Metagenome / Metatranscriptome Family F078848

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F078848
Family Type	Metagenome / Metatranscriptome
Number of Sequences	116
Average Sequence Length	67 residues
Representative Sequence	VSSEVDVAAPGIGLPEGDEVEAEAGLWRRAYDNVRTGNLGILPIVIGLAFIVVFFSFKATNFFTAD
Number of Associated Samples	103
Number of Associated Scaffolds	116

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	100.00 %
% of genes near scaffold ends (potentially truncated)	99.14 %
% of genes from short scaffolds (< 2000 bps)	86.21 %
Associated GOLD sequencing projects	101
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.38

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (59.483 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (30.172 % of family members)
Environment Ontology (ENVO)	Unclassified (29.310 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (59.483 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 47.87% β-sheet: 0.00% Coil/Unstructured: 52.13%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.38
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.38
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 116 Family Scaffolds
PF00005	ABC_tran	75.86
PF13407	Peripla_BP_4	8.62
PF01408	GFO_IDH_MocA	1.72
PF01565	FAD_binding_4	0.86
PF02894	GFO_IDH_MocA_C	0.86
PF01399	PCI	0.86
PF13476	AAA_23	0.86
PF00106	adh_short	0.86

COG ID	Name	Functional Category	% Frequency in 116 Family Scaffolds
COG0673	Predicted dehydrogenase	General function prediction only [R]	0.86

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	59.48 %
Unclassified	root	N/A	40.52 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	59.48 %
Unclassified	root	N/A	40.52 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	59.48 %
Unclassified	root	N/A	40.52 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	50.86 %
Unclassified	root	N/A	40.52 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	50.00 %
Unclassified	root	N/A	40.52 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.86 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	40.52 %
Thermoleophilia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	30.17 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	11.21 %
Thermomicrobia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia	0.86 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	40.52 %
Solirubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	30.17 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	10.34 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.86 %
Thermomicrobia incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia → Thermomicrobia incertae sedis	0.86 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	40.52 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	10.34 %
Solirubrobacteraceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae	6.90 %
Thermorudis	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia → Thermomicrobia incertae sedis → Thermorudis	0.86 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.86 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	40.52 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	10.34 %
Solirubrobacter	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter	3.45 %
environmental samples	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → environmental samples	3.45 %
Thermorudis peleae	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia → Thermomicrobia incertae sedis → Thermorudis → Thermorudis peleae	0.86 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.86 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	40.52 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	10.34 %
uncultured Solirubrobacteraceae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → environmental samples → uncultured Solirubrobacteraceae bacterium	3.45 %
unclassified Solirubrobacter	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → unclassified Solirubrobacter	0.86 %
Thermorudis peleae	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia → Thermomicrobia incertae sedis → Thermorudis → Thermorudis peleae	0.86 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.86 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	40.52 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	10.34 %
uncultured Solirubrobacteraceae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → environmental samples → uncultured Solirubrobacteraceae bacterium	3.45 %
Solirubrobacter sp. URHD0082	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → unclassified Solirubrobacter → Solirubrobacter sp. URHD0082	0.86 %
Thermorudis peleae	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia → Thermomicrobia incertae sedis → Thermorudis → Thermorudis peleae	0.86 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.86 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000956\|JGI10216J12902_101623403	All Organisms → cellular organisms → Bacteria	876	Open in IMG/M
3300000956\|JGI10216J12902_109030692	All Organisms → cellular organisms → Bacteria	542	Open in IMG/M
3300001334\|A2165W6_1036484	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	975	Open in IMG/M
3300004081\|Ga0063454_100144689	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1245	Open in IMG/M
3300004114\|Ga0062593_100391815	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1237	Open in IMG/M
3300004114\|Ga0062593_101873384	All Organisms → cellular organisms → Bacteria	662	Open in IMG/M
3300004156\|Ga0062589_102170340	All Organisms → cellular organisms → Bacteria	568	Open in IMG/M
3300004479\|Ga0062595_100655619	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	832	Open in IMG/M
3300004479\|Ga0062595_101094776	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	696	Open in IMG/M
3300004480\|Ga0062592_100273741	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1257	Open in IMG/M
3300005093\|Ga0062594_103318445	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	506	Open in IMG/M
3300005343\|Ga0070687_100610035	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	751	Open in IMG/M
3300005468\|Ga0070707_102233287	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	515	Open in IMG/M
3300005536\|Ga0070697_100574587	All Organisms → cellular organisms → Bacteria	989	Open in IMG/M
3300005540\|Ga0066697_10355637	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	853	Open in IMG/M
3300005544\|Ga0070686_101374880	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	592	Open in IMG/M
3300005547\|Ga0070693_101328161	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	557	Open in IMG/M
3300005558\|Ga0066698_10284528	All Organisms → cellular organisms → Bacteria	1145	Open in IMG/M
3300005615\|Ga0070702_100007960	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter	5107	Open in IMG/M
3300006046\|Ga0066652_100395462	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1257	Open in IMG/M
3300006047\|Ga0075024_100334412	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	752	Open in IMG/M
3300006237\|Ga0097621_101677411	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	605	Open in IMG/M
3300006575\|Ga0074053_10017162	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	957	Open in IMG/M
3300006575\|Ga0074053_10017991	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	691	Open in IMG/M
3300006755\|Ga0079222_10232709	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1141	Open in IMG/M
3300006914\|Ga0075436_100561343	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	839	Open in IMG/M
3300009012\|Ga0066710_101915507	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	886	Open in IMG/M
3300009137\|Ga0066709_101061971	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1189	Open in IMG/M
3300009147\|Ga0114129_13330380	Not Available	519	Open in IMG/M
3300010047\|Ga0126382_11335067	Not Available	650	Open in IMG/M
3300010111\|Ga0127491_1066905	Not Available	665	Open in IMG/M
3300010154\|Ga0127503_10015267	Not Available	504	Open in IMG/M
3300010154\|Ga0127503_10159975	Not Available	681	Open in IMG/M
3300010320\|Ga0134109_10331314	Not Available	593	Open in IMG/M
3300010322\|Ga0134084_10419975	Not Available	526	Open in IMG/M
3300010337\|Ga0134062_10633780	Not Available	554	Open in IMG/M
3300010366\|Ga0126379_10431942	All Organisms → cellular organisms → Bacteria	1373	Open in IMG/M
3300010371\|Ga0134125_11993964	Not Available	631	Open in IMG/M
3300010396\|Ga0134126_11718501	Not Available	689	Open in IMG/M
3300010400\|Ga0134122_11941985	Not Available	625	Open in IMG/M
3300011107\|Ga0151490_1023551	Not Available	707	Open in IMG/M
3300012019\|Ga0120139_1199954	Not Available	530	Open in IMG/M
3300012203\|Ga0137399_11091715	Not Available	672	Open in IMG/M
3300012208\|Ga0137376_10584686	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → environmental samples → uncultured Solirubrobacteraceae bacterium	967	Open in IMG/M
3300012355\|Ga0137369_10957423	Not Available	571	Open in IMG/M
3300012355\|Ga0137369_11124949	Not Available	511	Open in IMG/M
3300012356\|Ga0137371_10458263	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	986	Open in IMG/M
3300012402\|Ga0134059_1317709	Not Available	545	Open in IMG/M
3300012469\|Ga0150984_113942948	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	2174	Open in IMG/M
3300012469\|Ga0150984_121857602	Not Available	737	Open in IMG/M
3300012532\|Ga0137373_10736622	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → environmental samples → uncultured Solirubrobacteraceae bacterium	732	Open in IMG/M
3300012958\|Ga0164299_10216348	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1120	Open in IMG/M
3300012958\|Ga0164299_10983152	Not Available	620	Open in IMG/M
3300012961\|Ga0164302_10427529	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	913	Open in IMG/M
3300012975\|Ga0134110_10439087	Not Available	585	Open in IMG/M
3300012977\|Ga0134087_10320895	Not Available	732	Open in IMG/M
3300014325\|Ga0163163_12298946	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia → Thermomicrobia incertae sedis → Thermorudis → Thermorudis peleae	598	Open in IMG/M
3300014745\|Ga0157377_10773693	Not Available	705	Open in IMG/M
3300014829\|Ga0120104_1063398	Not Available	709	Open in IMG/M
3300015077\|Ga0173483_10094256	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → unclassified Solirubrobacter → Solirubrobacter sp. URHD0082	1235	Open in IMG/M
3300015356\|Ga0134073_10155313	Not Available	727	Open in IMG/M
3300015372\|Ga0132256_103051943	Not Available	563	Open in IMG/M
3300017659\|Ga0134083_10066234	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1382	Open in IMG/M
3300018027\|Ga0184605_10198560	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	910	Open in IMG/M
3300018054\|Ga0184621_10222377	Not Available	676	Open in IMG/M
3300018061\|Ga0184619_10004568	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	5141	Open in IMG/M
3300018468\|Ga0066662_10100768	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	2044	Open in IMG/M
3300018482\|Ga0066669_12100049	Not Available	533	Open in IMG/M
3300019867\|Ga0193704_1010272	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	1878	Open in IMG/M
3300020005\|Ga0193697_1042542	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1134	Open in IMG/M
3300020006\|Ga0193735_1093917	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → environmental samples → uncultured Solirubrobacteraceae bacterium	844	Open in IMG/M
3300021080\|Ga0210382_10145083	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1014	Open in IMG/M
3300021510\|Ga0222621_1102863	Not Available	606	Open in IMG/M
3300021951\|Ga0222624_1412544	Not Available	597	Open in IMG/M
3300022756\|Ga0222622_10008873	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter	4683	Open in IMG/M
3300022756\|Ga0222622_10079452	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	1957	Open in IMG/M
3300023058\|Ga0193714_1065057	Not Available	512	Open in IMG/M
3300026078\|Ga0207702_10783567	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	942	Open in IMG/M
3300026298\|Ga0209236_1106970	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1251	Open in IMG/M
3300026312\|Ga0209153_1022403	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	2095	Open in IMG/M
3300026550\|Ga0209474_10060918	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	2659	Open in IMG/M
3300027577\|Ga0209874_1013372	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	2393	Open in IMG/M
3300028713\|Ga0307303_10064655	Not Available	796	Open in IMG/M
3300028714\|Ga0307309_10145421	Not Available	596	Open in IMG/M
3300028715\|Ga0307313_10029935	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	1531	Open in IMG/M
3300028716\|Ga0307311_10247652	Not Available	529	Open in IMG/M
3300028718\|Ga0307307_10036402	All Organisms → cellular organisms → Bacteria	1413	Open in IMG/M
3300028719\|Ga0307301_10196819	Not Available	654	Open in IMG/M
3300028744\|Ga0307318_10045570	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	1447	Open in IMG/M
3300028744\|Ga0307318_10114505	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	917	Open in IMG/M
3300028755\|Ga0307316_10189040	Not Available	740	Open in IMG/M
3300028771\|Ga0307320_10066690	All Organisms → cellular organisms → Bacteria	1341	Open in IMG/M
3300028771\|Ga0307320_10238569	Not Available	715	Open in IMG/M
3300028771\|Ga0307320_10396673	Not Available	553	Open in IMG/M
3300028784\|Ga0307282_10101930	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → environmental samples → uncultured Solirubrobacteraceae bacterium	1332	Open in IMG/M
3300028787\|Ga0307323_10022872	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	2145	Open in IMG/M
3300028791\|Ga0307290_10004764	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	4404	Open in IMG/M
3300028793\|Ga0307299_10028401	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	2027	Open in IMG/M
3300028807\|Ga0307305_10379619	Not Available	639	Open in IMG/M
3300028824\|Ga0307310_10313318	Not Available	765	Open in IMG/M
3300028875\|Ga0307289_10004349	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	5559	Open in IMG/M
3300028880\|Ga0307300_10006081	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3050	Open in IMG/M
3300028881\|Ga0307277_10182839	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	916	Open in IMG/M
3300028884\|Ga0307308_10010288	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter	4144	Open in IMG/M
3300030993\|Ga0308190_1007390	All Organisms → cellular organisms → Bacteria	1505	Open in IMG/M
3300031081\|Ga0308185_1059367	Not Available	504	Open in IMG/M
3300031093\|Ga0308197_10033747	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1222	Open in IMG/M
3300031114\|Ga0308187_10341323	Not Available	575	Open in IMG/M
3300031170\|Ga0307498_10003257	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	2683	Open in IMG/M
3300031231\|Ga0170824_110464468	Not Available	837	Open in IMG/M
3300031446\|Ga0170820_11554107	Not Available	864	Open in IMG/M
3300031474\|Ga0170818_108872582	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1548	Open in IMG/M
3300031707\|Ga0315291_10871667	Not Available	774	Open in IMG/M
3300032074\|Ga0308173_11015694	Not Available	771	Open in IMG/M
3300032180\|Ga0307471_102035282	Not Available	721	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	92.24%
Host-Associated	Host-Associated	7.76%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	81.03%
Aquatic	Environmental → Aquatic	11.21%
Plants	Host-Associated → Plants	7.76%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	81.03%
Sediment	Environmental → Aquatic → Sediment	6.90%
Rhizosphere	Host-Associated → Plants → Rhizosphere	5.17%
Freshwater	Environmental → Aquatic → Freshwater	4.31%
Roots	Host-Associated → Plants → Roots	1.72%
Rhizoplane	Host-Associated → Plants → Rhizoplane	0.86%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	74.14%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	6.90%
Loam	Environmental → Terrestrial → Soil → Loam	6.03%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	2.59%
Soil	Host-Associated → Plants → Rhizosphere → Soil	2.59%
Sediment	Environmental → Aquatic → Freshwater → Sediment	1.72%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	1.72%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	1.72%
Lake	Environmental → Aquatic → Freshwater → Lake	0.86%
Sand	Environmental → Terrestrial → Soil → Sand	0.86%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	0.86%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	50.00%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	10.34%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	6.90%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	6.90%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	5.17%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	3.45%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	2.59%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	2.59%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	2.59%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	1.72%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	1.72%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	1.72%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	0.86%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	0.86%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.86%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	0.86%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	0.86%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	30.17%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	7.76%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	6.03%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	6.03%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	5.17%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	4.31%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	3.45%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	3.45%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	2.59%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.59%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	2.59%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost	2.59%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	2.59%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	1.72%
Soil	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil	1.72%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	1.72%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	1.72%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	1.72%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	1.72%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment	0.86%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.86%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.86%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.86%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	0.86%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.86%
Groundwater Sand	Environmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand	0.86%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.86%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	0.86%
Switchgrass Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere	0.86%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.86%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.86%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300001334	Permafrost active layer microbial communities from McGill Arctic Research Station, Canada - (A21-65cm)- 6 month illumina	Environmental	Open in IMG/M
3300004081	Grasslands soil microbial communities from Hopland, California, USA - 2 (version 2)	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004156	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1	Environmental	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300004480	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4	Environmental	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005343	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005540	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_146	Environmental	Open in IMG/M
3300005544	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG	Environmental	Open in IMG/M
3300005547	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG	Environmental	Open in IMG/M
3300005558	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147	Environmental	Open in IMG/M
3300005615	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG	Environmental	Open in IMG/M
3300006046	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101	Environmental	Open in IMG/M
3300006047	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2013	Environmental	Open in IMG/M
3300006237	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2)	Host-Associated	Open in IMG/M
3300006575	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLAA (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006914	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5	Host-Associated	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010111	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Met_40_2_24_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010154	Soil microbial communities from Willow Creek, Wisconsin, USA - WC-WI-TBF metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010320	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_11112015	Environmental	Open in IMG/M
3300010322	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010337	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09082015	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010371	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1	Environmental	Open in IMG/M
3300010396	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2	Environmental	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300011107	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHAC (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300012019	Permafrost microbial communities from Nunavut, Canada - A7_5cm_12M	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012355	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_113_16 metaG	Environmental	Open in IMG/M
3300012356	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaG	Environmental	Open in IMG/M
3300012402	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_5_8_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012532	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_80_16 metaG	Environmental	Open in IMG/M
3300012958	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MG	Environmental	Open in IMG/M
3300012961	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MG	Environmental	Open in IMG/M
3300012975	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_11112015	Environmental	Open in IMG/M
3300012977	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300014325	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG	Host-Associated	Open in IMG/M
3300014745	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG	Host-Associated	Open in IMG/M
3300014829	Permafrost microbial communities from Nunavut, Canada - A10_35cm_6M	Environmental	Open in IMG/M
3300015077	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S178-409R-2 (version 2)	Environmental	Open in IMG/M
3300015356	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300017659	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300018027	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_coex	Environmental	Open in IMG/M
3300018054	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_b1	Environmental	Open in IMG/M
3300018061	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_b1	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300019867	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U3m1	Environmental	Open in IMG/M
3300020005	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L3m2	Environmental	Open in IMG/M
3300020006	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1m2	Environmental	Open in IMG/M
3300021080	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_coex redo	Environmental	Open in IMG/M
3300021510	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_coex	Environmental	Open in IMG/M
3300021951	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_30 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300022756	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1	Environmental	Open in IMG/M
3300023058	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2m1	Environmental	Open in IMG/M
3300026078	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026298	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_1_40cm (SPAdes)	Environmental	Open in IMG/M
3300026312	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_120 (SPAdes)	Environmental	Open in IMG/M
3300026550	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145 (SPAdes)	Environmental	Open in IMG/M
3300027577	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N1_20_30 (SPAdes)	Environmental	Open in IMG/M
3300028713	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_184	Environmental	Open in IMG/M
3300028714	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_196	Environmental	Open in IMG/M
3300028715	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_203	Environmental	Open in IMG/M
3300028716	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_198	Environmental	Open in IMG/M
3300028718	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_194	Environmental	Open in IMG/M
3300028719	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_182	Environmental	Open in IMG/M
3300028744	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_367	Environmental	Open in IMG/M
3300028755	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_356	Environmental	Open in IMG/M
3300028771	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_369	Environmental	Open in IMG/M
3300028784	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_121	Environmental	Open in IMG/M
3300028787	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_381	Environmental	Open in IMG/M
3300028791	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_144	Environmental	Open in IMG/M
3300028793	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_159	Environmental	Open in IMG/M
3300028807	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_186	Environmental	Open in IMG/M
3300028824	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_197	Environmental	Open in IMG/M
3300028875	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_143	Environmental	Open in IMG/M
3300028880	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_181	Environmental	Open in IMG/M
3300028881	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_116	Environmental	Open in IMG/M
3300028884	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_195	Environmental	Open in IMG/M
3300030993	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_185 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031081	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_159 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031093	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_198 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031114	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_182 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031170	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 12_S	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031446	Fir Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031474	Fir Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031707	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G12_20	Environmental	Open in IMG/M
3300032074	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.P.R1	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI10216J12902_1016234032	3300000956	Soil	VSTDVDVAAPGIGLPEGDQTGVQVGLWRRAYDNVRTGNLGILPIVIGLAFIVVFFSFKATNFFT
JGI10216J12902_1090306922	3300000956	Soil	VSSDVDIAAPGIGLPEGDESETQSGLWRRAYDNVRTGNLGILPIVIGLAFIVVFFSFKATNFF
A2165W6_10364841	3300001334	Permafrost	VSSEVDIAAPGIGLPEEQEGEEERGLWGRAVDNLKTGNLGVLPIVIGLALIVVFFSFKATNFFTADNFNNICLLYTSPSPRD*
Ga0063454_1001446893	3300004081	Soil	VSTDVDVAAPGIGLPEGDEAGVHVGLWRRAYDNVRTGNLGILPIVIGLAFIVVFFSFKATNFFTADNFN
Ga0062593_1003918153	3300004114	Soil	VSTDVDVAAPGIGLPEGDEAGVQVGLWRRAYDNVRTGNLGILPIVIGLAFIVVFFSFKATNFFTADNFN
Ga0062593_1018733841	3300004114	Soil	VSSDVEIAAPGIGLPEGDEAEPEAGLWRRAYDNVRTGNLGILPIVIGFAFIVVFFSF
Ga0062589_1021703401	3300004156	Soil	VSSEVEIAAPGIGLPEGDEVEAQAGLWRRAYDNLRTGNLGVLPIVIGLAFIVVFFSFK
Ga0062595_1006556192	3300004479	Soil	VSTDFDVAAPGIGLPEGEEADARPGLWRRAYDNVRTGNLGILPIVIGFAFIVVFFSFKATNFFTADNFN
Ga0062595_1010947762	3300004479	Soil	VSSDVDVAAPGIGLPEGDEIEAQAGLWRRAYDNLRTGNLGILPIVIGLALIVVFFSFKATNFFTADNFN
Ga0062592_1002737411	3300004480	Soil	VSTDVDVAAPGIGLPEGDEAGVQVGLWRRAYDNVRTGNLGILPIVIGLAFIVVFFSFKATNFFTADNFNNIIVQM
Ga0062594_1033184451	3300005093	Soil	VSSEVDVVAPGIGLPEGDEAEAQAGLWRRAYENVRTGNLGVLPIVIGLAFIVVFFSFKATNFFTAD
Ga0070687_1006100351	3300005343	Switchgrass Rhizosphere	VSSDVDVAAPGIGLPEGDEAEAPSGPWRRVYDNVRTGNLGILPIVIGLAFIVVFFSFKATNFF
Ga0070707_1022332871	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	VSSDIDVAAPGIGLPEGDEAAAQAGLWRRAYDNVRTGNLGILPIVIGLAFIVVFFSFKATNFFTADNFNNIIVQM
Ga0070697_1005745871	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	VSTELDVDIAAPGIGLPEGDEAEEQAGLGRRVYDNVRTGNLGILPIVIGLAFIVVFFS
Ga0066697_103556371	3300005540	Soil	VSSEVDVAAPGIGLPEGDEAETQASLSRRAYDNLKAGNLGILPIVIGLALIVVFFSF
Ga0070686_1013748802	3300005544	Switchgrass Rhizosphere	VSSEVEIAAPGIGLPEGDETEAQSGLWRRAYDNLRTGNLGILPIVIGLAFIVVFFSFKATNFFTADN
Ga0070693_1013281611	3300005547	Corn, Switchgrass And Miscanthus Rhizosphere	VSTDFDVAAPGIGLPEGEEADARPGLWRRAYDNVRTGNLGILPIVIGFAFIVVFFSFKATNFFTADNFNN
Ga0066698_102845283	3300005558	Soil	VSSEADVAAPGIGLPPEQEAEVQAGVWRRALDNLRTGNLGILPIVLGLVLIVLFFTIKTPVFFTA
Ga0070702_1000079607	3300005615	Corn, Switchgrass And Miscanthus Rhizosphere	VSSDVDVAAPGIGLPEGDEAEAPSGPWRRVYDNVRTGNLGILPIVIGLAFIVVFFSFKATNFFT
Ga0066652_1003954623	3300006046	Soil	VSTDFDVAAPGIGLPEGDEAGVQVGLWRRAYDNVRTGNLGILPIVIGLAFIVVFFSFKATNFFTADNFNNIIVQM
Ga0075024_1003344122	3300006047	Watersheds	VSSQVDVAAPGIGLPEGDEVEAEAGLWRRAYNNIRTGNLGILPIVIGLAFIVVFFSFKATNFFTA
Ga0097621_1016774112	3300006237	Miscanthus Rhizosphere	VSTDFDVAAPGIGLPEGEEADARPGLWRRAYDNVRTGNLGILPIVIGFAFIVVFFSFKATNFFTA
Ga0074053_100171621	3300006575	Soil	VSTDLDVAAPGIGLPEGDEAEAEAGLWHRVYDNIRTGNLGILPIVIGLAFIVVFFSFKATNFFTADNFN
Ga0074053_100179911	3300006575	Soil	VSSEVDIAAPGIGLPEGDEVVAEAGLWRRVYDNVRTGNLGILPIVIGLAFIVVFFSFKATNFFTADNF
Ga0079222_102327091	3300006755	Agricultural Soil	VSTDLDVAAPGIGLPEGDEAGTSPGLWRRAYDNVRTGNLGILPIVIGIAFIVVFFSFKATNFF
Ga0075436_1005613432	3300006914	Populus Rhizosphere	VSSELDVAAPGIGLPAGQEAEEERGLWRRALDNLRTGNLGVLPIVLGLALIIVFFSFKATNFFTADNFNNI
Ga0066710_1019155072	3300009012	Grasslands Soil	VSSDLDVAAPGIGLPEGEVAEEQVGVWRRTYDNLRTGNLGILPIVIGLAVIVVFFSFKAT
Ga0066709_1010619713	3300009137	Grasslands Soil	VSSEVDVAAPGIGLPEGDEAEAPSGLWRRTYDNLRTGNLGILPIVIGLALIIVFFSFKATNFF
Ga0114129_133303801	3300009147	Populus Rhizosphere	VSSEVDVAAPGIGLPEGDEAETQVGLWRRAYDNLRTGNLGILPIAIGLVFIVVFFSFKATNFFTADNFNNIIVQM
Ga0126382_113350671	3300010047	Tropical Forest Soil	VTEVEAEIAAPGIGLPEGEDAEAQAGIWKRTLDNLRTGNLGVLPIVLGLLIIVVFFSFKATNF
Ga0127491_10669052	3300010111	Grasslands Soil	VSSDVDVAAPGIGLPEGDEAEAPAGLWRRAYDNLRAGNLGILPIVIGLALIVVFFSYKA
Ga0127503_100152672	3300010154	Soil	VSSEVDIAAPGIGLPEGDEVVAEAGLWRRVYDNVRTGNLGILPIVIGLAFIVVFFSFKATNFF
Ga0127503_101599751	3300010154	Soil	VSTELDVDVAAPGIGLPEGDEAEEQLGLWRRVYDNVRTGNLGILPIVIGLAFIVVFFSFKATNFFTADNFNNIIVQ
Ga0134109_103313141	3300010320	Grasslands Soil	VSSDVDVAAPGIGLPEGDEAEAPAGLWRRAYDNLRAGNLGILPIVIGLALIVVFFSYKATNFFTAD
Ga0134084_104199751	3300010322	Grasslands Soil	VSSDVDVAAPGIGLPEGDEAEAQSGLWRRAYDNLRTGNLGILPIVIGLAVIVVFFSF
Ga0134062_106337802	3300010337	Grasslands Soil	VNTEVDVAAPGIGLPEGDEAEAPSGLWRRAYDNLRTGNLGILPIVIGLAVIVVFFSFKATNFFTA
Ga0126379_104319423	3300010366	Tropical Forest Soil	VTDVTTDVDVAAPGIGLPEGEEEGTSGWWRVIWDNLRSGNLGVLPIVLGLVFIVVFFTIKTPVFFTAN
Ga0134125_119939643	3300010371	Terrestrial Soil	VSTELDVAAPGIGLPEGDEAEEQAGLWRRAYDNVRTGNLGILPIVIGLAFIVVFFSFKATNFF
Ga0134126_117185011	3300010396	Terrestrial Soil	VSSDVDVAAPGIGLPEGDEAEAPSGLWRRVYDNVRTGNLGILPIVIGLAFIVVFF
Ga0134122_119419852	3300010400	Terrestrial Soil	VSSEVDVAAPGIGLPEGDEVEAEAGLWRRAYDNVRTGNLGILPIVIGLAFIVVFFSFKATNFFTAD
Ga0151490_10235512	3300011107	Soil	VSTDLDVAAPGIGLPEGDEAEAEAGLWHRVYDNIRTGNLGILPIVIGLAFIVVFFSFKATNFFTADNF
Ga0120139_11999542	3300012019	Permafrost	VSSEVDVAAPGIGLPEGDEAEEQSGLWRRAYDNLRTGNLGVLPIVIGLAFIVVFFSFKATNFFTPD
Ga0137399_110917152	3300012203	Vadose Zone Soil	VSSEVDVAAPGIGLPEGEVAEEQVGVWRRTYDNLRTGNLGILPIAIGLAVIVVFFSFKATNFFTADNF
Ga0137376_105846862	3300012208	Vadose Zone Soil	VSSDLDVAAPGIGLPEGDEAEAPSGLWRRTYDNLRTGNLGILPIVIGLAVIVVFFSFKATNFFTADNFNNIIVQ
Ga0137369_109574231	3300012355	Vadose Zone Soil	VSSEVDVAAPGIGLPEGDEAEAQAGLWRRTYDNLKAGNLGILPIVIGLVLIVVFFSFKATNFFTADNFNNII
Ga0137369_111249492	3300012355	Vadose Zone Soil	VSSELDVAAPGIGLPEGDQAETQAGLWRRAYDNLRTGNLGILPIAIGLVLIVVFFSFK
Ga0137371_104582632	3300012356	Vadose Zone Soil	VSSDLDVAAPGIGLPEGDQAETQAGLWRRAYDNLRTGNLGILPIAIGLVLIVVFFGFKATNFFTADNFNNIIVQM
Ga0134059_13177092	3300012402	Grasslands Soil	VSTEVEVDVAAPGIGLPEGDEAEEQVGPWRRVYDNVRTGNLGILPIVIGLAFIVVFFSFKATNFFTADNF
Ga0150984_1139429483	3300012469	Avena Fatua Rhizosphere	VSSEVDIAAPGIGLPEGDEAEAQSGLGRRAYDNLRTGNLGILPIVIGLAVIVVFFSFKATNFFTADNFNNI
Ga0150984_1218576022	3300012469	Avena Fatua Rhizosphere	VSTDVDVAAPGIGLPEGDEADARPRLWRRAYDNVRTGNLGILPIVIGLAFIVVFFSFKATNFFTADNFNNII
Ga0137373_107366221	3300012532	Vadose Zone Soil	VSSEVDVAAPGIGLPEGDEAEAQAGLWRRAYDNVRTGNLGILPIVIGLAFIVVFFSFKAT
Ga0164299_102163482	3300012958	Soil	VSAEVDIAAPGISLPEGDEVEAEVGLWRRVYDNVRTGNLGILPIVIGLAFIVVFFSFKATNFFTADNFNNIIV
Ga0164299_109831522	3300012958	Soil	VSSDLDVAAPGIGLPEGDEAEAPSGPWQRVYDNIRPGNLGILPIVIGLAFIVVFFSFKATNFFTADNFN
Ga0164302_104275291	3300012961	Soil	VSSEVDIAAPGIGLPEGDEVEAEVGLWRRVYDNVRTGNLGILPIVIGLAFIVVFFSFKATNFFTADNFNNIIVQM
Ga0134110_104390872	3300012975	Grasslands Soil	VSSDVDVAAPGIGLPEGDEAEAPAGLWRRAYDNLRSGNLGILPIVIGLAFIVVFFSFKATNFFTADNFNNIIV
Ga0134087_103208952	3300012977	Grasslands Soil	VSSEVDVAAPGISLPEEQEAEEERGLWRRALDNVRAGNLGILPIVIGLALIVVFFSFKATNFFTADNF
Ga0163163_122989461	3300014325	Switchgrass Rhizosphere	VSSEVEIAAPGIGLPEGDETEAQSGLWRRAYDNLRTGNLGILPIVIGLAFIVVFFSFKATNFFTADNFNNIIVQ
Ga0157377_107736931	3300014745	Miscanthus Rhizosphere	VSSEVEIAAPGIGLPEGDETEAQSGLWRRAYDNLRTGNLGILPIVIGLVLIVVFFSFKATNFF
Ga0120104_10633981	3300014829	Permafrost	VSTEVDIAAPGIGLPEEQEGEQERGLWGRAVDNLKTGNLGVLPIVIGLALIIVFFSFKATNFFTADNFNN
Ga0173483_100942561	3300015077	Soil	VSSEVEIAAPGIGLPEGDEAEAEAGLWRRAYDNVRTGNLGILPIVIGLAFIVVFFS
Ga0134073_101553133	3300015356	Grasslands Soil	VSSDLDVAAPGIGLPEGEVAEEQLGVWRRTYDNLRTGNLGILPIVIGLAVIVVFFSFKATNFFTA
Ga0132256_1030519431	3300015372	Arabidopsis Rhizosphere	VSTDLDVAAPGIGLPEGDEAGTSPGLWRRAYDNVRTGNLGILPIVIGIAFIVVFFSFKATNFFTADNFNNIIVQM
Ga0134083_100662341	3300017659	Grasslands Soil	VSADVDVAAPGIGLPEGDEAEAQAGLWRRAYDNLRAGNLGILPIVIGLALIVVFFSFKVTNFFTADNFNNIIVQMT
Ga0184605_101985601	3300018027	Groundwater Sediment	VSSGLDVAAPGIGLPEGDEAEEETGLWRRVYDNIRTGNLGILPIVIGLAFIVVFFSFKAT
Ga0184621_102223772	3300018054	Groundwater Sediment	VSTELDLDVAAPGIGLPEGDEAEEQAGLWRRVYDNVRTGNLGILPIVIGLAFIVVFFSFKATNFFTADNF
Ga0184619_100045681	3300018061	Groundwater Sediment	VSTELDLDVAAPGIGLPEGDEAEEQAGLWRRVYDNVRTGNLGILPIVIGLAFIVVFFSFKATNFFTADNFNNIIVQM
Ga0184619_105199282	3300018061	Groundwater Sediment	VSSEVDVAVPGIGLPEADEAEQHKSVARGALDNLRSGNLGVLPVVVGEMAIVVFFSF
Ga0066662_101007683	3300018468	Grasslands Soil	VSSDVDVAAPGIGLPEGDEAEAPAGLWRRAYDNLRSGNLGILPIVIGLVFIVVFFSFKATNFFTADNFNN
Ga0066669_121000491	3300018482	Grasslands Soil	VSTELDVDVAAPGIGLPEGDEAEAPSGLWRRTYDNLRTGNLGILPIVIGLAVIVVFFSFK
Ga0193704_10102723	3300019867	Soil	VSSEVDIAAPGIGLPEGDEVEAEAGLWRRVYDNVRTGNLGILPIVIGLAFIVVFFSFKATNFFTADNFNNIIVQ
Ga0193697_10425422	3300020005	Soil	VSSGLDVAAPGIGLPEGDEAEEETGLWRRVYDNIRTGNLGILPIVIGLAFIVVFFSFKATNFFTADN
Ga0193735_10939171	3300020006	Soil	VSSEVDVAAPGIGLPEGDEAEEQSGLGRRAYDNLRTGNLGILPIVIGLAFIVVFFSFKATNFFTADN
Ga0210382_101450831	3300021080	Groundwater Sediment	VSSGLDVAAPGIGLPEGDEAEEETGLWRRVYDNIRTGNLGILPIVIGLAFIVVFFSFKATNFFT
Ga0222621_11028631	3300021510	Groundwater Sediment	VSSEVDIAAPGIGLPEGDEVEAEAGLWRRVYDNVRTGNLGILPIVIGLAFIVVFFSFKATNFFTADNF
Ga0222624_14125441	3300021951	Groundwater Sediment	VTEVEAEIAAPGIGLPEGDQPEAEKGIWQRTLDNLRTGNLGVLPIVLGLVLIVVFFGFKATNFFTADNFNNIIIQ
Ga0222622_100088731	3300022756	Groundwater Sediment	VSSGLDVAAPGIGLPEGDEAEEETGLWRRVYDNIRTGNLGILPIVIGLAFIVVFFSFKATNFFTADNFNNI
Ga0222622_100794521	3300022756	Groundwater Sediment	VSSEVDVAAPGIGLPEGDEAEVQSGLWRRAYDNLRTGNLGILPIVIGLAFIVVFFS
Ga0193714_10650572	3300023058	Soil	VSSEVDVAAPGIGLPEGDETEVQSGLWRRAYDNLRTGNLGILPIVIGLAFIVVFFSFKATNFFTADN
Ga0207702_107835672	3300026078	Corn Rhizosphere	VSSDVDVAAPGIGLPEGDEAEAPSGLWRRVYDNVRTGNLGILPIVIGLAFIVVFFSFKATNFFTA
Ga0209236_11069703	3300026298	Grasslands Soil	VSSEVDVAAPGIGLPEGDEAEAQAGLWRRTYDNLRAGNLGILPIVIGLALIVVFFSFT
Ga0209153_10224031	3300026312	Soil	VSSEVDVAAPGISLPEEQEAEEERGLWRRALDNVRTGNLGILPIVIGLALIVVFFSF
Ga0209474_100609181	3300026550	Soil	VSSEVDVAAPGIGLPEGDEAETQASLSRRAYDNLKAGNLGILPIVIGLALIVVFFSFKATNFFTA
Ga0209874_10133724	3300027577	Groundwater Sand	VSTDVDVVAPGIGLPEGQEAETELGLGRRALDNLKTGNLGVLPIVLGLALIVVFFSFKA
Ga0307303_100646552	3300028713	Soil	VTEVEAEIAAPGIGLPEGDQPEAEKGIWQRSLDNLRTGNLGVLPIVLGLVLIVVFFGFKATNFFTADN
Ga0307309_101454211	3300028714	Soil	VSSEVDVAAPGIGLPEGDEAEEQSGLWRRAYDNLRTGNLGVLPIVIGLAFIVVFF
Ga0307313_100299353	3300028715	Soil	VSSDVDVAAPGIGLPEGDEADAPRGLWRRTYDNVRTGNLGILPIAIGLVLIVVFFGFKATNFFTADNFNN
Ga0307311_102476522	3300028716	Soil	VSEVDIAAPGIGLPEGDEGETQAGVWRRAYNNVRTGNLGILPIAIGLVLIVVFFSFKATNFFTAD
Ga0307307_100364023	3300028718	Soil	VSTELDLDVAAPGIGLPEGDEAEEQAGLWRRVYDNVRTGNLGILPIVIGLAFIVVFFSFKATNFFTADN
Ga0307301_101968192	3300028719	Soil	VSTELDVAAPGIGLPEGDEAEEQAGLWRQVYDNVRTGNLGILPIVIGLAFIVVFFSFKATNFFTADNFNNI
Ga0307318_100455701	3300028744	Soil	VSSDVDVAAPGIGLPEGDEADAPRGLWRRTYDNVRTGNLGILPIAIGLVLIVVFFGF
Ga0307318_101145052	3300028744	Soil	VSSEVDVAAPGIGLPEGDEAEEQSGLGRRAYDNLRTGNLGILPIVIGLAFIVVFFSFKATNFFTADNFNNIIVQ
Ga0307316_101890401	3300028755	Soil	VSTELDLDVAAPGIGLPEGDEAEEQAGLWRRVYDNVRTGNLGILPIVIGLAFIVVFFSFKATNFFTADNFNNI
Ga0307320_100666901	3300028771	Soil	VSSEVDVAAPGIGLPEGEEVEAQSGLWRRAYDNLRTGNLGILPIVIGLAFIVVFFSFKATNFFTADNF
Ga0307320_102385692	3300028771	Soil	VSSGLDVAAPGIGLPEGDEAEEETGLWRRVYDNIRTGNLGILPIVIGLAFIVVFFSFKA
Ga0307320_103966732	3300028771	Soil	VSSEVDIAAPGIGLPEGDEAEEQSGLWRRAYDNLRTGNLGVLPIVIGLAFIVVFFSFK
Ga0307282_101019301	3300028784	Soil	VSSEVDVVAPGIGLPEGDEAEAQAGLWRRAYDNVRTGNLGVLPIVIGLAFIVVFFSFKATNFFTADNFNNIIVQMA
Ga0307323_100228721	3300028787	Soil	VSSEVDIAAPGIGLPEGDEVEAEAGLWRRVYDNVRTGNLGILPIVIGLAFIVVFFSFKA
Ga0307290_100047641	3300028791	Soil	VSTELDLDVAAPGIGLPEGDEAEEQAGLWRRVYDNVRTGNLGILPIVIGLAFIVVFFSFKATNFFTADNFNNIIVQ
Ga0307299_100284011	3300028793	Soil	VSSEVDIAAPGIGLPEGDEVEAEAGLWRRVYDNVRTGNLGILPIVIGLAFIVVFFSF
Ga0307305_103796191	3300028807	Soil	MSTELEVDVAAPGIGLPEGDEAEEQAGIWRRVYDNVRTGNLGILPIVIGLAFIVVFFSFKATNFFTADNFNNIIVQ
Ga0307310_103133181	3300028824	Soil	VSTELDVDVAAPGIGLPEGDEAEEQAGLWRRVYDNVRTGNLGILPIVIGLAFIVVFFSFKATNFFTADNFNNI
Ga0307289_100043491	3300028875	Soil	VSTELDLDVAAPGIGLPEGDEAEEQAGLWRRVYDNVRTGNLGILPIVIGLAFIVVFFSFKATNFFTADNFNNIIV
Ga0307300_100060811	3300028880	Soil	VSTELDLDVAAPGIGLPEGDEAEEQAGLWRRVYDNVRTGNLGILPIVIGLAFIVVFFSFKATNF
Ga0307277_101828392	3300028881	Soil	VSEVDIAAPGIGLPEGDEGETQAGVWRRAYNNVRTGNLGILPIAIGLVLIVVFFSFKATNFFTADNF
Ga0307308_100102885	3300028884	Soil	VSSGLDVAAPGIGLPEGDEAEEETGLWRRVYDNIRTGNLGILPIVIGLAFIVVFFSFKATNFFTADNFNNII
Ga0308190_10073901	3300030993	Soil	VSSDVDVAAPGIGLPEGDEADAPRGLWRRTYDNVRTGNLGILPIAIGLVLIVVFFGFKATNFFTADNFNNIIVQM
Ga0308185_10593671	3300031081	Soil	VSSGLDVAAPGIGLPEGDEAEEQAGLWRRVYDNVRTGNLGILPIVIGLAFIVVFFSFKATNFFTADNFNNII
Ga0308197_100337471	3300031093	Soil	VSSGLDVAAPGIGLPEGDEAEEETGLWRRVYDNIRTGNLGILPIVIGLAFIVVFFSFKATNFFTADNFNN
Ga0308187_103413232	3300031114	Soil	VSEVDIAAPGIGLPEGDEGETQAGVWRRAYNNVRTGNLGILPIAIGLVLIVVFFSFKATNFFTADNFN
Ga0307498_100032571	3300031170	Soil	VSSEVDVAAPGIGLPEGAEAEAEAGLWRRAYDNVRTGNLGILPIVIGLAFIVVFFSFKATNFFTA
Ga0170824_1104644681	3300031231	Forest Soil	VSSELDVAAPGIGLPEGAEAEAEAGFWRRAYDNVRTGNLGILPIVIGLAFIVVFFSFKATNFFTA
Ga0170820_115541072	3300031446	Forest Soil	VSSELDVAAPGIGLPEGAEAEAEAGFWRRAYDNVRTGNLGILPIVIGLAFIVVFFSFKATNFFTGNNFDN
Ga0170818_1088725821	3300031474	Forest Soil	VSSEVDVAAPGIGLPEGDEVEAEAGLWRRVYDNVRTGNLGILPIVIGLAFIVVFFSFKATNFFT
Ga0315291_108716671	3300031707	Sediment	VSSNGEVIAGVADDIAAPESDVATEHEGIWQRALANIKTGNLGVLPIVIGLVFIVTFFSFKATNFFTADNFNNVI
Ga0308173_110156941	3300032074	Soil	VSTEVDVAAPGIGLPEGDEADARPGLWHRAYDNVRTGNLGILPIVIGLAFIVVFFSFKATNFFTADNFN
Ga0307471_1020352821	3300032180	Hardwood Forest Soil	VSTELDVDVAAPGIGLPEGDEVEEQAGLWRRVYDNVRTGNLGILPIVIGLAFIVVFFSFKATNFFTADN

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F078848

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences