Metagenome / Metatranscriptome Family F078897

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F078897
Family Type	Metagenome / Metatranscriptome
Number of Sequences	116
Average Sequence Length	145 residues
Representative Sequence	MTRTSWMLTMLAATVLAAPASAQTSVDRTVPFELDKWFELNVKEGPITLHRIRLERVGGGGLKARVTGGEDEYRVAVKVELEYSNAASSDWRGVFRISWVDESGETIDGYNGSHELEEKKDFIRTGGTVTTLRYGLSRARKLRLLLNVKPD
Number of Associated Samples	101
Number of Associated Scaffolds	116

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	69.83 %
% of genes near scaffold ends (potentially truncated)	40.52 %
% of genes from short scaffolds (< 2000 bps)	83.62 %
Associated GOLD sequencing projects	91
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (100.000 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere (18.965 % of family members)
Environment Ontology (ENVO)	Unclassified (42.241 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (66.379 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 9.27% β-sheet: 45.03% Coil/Unstructured: 45.70%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 116 Family Scaffolds
PF00069	Pkinase	31.03
PF04909	Amidohydro_2	1.72
PF02954	HTH_8	0.86
PF07233	DUF1425	0.86
PF05299	Peptidase_M61	0.86
PF13722	CstA_5TM	0.86
PF01209	Ubie_methyltran	0.86

COG ID	Name	Functional Category	% Frequency in 116 Family Scaffolds
COG0515	Serine/threonine protein kinase	Signal transduction mechanisms [T]	124.14
COG0308	Aminopeptidase N, contains DUF3458 domain	Amino acid transport and metabolism [E]	0.86
COG2226	Ubiquinone/menaquinone biosynthesis C-methylase UbiE/MenG	Coenzyme transport and metabolism [H]	0.86
COG2227	2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase	Coenzyme transport and metabolism [H]	0.86
COG3975	Predicted metalloprotease, contains C-terminal PDZ domain	General function prediction only [R]	0.86
COG5633	Uncharacterized conserved protein YcfL	Function unknown [S]	0.86

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	76.72 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	6.03 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	75.00 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1.72 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	75.00 %
Xanthomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales	0.86 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	75.00 %
Xanthomonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae	0.86 %
Unclassified	root	N/A	0.00 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000364\|INPhiseqgaiiFebDRAFT_105811288	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	831	Open in IMG/M
3300000364\|INPhiseqgaiiFebDRAFT_105812058	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	949	Open in IMG/M
3300000364\|INPhiseqgaiiFebDRAFT_105812432	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	864	Open in IMG/M
3300000956\|JGI10216J12902_120333143	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	531	Open in IMG/M
3300001431\|F14TB_101008044	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	834	Open in IMG/M
3300003324\|soilH2_10333109	All Organisms → cellular organisms → Bacteria	1155	Open in IMG/M
3300004114\|Ga0062593_100310535	All Organisms → cellular organisms → Bacteria	1351	Open in IMG/M
3300004114\|Ga0062593_100718174	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	978	Open in IMG/M
3300004463\|Ga0063356_105377589	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	550	Open in IMG/M
3300004479\|Ga0062595_101324974	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	650	Open in IMG/M
3300005328\|Ga0070676_10427746	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	926	Open in IMG/M
3300005334\|Ga0068869_101462560	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	606	Open in IMG/M
3300005335\|Ga0070666_10505950	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	876	Open in IMG/M
3300005336\|Ga0070680_100397851	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1174	Open in IMG/M
3300005347\|Ga0070668_100687062	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	902	Open in IMG/M
3300005355\|Ga0070671_101124488	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	690	Open in IMG/M
3300005364\|Ga0070673_100828811	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	855	Open in IMG/M
3300005366\|Ga0070659_101402389	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	621	Open in IMG/M
3300005406\|Ga0070703_10027121	All Organisms → cellular organisms → Bacteria	1706	Open in IMG/M
3300005440\|Ga0070705_101332272	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	596	Open in IMG/M
3300005441\|Ga0070700_101842559	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	522	Open in IMG/M
3300005467\|Ga0070706_100563418	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1059	Open in IMG/M
3300005471\|Ga0070698_101654114	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	592	Open in IMG/M
3300005545\|Ga0070695_101642808	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	537	Open in IMG/M
3300005556\|Ga0066707_10941357	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	528	Open in IMG/M
3300005618\|Ga0068864_101385546	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	705	Open in IMG/M
3300005719\|Ga0068861_100095071	All Organisms → cellular organisms → Bacteria	2359	Open in IMG/M
3300006046\|Ga0066652_100885612	All Organisms → cellular organisms → Bacteria	852	Open in IMG/M
3300006196\|Ga0075422_10204957	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	812	Open in IMG/M
3300006237\|Ga0097621_100265416	All Organisms → cellular organisms → Bacteria	1507	Open in IMG/M
3300006845\|Ga0075421_100004471	All Organisms → cellular organisms → Bacteria → Proteobacteria	16880	Open in IMG/M
3300006845\|Ga0075421_100114294	All Organisms → cellular organisms → Bacteria	3392	Open in IMG/M
3300006845\|Ga0075421_100574929	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1328	Open in IMG/M
3300006845\|Ga0075421_102245130	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	575	Open in IMG/M
3300006847\|Ga0075431_101009823	All Organisms → cellular organisms → Bacteria	799	Open in IMG/M
3300006853\|Ga0075420_101588778	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	560	Open in IMG/M
3300006854\|Ga0075425_100004329	All Organisms → cellular organisms → Bacteria	14635	Open in IMG/M
3300006854\|Ga0075425_101141020	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	887	Open in IMG/M
3300006871\|Ga0075434_100288873	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1660	Open in IMG/M
3300006903\|Ga0075426_10670661	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	777	Open in IMG/M
3300006904\|Ga0075424_100362830	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1544	Open in IMG/M
3300006904\|Ga0075424_101392378	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	745	Open in IMG/M
3300006914\|Ga0075436_100730065	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	735	Open in IMG/M
3300007076\|Ga0075435_100590120	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	963	Open in IMG/M
3300009038\|Ga0099829_10113399	All Organisms → cellular organisms → Bacteria	2125	Open in IMG/M
3300009089\|Ga0099828_11235077	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	662	Open in IMG/M
3300009090\|Ga0099827_10920844	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	757	Open in IMG/M
3300009147\|Ga0114129_10079047	All Organisms → cellular organisms → Bacteria → Proteobacteria	4573	Open in IMG/M
3300009147\|Ga0114129_13433589	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	508	Open in IMG/M
3300009162\|Ga0075423_10224292	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1969	Open in IMG/M
3300009162\|Ga0075423_11290251	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	780	Open in IMG/M
3300009176\|Ga0105242_10137597	All Organisms → cellular organisms → Bacteria → Acidobacteria	2115	Open in IMG/M
3300010399\|Ga0134127_10150501	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2112	Open in IMG/M
3300010399\|Ga0134127_10541347	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae	1183	Open in IMG/M
3300010403\|Ga0134123_10935262	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	876	Open in IMG/M
3300011429\|Ga0137455_1218065	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	566	Open in IMG/M
3300011444\|Ga0137463_1064208	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1373	Open in IMG/M
3300012201\|Ga0137365_11135846	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	561	Open in IMG/M
3300012202\|Ga0137363_10470257	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1053	Open in IMG/M
3300012204\|Ga0137374_10622218	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	821	Open in IMG/M
3300012350\|Ga0137372_10250834	All Organisms → cellular organisms → Bacteria	1392	Open in IMG/M
3300012353\|Ga0137367_10260861	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1245	Open in IMG/M
3300012360\|Ga0137375_10344675	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1325	Open in IMG/M
3300012362\|Ga0137361_10141526	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2141	Open in IMG/M
3300012469\|Ga0150984_119610066	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	584	Open in IMG/M
3300012922\|Ga0137394_10029008	All Organisms → cellular organisms → Bacteria	4482	Open in IMG/M
3300012922\|Ga0137394_10620053	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	914	Open in IMG/M
3300012944\|Ga0137410_10364448	All Organisms → cellular organisms → Bacteria	1158	Open in IMG/M
3300012957\|Ga0164303_10570825	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	739	Open in IMG/M
3300014325\|Ga0163163_10860794	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	970	Open in IMG/M
3300014745\|Ga0157377_10896145	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	663	Open in IMG/M
3300014969\|Ga0157376_10300367	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1519	Open in IMG/M
3300015200\|Ga0173480_10153612	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1178	Open in IMG/M
3300015245\|Ga0137409_10676589	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	865	Open in IMG/M
3300015371\|Ga0132258_10121846	All Organisms → cellular organisms → Bacteria	6198	Open in IMG/M
3300015373\|Ga0132257_101223425	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	951	Open in IMG/M
3300018071\|Ga0184618_10287738	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	698	Open in IMG/M
3300018081\|Ga0184625_10184086	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1094	Open in IMG/M
3300018083\|Ga0184628_10086640	All Organisms → cellular organisms → Bacteria → Proteobacteria	1602	Open in IMG/M
3300018429\|Ga0190272_13081796	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	517	Open in IMG/M
3300022756\|Ga0222622_10070409	All Organisms → cellular organisms → Bacteria → Acidobacteria	2056	Open in IMG/M
3300022880\|Ga0247792_1066754	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	697	Open in IMG/M
3300025885\|Ga0207653_10023186	All Organisms → cellular organisms → Bacteria	1976	Open in IMG/M
3300025899\|Ga0207642_10234244	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1033	Open in IMG/M
3300025910\|Ga0207684_10017575	All Organisms → cellular organisms → Bacteria	6133	Open in IMG/M
3300025931\|Ga0207644_10733511	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	825	Open in IMG/M
3300025933\|Ga0207706_11524676	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	544	Open in IMG/M
3300025936\|Ga0207670_11281084	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	621	Open in IMG/M
3300025942\|Ga0207689_10911253	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	742	Open in IMG/M
3300025960\|Ga0207651_10733902	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	872	Open in IMG/M
3300025972\|Ga0207668_10607192	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	953	Open in IMG/M
3300026035\|Ga0207703_12050252	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	548	Open in IMG/M
3300026041\|Ga0207639_11999903	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	541	Open in IMG/M
3300026116\|Ga0207674_11594226	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	621	Open in IMG/M
3300026118\|Ga0207675_100092928	All Organisms → cellular organisms → Bacteria → Proteobacteria	2837	Open in IMG/M
3300026304\|Ga0209240_1005616	All Organisms → cellular organisms → Bacteria	4727	Open in IMG/M
3300026319\|Ga0209647_1044023	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2468	Open in IMG/M
3300027846\|Ga0209180_10195559	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1166	Open in IMG/M
3300027866\|Ga0209813_10010621	All Organisms → cellular organisms → Bacteria	2386	Open in IMG/M
3300027909\|Ga0209382_10001104	All Organisms → cellular organisms → Bacteria	43223	Open in IMG/M
3300027909\|Ga0209382_10048082	All Organisms → cellular organisms → Bacteria	5091	Open in IMG/M
3300027909\|Ga0209382_11089814	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	825	Open in IMG/M
3300028784\|Ga0307282_10559177	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	555	Open in IMG/M
3300028802\|Ga0307503_10652747	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	586	Open in IMG/M
3300028803\|Ga0307281_10037351	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1482	Open in IMG/M
3300028828\|Ga0307312_10473721	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	826	Open in IMG/M
3300028828\|Ga0307312_10720399	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	661	Open in IMG/M
3300028875\|Ga0307289_10127981	All Organisms → cellular organisms → Bacteria → Proteobacteria	1042	Open in IMG/M
3300030336\|Ga0247826_10307803	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1138	Open in IMG/M
3300031170\|Ga0307498_10119858	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	836	Open in IMG/M
3300031226\|Ga0307497_10588812	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	561	Open in IMG/M
3300031421\|Ga0308194_10208510	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	636	Open in IMG/M
3300031740\|Ga0307468_101399067	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	643	Open in IMG/M
3300031943\|Ga0310885_10108804	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1270	Open in IMG/M
3300032012\|Ga0310902_10511920	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	784	Open in IMG/M
3300032013\|Ga0310906_10064832	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1867	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	56.03%
Host-Associated	Host-Associated	43.97%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	50.86%
Plants	Host-Associated → Plants	43.97%
Aquatic	Environmental → Aquatic	5.17%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	50.86%
Rhizosphere	Host-Associated → Plants → Rhizosphere	31.03%
Rhizoplane	Host-Associated → Plants → Rhizoplane	10.34%
Sediment	Environmental → Aquatic → Sediment	5.17%
Roots	Host-Associated → Plants → Roots	2.59%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	41.38%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	21.55%
Loam	Environmental → Terrestrial → Soil → Loam	9.48%
Soil	Host-Associated → Plants → Rhizosphere → Soil	9.48%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	8.62%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	5.17%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	1.72%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	1.72%
Bulk Soil	Host-Associated → Plants → Roots → Bulk Soil	0.86%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	25.86%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	21.55%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	9.48%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	8.62%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	8.62%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	6.90%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	5.17%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	4.31%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	3.45%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	1.72%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	1.72%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	0.86%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.86%
Unclassified	Host-Associated → Plants → Roots → Bulk Soil → Unclassified	0.86%

Habitat	Taxonomy	Distribution
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	18.97%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	12.93%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	10.34%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	6.90%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	6.03%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	5.17%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	3.45%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	3.45%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	2.59%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	2.59%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	2.59%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	2.59%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	1.72%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	1.72%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	1.72%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	1.72%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.72%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	1.72%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.86%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.86%
Sugarcane Root And Bulk Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Sugarcane Root And Bulk Soil	0.86%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.86%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.86%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	0.86%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.86%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	0.86%
Populus Endosphere	Host-Associated → Plants → Roots → Bulk Soil → Unclassified → Populus Endosphere	0.86%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	0.86%
Switchgrass Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere	0.86%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.86%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	0.86%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	0.86%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300001431	Amended soil microbial communities from Kansas Great Prairies, USA - BrdU F1.4TB clc assemly	Environmental	Open in IMG/M
3300003324	Sugarcane bulk soil Sample H2	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300005328	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG	Host-Associated	Open in IMG/M
3300005334	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2	Host-Associated	Open in IMG/M
3300005335	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG	Host-Associated	Open in IMG/M
3300005336	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG	Environmental	Open in IMG/M
3300005347	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG	Host-Associated	Open in IMG/M
3300005355	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG	Host-Associated	Open in IMG/M
3300005364	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG	Host-Associated	Open in IMG/M
3300005366	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG	Host-Associated	Open in IMG/M
3300005406	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG	Environmental	Open in IMG/M
3300005440	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG	Environmental	Open in IMG/M
3300005441	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005545	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG	Environmental	Open in IMG/M
3300005556	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156	Environmental	Open in IMG/M
3300005618	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2	Host-Associated	Open in IMG/M
3300005719	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2	Host-Associated	Open in IMG/M
3300006046	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101	Environmental	Open in IMG/M
3300006196	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1	Host-Associated	Open in IMG/M
3300006237	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2)	Host-Associated	Open in IMG/M
3300006845	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5	Host-Associated	Open in IMG/M
3300006847	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5	Host-Associated	Open in IMG/M
3300006853	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD4	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300006903	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD5	Host-Associated	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300006914	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5	Host-Associated	Open in IMG/M
3300007076	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4	Host-Associated	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009176	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG	Host-Associated	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300010403	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3	Environmental	Open in IMG/M
3300011429	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT600_2	Environmental	Open in IMG/M
3300011444	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT800_2	Environmental	Open in IMG/M
3300012201	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012204	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_100_16 metaG	Environmental	Open in IMG/M
3300012350	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_60_16 metaG	Environmental	Open in IMG/M
3300012353	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_80_16 metaG	Environmental	Open in IMG/M
3300012360	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_113_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012922	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaG	Environmental	Open in IMG/M
3300012944	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012957	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MG	Environmental	Open in IMG/M
3300014325	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG	Host-Associated	Open in IMG/M
3300014745	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG	Host-Associated	Open in IMG/M
3300014969	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG	Host-Associated	Open in IMG/M
3300015200	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S209-509C-1 (version 2)	Environmental	Open in IMG/M
3300015245	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300018071	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_b1	Environmental	Open in IMG/M
3300018081	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b1	Environmental	Open in IMG/M
3300018083	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_5_b1	Environmental	Open in IMG/M
3300018429	Populus adjacent soil microbial communities from riparian zone of Shoshone River, Wyoming, USA - 504 T	Environmental	Open in IMG/M
3300022756	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1	Environmental	Open in IMG/M
3300022880	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S106-311C-6	Environmental	Open in IMG/M
3300025885	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025899	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025931	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025933	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025936	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes)	Environmental	Open in IMG/M
3300025942	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025960	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025972	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026035	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026041	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026116	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026118	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026304	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_80cm (SPAdes)	Environmental	Open in IMG/M
3300026319	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_60cm (SPAdes)	Environmental	Open in IMG/M
3300027846	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027866	Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 (SPAdes)	Host-Associated	Open in IMG/M
3300027909	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)	Host-Associated	Open in IMG/M
3300028784	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_121	Environmental	Open in IMG/M
3300028802	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 17_S	Environmental	Open in IMG/M
3300028803	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_120	Environmental	Open in IMG/M
3300028828	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_202	Environmental	Open in IMG/M
3300028875	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_143	Environmental	Open in IMG/M
3300030336	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day1	Environmental	Open in IMG/M
3300031170	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 12_S	Environmental	Open in IMG/M
3300031226	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 10_S	Environmental	Open in IMG/M
3300031421	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_195 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300031943	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D2	Environmental	Open in IMG/M
3300032012	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D3	Environmental	Open in IMG/M
3300032013	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D3	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
INPhiseqgaiiFebDRAFT_1058112882	3300000364	Soil	MTRTSWILSMLAATVLAVPASAQTSVDRTVPFELDKWFELNVKEGPVTLHRIHLERVGGGLKAHVTGGETEYRVPVKVEIEYSNAASSDWRGVFRISWVDESGETIDGYNGSHELEEKKDFIRTGGTVTTLRYGLARARKLRLLLNVKPD*
INPhiseqgaiiFebDRAFT_1058120582	3300000364	Soil	MARTPWMLTLLAATVLAAPASAQTLVDKTVPFELDKWYELDVKEGPITLHRLRLERAPGGGLKARVTGGEDEYRVPVKAELEYSNAASSDWRVVFRISWVDESGEAIDGYNGSHQLSEKKDFXRTGGTVTTLXYGLARARKLRXLLNVKPD*
INPhiseqgaiiFebDRAFT_1058124321	3300000364	Soil	MTRTSWILSMLAATVLAVPASAQTSVDRTVPFELDXWFELNVKEGPVTLHRIHLERVGGGLKAHVTGGETEYRVPVKVEIEYSNAASSDWRVVFRISWVDESGEAIDGYNGSHQLSEKKDFERTGG
JGI10216J12902_1203331431	3300000956	Soil	MTRTTWMLTLLAATVLAAPASAQTSVDKTLPFELDKWYELNVKEGPITLHRIRLERAAGGGLKSRVTGGEDEYRAPLKVELEYTNAASSDWRVVFHISWLDESGEAIDGYNGSHQLSEKKDFERTGGSVMTLRYGLARARKLRLQLNV
F14TB_1010080441	3300001431	Soil	RTVPFELDKWFELNVKEGPVTLHRIHLERVGGGLKAHVTGGETEYRVPVKVXXXXXXXXXXDWRGVFRISWVDESGETIDGYNGSHELEEKKDFSRAGGTVTTLRYGLARARKLRILLNVKPD*
soilH2_103331092	3300003324	Sugarcane Root And Bulk Soil	MARIAWSTLVAASLLAVPASAQTSVDKTVPFELDRWYELNVKEGPITLHRIRLERQGGGGLKARVTGADDEFRTPVKVELEYTNVASSDWRAVFRVTWTDEAGETIDGYNGSHQLSEKKDFERTGGTVSTLRYGIAKAKKLRLLINVKPD*
Ga0062593_1003105352	3300004114	Soil	MTRTSWMLTMLAATVLAAPASAQTSVDRTVPFELDKWFELNVKEGPITLHRIRLERVGGGGLKARVTGGEDEYRVAVKVELEYSNAASSDWRGVFRISWVDEAGETIDGYNGSHELEEKKDFIRTGGTVTTLRYGLAHARRLRLLLNVKPD*
Ga0062593_1007181741	3300004114	Soil	MTRTAWMVTLLAATVLARPASAQTSVDKTVPFELEKWYELNVKEGPITLHRIRLERGAGGGLKSRVTGGEDEYRVPVKVELEYTNAASSDWRAVFRVSWVDDGGETIDGYNGSHQLSEKKDFERTGGTVTTLRYGLARAKKLRLLLNVKPD*
Ga0063356_1053775891	3300004463	Arabidopsis Thaliana Rhizosphere	MTRTSWMLSVLAATVLAVPASAQTSVDRTVPFELDKWFELNVKEGPVTLHRIHLERVGGGLKAHVTGGETEYRVPVKVEIEYSNAASSDWRGVFRISWVDESGETIDGYNGSHELEEKKDFSRAGGTVTTLRYGLA
Ga0062595_1013249741	3300004479	Soil	ATTVLSAPASAQTSVDKTLPFELDKWYELNVKEGPITLHRIRLERAGGGGLKARVTGGEDEYRVPVKAELEYSNAASSDWRVVFRISWVDESGEAIDGYNGSHQLSEKKDFERASGTVTTLRYGLTRAKKLRLLLSIKPD*
Ga0070676_104277462	3300005328	Miscanthus Rhizosphere	MTRTSWMLGVLAATVLAVPASAQTSVDRTVPFELEKWFELNVKEGPITLHRIRLERVGAGLKARVTGGEDEYRVAVKVELEYSNAASSDWRGVFRISWVDESGETIDGYNGSHELEEKKDFIRTGGTVTTLRYGLSRARKLRLLLNVKPD*
Ga0068869_1014625601	3300005334	Miscanthus Rhizosphere	MARTSWMLTLLVAAVLAAPASAQTSVDKTVPFELDKWYELNVKEGPITLHRIRFERGAGGGLKSRVTGGEDEYRVPVKAELEYSNVASSDWRVVFRISWVDDGGEAIDGYNGSHQLSEKKDFERASGTVT
Ga0070666_105059501	3300005335	Switchgrass Rhizosphere	MTRTSWMLGVLAATVLAVPASAQTSVDRTVPFELEKWFELNVKEGPITLHRIRLERVGAGLKARVTGGEDEYRVAVKVELEYSNAASSDWRGVFRISWVDESGETIDGYNGSHELEEKKDFSRAGGTVTTLRY
Ga0070680_1003978511	3300005336	Corn Rhizosphere	MTRTSWMLGVLAATVLAVPASAQTSVDRTVPFELEKWFELNVKEGPITLHRIRLERVGAGLKARVTGGEDEYRVAVKVELEYSNAASSDWRGVFRISWVDESGETIDGYNGSHELEEKKDFIRMGGTVTTLRYGLSRARKLRLLLNVKPD*
Ga0070668_1006870621	3300005347	Switchgrass Rhizosphere	MTRTSWMLSVLAATVLAVPASAQTSVDRTVPFELDKWFELNVKEGPVTLHRIHLERVGGGLKAHVTGGETEYRVPVKVEIEYSNAASSDWRGVFRISWVDESGETIDGYNGSHELEEKKDFSRAGGTVTTLRYGLARARKLRILLNVKPD*
Ga0070671_1011244881	3300005355	Switchgrass Rhizosphere	MLGVLAATVLAVPASAQTSVDRTVPFELEKWFELNVKEGPITLHRIRLERVGAGLKARVTGGEDEYRVAVKVELEYSNAASSDWRGVFRISWVDESGETIDGYNGSHELEEKKDFIRTGGTVTTLRYGLSRARKLRLLLNVKPD*
Ga0070673_1008288112	3300005364	Switchgrass Rhizosphere	RTSWMLGVLAATVLAVPASAQTSVDRTVPFELEKWFELNVKEGPITLHRIRLERVGAGLKARVTGGEDEYRVAVKVELEYSNAASSDWRGVFRISWVDESGETIDGYNGSHELEEKKDFIRTGGTVTTLRYGLSRARKLRLLLNVKPD*
Ga0070659_1014023892	3300005366	Corn Rhizosphere	GVLAATVLAVPASAQTSVDRTVPFELEKWFELNVKEGPITLHRIRLERVGAGLKARVTGGEDEYRVAVKVELEYSNAASSDWRGVFRISWVDESGETIDGYNGSHELEEKKDFIRTGGTVTTLRYGLSRARKLRLLLNVKPD*
Ga0070703_100271212	3300005406	Corn, Switchgrass And Miscanthus Rhizosphere	MRPTSWMVTLLAATVLAAPASAQTSVDKTVPFELDKWYELNVKEGPITLHRIRLERTGGGGLKARVTGGEDEYRVPVKVELEYTNVASSDWRVVFRISWVDDGGEAIDGYNGSHQLSEKKDFERTGGTVTTLRYGLARARKLRLLLNVKPD*
Ga0070705_1013322721	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	MTRTSWMFTLLAATVLAAPASAQTLVDKTVPFELDKWYELNVKEGPITLHRIRLERAGGGGLKARVIGGEDEYRVPVKVELEYSNISSTDWKAVFQVSWVDEGGEAIDGYYGSHQLDEKKDFDR
Ga0070700_1018425591	3300005441	Corn, Switchgrass And Miscanthus Rhizosphere	MTRTSWMLGVLAATVLAVPASAQTSVDRTVPFELEKWFELNVKEGPITLHRIRLERVGAGLKARVTGGEDEYRVAVKVELEYSNAASSDWRGVFRISWVDESGETIDGYNGSHELEEKKDFIRTGGTVTTLRYGLSR
Ga0070706_1005634182	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	MRPTSWMVTLLAATVLAAPASAQTSVDKTVPFELDKWYELNVKEGPITLHRIRLERTAGGGLKARVTGGEDEYRVPVKVELEYTNVASSDWRVVFRISWVDDGGEAIDGYNGSHQLSEKKDFERTGGTVTTLRYGLARARKLRLLLNVKPD*
Ga0070698_1016541141	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	MRPTSWMVTLLAATVLAAPASAQTSVDKTVPFELDKWYELNVKEGPITLHRIRLERTAGGGLKARVTGGEDEYRVPVKVELEYTNVASSDWRVVFRISWVDDGGEAIDGYNGSHQLSEKKDFERTGG
Ga0070695_1016428082	3300005545	Corn, Switchgrass And Miscanthus Rhizosphere	MTRTSWMLGVLAATVLAVPASAQTSVDRTVPFELEKWFELNVKEGPITLHRIRLERVGAGLKARVTGGEDEYRVAVKVELEYSNAASSDWRGVFRISWVDESGETIDGYNGSHELEEKKDFIRTGGTVTTLRYGL
Ga0066707_109413571	3300005556	Soil	APASAQTSVDKTVPFELDKWYELNVKEGPITLHRIRLERTGGGGLKARVTGGEDEYRVPVKVELEYSNISSTDWRAVFRVSWVDESGETIDGYNGSHQLDEKKDFDRTGGTVTTLRYGIGRARKLRLLINVKPD*
Ga0068864_1013855462	3300005618	Switchgrass Rhizosphere	MTRTSWMFTLLAATVLAAPASAQTLVDKTVPFELDKWYELNVKEGPITLHRIRLERAGGGGLKARVTGGEDEYRVPVKAELEYSNVASSDWRVVFRISWVDDGGEAIDGYNGSHQLSEKKDFERASGTVTTLRYGLARAKKLRVFLSVKPD*
Ga0068861_1000950714	3300005719	Switchgrass Rhizosphere	MTRTSWMLSVLAATVLAVPASAQTSVDRTVPFELDKWFELNVKEGPVTLHRIHLERVGGGLKAHVTGGETEYRVPVKVEIEYSNAASSDWRGVFRISWVDESGETIDGYNGSHELEEKKDFSRAGGTVTTLRYGLARARKLRILLTVKPD*
Ga0066652_1008856122	3300006046	Soil	MARTSWMLTLLASAAVLAVPASAQTSVDKTMPFELDKWYELNAKEGPITLHRIRLERGAGGGLKSRVTGGEDEYRVPVKVELEYSNAASSDWRVVFRVSWTDDGGEAIDGYNGSHQLSEKKDFERTGGTVTTLRYGLARAKKLRLLLNVKPD*
Ga0075422_102049571	3300006196	Populus Rhizosphere	WMLSVLAATVLAVPASAQTSVDRTVPFELDKWFELNVKEGPVTLHRIHLERVGGGLKAHVTGGETEYRVPVKVEIEYSNAASSDWRGVFRISWVDESGETIDGYNGSHELEEKKDFSRAGGTVTTLRYGLARARKLRILLTVKPD*
Ga0097621_1002654162	3300006237	Miscanthus Rhizosphere	ASAQTSVDRTVPFELEKWFELNVKEGPITLHRIRLERVGAGLKARVTGGEDEYRVAVKVELEYSNAASSDWRGVFRISWVDESGETIDGYNGSHELEEKKDFIRTGGTVTTLRYGLSRARKLRLLLNVKPD*
Ga0075421_10000447113	3300006845	Populus Rhizosphere	MTRTSGMVILLAATVLSAPASAQTSVDKTLPFELDKWYELNVKEGPITLHRIRLERAGGGGLKARVTGGEDEYRVPVKVELEYSNVSSTDWRAVFRVSWVDEGGEAIDGYNGSHQLDEKKDFDRTGGTVTTLRYGLARARKLRLLLSVKPD*
Ga0075421_1001142945	3300006845	Populus Rhizosphere	MTRTSWMVTLLAAVLAAPASAQTSVDKTVPFELDKWYELNVKEGPITLHRIRLERSGGGGLKARVSGGEDEYRIPVKVELEYSNVSSSDWRAVFRISWVDDGGEAIDGYNGSHELEEKKDFSRAGGTVTTLRYGLIRARKVRFLLNVKPD*
Ga0075421_1005749292	3300006845	Populus Rhizosphere	PFELDKWYELNVKEGPITLHRIRLERTGGGGLKARVTGAEDEYRVPVKVELEYSNVASSDWRVLFRVSWVDDGGEAIDGYNGSHQLSEKKDFERTGGTVTTLRYGIGRARKLRLLLSVKPD*
Ga0075421_1022451301	3300006845	Populus Rhizosphere	MTRTSWMLSMLAATVLAAPASAQTSVDRTVPFELDKWFELNVKEGPITLHRIRLERVGGGGLKARVTGSEDEYRAAVKVELEYSNAASSDWRGVFRISWVDESGETIDGYNGSHELEEKKDFSRAGGTV
Ga0075431_1010098232	3300006847	Populus Rhizosphere	MRPTSWMVTLLAATVLTAPASAQTSVDKTVPFELDKWYELNVKEGPITLHRIRLERTGGGGLKARVTGAEDEYRVPVKVELEYSNVASSDWRVLFRVSWVDDGGEAIDGYNGSHELEEKKDFSRAGGTVTTLRYGLIRARKV
Ga0075420_1015887781	3300006853	Populus Rhizosphere	MTRTSWMLSVLAATVLAVPASAQTSVDRTVPFELDKWFELNVKEGPVTLHRIHLERVGGGLKAHVTGGETEYRVPVKVEIEYSNAASSDWRGVFRISWVDESGETIDGYNGSHELEEKKDFSRAGGT
Ga0075425_10000432911	3300006854	Populus Rhizosphere	MTRTPWMLTLLAATVLSAPVSAQTSVDKTLPFELDKWYELNVKEGPITLHRIRLERGAGGGLKSRVTGGEDEYRAPLKVELEYSNAASSDWRVVFRISWTDDSGEAIDGYNGSHQLSEKKDFERTGGTVMTLRYGLARARKLRLLLNIKPD*
Ga0075425_1011410201	3300006854	Populus Rhizosphere	MTRTSWMLGVLAATVLAVPASAQTSVDRTVPFELEKWFELNVKEGPITLHRIRLERVGAGLKARVTGGEDEYRVAVKVELEYSNAASSDWRGVFRISWVDESGETIDGYNGSHELEEKKDFIRTGGTVTTLRYGVARARKLRLLLNVKPD*
Ga0075434_1002888731	3300006871	Populus Rhizosphere	SAQTSVDKTLPFELDKWYELNVKEGPITLHRIRLERGVGGGLKSRVTGGEDEYRAPLKVELEYSNAASSDWRVVFRISWTDDSGEAIDGYNGSHQLSEKKDFERTGGTVMTLRYGLARARKLRLLLNIKPD*
Ga0075426_106706612	3300006903	Populus Rhizosphere	MARTSWMLTLLASAAALAVPASAQTSVDKTVPFELDKWYELNVKEGPITLHRIRLERGAGGGLKSRVTGGEDEYRAPVKVELEYSNAASSDWRVVFRVSWTDDGGEAIDGYNGSHQLSEKKDFERTGGTVTTLRYGLARARKVRLLLNVKPD*
Ga0075424_1003628302	3300006904	Populus Rhizosphere	MTRTPWMLTLLAATVLSAPVSAQTSVDKTLPFELDKWYELNVKEGPITLHRIRLERGVGGGLKSRVTGGEDEYRAPLKVELEYSNAASSDWRVVFRISWTDDSGEAIDGYNGSHQLSEKKDFERTGGTVMTLRYGLARARKLRLLLNIKPD*
Ga0075424_1013923781	3300006904	Populus Rhizosphere	MTRRSLMLSLLAATVLAVPASAQTSVDRTVPFELDKWFELNVKEGPITLHRIRLERVNAGLKARVTGGEDEYRAAVKVELEYSNAASSDWRGVFRISWVDESGETIDGYNGSHELEEKKDFSRTGGTVTTLRYGLSRARKLRLLLNVKPD*
Ga0075436_1007300651	3300006914	Populus Rhizosphere	MRPTSWMVTLLAATVLAAPASAQTSVDKTVPFELDKWYELNVKEGPITLHRIRLERAAGGGLKARVTGGEDEYRVPIKVELEYTNVASSDWRVVFRVSWVDDGGEAIDGYNGSHQLSEKKDFERTGGTVTTLRYGLARAKKLRLLLNVKPD*
Ga0075435_1005901201	3300007076	Populus Rhizosphere	MVTLLAATVLAAPASAQTSVDKTVPFELDKWYELNVKEGPITLHRIRLERAAGGGLKARVTGGEDEYRVPIKVELEYTNVASSDWRVVFRVSWVDDGGEAIDGYNGSHQLSEKKDFERTGGTVTTLRYGLARARKVRLLLNVKPD*
Ga0099829_101133992	3300009038	Vadose Zone Soil	MRLRTSLMTLAAAAALVAPAAAQTLVDKTLPFELDKWYELKATDGPITLHRLRLERQGGGGLKARVTRGADEEYAAPVKVELEYSNAASTDWRAVFRITWVDDAGETIDGYNGSHQLDEKKDFARTGGTVTTLKYGLAKARRLRVLLSVKPD*
Ga0099828_112350771	3300009089	Vadose Zone Soil	MVPLLAATVLAVPASAQTSVDKTVPFELDKWYELNVKEGPITLHRIRLERTGGGGLKARVTGGEDEYRVPVKVELEYSNISSTDWKAVFRVSWVDESGETIDGYNGSHQLDEKKDFDRTGGTVTTLRYGIGRARKLRLLINVKPD*
Ga0099827_109208441	3300009090	Vadose Zone Soil	MVTLLAATVLAAPASAQTSVDKTVPFELDKWYELNVKEGPITLHRIRLERTGGGGLKARVTGGEDEYRVPVKVELEYTNVASSDWRVVFRISWVDDGGEAIDGYNGSHQLSEKKDFERTGGTVTTLRYGLARARKLRLLLNVKPD*
Ga0114129_100790475	3300009147	Populus Rhizosphere	MTRTSGMVILLAATVLSAPASAQTSVDKTLPFELDKWYELNVKEGPITLHRIRLERAGGGGLKARVTGGEDEYRVPVKVELEYSNVSSTDWRAVFRVSWVDEGGEAIDGYNGSHQLDEKKDFDRTGGTVTTLRYGLVRARKLRLLLSVKPD*
Ga0114129_134335891	3300009147	Populus Rhizosphere	MVTLLAATVLAAPAPASAQTSVDRTVPFELDKWYELNVKEGPVTLHRIRLERTSGGGLKARVTGGEDEYRVPVKVELEYSNISSTDWKAVFRVSWMDEGGETIDGYNGSHQLDEKKDFDRTGGTVTTLRYGIGRARKLRLLLNVKPD*
Ga0075423_102242921	3300009162	Populus Rhizosphere	MTRTPWMLTLLAATVLSAPVSAQTSVVKTLPFELDKWYELNVKEGPITLHRIRLERGAGGGLKSRVTGGEDEYRAPLKVELEYSNAASSDWRVVFRISWTDDSGEAIDGYNGSHQLSEKKDFERTGGTVMTLRYGLARARKLRLLLNIKPD*
Ga0075423_112902512	3300009162	Populus Rhizosphere	MVTLLAATVLAAPASAQTSVDKTVPFELDKWYELNVKEGPITLHRIRLERAAGGGLKARVTGGEDEYRVPVKVELEYTNVASSDWRVVFRVSWVDDGGEAIDGYNGSHQLSEKKDFERTGGTVTTLRYGLARARKVRLLLNVKPD*
Ga0105242_101375974	3300009176	Miscanthus Rhizosphere	QTGYDPPSNEGGVMTRTSWMLGVLAATVLAVPASAQTSVDRTVPFELEKWFELNVKEGPITLHRIRLERVGAGLKARVTGGEDEYRVAVKVELEYSNAASSDWRGVFRISWVDESGETIDGYNGSHELEEKKDFSRAGGTVTTLRYGLARARKLRILLNVKPD*
Ga0134127_101505013	3300010399	Terrestrial Soil	MTRTSWMLTMLAATVLAAPASAQTSVDRTVPFELDKWFELNVKEGPITLHRIRLERVGGGGLKARVTGGEDEYRVAVKVELEYSNAASSDWRGVFRISWVDESGETIDGYNGSHELEEKKDFIRTGGTVTTLRYGLSRARKLRLLLNVKPD*
Ga0134127_105413472	3300010399	Terrestrial Soil	MARTSWILTLLAAAAVLAVPASAQTSVDKTVPFELDKWYELNVKEGPITLHRLRLERTGGGGLKARVTGGEDEYRTPVKVELEYTNAASSDWRVVFRVSWVDDGGEAIDGYNGSHQLSEKKDFERTGGTVTTLRYGLARAKKLRLLLNVKPD*
Ga0134123_109352621	3300010403	Terrestrial Soil	MTRTSWMLTMLAATVLAAPASAQTSVDRTVPFELDKWFELNVKEGPITLHRIRLERVGGGGLKARVTGGEDEYRVAVKVELEYSNAASSDWRGVFRISWVDEGGETIDGYNGSHELEEKKDFNRTGGTVTTLRYGLAHARRVRLLLNVQPD*
Ga0137455_12180651	3300011429	Soil	DQRRKGGGMTRTSWMFILLTATLLAAPASAQTTVDKTVPFELDKWYELNVKEGPITLHRIRLERSGGGGLKARVTGGEDEYRIPVKIELEYSNVSSTDWRAFFSVSWLDDSGEAIDGYNGNHELEEKKDFNRAGGTVTTLRYGLVRARKVRLRLNVKPD*
Ga0137463_10642082	3300011444	Soil	MARTPWMLTLLAATVLAAPASAQTLVDKTVPFELDKWYELNVKEGPITLHRLRLERAAGGGLKSRVTGGEDEYRVPVKAELEYSNAASSDWRVVFRISWVDESGEAIDGYNGSHQLSEKKDFERASGTVTTLRYGLARAKKLRLFLSVKPD*
Ga0137365_111358461	3300012201	Vadose Zone Soil	MVSLVAVTVLSAPAPASAQASVDKTVPFELDKWYELNVKEGPITLHRIRLERAGGGGLKARVTGGEDEYRVPVKVELEYSNISSTDWKSVFRVSWMDESGETIDGYNGSHQLDEKKDFDRTGGTVTTLRYGIGRARKLRLLINVKP
Ga0137363_104702572	3300012202	Vadose Zone Soil	MPAFREGVPDMRSRKLLMTLAAAASLCAPASAQTSVDKTVPFELDKWYELNVKDGPITLHRLRLERQGGGGLKARVTHGADEEYTAQVKAELEYSNASSTDWRATFRISWVDDAGEAIDGYNGSHQLDEKKDFARTGGTVTTLKYGIAKARHLRVRIGTKPD*
Ga0137374_106222182	3300012204	Vadose Zone Soil	MVTLLAATVLAVPASAQTSVDKTVPFELDKWYELNVKEGPITLHRIRLERTGGGGLKARVTGGEDEYRMPVKVELEYSNISSTDWKAVFRVSWVDESGETIDGYNGSHQLDEKKDFDRTGGTVTTLRYGIGRARKLRLLINVKPD*
Ga0137372_102508342	3300012350	Vadose Zone Soil	MVSLVAVTVLSAPAPASAQTSVDKTVPFELDKWYELNVKEGPITLHRIRLERAGGGGLKARVTGGEDEYRVPVKVELEYSNISSTDWKSVFRVSWMDESGETIDGYNGSHQLDEKKDFDRTGGTVTTLRYGIGRARKLRLLINVKPD*
Ga0137367_102608612	3300012353	Vadose Zone Soil	MVTLLAATVSAAPASAQTSVDKTVPFELDKWYELNVKEGPITLHRIRLERTGGGGLKARVTGGEDEYRVPVKVELEYSNISSTDWKAVFRVSWVDESGETIDGYNGSHQLDEKKDFDRTGGTVTTLRYGIGRARKLRLLINVKPD*
Ga0137375_103446751	3300012360	Vadose Zone Soil	MVTLLAATVLAVPASAQTSVDKTVPFELDKWYELNVKEGPITLHRIRLERTGGGGLKARVTGGEDEYRMPVKVELEYSNISSTDWKAVFRVSWVDESGETIDGYNGSHQLDEKKDFDRTGGTVTT
Ga0137361_101415262	3300012362	Vadose Zone Soil	MPAFREGVPDMRSRKLLMTLAAAASLCAPASAQTSVDKTVPFELDKWYELNVKDGPITLHRLRLERQGGGGLKARVTHGADEGYTAQVKAELEYSNASSTDWRATFRISWVDDAGEAIDGYNGSHQLDEKKDFARTGGTVTTLKYGIAKARHLRVRIGTKPD*
Ga0150984_1196100662	3300012469	Avena Fatua Rhizosphere	ALAILAVAALAAPAAAQTAVDKTLPFEVDKWYDLGVKEGPITLHRLHLERQGGVPLKARVAGEADEFRVPVKVELEYSNAASTDWKAVMRITWLDEQGIVIDGYNATVSVDEKKDFSRAGGTIVTLKYGLGHARKLRVLISLRPE*
Ga0137394_100290085	3300012922	Vadose Zone Soil	MVSLLAATVLAAPASAQTSVDKTVPFELDKWYELNVKEGPITLHRIRLERTGGGGLKARVTGAEDEYRVPVKVELEYSNISSTDWKAVFRVTWVDESGEAIDGYNGSHQLDEKKDFDRTGGTVTTLRYGLGRARKLRLLINVKPD*
Ga0137394_106200531	3300012922	Vadose Zone Soil	MTRTSWMVTLLAATVLAPPASAQTSVDKTVPFELDKWYELNVKEGPITLHRIRLERTGGGGLKARVTGGEDEYRVPVKVELEYSNVSSTDWKAVFRVSWVDESGEAIDGYNGSHQLDEKKDFDRTGGTVTTLRYGIGRARKLRLLINVKPD*
Ga0137410_103644482	3300012944	Vadose Zone Soil	MVTLLAATVLAAPASAQTSVDKTVPFELDKWYELNVKEGPITLHRIRLERTGGGGLKARVTGGEDEYRVPVKVELEYSNISSTDWKAVFRVSWVDESGETIDGYNGSHQLDEKKDFDRTGGTVTTLRYGIGRARKLRLLINVKPD*
Ga0164303_105708252	3300012957	Soil	VSDEIKAGYDPPSKQGGVMARTPWMLTLLAATVLAAPASAQTLVDKTVPFELDKWYELNVKEGPITLHRIRLERGAGGGLKSRVTGGEDEYHVPVKVELEYTNAASSDWRVIFRVSWTDDGGEAIDGYNGSHQLSEKKDFERASGTV
Ga0163163_108607942	3300014325	Switchgrass Rhizosphere	MTRTSWMLGVLAATVLAVPASAQTSVDRTVPFELEKWFELNVKEGPITLHRIRLERVGAGLKARVTGGEDEYRVAVKVELEYSNAASSDWRGVFRISWVDESGETIDGYNGSHELEEKKDFSRAGGTVTTLRYGLARARKLRILLTVK
Ga0157377_108961452	3300014745	Miscanthus Rhizosphere	GYDPPSNEGGVMTRTSWMLGVLAATVLAVPASAQTSVDRTVPFELEKWFELNVKEGPITLHRIRLERVGAGLKARVTGGEDEYRVAVKVELEYSNAASSDWRGVFRISWVDESGETIDGYNGSHELEEKKDFIRTGGTVTTLRYGLSRARKLRLLLNVKPD*
Ga0157376_103003672	3300014969	Miscanthus Rhizosphere	MTRTSWMLGVLAATVLAVPASAQTSVDRTVPFELEKWFELNVKEGPITLHRIRLERVGAGLKARVTGGEDEYRVAAKVELEYSNAASSDWRGVFRISWVDESGETIDGYNGSHELEEKKDFIRTGGTVTTLRYGLSRARKLRLLLNVKPD*
Ga0173480_101536122	3300015200	Soil	MTRTSWMLTMLAATVLAAPASAQTSVDRTVPFELDKWFELNVKEGPITLHRIRLERVGGGGLKARVTGGEDEYRVAVKVELEYSNAASSDWRGVFRISWVDESGETIDGYNGSHELEEKKDFSRAGGTVTTLRYGLARARKLRILLNVKPD*
Ga0137409_106765891	3300015245	Vadose Zone Soil	MVTLLAATVLAAPASAQTSVDKTVPFELDKWYELNVKEGPITLHRIRLERTGGGGLKARVTGGEDEYRVPVKVELEYSNISSTDWKAVFRVSWVDESGETIDGYNGSHQLDEKKDFDRTGGTVTTLRYGIGRAKKLRLLLNVKPD*
Ga0132258_101218464	3300015371	Arabidopsis Rhizosphere	MTRTSWMLGVLAATVLAVPASAQTSVDRTVPFELEKWFELNVKEGPITLHRIRLERVGAGLKARVTGGEDEYRVAVKVELEYSNAASSDWRGVFRISWVDESGETIDGYNGSHELEEKKDFIR
Ga0132257_1012234252	3300015373	Arabidopsis Rhizosphere	MVTLLAATVLAAPASAQTTVDKTVPFELDKWYELNVKEGPITLHRIRLERTGGGGLKARVTGGEDEYRVAVKVELEYSNAASSDWRGVFRISWVDESGETIDGYNGSHELEEKKDFIRTGGTVTTLRYGLSRARKLRLLLNVKPD*
Ga0184618_102877381	3300018071	Groundwater Sediment	MTRTSWMLTLLAATILAAPASAQTSVDKTVPFELDKWYELNVKEGPITLHRIRLERAGGGGLKARVTGGEDEYRVPVKAELEYSNVASSDWRVVFRISWVDESGEAIDGYNGSHQLSEKKDFERASGTVTTLRYGLARAKKLRLLLSIKPD
Ga0184625_101840862	3300018081	Groundwater Sediment	MRPTSWMVTLLAATVLTAPASAQTSVDKTVPFELDKWFELNVKEGPITLHRIRLERTGGGGLKARVTGAEDEYRVPVKVELEYSNVSSTDWKAVFRVSWVDDSGEAIDGYNGSHQLDEKKDFDRTGGTVTTLRYGIARARKLRLLISVKPD
Ga0184628_100866402	3300018083	Groundwater Sediment	MTLNRSFVLAFVFAAARAAPASAQPTVDKTLPFELDKWYELNVKEGPITLHRLRIERQGGVPLKARVAGSDDEFRVPVKVEIEYSNSASTDWKAVVRLTWLDEHGDLIDGYNGTAGLDEKKDFNRSGGTVVTLKYGLAHARKLRVLINTRPE
Ga0190272_130817962	3300018429	Soil	MLAAAALAGPASAQNAINKVVPFEIDKWYELNVKEGPITLHRVRIERQGGVPLKARVAGSDDEFRVQVTVELEYSNASSTEWRGIVRITWLDDRGELIDGYNGSSELEEKKDFDRVGGTVVTLRYGLAQARKLRMLVTVRPD
Ga0222622_100704091	3300022756	Groundwater Sediment	MRPTSWMVTLLAATVLTAPASAQTSVNKTVAFELDKWYELNVKEGPITLHRIRLERAGGGGLKARVIGGEDEYRVPVKVELEYSNISSTDWKAVFQVSWVDEGGEAIDGYYGSHQLDEKKDFDRTGGTVTTLRYGLARARKLRLLLNVKPD
Ga0247792_10667542	3300022880	Soil	MTRTSWMLSVLAATVLAVPASAQTSVDRTVPFELDKWFELNVKEGPVTLHRIHLERVGGGLKAHVTGGETEYRVPVKVEIEYSNAASSDWRGVFRISWVDESGETIDGYNGSHELEEKKDFSRAGGTV
Ga0207653_100231862	3300025885	Corn, Switchgrass And Miscanthus Rhizosphere	MRPTSWMVTLLAATVLAAPASAQTSVDKTVPFELDKWYELNVKEGPITLHRIRLERTGGGGLKARVTGGEDEYRVPVKVELEYTNVASSDWRVVFRISWVDDGGEAIDGYNGSHQLSEKKDFERTGGTVTTLRYGIGRARKLRLLLNVKPD
Ga0207642_102342441	3300025899	Miscanthus Rhizosphere	MTRTSWMLGVLAATVLAVPASAQTSVDRTVPFELEKWFELNVKEGPITLHRIRLERVGAGLKARVTGGEDEYRVAVKVELEYSNAASSDWRGVFRISWVDESGETIDGYNGSHELEEKKDFIRTGGTVTTLRYGLSRARKLRLLLNVKPD
Ga0207684_100175753	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MRPTSWMVTLLAATVLAAPASAQTSVDKTVPFELDKWYELNVKEGPITLHRIRLERTAGGGLKARVTGGEDEYRVPVKVELEYTNVASSDWRVVFRISWVDDGGEAIDGYNGSHQLSEKKDFERTGGTVTTLRYGLARARKLRLLLNVKPD
Ga0207644_107335111	3300025931	Switchgrass Rhizosphere	RTSWMLGVLAAAAAVLAVPASAQTSVDRTVPFELEKWFELNVKEGPITLHRIRLERVGAGLKARVTGGEDEYRVAVKVELEYSNAASSDWRGVFRISWVDESGETIDGYNGSHELEEKKDFIRTGGTVTTLRYGLSRARKLRLLLNVKPD
Ga0207706_115246761	3300025933	Corn Rhizosphere	MTRTSWMLSVLAATVLAVPASAQTSVDRTVPFELDKWFELNVKEGPVTLHRIHLERVGGGLKAHVTGGETEYRVPVKVEIEYSNAASSDWRGVFRISWVDESGETIDGYNGSHELEEKKDFSRAGGTVTTLR
Ga0207670_112810841	3300025936	Switchgrass Rhizosphere	MTRTTWMLTLLAATVLAAPASAQTSVDKTLPFELDKWYELNVKEGPITLHRIRLERAAGGGLKSRVTGGEDEYRAPLKVELEYTNAASSDWRVVFHISWLDESGEAIDGYNGSHQLSEKKDFERTGGSVMTLRYGLA
Ga0207689_109112532	3300025942	Miscanthus Rhizosphere	MARTSWMLTLLVAAVLAAPASAQTSVDKTVPFELDKWYELNVKEGPITLHRIRFERGAGGGLKSRVTGGEDEYRVPVKAELEYSNAASSDWRVVFRISWVDESGEAIDGYNGSHQLSEKKDFERASGTVTTLRYGLTRAKKLRLFLSVKPD
Ga0207651_107339021	3300025960	Switchgrass Rhizosphere	RTSWMLGVLAATVLAVPASAQTSVDRTVPFELEKWFELNVKEGPITLHRIRLERVGAGLKARVTGGEDEYRVAVKVELEYSNAASSDWRGVFRISWVDESGETIDGYNGSHELEEKKDFIRTGGTVTTLRYGLSRARKLRLLLNVKPD
Ga0207668_106071922	3300025972	Switchgrass Rhizosphere	MTRTSWMLSVLAATVLAVPASAQTSVDRTVPFELDKWFELNVKEGPVTLHRIHLERVGGGLKAHVTGGETEYRVPVKVEIEYSNAASSDWRGVFRISWVDESGETIDGYNGSHELEEKKDFSRAGGTVTTLRYGLARARKLRILLNVKPD
Ga0207703_120502521	3300026035	Switchgrass Rhizosphere	MTRTSWMFTLLAATVLAAPASAQTLVDKTVPFELDKWYELNVKEGPITLHRIRLERAGGGGLKARVTGGEDEYRVPVKAELEYSNVASSDWRVVFRISWVDDGGEAIDGYNGSHQLSEKKDFERASGTVTTLRYGLARAKKLRVFLSVKPD
Ga0207639_119999031	3300026041	Corn Rhizosphere	MTRTSWMLGVLAATVLAVPASAQTSVDRTVPFELEKWFELNVKEGPITLHRIRLERVGAGLKARVTGGEDEYRVAVKVELEYSNAASSDWRGVFRISWVDESGETIDGYNGSHELEEKKDFIRTG
Ga0207674_115942261	3300026116	Corn Rhizosphere	MTRTSWMLSVLAATVLAVPASAQTSVDRTVPFELEKWFELNVKEGPITLHRIRLERVGAGLKARVTGGEDEYRVAVKVELEYSNAASSDWRGVFRISWVDESGETIDGYNGSHELEEKKDFIRTGGTVTTLRYGLS
Ga0207675_1000929282	3300026118	Switchgrass Rhizosphere	MTRTSWMLSVLAATVLAVPASAQTSVDRTVPFELDKWFELNVKEGPVTLHRIHLERVGGGLKAHVTGGETEYRVPVKVEIEYSNAASSDWRGVFRISWVDESGETIDGYNGSHELEEKKDFSRAGGTVTTLRYGLARARKLRILLTVKPD
Ga0209240_10056165	3300026304	Grasslands Soil	MRPTSWMVTLLAATVLAAPASAQTSVDKTVPFELDKWYELNVKEGPITLHRIRLERTGGGGLKARVTGGEDEYRVPVKVELEYTNVASSDWRVVFRISWVDDGGEAIDGYNGSHQLSEKKDFERTGGTVTTLRYGLARARKLRLLLNVKPD
Ga0209647_10440233	3300026319	Grasslands Soil	MKPTSWMVTLLAATVLSAPAPASAQTSVDKTVPFELDKWYELNVKEGPITLHRIRLERTGGGGLKARVTGGEDEYRVPVKVELEYSNISSTDWKSVFRVSWMDESGETIDGYNGSHQLDEKKDFDRTGGTVTTLRYGIGRARKLRLLINVKPD
Ga0209180_101955592	3300027846	Vadose Zone Soil	MRLRTSLMTLAAAAALVAPAAAQTLVDKTLPFELDKWYELKATDGPITLHRLRLERQGGGGLKARVTRGADEEYAAPVKVELEYSNAASTDWRAVFRITWVDDAGETIDGYNGSHQLDEKKDFARTGGTVTTLKYGLAKARRLRVLLSVKPD
Ga0209813_100106212	3300027866	Populus Endosphere	MTRTSWMLSVLAATVLAVPASAQTSVDRTVPFELDKWFELNVKEGPVTLHRIHLERVGGGLKAHVTGGETEYRVPVKVEIEYSNAASSDWRGVFRISWVDEAGETIDGYNGSHELEEKKDFSRAGGTVTTLRYGLARARKLRILLTVKPD
Ga0209382_1000110411	3300027909	Populus Rhizosphere	MTRTSGMVILLAATVLSAPASAQTSVDKTLPFELDKWYELNVKEGPITLHRIRLERAGGGGLKARVTGGEDEYRVPVKVELEYSNVSSTDWRAVFRVSWVDEGGEAIDGYNGSHQLDEKKDFDRTGGTVTTLRYGLARARKLRLLLSVKPD
Ga0209382_100480822	3300027909	Populus Rhizosphere	MTRTSWMVTLLAAVLAAPASAQTSVDKTVPFELDKWYELNVKEGPITLHRIRLERSGGGGLKARVSGGEDEYRIPVKVELEYSNVSSSDWRAVFRISWVDDGGEAIDGYNGSHELEEKKDFSRAGGTVTTLRYGLIRARKVRFLLNVKPD
Ga0209382_110898141	3300027909	Populus Rhizosphere	MRPTSWMVTLLAATVLTAPASAQTSVDKTVPFELDKWYELNVKEGPITLHRIRLERTGGGGLKARVTGAEDEYRVPVKVELEYSNVASSDWRVLFRVSWVDDGGEAIDGYNGSHQLSEKKDFERTGGTVTTLRYGIGRARKLRLLLSVKPD
Ga0307282_105591771	3300028784	Soil	ASAQTSVDKTVAFELDKWYELNMKEGPITLHRIRLERVGGGGLKARVTGGEDEYRVPVKVELEYSNVASSDWRVVFRVSWVDDGGEAIDGYNGSHQLSEKKDFERTGGTVTTLRYGLTRAKKLRLLLNVKPD
Ga0307503_106527472	3300028802	Soil	MTLNRSFLLASLFTAALAAPASAQPTVDKTLPFELDKWYELDVKEGPITLHRFRIERQGGVPLKARVAGSDDEFRVPVKVEIEYSNSASTDWKAVVRLTWLDEHGDLIDGYNGTAGLDEKKDFNRSGGTVVTLKYGLAHARKLRVLINTRPE
Ga0307281_100373511	3300028803	Soil	MTRTSWIFTLLAATVLAAPASAQTSVDKTVPFELDKWYELNVKEGPITLHRIRLERAGGGGLKARVTGGEDEYRAQVKVDLEYSNVASADWRVVFRISWLDDGGETIDGYNGSHELEEKKDFNRTGGTVTTLRYGLARARKLRLLLNVKPD
Ga0307312_104737212	3300028828	Soil	MRPTSWMVTLLAATVLAAPASAQTSVDKTVPFELDKWYELNVKEGPITLHRIRLERTGGGGLKARVTGGEDEYRVPVKVELEYSNISSTDWKAVFRVSWVDESGETIDGYNGSHQLDEKKDFDRTGGTVTTLKYGIG
Ga0307312_107203992	3300028828	Soil	MTRTSWMVSLLAVTVLAAPASAQTSVDKTVAFELDKWYELNMKEGPITLHRIRLERVGGGGLKARVTGGEDEYRVPVKVELEYSNVASSDWRVVFRVSWVDDGGEAIDGYNGSHQLSEKKDFERTGGTVTTLRYGLTRAKKLRLLLNVKPD
Ga0307289_101279812	3300028875	Soil	MRPTSWMVTLLAATVLTAPASGQTSVNKTVAFELDKWYELNVKEGPITLHRIRLERAGGGGLKARVIGGEDEYRVPVKVELEYSNISSTDWKAVFQVSWVDEGGEAIDGYYGSHQLDEKKDFDRTGGTVTTLRYGLARARKLRLLLNVKPD
Ga0247826_103078031	3300030336	Soil	MTRTSWMLSVLAATVLAVPASAQTSVDRTVPFELDKWFELNVKEGPVTLHRIHLERVGGGLKAHVTGGETEYRVPVKVEIEYSNAASSDWRGVFRISWVDESGETIDGYNGSHELEEKKDFNRTGGTVTTLRYGLARARKLRLLLN
Ga0307498_101198581	3300031170	Soil	MARTPWMLTLLAATVLAAPASAQTLVDKTVPFELDKWYELDVKEGPITLHRLRLERAPGGGLKSRVTGGEDEYRVPVKAELEYSNAASSDWRVVFRISWVDESGEAIDGYNGSHQLSEKKDFERASGTVTTLRYGLARAKKLRLLLSIKPD
Ga0307497_105888121	3300031226	Soil	AQTLVDKTVPFELDKWYELNAKEGPITLHRIRLDRAGGGGLKARVTGGEDEYRVPVKAELEYSNAASSDWRVAFRISWVDESGEAIDGYTGSHQLSEKKDFERASGTVTTLRYGLARAKKLRLFLSIKPD
Ga0308194_102085102	3300031421	Soil	MRPTSWMVTLLAATVLAAPASAQTSVDKTVPFELDKWYELNVKEGPITLHRIRLERVGGGGLKARVTGGEDEYRVPVKVELEYSNVSSTDWRAVFRVSWVDESGEAIDGYNGSHQLDEKKDFDRTGGTVTTLKYGIGRARKLRLLINVKPD
Ga0307468_1013990671	3300031740	Hardwood Forest Soil	AATVLAVPASAQTSVDRTVPFELEKWFELNVKEGPITLHRIRLERGAGGGLKSRVTGGEDEYRVPVKVELEYTNAASSDWRVVFRVSWTDDGGEAIDGYNGSHQLSEKKDFERSGGTVMTLRYGLARARKLRLLLNVKPD
Ga0310885_101088042	3300031943	Soil	ASAQTSVDRTVPFELEKWFELNVKEGPITLHRIRLERVGAGLKARVTGGEDEYRVAVKVELEYSNAASSDWRGVFRISWVDESGETIDGYNGSHELEEKKDFIRTGGTVTTLRYGLSRARKLRLLLNVKPD
Ga0310902_105119202	3300032012	Soil	QTSVDRTVPFELEKWFELNVKEGPITLHRIRLERVGAGLKARVTGGEDEYRVAVKVELEYSNAASSDWRGVFRISWVDESGETIDGYNGSHELEEKKDFIRTGGTVTTLRYGLSRARKLRLLLNVKPD
Ga0310906_100648322	3300032013	Soil	MTRTSWMLGVLAATVLAVPASAQTSVDRTVPFELEKWFELNVKEGPITLHRIRLERVGAGLKARVTGGEDEYRVAVKVELEYSNAASSDWRGVFRISWVDESGETIDGYNGSHELEEKKDFIRTGGT

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F078897

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences