPAAAVLGRTARLVTLPNIALVACVLAAVWFVFVPLTALVYNAFTEDTGFGPGAFSLDNFVEAYSSWHILRLFWNSLVFA
Ga0318535_101097261	3300031764	Soil	VSIANARLNGLPGAAAADRFAALVSLPNILLAGCVVIAVWFVFVPLSALIYNAFTEDTGFGPGAFSLDNFVEAYSSWHILRLFW
Ga0318498_101896211	3300031778	Soil	VSIANARLDGLPGAGAAGRFAALLNVPNVLLVGCVVIAVWFVFVPLSALVYNAFTEDTGFGPGAFSLDNFVEAYSSWHILR
Ga0318498_102203971	3300031778	Soil	VSIANARLNGLTGAAAAGRFAALVSLPNILLAGCVVIAVWFVFVPLSALIYNAFTEDTGFGPGAFSLDNFVE
Ga0318508_12530081	3300031780	Soil	VSIANARLNGLTGAAAAGRFAALVSLPNILLAGCVVIAVWFVFVPLSALIYNAFTEDTGFGPGAFSLDNFVEAYSS
Ga0318547_109360761	3300031781	Soil	VSIANARLNGLPGAAAAGRVAALVSLPNILLAGCVVIAVWFVFVPLSALIYNAFTEDTGFGPGAFSLDNFVEAYSSWHILRLFWNSLV
Ga0318548_101322712	3300031793	Soil	VSIANARLDGRLGAGAAGRFAALLNVPNVLLVGCVVIAVWFVFVPLSALVYNAFTEDTGFGPGAFSFDNFVEAYSSWHILRLL
Ga0318550_101912042	3300031797	Soil	VSIANARLDGLPGAGAAGRFAALLSLPNVLLVGCVVIAVWFVFVPLSALIYNAFTEDTGFGPGAFSFDN
Ga0318499_103743292	3300031832	Soil	VSIANARLDGLPGAGAAGRFAALLNLPNVLLVGCVVIAVWFVFVPLSALVYNAFTEDTSFGPGAFSFDNFVEAYSSWHILRLLWNSSVFA
Ga0310907_101275362	3300031847	Soil	VTIANGQLERLPGSAAASRLAGLVTLPNVLLVACVAVAVWLVFVPLCALLYNAFTEDTGLGPGAFSLDNFVEAYSS
Ga0306921_120568382	3300031912	Soil	VSIANARLNGLPGAAAADRFAALVSLPNILLAGCVVIAVWFVFVPLSALIYNAFTEDTGFGPGAFSLDNFVEAYSS
Ga0306926_107316971	3300031954	Soil	VSIANARLDGLPGAGAAGRFAALLNVPNALLVGCVVIAVWFVFVPLSALVYNAFTEDTGFGPGAFSFDNF
Ga0318531_101514132	3300031981	Soil	VSIANARLDGLPGAGAAGRFAALLSLPNVLLVGCVVIAVWFVFVPLSALIYNAFTEDTGFGPGAFSFDNFVEAYSSWHILRLFWNSLV
Ga0318575_100371883	3300032055	Soil	VSIANARLNGLTGAAAAGRFAALVSLPNILLAGCVVIAVWFVFVPLSALIYNAFTEDTGFGPGAFSLDNFVEAYSSWHILRLFWNSL
Ga0318524_101132421	3300032067	Soil	VSIANARLNGLTGAAAAGRFAALVSLPNILLAGCVVIAVWFVFVPLSALIYNAFTEDTGFGPGAFSLDNFVEAYSSWHIL
Ga0318553_102409631	3300032068	Soil	VSIANARLDGLPGAGAAGRFAALLNLPNVLLVGCVVIAVWLVFVPLSALIYNAFTEDTGFGPGAFSFDNFVEAYSSW
Ga0310890_110024502	3300032075	Soil	VSLANGRLDRLAGLPPAGGFGALITWPNLLLGACVLIAVWLVFVPIWALLYNAFTEDTSFGPGAFSLDNFVEAYSSWHILRLFRN
Ga0318518_105602021	3300032090	Soil	VSIANARLNGLPGAAAAGRFAALVSLPNVLLASCVVIAVWFVFVPLSALIYNAFTEDTGFGPGAFSLDNFVEAYSSWHILRLF
Ga0310895_102835401	3300032122	Soil	VTIANGQLERLPGAAASRLAGLVTLPNVLLVACVAVAVWLVFVPLCALLYNAFTEDTGFGPGAFSLDNFVEAY
Ga0306920_1044656152	3300032261	Soil	MDCRVEPGNDAGINVSVANRLERLPHVAAASGLAALVSLPNVILVGCVVIAVWFVFVPLSALIYNAFTEDTGFGPGAFSFDNFVEAYSSWHILRLFWNSVVFA
Ga0364935_0015511_2_238	3300034151	Sediment	VTVANNRLAGQPAGAVVSRAVRLATLPNILLVACVVVAVWLVFVPLSALLYNAFTEDTGFGPGAFSLDNFIEAYSSWHI
Ga0373948_0087531_490_717	3300034817	Rhizosphere Soil	VTLANQRLERQPAGAAVSRAVRLASPANILLVACVVVAVWLVFVPLSALLYNAFTEDTGFGPGAFSLDNFIEAYSS

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F078932

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences