Metagenome / Metatranscriptome Family F078795

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F078795
Family Type	Metagenome / Metatranscriptome
Number of Sequences	116
Average Sequence Length	61 residues
Representative Sequence	VNLAAFTGTPVVVPLHANLMAIAVTAAGLIVLAWVTLAVQSRLARGRGTTQALRVGE
Number of Associated Samples	89
Number of Associated Scaffolds	116

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	0.00 %
% of genes near scaffold ends (potentially truncated)	96.55 %
% of genes from short scaffolds (< 2000 bps)	93.10 %
Associated GOLD sequencing projects	82
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.48

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (78.448 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (50.000 % of family members)
Environment Ontology (ENVO)	Unclassified (60.345 % of family members)
Earth Microbiome Project Ontology (EMPO)	Unclassified (49.138 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 49.41% β-sheet: 0.00% Coil/Unstructured: 50.59%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.48
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.48
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 116 Family Scaffolds
PF00005	ABC_tran	87.93
PF03446	NAD_binding_2	0.86
PF12697	Abhydrolase_6	0.86

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	78.45 %
Unclassified	root	N/A	21.55 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	78.45 %
Unclassified	root	N/A	21.55 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	78.45 %
Unclassified	root	N/A	21.55 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	44.83 %
Unclassified	root	N/A	21.55 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.86 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	44.83 %
Unclassified	root	N/A	21.55 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.86 %

Name	Rank	Taxonomy	Distribution
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	22.41 %
Unclassified	root	N/A	21.55 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.86 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	21.55 %
Catenulisporales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Catenulisporales	5.17 %
Streptomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales	0.86 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	0.86 %
Corynebacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales	0.86 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	21.55 %
Actinospicaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Catenulisporales → Actinospicaceae	5.17 %
Dietziaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Dietziaceae	0.86 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.86 %
Streptomycetaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	0.86 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	21.55 %
Actinospica	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Catenulisporales → Actinospicaceae → Actinospica	5.17 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	0.86 %
Dietzia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Dietziaceae → Dietzia	0.86 %
Bradyrhizobium sediminis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium sediminis	0.86 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	21.55 %
Actinospica robiniae	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Catenulisporales → Actinospicaceae → Actinospica → Actinospica robiniae	5.17 %
unclassified Dietzia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Dietziaceae → Dietzia → unclassified Dietzia	0.86 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	0.86 %
Bradyrhizobium sediminis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium sediminis	0.86 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	21.55 %
Actinospica robiniae	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Catenulisporales → Actinospicaceae → Actinospica → Actinospica robiniae	5.17 %
Dietzia sp. DQ11-71	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Dietziaceae → Dietzia → unclassified Dietzia → Dietzia sp. DQ11-71	0.86 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	0.86 %
Bradyrhizobium sediminis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium sediminis	0.86 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300002245\|JGIcombinedJ26739_100099086	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Catenulisporales → Actinospicaceae → Actinospica → Actinospica robiniae	2727	Open in IMG/M
3300002906\|JGI25614J43888_10093674	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	807	Open in IMG/M
3300005332\|Ga0066388_105781608	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	625	Open in IMG/M
3300005436\|Ga0070713_101231780	Not Available	725	Open in IMG/M
3300005437\|Ga0070710_10273807	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1093	Open in IMG/M
3300005764\|Ga0066903_102792410	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	947	Open in IMG/M
3300005900\|Ga0075272_1011787	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1667	Open in IMG/M
3300006354\|Ga0075021_10939737	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	562	Open in IMG/M
3300006755\|Ga0079222_10195773	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1209	Open in IMG/M
3300006854\|Ga0075425_102493898	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	573	Open in IMG/M
3300010048\|Ga0126373_10581159	Not Available	1171	Open in IMG/M
3300010048\|Ga0126373_13221794	All Organisms → cellular organisms → Bacteria	508	Open in IMG/M
3300010325\|Ga0134064_10353065	Not Available	575	Open in IMG/M
3300010358\|Ga0126370_10353301	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1189	Open in IMG/M
3300010358\|Ga0126370_10856259	All Organisms → cellular organisms → Bacteria	816	Open in IMG/M
3300010361\|Ga0126378_11707424	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	715	Open in IMG/M
3300010366\|Ga0126379_10911998	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	981	Open in IMG/M
3300010366\|Ga0126379_11080093	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	908	Open in IMG/M
3300010366\|Ga0126379_12099855	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	667	Open in IMG/M
3300010373\|Ga0134128_12625608	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	555	Open in IMG/M
3300010398\|Ga0126383_10296546	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1612	Open in IMG/M
3300010398\|Ga0126383_12541839	All Organisms → cellular organisms → Bacteria	596	Open in IMG/M
3300010863\|Ga0124850_1020213	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2130	Open in IMG/M
3300010937\|Ga0137776_1893867	All Organisms → cellular organisms → Bacteria	727	Open in IMG/M
3300012198\|Ga0137364_11044020	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	616	Open in IMG/M
3300012285\|Ga0137370_10500991	All Organisms → cellular organisms → Bacteria	744	Open in IMG/M
3300012948\|Ga0126375_10138238	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1516	Open in IMG/M
3300012971\|Ga0126369_11769735	All Organisms → cellular organisms → Bacteria	707	Open in IMG/M
3300012971\|Ga0126369_13202254	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	536	Open in IMG/M
3300012971\|Ga0126369_13494425	All Organisms → cellular organisms → Bacteria	515	Open in IMG/M
3300013307\|Ga0157372_13371683	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	508	Open in IMG/M
3300016270\|Ga0182036_11555672	All Organisms → cellular organisms → Bacteria	556	Open in IMG/M
3300016341\|Ga0182035_11149596	Not Available	692	Open in IMG/M
3300016357\|Ga0182032_11596775	All Organisms → cellular organisms → Bacteria	567	Open in IMG/M
3300016387\|Ga0182040_11708339	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	537	Open in IMG/M
3300016404\|Ga0182037_10443517	Not Available	1078	Open in IMG/M
3300016445\|Ga0182038_11618801	All Organisms → cellular organisms → Bacteria	583	Open in IMG/M
3300017942\|Ga0187808_10518674	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Dietziaceae → Dietzia → unclassified Dietzia → Dietzia sp. DQ11-71	553	Open in IMG/M
3300020583\|Ga0210401_10555935	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Catenulisporales → Actinospicaceae → Actinospica → Actinospica robiniae	1010	Open in IMG/M
3300021088\|Ga0210404_10434867	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	737	Open in IMG/M
3300021402\|Ga0210385_10508804	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Catenulisporales → Actinospicaceae → Actinospica → Actinospica robiniae	914	Open in IMG/M
3300021479\|Ga0210410_11437136	All Organisms → cellular organisms → Bacteria	583	Open in IMG/M
3300021560\|Ga0126371_11527647	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	795	Open in IMG/M
3300022557\|Ga0212123_10342591	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1026	Open in IMG/M
3300025627\|Ga0208220_1129543	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	657	Open in IMG/M
3300025627\|Ga0208220_1149513	All Organisms → cellular organisms → Bacteria	596	Open in IMG/M
3300025916\|Ga0207663_10125089	Not Available	1767	Open in IMG/M
3300027787\|Ga0209074_10139790	All Organisms → cellular organisms → Bacteria	861	Open in IMG/M
3300027895\|Ga0209624_11001411	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium sediminis	541	Open in IMG/M
3300031543\|Ga0318516_10186875	Not Available	1194	Open in IMG/M
3300031543\|Ga0318516_10246941	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1032	Open in IMG/M
3300031543\|Ga0318516_10389403	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	803	Open in IMG/M
3300031545\|Ga0318541_10706442	All Organisms → cellular organisms → Bacteria	563	Open in IMG/M
3300031572\|Ga0318515_10202704	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Catenulisporales → Actinospicaceae → Actinospica → Actinospica robiniae	1063	Open in IMG/M
3300031573\|Ga0310915_11116106	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	547	Open in IMG/M
3300031573\|Ga0310915_11222715	All Organisms → cellular organisms → Bacteria	519	Open in IMG/M
3300031640\|Ga0318555_10174573	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1155	Open in IMG/M
3300031668\|Ga0318542_10025987	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2472	Open in IMG/M
3300031679\|Ga0318561_10451053	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	708	Open in IMG/M
3300031680\|Ga0318574_10556711	All Organisms → cellular organisms → Bacteria	672	Open in IMG/M
3300031681\|Ga0318572_10278331	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	987	Open in IMG/M
3300031681\|Ga0318572_10602995	All Organisms → cellular organisms → Bacteria	654	Open in IMG/M
3300031718\|Ga0307474_10755320	Not Available	769	Open in IMG/M
3300031719\|Ga0306917_10408110	Not Available	1061	Open in IMG/M
3300031723\|Ga0318493_10804863	All Organisms → cellular organisms → Bacteria	529	Open in IMG/M
3300031724\|Ga0318500_10196142	Not Available	966	Open in IMG/M
3300031736\|Ga0318501_10706030	All Organisms → cellular organisms → Bacteria	556	Open in IMG/M
3300031744\|Ga0306918_10316667	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Catenulisporales → Actinospicaceae → Actinospica → Actinospica robiniae	1205	Open in IMG/M
3300031747\|Ga0318502_10034937	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2569	Open in IMG/M
3300031747\|Ga0318502_10107468	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1553	Open in IMG/M
3300031764\|Ga0318535_10299113	All Organisms → cellular organisms → Bacteria	720	Open in IMG/M
3300031764\|Ga0318535_10367424	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	643	Open in IMG/M
3300031768\|Ga0318509_10057094	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2009	Open in IMG/M
3300031768\|Ga0318509_10844656	All Organisms → cellular organisms → Bacteria	506	Open in IMG/M
3300031771\|Ga0318546_10854326	All Organisms → cellular organisms → Bacteria	640	Open in IMG/M
3300031778\|Ga0318498_10097979	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1328	Open in IMG/M
3300031778\|Ga0318498_10105675	Not Available	1277	Open in IMG/M
3300031782\|Ga0318552_10539587	All Organisms → cellular organisms → Bacteria	595	Open in IMG/M
3300031793\|Ga0318548_10666689	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	505	Open in IMG/M
3300031795\|Ga0318557_10094917	Not Available	1314	Open in IMG/M
3300031797\|Ga0318550_10572100	All Organisms → cellular organisms → Bacteria	543	Open in IMG/M
3300031798\|Ga0318523_10202665	Not Available	991	Open in IMG/M
3300031799\|Ga0318565_10612224	All Organisms → cellular organisms → Bacteria	523	Open in IMG/M
3300031821\|Ga0318567_10620752	All Organisms → cellular organisms → Bacteria	614	Open in IMG/M
3300031859\|Ga0318527_10115374	Not Available	1111	Open in IMG/M
3300031879\|Ga0306919_11085793	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	610	Open in IMG/M
3300031879\|Ga0306919_11318505	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	546	Open in IMG/M
3300031896\|Ga0318551_10051629	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	2075	Open in IMG/M
3300031896\|Ga0318551_10262508	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	966	Open in IMG/M
3300031896\|Ga0318551_10706017	All Organisms → cellular organisms → Bacteria	584	Open in IMG/M
3300031896\|Ga0318551_10722952	All Organisms → cellular organisms → Bacteria	577	Open in IMG/M
3300031897\|Ga0318520_10895902	All Organisms → cellular organisms → Bacteria	558	Open in IMG/M
3300031910\|Ga0306923_11133806	Not Available	840	Open in IMG/M
3300031912\|Ga0306921_11128793	Not Available	877	Open in IMG/M
3300031912\|Ga0306921_11294709	Not Available	807	Open in IMG/M
3300031942\|Ga0310916_11393558	All Organisms → cellular organisms → Bacteria	574	Open in IMG/M
3300031954\|Ga0306926_12915581	All Organisms → cellular organisms → Bacteria	513	Open in IMG/M
3300032001\|Ga0306922_12287280	All Organisms → cellular organisms → Bacteria	519	Open in IMG/M
3300032010\|Ga0318569_10037272	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Catenulisporales → Actinospicaceae → Actinospica → Actinospica robiniae	2055	Open in IMG/M
3300032010\|Ga0318569_10294679	Not Available	755	Open in IMG/M
3300032035\|Ga0310911_10688110	All Organisms → cellular organisms → Bacteria	592	Open in IMG/M
3300032043\|Ga0318556_10569185	Not Available	591	Open in IMG/M
3300032043\|Ga0318556_10610200	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	569	Open in IMG/M
3300032044\|Ga0318558_10580076	All Organisms → cellular organisms → Bacteria	560	Open in IMG/M
3300032052\|Ga0318506_10525898	Not Available	524	Open in IMG/M
3300032064\|Ga0318510_10164498	Not Available	882	Open in IMG/M
3300032064\|Ga0318510_10467718	All Organisms → cellular organisms → Bacteria	543	Open in IMG/M
3300032066\|Ga0318514_10212023	All Organisms → cellular organisms → Bacteria	1015	Open in IMG/M
3300032067\|Ga0318524_10181149	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1074	Open in IMG/M
3300032067\|Ga0318524_10756572	All Organisms → cellular organisms → Bacteria	513	Open in IMG/M
3300032068\|Ga0318553_10120284	Not Available	1349	Open in IMG/M
3300032068\|Ga0318553_10194665	Not Available	1056	Open in IMG/M
3300032068\|Ga0318553_10676774	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	540	Open in IMG/M
3300032205\|Ga0307472_102217215	All Organisms → cellular organisms → Bacteria	554	Open in IMG/M
3300032261\|Ga0306920_101420625	Not Available	994	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	98.28%
Host-Associated	Host-Associated	1.72%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	94.83%
Aquatic	Environmental → Aquatic	3.45%
Plants	Host-Associated → Plants	1.72%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	94.83%
Thermal Springs	Environmental → Aquatic → Thermal Springs	1.72%
Rhizosphere	Host-Associated → Plants → Rhizosphere	1.72%
Freshwater	Environmental → Aquatic → Freshwater	0.86%
Sediment	Environmental → Aquatic → Sediment	0.86%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	87.07%
Loam	Environmental → Terrestrial → Soil → Loam	6.90%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	1.72%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	1.72%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	0.86%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.86%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	0.86%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	65.52%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	17.24%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	4.31%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	2.59%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.72%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	1.72%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	1.72%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	0.86%
Sediment	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Sediment	0.86%
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	0.86%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.86%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	0.86%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.86%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	50.00%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	13.79%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	12.93%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	2.59%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.59%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	1.72%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	1.72%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	1.72%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.72%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	1.72%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	0.86%
Sediment	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Sediment → Sediment	0.86%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	0.86%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.86%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.86%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	0.86%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.86%
Rice Paddy Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Rice Paddy Soil	0.86%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.86%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.86%
Boreal Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil	0.86%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300002906	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_60cm	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005437	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005900	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_5C_0N_404	Environmental	Open in IMG/M
3300006354	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2012	Environmental	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010325	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_2_0_1 metaG	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300010863	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (PacBio error correction)	Environmental	Open in IMG/M
3300010880	Boreal forest soil eukaryotic communities from Alaska, USA - C5-1 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300010937	Fumarole sediment microbial communities, Furnas, Sao Miguel, Azores. Combined Assembly of Gp0156138, Gp0156139	Environmental	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012285	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_20_16 metaG	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300013307	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG	Host-Associated	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300017942	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_3	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021088	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-M	Environmental	Open in IMG/M
3300021402	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-O	Environmental	Open in IMG/M
3300021479	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300022557	Paint Pots_combined assembly	Environmental	Open in IMG/M
3300025627	Arctic peat soil from Barrow, Alaska - NGEE Surface sample F53-1 deep-092012 (SPAdes)	Environmental	Open in IMG/M
3300025916	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300027787	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter (SPAdes)	Environmental	Open in IMG/M
3300027895	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O1 (SPAdes)	Environmental	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031572	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f19	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031640	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f23	Environmental	Open in IMG/M
3300031668	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f23	Environmental	Open in IMG/M
3300031679	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f23	Environmental	Open in IMG/M
3300031680	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f22	Environmental	Open in IMG/M
3300031681	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f20	Environmental	Open in IMG/M
3300031718	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031723	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f23	Environmental	Open in IMG/M
3300031724	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f20	Environmental	Open in IMG/M
3300031736	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f21	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031747	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f22	Environmental	Open in IMG/M
3300031764	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f27	Environmental	Open in IMG/M
3300031768	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f22	Environmental	Open in IMG/M
3300031771	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19	Environmental	Open in IMG/M
3300031778	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f24	Environmental	Open in IMG/M
3300031782	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f20	Environmental	Open in IMG/M
3300031793	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f21	Environmental	Open in IMG/M
3300031795	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f19	Environmental	Open in IMG/M
3300031797	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f23	Environmental	Open in IMG/M
3300031798	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f19	Environmental	Open in IMG/M
3300031799	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f21	Environmental	Open in IMG/M
3300031821	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f20	Environmental	Open in IMG/M
3300031859	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f25	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031896	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f19	Environmental	Open in IMG/M
3300031897	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f16	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032010	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f22	Environmental	Open in IMG/M
3300032035	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF170	Environmental	Open in IMG/M
3300032043	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f24	Environmental	Open in IMG/M
3300032044	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f20	Environmental	Open in IMG/M
3300032052	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f19	Environmental	Open in IMG/M
3300032064	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f17	Environmental	Open in IMG/M
3300032066	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f18	Environmental	Open in IMG/M
3300032067	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f22	Environmental	Open in IMG/M
3300032068	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f21	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGIcombinedJ26739_1000990864	3300002245	Forest Soil	VNLAAFTGTPVTVPLNADPVAIAAAAGGLLLLAGVALTIETRLARGRGAIQALRVGE*
JGI25614J43888_100936741	3300002906	Grasslands Soil	PAINVAAFTGLAVTVPLHADPVALAAAATGLLVLALLTTAVQNGLARRRGEGRILRVGD*
Ga0066388_1057816082	3300005332	Tropical Forest Soil	GAACALALVPLVGPSVNLAAFTGTPVVVPLHANLVTIAAIAAGLVALSWVTLTVQNRLARGRGTTQALRVGE*
Ga0070713_1012317801	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	ALVPLVGPSVNLAAFTGTPVVVPLQANLAAIVAIAAGLVALAWVTLAVQSRLARGRGTTQALRVGE*
Ga0070710_102738071	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	PVTVPLRAEPLAIVAAAAGLLLLAALTLTIQNGLARSRGTAQALRVGQ*
Ga0066903_1027924101	3300005764	Tropical Forest Soil	ALALVPLVGPAVDLAAFTGMPVSVPLHANLVAIVATAAGLVLLAWLTLAVQHRLARGRGTAQALRVGE*
Ga0075272_10117871	3300005900	Rice Paddy Soil	LDLAAFTGTPVRVPLHASPLALALTFAGLCVLTALALGVQDRIARHRGTTQALRVGE*
Ga0075021_109397371	3300006354	Watersheds	CALALVPLVGPAVDLAAFTGMPVTVPLHANLVAIVATAAGLVLLAWLTLAVQHRLARGRGTAQALRVGE*
Ga0079222_101957732	3300006755	Agricultural Soil	SVNLAAFTGTPVVVPLHANVMAIAAIAAGLIVLAWVTLAVQSRLARGRGTTQALRVGE*
Ga0075425_1024938981	3300006854	Populus Rhizosphere	PLVGPSVNLAAFTGTPVVVPLQANLMAIAAIAAGLIVLAWVALAVQSRLARGRGATQALRVGE*
Ga0126373_105811592	3300010048	Tropical Forest Soil	EPAINLAAFTGLPVTVPLHANLAAIAATAAGLLFLAGLTLTLQDRLARRRGTAQALRAGE
Ga0126373_132217942	3300010048	Tropical Forest Soil	PLHANLMAIAVTAAGLIVLAWVTLAVQSRLARGRGTTQALRVGE*
Ga0134064_103530652	3300010325	Grasslands Soil	VVPLHANLMAIAATAAGLIVLAWVTLAVQSRLARSRGTTQALRVGE*
Ga0126370_103533012	3300010358	Tropical Forest Soil	ALVPLVGPSVNLAAFTGTPVAVPLRANLAAIAAIAAGLVVLAWVTLAVQDRMARGRGTSRALRVGE*
Ga0126370_108562592	3300010358	Tropical Forest Soil	SAVDLAAFTGMPVTVPLRAEPLAIVAAAAGLLLLAALTLTIQNGLARSRGTAQALRVGQ*
Ga0126378_117074242	3300010361	Tropical Forest Soil	ALVPLVGPAIDLAAFTGMPVTAPLHADTLAILIAIGGLLLVAALTLTIQNRVARGHGAAQALRAGP*
Ga0126379_109119981	3300010366	Tropical Forest Soil	CALALVPLVGPAVDLAAFTGMPVTVPLHANLAAIVATAGGLVLLAWLTLAVQYRLARGRGTAQALRVGE*
Ga0126379_110800932	3300010366	Tropical Forest Soil	ALALVPLVGPSVNLAAFTGTPVAVPLHANLAAIAAITAGLVVLAWVTLAVQDRMARGRGTSRALRVGE*
Ga0126379_120998552	3300010366	Tropical Forest Soil	ACALALVPLVGPSVNLAAFTGTPVVVPLHANLTAIAATAAGLIVLAWVTLAVQSRLARDHGTTQALRVGE*
Ga0134128_126256082	3300010373	Terrestrial Soil	ALVPLVGPAVDLAAFTGLPVTVPLRADPAAIGAAVAGLLLLAALTLTIQSRLARGRRTTQALRVGE*
Ga0126383_102965463	3300010398	Tropical Forest Soil	PVTVPLRAEPLAIVAAAAGLLLLAALTLAIQNGLARSRGTAQALRVGQ*
Ga0126383_125418392	3300010398	Tropical Forest Soil	FTGTPVVVPLHANLMAIAATAAGLIVLAWVTLAVQTRLARGRGTTQALRVGE*
Ga0124850_10202132	3300010863	Tropical Forest Soil	VPLVGPSVNLAAFTGTPVVVPLHANVMAIAAIAAGLIVLAWVTLAVQSRLARGRGTTQALRVGE*
Ga0126350_102387381	3300010880	Boreal Forest Soil	GAPVAVPLRAQPLAIVAAAAGLLALGLLTLTVQNRLARSRGAAQALRVGQ*
Ga0137776_18938671	3300010937	Sediment	ALVPLVGSAIDLSAFTGTPVSVPLRAEPLALVAVAAGLLLLAALTLGVENRLARSRGAAQALRVGE*
Ga0137364_110440202	3300012198	Vadose Zone Soil	AACALALVPLVGPSVNLAAFTGTPVVVPLHANVMAIAAIAAGLIVLAWVTLAVQSRLARGRGTTQALRVGE*
Ga0137370_105009911	3300012285	Vadose Zone Soil	FTGTPVVVPLHANLMAIAATAAGLIVLAWVTLAVQSRLARGRGTTQALRVGE*
Ga0126375_101382383	3300012948	Tropical Forest Soil	LHANVTAIAAIAAGLIVLAWVTLAVQSRLARGRGTTQALRVGE*
Ga0126369_117697351	3300012971	Tropical Forest Soil	PSVNLAAFTGTPVAVPLRANLAAIAAIAAGLVVLAWVTLAVQDRMARGRGTSRALRVGE*
Ga0126369_132022542	3300012971	Tropical Forest Soil	LALVPLVGPAIDLAAFTGLPVTAPLHADALAILIAVGGLLLVAALTLTIQNRLARGHGAAQALRAGP*
Ga0126369_134944252	3300012971	Tropical Forest Soil	VDLAAFTGMPVNVALHANLVAIVATAAGLVLLAWLTLAVQHRLARGRGTAQALRVGE*
Ga0157372_133716831	3300013307	Corn Rhizosphere	ACALALVPLVGPAVDLAAFTGLPVTVPLRADPAAIGAAVAGLLLLAALTLTIQSRLARGRRTTQALRVGE*
Ga0182036_115556721	3300016270	Soil	ILAATVGGVVCALALVPLVGPSVHLAAFTGTPVVVPLHANLMAIAATAAGLIVLAWVILAVQSRLARGRGTTQALRVGE
Ga0182035_111495962	3300016341	Soil	VNLAAFTGVPVTVPLHANLVAILATAAGLVLLAWLALIVQGRLAHGRGTTQALRVGE
Ga0182032_115967751	3300016357	Soil	ITAVEILPLILAAAVGGIVCALALVPLVGSAVNLAAFTGLPVTVPLQAQPLAILAATAGLLLLAALTLIIQNRLAHSRGTAQALRVGQ
Ga0182040_117083392	3300016387	Soil	LVPLVGPSVNLAAFTGTPVVVPLHASLMAIAITAAGLIVLAWVTLAVQSRLARGRGTTQALRVGE
Ga0182037_104435172	3300016404	Soil	VVVPLHANLMAIAATAAGLIVLAWVTLAVQSRLARSRGTTQALRVGE
Ga0182038_116188011	3300016445	Soil	AAFTGVPVTVPLHANLVAILATAAGLVLLAWLALIVQGRLAHGRGTTQALRVGE
Ga0187808_105186741	3300017942	Freshwater Sediment	GTVCALALVPLVGSAVNLAAFTGTPVTVPLRAQPLAIVAAAAGLLLLAALTLTIQNGLARTRGTAQALRVGQ
Ga0210401_105559351	3300020583	Soil	VPLVGPAVDLAAFTGVPVNTALQADPAAIGVAAAALLVLAGLTLAIQDRLARGRGTTQALRVGE
Ga0210404_104348672	3300021088	Soil	LVGPAVNLAAFTGMPVTVPLHANLVAIAVTAAGLVLLAWLTLAVQYRLARSRGTAQALRVGE
Ga0210385_105088042	3300021402	Soil	LVPLVGPAVDLAAFTGVPVNTALQADPAAIGVAAAALLVLAGLTLAIQDRLARGRGTTQALRVGE
Ga0210410_114371361	3300021479	Soil	AAFTGMPVSAPLHANAPAILVAVGGLLLVAALTLTIQNRLARGRGAAQALRAGP
Ga0126371_115276472	3300021560	Tropical Forest Soil	AAAVGGAVCALVLVPLVGPAVDLAAFTGMPVSVPLHADLITIVVTAAGLMLLAGLTLAIQDRLARSRGTAQALRVGE
Ga0212123_103425912	3300022557	Iron-Sulfur Acid Spring	LVPLVGPALNLAAFTGMPVTVPLHADPVAIAAAAAGLLLLAGLTLTVQNRLARSRGTTQALRVGE
Ga0208220_11295431	3300025627	Arctic Peat Soil	PPPWGGTVCALVLVPLVGPAVDLAAFTGVPVTAALQADPAAIGVAAGALLLLAGLTLAIQDRLARGRGTTQALRVGE
Ga0208220_11495132	3300025627	Arctic Peat Soil	GPAVDLAAFTGVPVNTALQADPAAIGVAAAALLLLAGLTLAIQDRLARGRGTTQALRVGE
Ga0207663_101250891	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	AAFTGLPVTVPLRADPAAIGAAVAGLLLLAALTLTIQSRLARGRRTTQALRVGE
Ga0209074_101397902	3300027787	Agricultural Soil	VNLAAFTGTPVVVPLHANVMAIAAIAAGLIVLAWVTLAVQSRLARGRGTTQALRVGE
Ga0209624_110014112	3300027895	Forest Soil	AGPAVNLAAFTGTPVTVPLRADPVAIVAAAVALLLLGGLTLTISSRLARSRGPAQALRLGETASG
Ga0318516_101868751	3300031543	Soil	VVGGTVCALALVPLVGSAVNLAAFTGVPVTVPLRAEPLAIVAAAAGLLLLAALTLTIQNGLARSRGTAQALRVGQ
Ga0318516_102469411	3300031543	Soil	LAAFTGTPVVVPLHANLVTILAIVAALVVLAWVTLAVQSRLARGRGTTQALRVGE
Ga0318516_103894031	3300031543	Soil	GGVVCALALVPLVGPSVNLAAFTGTPVVVPLHANLMAIAATAAGLIVLAWVILAVQSRLARGRGTTQALRVGE
Ga0318541_107064421	3300031545	Soil	AVNLAAFTGVPVTVPLHANLVAILATAAGLVLLAWLALIVQGRLAHGRGTTQALRVGE
Ga0318515_102027041	3300031572	Soil	AVVPLVGPAINLAAFTGTPVTVPLRAQPLAILVAAIGLLLLAALTLTIQNRLARSRGTAQALRVGQ
Ga0310915_111161062	3300031573	Soil	LALVPLVGPSVDVAAFTGTPVVVPLQVNVMAIVATAAGLIVLAWVALAVQSRLARGRGTTQALRVGE
Ga0310915_112227152	3300031573	Soil	NLAAFTGTPVVVPLHPSLMAIAITAAGLIVLAWVTLAVQSRLARGRGTTQALRVGE
Ga0318555_101745731	3300031640	Soil	VETLPAILAAAVGGAACALALVPLVGPSVNLAAFTGTPVVVPLHANLVTILAIVAALVVLAWVTLAVQSRLARGRGTTQALRVGE
Ga0318542_100259874	3300031668	Soil	TRFACSGTPVVVPLHANLVAIAVTAAGLILLAWLTLVVQSRLARTRGTTQALRVGE
Ga0318561_104510531	3300031679	Soil	GGAVCALALVPLVGPAVDLAAFTGMPVSVPLHANLVAIVATAAGLVLLAWLTLAVQYRLARSRGTAQALRVGE
Ga0318574_105567112	3300031680	Soil	TPVVVPLHANLMAIAVTAAGLIVLAWVTLAVQSRLARGRGTTQALRVGE
Ga0318572_102783312	3300031681	Soil	LALVPLVGPAVDLAAFTGMPVSVPLHANLVAIVATAAGLVLLAWLTLAVQYRLARSRGTAQALRVGE
Ga0318572_106029952	3300031681	Soil	TPVVVPLHANLVTIAAIAAGLVVLAWVTLTVQNRLARGRGTTQALRVGE
Ga0307474_107553201	3300031718	Hardwood Forest Soil	VAVGGTVCALALVPLVGSAIDLAAFTGLPVTAPLHADAPAILIAIGGLLLVAALTLTIQNRLARGRGAAQALRAGP
Ga0306917_104081102	3300031719	Soil	ASLMAIAITAAGLIVLAWVTLAVQSRLARGRGTTQALRVGE
Ga0318493_108048631	3300031723	Soil	TGTPVVVPLHASLMAIAITAAGLIVLAWVTLAVQSRLARGRGTTQALRVGE
Ga0318500_101961421	3300031724	Soil	QVNVMAIVTTAAGLIVLAWVALAVQSRLARSRGTTQALRVGE
Ga0318501_107060301	3300031736	Soil	VGPSVNLAAFTGTPVVVPLHANLMAIAVTAAGLIVLAWVTLAVQSRLARGRGTTQALRVG
Ga0306918_103166672	3300031744	Soil	PLVGPAVNLAAFTGVPVTVPLHANLVAILATAAGLVLLAWLALIVQGRLAHGRGTTQALRVGE
Ga0318502_100349371	3300031747	Soil	PAVDLAAFTGMPVSVPLHANLVAIVATAAGLVLLAWLTLAVQYRLARSRGTAQALRVGE
Ga0318502_101074683	3300031747	Soil	PSVNLAAFTGTPVVVPLHANLVTILAIVAALVVLAWVTLAVQSRLARGRGTTQALRVGE
Ga0318535_102991131	3300031764	Soil	VPLVGPAVNLAAFTGTPVVVPLHANVMAIVATAAGLIVLAWVVLAVQSRLARGRGTTQALRVGE
Ga0318535_103674241	3300031764	Soil	LALVPLVGPSVNLAAFTGTPVVVPLHASLMAIAITAAGLIVLAWVTLAVQSRLARGRGTTQALRVGE
Ga0318509_100570943	3300031768	Soil	FTGTPVAVPLHASLMAIAITAAGLIVLAWVTLAVQSRLARGRGTTQALRVGE
Ga0318509_108446562	3300031768	Soil	AINLAAFTGTPVTVPLRAQPLAILVAAIGLLLLAALTLTIQNRLARSRGTAQALRVGQ
Ga0318546_108543261	3300031771	Soil	AAFTGTPVVVPLHASLMAIAITAAGLIVLAWVTLAVQSRLARGRGTTQALRVGE
Ga0318498_100979791	3300031778	Soil	VGGAVCALALVPLVGPAVDLAAFTGMPVSVPLHANLVAIVATAAGLVLLAWLTLAVQYRLARSRGTAQALRVGQ
Ga0318498_101056751	3300031778	Soil	FTGTPVAVPLRASLMAIAITAAGLIVLAWVTLAVQSRLARGRGTTQALRVGE
Ga0318552_105395871	3300031782	Soil	PLQVNVMAIVTTAAGLIVLAWVALAVQSRLARSRGTTQALRVGE
Ga0318548_106666891	3300031793	Soil	VGGAVCALALVPLVGPAVNLAAFTGTPVVVPLHANVMAIVATAAGLIVLAWVVLAVQSRLARGRGTTQALRVGE
Ga0318557_100949172	3300031795	Soil	VNLAAFTGTPVVVPLHASLMAIAITAAGLIVLAWVTLAVQSRLARGRGTTQALRVGE
Ga0318550_105721002	3300031797	Soil	LAAFTGTPVVVPLHANLMAIAATAAGLIVLAWVILAVQSRLARGRGTTQALRVGE
Ga0318523_102026651	3300031798	Soil	TGTPVVVPLHANVMAIVAIAAGLIVLAWVALAVPSRLARGRGTTQALRVGE
Ga0318565_106122241	3300031799	Soil	GGTVCALALVPLVGSAVNLAAFTGVPVTVPLRAEPLAIVAAAAGLLLLAALTLTIQNGLARSRGTAQALRVGQ
Ga0318567_106207521	3300031821	Soil	PLVGPSVNLAAFTGTPVVVPLHANLVTILAIVAALVVLAWVTLAVQSRLARGRGTTQALRVGE
Ga0318527_101153741	3300031859	Soil	NLAAFTGTPVVVPLHASLMAIAITAAGLIVLAWVTLAVQSRLARGRGTTQALRVGE
Ga0306919_110857931	3300031879	Soil	LVGPSVNLAAFTGTPVVVPLHANLMAIAVTAAGLIVLAWVTLAVQSRLARGRGTTQALRVGE
Ga0306919_113185051	3300031879	Soil	LVPLVGPSVNLAAFTGTPVVVPLHANLMAIAATAAGLIVLAWVILAVQSRLARGRGTTQALRVGE
Ga0318551_100516291	3300031896	Soil	GSTVNLAAFTGTPVAVPLRAQPLAIAAAAVGLLLLAALTLIIQNGLARSRGTAQALRVGQ
Ga0318551_102625081	3300031896	Soil	TVGGAACALALVPLVGPAVDLAAFTGTPVVVPLHANLVAIAVTAAGLILLAWLTLVVQSRLARTRGTTQALRVGE
Ga0318551_107060172	3300031896	Soil	FACNGTTTGTPVVVPLHANLVAIAATAAGLIALAWVTLAVQSRLARGRRTTQALRVGE
Ga0318551_107229522	3300031896	Soil	VNLAAFTGTPVVVPLHANLMAIAVTAAGLIVLAWVTLAVQSRLARGRGTTQALRVGE
Ga0318520_108959021	3300031897	Soil	MAIAITAAGLIVLAWVTLAVQSRLARGRGTTQALRVGE
Ga0306923_111338061	3300031910	Soil	GPAVDLAAFTGMPVSVPLHANLVAIVATAAGLVLLAWLTLAVQYRLARSRGTAQALRVGE
Ga0306921_111287931	3300031912	Soil	ALVPLVGPSVNLAAFTGTPVVVPLHANLVTILAIVAALVVLAWVTLAVQSRLARGRGTTQALRVGE
Ga0306921_112947091	3300031912	Soil	GTVCALALVPLVGSAVNLAAFTGTPVTVPLQAQPLAIVAAAVGLLLLAALTVTIQNGLARSRGTAQALRVGQ
Ga0310916_113935582	3300031942	Soil	PLHANLMAIAATAAGLIVLAWVILAVQSRLARGRGTTQALRVGE
Ga0306926_129155812	3300031954	Soil	FTGTPVTVPLRAQPLAIALAAAGLLVLAALTLTIQNRLARSRGTAQALRVGQ
Ga0306922_122872802	3300032001	Soil	VNLAAFSGTPVTVPLRAEPLAIVAAAAGLLLLAALTLTIQNGLARSRGTAQALRVGQ
Ga0318569_100372723	3300032010	Soil	GGAACALALVPLVGPAVDLAAFTGTPVVVPLHANLVAIAVTAAGLILLAWLTLVVQSRLARTRGTTQALRVGE
Ga0318569_102946791	3300032010	Soil	TGTPVTVPLRAQPLAIALAAAGLLVLAALTLTIQNRLARSRGTAQALRVGQ
Ga0310911_106881101	3300032035	Soil	NVMAIVATAAGLIVLAWVALAVQSRLARGRGTTQALRVGE
Ga0318556_105691852	3300032043	Soil	ADGRGEAACALALVPLVGPSVNLAAFTGTPVVVPLHANVLAIVATAAGLIVLAWVTLAVQSRLARGRGTTQALRVGE
Ga0318556_106102002	3300032043	Soil	AATVGGAACALALVPLVGPSVNLAAFTGTPVVVPLHASLMAIAITAAGLIVLAWVTLAVQSRLARGRGTTQALRVGE
Ga0318558_105800762	3300032044	Soil	ALVPLVGSAVDLAAFTGTPVTVPLRAQPLAIALAAAGLLVLAALTLTIQNRLARSRGTAQALRVGQ
Ga0318506_105258982	3300032052	Soil	ACALALVPLVGPSVDLAAFTGTPVVVPLHANLVTIAAIAAGLVVLAWVTLTVQNRLARGRGTTQALRVGE
Ga0318510_101644982	3300032064	Soil	AFTGTPVTVPLRAQPLAIGVAAIGLLLLAALTLTIQNRLARSRGTAQALRVGQ
Ga0318510_104677182	3300032064	Soil	HANLVTILAIVAALVVLAWVTLAVQSRLARGRGTTQALRVGE
Ga0318514_102120231	3300032066	Soil	TPVVVPLHASLMAIAITAAGLIVLAWVTLAVQSRLARGRGTTQALRVGE
Ga0318524_101811491	3300032067	Soil	AAVGGAACAFALVPLVGPAVNLAAFTGVPVTVPLHANLVAILATAAGLVLLAWLALIVQGRLAHGRGTTQALRVGE
Ga0318524_107565722	3300032067	Soil	LAAFTGTPVVVPLHANLVAIAATAAGLIALAWVTLAVQSRLARGRRTTQALRVGE
Ga0318553_101202841	3300032068	Soil	VTGVPVTVPLHANLVAILATAAGLVLLAWLALIVQGRLAHGRGTTQALRVGE
Ga0318553_101946651	3300032068	Soil	SVNLAAFTGTPVAVPLHASLMAIAITAAGLIVLAWVTLAVQSRLARGRGTTQALRVGE
Ga0318553_106767741	3300032068	Soil	AVGGAVCALALVPLVGPSVNLAAFTGTPVVVPLHANLVAIAATAAGLIALAWVTLAVQSRLARGRRTTQALRVGE
Ga0307472_1022172151	3300032205	Hardwood Forest Soil	TGTPVVVPLHANLAAIAATAAGLIVLAWVTLAVQSRLARGRGTTRALRVGE
Ga0306920_1014206252	3300032261	Soil	VGGTVCALALVPLMGSTVNLAAFTGTPVAVPLRAQPLAIAAAAAGLLLLAALTLIIQNGLARSRGTAQALRVGQ

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F078795

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences