Metagenome / Metatranscriptome Family F078689

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F078689
Family Type	Metagenome / Metatranscriptome
Number of Sequences	116
Average Sequence Length	71 residues
Representative Sequence	TTAIVVVQTIIGLLGFWVAGAAVKSIIKGSTMRHALVAIWSMLIHGEIRGQGEVGNDPNEGRPPREDA
Number of Associated Samples	98
Number of Associated Scaffolds	116

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	1.72 %
% of genes near scaffold ends (potentially truncated)	93.97 %
% of genes from short scaffolds (< 2000 bps)	85.34 %
Associated GOLD sequencing projects	94
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.33

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (58.621 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (47.414 % of family members)
Environment Ontology (ENVO)	Unclassified (45.690 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (43.966 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 47.92% β-sheet: 0.00% Coil/Unstructured: 52.08%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.33
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.33
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 116 Family Scaffolds
PF04960	Glutaminase	7.76
PF07885	Ion_trans_2	6.03
PF01019	G_glu_transpept	4.31
PF00106	adh_short	3.45
PF13551	HTH_29	1.72
PF01047	MarR	1.72
PF11258	DUF3048	1.72
PF09594	GT87	0.86
PF08044	DUF1707	0.86
PF02322	Cyt_bd_oxida_II	0.86
PF13302	Acetyltransf_3	0.86
PF01145	Band_7	0.86
PF13384	HTH_23	0.86
PF01979	Amidohydro_1	0.86
PF13538	UvrD_C_2	0.86
PF02517	Rce1-like	0.86
PF13472	Lipase_GDSL_2	0.86
PF04542	Sigma70_r2	0.86

COG ID	Name	Functional Category	% Frequency in 116 Family Scaffolds
COG2066	Glutaminase	Amino acid transport and metabolism [E]	7.76
COG0405	Gamma-glutamyltranspeptidase	Amino acid transport and metabolism [E]	4.31
COG0568	DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32)	Transcription [K]	0.86
COG1191	DNA-directed RNA polymerase specialized sigma subunit	Transcription [K]	0.86
COG1266	Membrane protease YdiL, CAAX protease family	Posttranslational modification, protein turnover, chaperones [O]	0.86
COG1294	Cytochrome bd-type quinol oxidase, subunit 2	Energy production and conversion [C]	0.86
COG1595	DNA-directed RNA polymerase specialized sigma subunit, sigma24 family	Transcription [K]	0.86
COG4449	Predicted protease, Abi (CAAX) family	General function prediction only [R]	0.86
COG4941	Predicted RNA polymerase sigma factor, contains C-terminal TPR domain	Transcription [K]	0.86

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.62 %
All Organisms	root	All Organisms	40.52 %
Mycobacterium ulcerans	species	Mycobacterium ulcerans	0.86 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.62 %
cellular organisms	root	All Organisms → cellular organisms	40.52 %
Mycobacterium ulcerans	species	Mycobacterium ulcerans	0.86 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.62 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	40.52 %
Mycobacterium ulcerans	species	Mycobacterium ulcerans	0.86 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.62 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	38.79 %
Mycobacterium ulcerans	species	Mycobacterium ulcerans	0.86 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.62 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	37.07 %
Mycobacterium ulcerans	species	Mycobacterium ulcerans	0.86 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.62 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	25.86 %
Acidimicrobiia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia	1.72 %
Mycobacterium ulcerans	species	Mycobacterium ulcerans	0.86 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.62 %
Corynebacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales	5.17 %
Propionibacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales	4.31 %
unclassified Acidimicrobiia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → unclassified Acidimicrobiia	1.72 %
Geodermatophilales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales	0.86 %
Frankiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales	0.86 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	0.86 %
Micrococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	0.86 %
Micromonosporales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales	0.86 %
Mycobacterium ulcerans	species	Mycobacterium ulcerans	0.86 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.62 %
Propionibacteriaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Propionibacteriaceae	4.31 %
Nocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae	4.31 %
Acidimicrobiia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → unclassified Acidimicrobiia → Acidimicrobiia bacterium	1.72 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.86 %
Geodermatophilaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae	0.86 %
Micrococcaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae	0.86 %
Mycobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae	0.86 %
Micromonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	0.86 %
Frankiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae	0.86 %
Mycobacterium ulcerans	species	Mycobacterium ulcerans	0.86 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.62 %
Rhodococcus	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae → Rhodococcus	4.31 %
Microlunatus	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Propionibacteriaceae → Microlunatus	2.59 %
Acidimicrobiia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → unclassified Acidimicrobiia → Acidimicrobiia bacterium	1.72 %
Arthrobacter	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae → Arthrobacter	0.86 %
Mycobacterium	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium	0.86 %
Frankia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia	0.86 %
Tessaracoccus	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Propionibacteriaceae → Tessaracoccus	0.86 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.86 %
Geodermatophilaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae	0.86 %
Micromonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	0.86 %
Mycobacterium ulcerans	species	Mycobacterium ulcerans	0.86 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.62 %
Rhodococcus opacus	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae → Rhodococcus → Rhodococcus opacus	4.31 %
Microlunatus phosphovorus	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Propionibacteriaceae → Microlunatus → Microlunatus phosphovorus	1.72 %
Acidimicrobiia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → unclassified Acidimicrobiia → Acidimicrobiia bacterium	1.72 %
unclassified Arthrobacter	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae → Arthrobacter → unclassified Arthrobacter	0.86 %
Tessaracoccus flavus	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Propionibacteriaceae → Tessaracoccus → Tessaracoccus flavus	0.86 %
unclassified Frankia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia → unclassified Frankia	0.86 %
Mycobacterium	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium	0.86 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.86 %
Geodermatophilaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae	0.86 %
Micromonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	0.86 %
Mycobacterium ulcerans	species	Mycobacterium ulcerans	0.86 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.62 %
Rhodococcus opacus	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae → Rhodococcus → Rhodococcus opacus	4.31 %
Microlunatus phosphovorus NM-1	strain	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Propionibacteriaceae → Microlunatus → Microlunatus phosphovorus → Microlunatus phosphovorus NM-1	1.72 %
Acidimicrobiia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → unclassified Acidimicrobiia → Acidimicrobiia bacterium	1.72 %
Frankia sp. Ea1.12	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia → unclassified Frankia → Frankia sp. Ea1.12	0.86 %
Arthrobacter sp. 49Tsu3.1M3	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae → Arthrobacter → unclassified Arthrobacter → Arthrobacter sp. 49Tsu3.1M3	0.86 %
Tessaracoccus flavus	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Propionibacteriaceae → Tessaracoccus → Tessaracoccus flavus	0.86 %
Mycobacterium	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium	0.86 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.86 %
Geodermatophilaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae	0.86 %
Micromonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	0.86 %
Mycobacterium ulcerans	species	Mycobacterium ulcerans	0.86 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000559\|F14TC_100246991	Not Available	534	Open in IMG/M
3300002568\|C688J35102_120965150	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	3411	Open in IMG/M
3300005093\|Ga0062594_100763790	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	886	Open in IMG/M
3300005339\|Ga0070660_100981006	Not Available	714	Open in IMG/M
3300005347\|Ga0070668_100548929	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1005	Open in IMG/M
3300005356\|Ga0070674_101651963	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	578	Open in IMG/M
3300005356\|Ga0070674_101971393	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	531	Open in IMG/M
3300005563\|Ga0068855_102477422	Not Available	517	Open in IMG/M
3300005719\|Ga0068861_100717088	Not Available	931	Open in IMG/M
3300005834\|Ga0068851_11018034	Not Available	523	Open in IMG/M
3300006572\|Ga0074051_11089985	Not Available	582	Open in IMG/M
3300006572\|Ga0074051_11490143	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → unclassified Acidimicrobiia → Acidimicrobiia bacterium	951	Open in IMG/M
3300006576\|Ga0074047_12046506	Not Available	629	Open in IMG/M
3300006581\|Ga0074048_10003693	Not Available	537	Open in IMG/M
3300006853\|Ga0075420_100413681	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Propionibacteriaceae	1165	Open in IMG/M
3300006871\|Ga0075434_100056768	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	3891	Open in IMG/M
3300006880\|Ga0075429_100083749	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2780	Open in IMG/M
3300006881\|Ga0068865_100531756	Not Available	985	Open in IMG/M
3300007076\|Ga0075435_100072296	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2817	Open in IMG/M
3300007076\|Ga0075435_100961214	Not Available	745	Open in IMG/M
3300009100\|Ga0075418_10188956	Not Available	2193	Open in IMG/M
3300009100\|Ga0075418_11295188	Not Available	790	Open in IMG/M
3300009545\|Ga0105237_11110097	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	798	Open in IMG/M
3300009551\|Ga0105238_10391874	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1381	Open in IMG/M
3300009840\|Ga0126313_10442882	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1035	Open in IMG/M
3300010036\|Ga0126305_10371603	All Organisms → cellular organisms → Bacteria → Terrabacteria group	939	Open in IMG/M
3300010041\|Ga0126312_11316277	Not Available	535	Open in IMG/M
3300010166\|Ga0126306_10703927	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	810	Open in IMG/M
3300012200\|Ga0137382_10919228	Not Available	630	Open in IMG/M
3300012915\|Ga0157302_10170208	Not Available	757	Open in IMG/M
3300012939\|Ga0162650_100002374	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1939	Open in IMG/M
3300012951\|Ga0164300_10555581	All Organisms → cellular organisms → Bacteria	668	Open in IMG/M
3300012988\|Ga0164306_11683697	Not Available	549	Open in IMG/M
3300013104\|Ga0157370_11720516	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	563	Open in IMG/M
3300013296\|Ga0157374_11729317	Not Available	650	Open in IMG/M
3300013307\|Ga0157372_12365217	Not Available	610	Open in IMG/M
3300014326\|Ga0157380_13430645	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	507	Open in IMG/M
3300014497\|Ga0182008_10539384	Not Available	647	Open in IMG/M
3300015371\|Ga0132258_10493307	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3061	Open in IMG/M
3300015373\|Ga0132257_104031148	Not Available	534	Open in IMG/M
3300015374\|Ga0132255_100058077	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	5079	Open in IMG/M
3300015374\|Ga0132255_104401623	Not Available	597	Open in IMG/M
3300017965\|Ga0190266_10227913	Not Available	915	Open in IMG/M
3300017965\|Ga0190266_10245434	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae → Arthrobacter → unclassified Arthrobacter → Arthrobacter sp. 49Tsu3.1M3	894	Open in IMG/M
3300017965\|Ga0190266_10291383	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	845	Open in IMG/M
3300018000\|Ga0184604_10098910	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium	901	Open in IMG/M
3300018027\|Ga0184605_10534050	Not Available	507	Open in IMG/M
3300018054\|Ga0184621_10341978	Not Available	526	Open in IMG/M
3300018066\|Ga0184617_1180697	Not Available	626	Open in IMG/M
3300018073\|Ga0184624_10059747	Not Available	1564	Open in IMG/M
3300018083\|Ga0184628_10649923	Not Available	529	Open in IMG/M
3300018476\|Ga0190274_13020650	Not Available	565	Open in IMG/M
3300019767\|Ga0190267_10554063	Not Available	697	Open in IMG/M
3300019875\|Ga0193701_1011312	Not Available	1772	Open in IMG/M
3300019884\|Ga0193741_1067067	Not Available	923	Open in IMG/M
3300019884\|Ga0193741_1142655	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	596	Open in IMG/M
3300021078\|Ga0210381_10025917	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae → Rhodococcus → Rhodococcus opacus	1607	Open in IMG/M
3300021078\|Ga0210381_10289518	Not Available	589	Open in IMG/M
3300022534\|Ga0224452_1026416	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae → Rhodococcus → Rhodococcus opacus	1652	Open in IMG/M
3300022694\|Ga0222623_10078114	Not Available	1283	Open in IMG/M
3300025899\|Ga0207642_10833904	Not Available	588	Open in IMG/M
3300025919\|Ga0207657_10830142	Not Available	714	Open in IMG/M
3300025937\|Ga0207669_11650533	All Organisms → cellular organisms → Bacteria	547	Open in IMG/M
3300025938\|Ga0207704_11951273	Not Available	505	Open in IMG/M
3300028704\|Ga0307321_1036806	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	902	Open in IMG/M
3300028705\|Ga0307276_10085552	Not Available	746	Open in IMG/M
3300028707\|Ga0307291_1003833	Not Available	3216	Open in IMG/M
3300028708\|Ga0307295_10222643	Not Available	538	Open in IMG/M
3300028709\|Ga0307279_10001092	Not Available	2333	Open in IMG/M
3300028710\|Ga0307322_10017705	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae → Rhodococcus → Rhodococcus opacus	1622	Open in IMG/M
3300028711\|Ga0307293_10294730	Not Available	514	Open in IMG/M
3300028712\|Ga0307285_10046777	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1071	Open in IMG/M
3300028712\|Ga0307285_10106061	Not Available	745	Open in IMG/M
3300028714\|Ga0307309_10087611	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae	728	Open in IMG/M
3300028717\|Ga0307298_10177198	Not Available	624	Open in IMG/M
3300028718\|Ga0307307_10003915	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia → unclassified Frankia → Frankia sp. Ea1.12	3782	Open in IMG/M
3300028718\|Ga0307307_10253281	Not Available	563	Open in IMG/M
3300028719\|Ga0307301_10190225	Not Available	665	Open in IMG/M
3300028721\|Ga0307315_10175547	Not Available	657	Open in IMG/M
3300028722\|Ga0307319_10115733	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	862	Open in IMG/M
3300028744\|Ga0307318_10003776	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	4915	Open in IMG/M
3300028744\|Ga0307318_10271425	Not Available	592	Open in IMG/M
3300028768\|Ga0307280_10022431	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Propionibacteriaceae → Microlunatus → Microlunatus phosphovorus → Microlunatus phosphovorus NM-1	1827	Open in IMG/M
3300028771\|Ga0307320_10090277	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1158	Open in IMG/M
3300028778\|Ga0307288_10011310	Not Available	2751	Open in IMG/M
3300028782\|Ga0307306_10009979	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Propionibacteriaceae → Microlunatus → Microlunatus phosphovorus → Microlunatus phosphovorus NM-1	2023	Open in IMG/M
3300028784\|Ga0307282_10013181	Not Available	3354	Open in IMG/M
3300028784\|Ga0307282_10604365	Not Available	532	Open in IMG/M
3300028787\|Ga0307323_10273125	Not Available	608	Open in IMG/M
3300028790\|Ga0307283_10088077	Not Available	796	Open in IMG/M
3300028791\|Ga0307290_10100095	Not Available	1056	Open in IMG/M
3300028793\|Ga0307299_10051401	Mycobacterium ulcerans	1518	Open in IMG/M
3300028810\|Ga0307294_10007261	Not Available	2691	Open in IMG/M
3300028811\|Ga0307292_10115451	Not Available	1065	Open in IMG/M
3300028814\|Ga0307302_10105251	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae → Rhodococcus → Rhodococcus opacus	1349	Open in IMG/M
3300028824\|Ga0307310_10333667	Not Available	743	Open in IMG/M
3300028876\|Ga0307286_10404251	Not Available	512	Open in IMG/M
3300028880\|Ga0307300_10136564	Not Available	763	Open in IMG/M
3300028884\|Ga0307308_10028835	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2574	Open in IMG/M
3300028885\|Ga0307304_10003280	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	4676	Open in IMG/M
3300028885\|Ga0307304_10400720	Not Available	619	Open in IMG/M
3300031058\|Ga0308189_10130855	Not Available	837	Open in IMG/M
3300031058\|Ga0308189_10403549	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	566	Open in IMG/M
3300031092\|Ga0308204_10030928	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → unclassified Acidimicrobiia → Acidimicrobiia bacterium	1186	Open in IMG/M
3300031093\|Ga0308197_10015344	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae → Rhodococcus → Rhodococcus opacus	1569	Open in IMG/M
3300031093\|Ga0308197_10307874	Not Available	587	Open in IMG/M
3300031094\|Ga0308199_1189321	Not Available	512	Open in IMG/M
3300031114\|Ga0308187_10376061	Not Available	555	Open in IMG/M
3300032075\|Ga0310890_10383864	Not Available	1038	Open in IMG/M
3300032174\|Ga0307470_11602106	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Propionibacteriaceae → Tessaracoccus → Tessaracoccus flavus	545	Open in IMG/M
3300032180\|Ga0307471_101203965	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	922	Open in IMG/M
3300032180\|Ga0307471_103729635	Not Available	539	Open in IMG/M
3300033550\|Ga0247829_10161386	Not Available	1754	Open in IMG/M
3300034676\|Ga0314801_096652	Not Available	656	Open in IMG/M
3300034676\|Ga0314801_152979	Not Available	560	Open in IMG/M
3300034690\|Ga0364923_0056522	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Propionibacteriaceae → Microlunatus	937	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	74.14%
Host-Associated	Host-Associated	25.86%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	65.52%
Plants	Host-Associated → Plants	25.86%
Aquatic	Environmental → Aquatic	8.62%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	63.79%
Rhizosphere	Host-Associated → Plants → Rhizosphere	17.24%
Rhizoplane	Host-Associated → Plants → Rhizoplane	8.62%
Sediment	Environmental → Aquatic → Sediment	6.90%
Freshwater	Environmental → Aquatic → Freshwater	1.72%
Floodplain	Environmental → Terrestrial → Floodplain	0.86%
Agricultural Field	Environmental → Terrestrial → Agricultural Field	0.86%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	62.07%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	12.07%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	6.90%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	5.17%
Soil	Host-Associated → Plants → Rhizosphere → Soil	5.17%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	3.45%
Sediment	Environmental → Aquatic → Freshwater → Sediment	1.72%
Loam	Environmental → Terrestrial → Soil → Loam	1.72%
Sediment	Environmental → Terrestrial → Floodplain → Sediment	0.86%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified	0.86%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	55.17%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	12.07%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	6.90%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	5.17%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	5.17%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	3.45%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	3.45%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	2.59%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	1.72%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	1.72%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.86%
Unclassified	Environmental → Terrestrial → Floodplain → Sediment → Unclassified	0.86%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified	0.86%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	47.41%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	6.03%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	5.17%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	3.45%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	3.45%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	3.45%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	3.45%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	2.59%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	2.59%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	2.59%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	1.72%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	1.72%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	1.72%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	1.72%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.72%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.72%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	1.72%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	0.86%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.86%
Sediment	Environmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment	0.86%
Soil	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified → Soil	0.86%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.86%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.86%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.86%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.86%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.86%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000559	Amended soil microbial communities from Kansas Great Prairies, USA - control no BrdU total DNA F1.4 TC clc assemly	Environmental	Open in IMG/M
3300002568	Grasslands soil microbial communities from Hopland, California, USA - 2	Environmental	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005339	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG	Host-Associated	Open in IMG/M
3300005347	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG	Host-Associated	Open in IMG/M
3300005356	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG	Host-Associated	Open in IMG/M
3300005563	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2	Host-Associated	Open in IMG/M
3300005719	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2	Host-Associated	Open in IMG/M
3300005834	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2	Host-Associated	Open in IMG/M
3300006572	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHPB (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006576	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLPA (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006581	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLPB (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006853	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD4	Host-Associated	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300006880	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3	Host-Associated	Open in IMG/M
3300006881	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2	Host-Associated	Open in IMG/M
3300007076	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4	Host-Associated	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009545	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG	Host-Associated	Open in IMG/M
3300009551	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG	Host-Associated	Open in IMG/M
3300009840	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105A	Environmental	Open in IMG/M
3300010036	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot26	Environmental	Open in IMG/M
3300010041	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot104A	Environmental	Open in IMG/M
3300010166	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot27	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012915	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S103-311B-2	Environmental	Open in IMG/M
3300012939	Agricultural soil microbial communities from Tamara ranch near Red Deer, Alberta, Canada - d1t1i015	Environmental	Open in IMG/M
3300012951	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MG	Environmental	Open in IMG/M
3300012988	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_242_MG	Environmental	Open in IMG/M
3300013104	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG	Host-Associated	Open in IMG/M
3300013296	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG	Host-Associated	Open in IMG/M
3300013307	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG	Host-Associated	Open in IMG/M
3300014326	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG	Host-Associated	Open in IMG/M
3300014497	Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG	Host-Associated	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300017965	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 220 T	Environmental	Open in IMG/M
3300018000	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_5_coex	Environmental	Open in IMG/M
3300018027	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_coex	Environmental	Open in IMG/M
3300018054	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_b1	Environmental	Open in IMG/M
3300018066	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_5_b1	Environmental	Open in IMG/M
3300018073	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_5_b1	Environmental	Open in IMG/M
3300018083	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_5_b1	Environmental	Open in IMG/M
3300018476	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 T	Environmental	Open in IMG/M
3300019767	Populus adjacent soil microbial communities from riparian zone of Oak Creek, Arizona, USA - 239 T	Environmental	Open in IMG/M
3300019875	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U3s2	Environmental	Open in IMG/M
3300019884	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L2s2	Environmental	Open in IMG/M
3300021078	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_5_coex redo	Environmental	Open in IMG/M
3300022534	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_30_b1	Environmental	Open in IMG/M
3300022694	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_30_coex	Environmental	Open in IMG/M
3300025899	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025919	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025937	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025938	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028704	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_379	Environmental	Open in IMG/M
3300028705	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_115	Environmental	Open in IMG/M
3300028707	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_148	Environmental	Open in IMG/M
3300028708	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_152	Environmental	Open in IMG/M
3300028709	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_118	Environmental	Open in IMG/M
3300028710	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_380	Environmental	Open in IMG/M
3300028711	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_150	Environmental	Open in IMG/M
3300028712	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_139	Environmental	Open in IMG/M
3300028714	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_196	Environmental	Open in IMG/M
3300028717	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_158	Environmental	Open in IMG/M
3300028718	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_194	Environmental	Open in IMG/M
3300028719	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_182	Environmental	Open in IMG/M
3300028721	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_355	Environmental	Open in IMG/M
3300028722	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_368	Environmental	Open in IMG/M
3300028744	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_367	Environmental	Open in IMG/M
3300028768	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_119	Environmental	Open in IMG/M
3300028771	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_369	Environmental	Open in IMG/M
3300028778	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_142	Environmental	Open in IMG/M
3300028782	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_193	Environmental	Open in IMG/M
3300028784	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_121	Environmental	Open in IMG/M
3300028787	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_381	Environmental	Open in IMG/M
3300028790	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_122	Environmental	Open in IMG/M
3300028791	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_144	Environmental	Open in IMG/M
3300028793	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_159	Environmental	Open in IMG/M
3300028810	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_151	Environmental	Open in IMG/M
3300028811	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_149	Environmental	Open in IMG/M
3300028814	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_183	Environmental	Open in IMG/M
3300028824	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_197	Environmental	Open in IMG/M
3300028876	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_140	Environmental	Open in IMG/M
3300028880	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_181	Environmental	Open in IMG/M
3300028884	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_195	Environmental	Open in IMG/M
3300028885	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_185	Environmental	Open in IMG/M
3300031058	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_184 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031092	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_367 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031093	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_198 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031094	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_203 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031114	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_182 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300032075	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D3	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300033550	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day4	Environmental	Open in IMG/M
3300034676	Metatranscriptome of lab incibated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48R2 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300034690	Sediment microbial communities from East River floodplain, Colorado, United States - 60_j17	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
F14TC_1002469911	3300000559	Soil	NPPSVAAVTTTIVVVQTVLGLLGFWVAGTQVKSIIKGSAKLRAIGAIWSMLLHGEIRGQGDVADDPNEGRPPREDA*
C688J35102_1209651504	3300002568	Soil	TIIGLLGFWVAGAAVKSIIKGSTMRHALVAIWSMLIHGEIRGQGEVGNDPNEGRPPREDA
Ga0062594_1007637901	3300005093	Soil	GFWVAGAAVKSIIKGSTMRHALAAIWSMLIHGDIRGQGDVGNAPNEGDPNEGRPPHEDA*
Ga0070660_1009810061	3300005339	Corn Rhizosphere	GLLGFWVAGAAVKSIIKGSTMRHSLVAIWSMLIHGDIRGQGEVVNAPNEGDPKEVRPPREDA*
Ga0070668_1005489291	3300005347	Switchgrass Rhizosphere	IILAVQTIIGLLGFWVAGAAVKSIIKGSTMRHALAAIWSMLIHGDIRGQGDVGNAPNEGDPNEGRPPHEDA*
Ga0070674_1016519631	3300005356	Miscanthus Rhizosphere	VTTAILVVQTIIGLVGLWVAGTQVKSIVKGSTKRHAIAAIWSILLHGDTAAYGDGGKNPKEGPPPRGDA*
Ga0070674_1019713931	3300005356	Miscanthus Rhizosphere	PPTVAAVTTTIVVVQTILGLIGLWVAGTQVKSIIKGTTKRQAIRALWSILLHGDTRDQGLVDNGPKQARPREKA*
Ga0068855_1024774222	3300005563	Corn Rhizosphere	GLLGFWVAGAAVKSIIKGSTMRHALAAIWSMLIHGDIRGQGDVGNAPNEGDPNEGRPPHEDA*
Ga0068861_1007170881	3300005719	Switchgrass Rhizosphere	VAGAAVKSIIKGSTMRHSLVAIWSMLIHGDIRGQGEVVNAPNEGDPKEVRPPREDA*
Ga0068851_110180341	3300005834	Corn Rhizosphere	SKPPSVAAVTTAIVAVQTVLGLLGFWVAGAAVKSIIKGSTMRHSLVAIWSMLIHGDIRGQGEVVNAPNEGDPKEVRPPREDA*
Ga0074051_110899851	3300006572	Soil	VQTILGLIGSWVAGTQVKSIIKGSTKRQALGAIWSILIHGEVRGQGDVGKDLNEGDPIEGRPPREDA*
Ga0074051_114901431	3300006572	Soil	IVIVQTIIGLLGSWVAGTQVKSILKGSTKRHALGAIWSILLHGEIRGQGDAGTDPNEGDPNEERPPREDA*
Ga0074047_120465061	3300006576	Soil	TIVIVQTIIGLLGSWVAGTQVKSILKGSTKRHALGAIWSILLHGEIRGQGDAGTDPNEGDPNEERPPREDA*
Ga0074048_100036932	3300006581	Soil	TTAIVVVQTILGLIGSWVAGTQVKSIIKGSTKRQALGAIWSILIHGEVRGQGDVGKDLNEGDPIEGRPPHEDA*
Ga0075420_1004136811	3300006853	Populus Rhizosphere	LSGLSNPPSVVAVTTIIVVVQTILGLLGFWVAGAAVKSIIKGSTIRHALGAIWSMLIHGDIRGQRDVGDDPNEGRPPYMDS*
Ga0075434_1000567681	3300006871	Populus Rhizosphere	AVQTIIGLLGFWVAGAAVKSIIKGSTMRHALAAIWSMLIHGDIRGQGDVGNAPNEGDPNEGRPPHEDA*
Ga0075429_1000837495	3300006880	Populus Rhizosphere	LSGLSNPPSVAAVTTTIVAVQTIIGLLGFWVAGAAVKSIIKGSTMRHALAAIWSMLIHGDIRGQGDVGNAPNEGDPNEGRPPHEDA*
Ga0068865_1005317561	3300006881	Miscanthus Rhizosphere	VVSAVLGVGALYRAPTQRAHPPSVAAVTTSIVAVQTIIGLLGFWVAGTEVKSIIKGSTKRHAIAAIWSIFLHGEIRGHSDPGVDPEEGRPPQDDA*
Ga0075435_1000722965	3300007076	Populus Rhizosphere	VQTIIGLLGFWVAGAAVKSIIKGSTMRHALAAIWSMLIHGDIRGQGDVGNAPNEGDPNEGRPPHEDA*
Ga0075435_1009612142	3300007076	Populus Rhizosphere	AVQTIIGLLGFWVAGAAVKSIIKGSTMRHALGAIWSMLIHGDLRGQGAVGTDPQGGRPPPEEA*
Ga0075418_101889563	3300009100	Populus Rhizosphere	VQTIIGLLGFWVAGAAVKSIIKGSTMRHALGAIWSMLIHGDLRGQGAVGTDPQGGRPPPEEA*
Ga0075418_112951881	3300009100	Populus Rhizosphere	SNPPSVAAVTTTIVVVQTILGLLGFWVAGTQVKSIIKGSAKLRAIGAIWSMLLHGEIQGQGDVGDDPNEGRPPREGG*
Ga0105237_111100971	3300009545	Corn Rhizosphere	PSVAAVTTSIIAAQTIMGLLGFWVAGTEVKSIIKGSTKRHAIAAIWSIFLHGEIRGHSDPGVDPEEGRPPQDGA*
Ga0105238_103918742	3300009551	Corn Rhizosphere	TQRAHPPSVAAVTTSIVAVQTIIGLLGFWVAGTEVKSIIKGSTKRHAIAAIWSIFLHGEIRGHSDPGVDPEEGRPPQDGA*
Ga0126313_104428821	3300009840	Serpentine Soil	LSNPPSVAAVTTAIVVVQTILGLLGFWVAGTEVKSIIKGSTMRHALRAIWSMLLHGEIRGNGIDPNEERPPRDG*
Ga0126305_103716033	3300010036	Serpentine Soil	GLSNPPSVAAVTTTIVAVQTILGLLGFWVAGKEVKSIIKGSTMRHALRAIWSMLLHGEIRGNGIDPNEERPPRDG*
Ga0126312_113162771	3300010041	Serpentine Soil	VTTTIVVVQTILGLLGFWVAGTQVKSIIKGSAKLRAIGAIWSMLLHGDIRGQGDVGHDPNEGRPPREDA*
Ga0126306_107039273	3300010166	Serpentine Soil	GPTIAHSLNGLSNPPSVAAVTTTIVAVQTILGLLGFWVAGTEVKSIIKGSTMRHALRAIWSMLLHGDIRGHGMDPNEGRPPRDDG*
Ga0137382_109192281	3300012200	Vadose Zone Soil	IVVVQTILGLLGFWVAGTQVKSIIKGSTKRHALGAIWSILLHGEIRGQGDVGNDPNEGRPPPEDA*
Ga0157302_101702083	3300012915	Soil	VAAVTTTIVAVQTIIGLLGFWVAGAAVKSIIKGSTMRHALGAIWSMLIHGDLRGQSAVAKDPNEGRPPHEEA*
Ga0162650_1000023744	3300012939	Soil	VTTAILVVQTIIGLLGFWVAGAAVKSIIKGSTMRHALRAIWSMLIHGDVRGQGDVGNDPNEGPPPREDA*
Ga0164300_105555812	3300012951	Soil	GFWVAGAAVKSIIKGSTMRHALAAIWSMLIHGDIRGQSDVGNYPNEERPPHEDA*
Ga0164306_116836971	3300012988	Soil	SNPPSVTEVTTIIVVVQTIIGLIGFWVAGTGVKSIIKGSTKRHALGAIWSIFVHGDIRGQADAGNDPNKTRTTPEEAG*
Ga0157370_117205162	3300013104	Corn Rhizosphere	SNPPSVAAVTTSIVAVQTIIGLLGFWVAGTEVKSIIKGSTKRHAIAAIWSIFLHGEIRGHSDPGVDPEEGRPPQDDA*
Ga0157374_117293172	3300013296	Miscanthus Rhizosphere	ADVTTIIVAVQTIIGLLGFWVAGAAVKSIIKGSTMRHALSAIWSMLIHGDIRGQGDVGNAPNEGDPNEGRPPHEDA*
Ga0157372_123652172	3300013307	Corn Rhizosphere	LAPYIANSLSGGSSSPSVADVTTIIVAVQTVIGLLGFWVAGAAVKSIIKGSTMRHALVAIWSMLIHGDIRGQGDVGSAPKEGDPKDGRPPDEDA*
Ga0157380_134306451	3300014326	Switchgrass Rhizosphere	APTQRAHPPSVAAVTTSIVAVQTIIGLLGFWVAGTEVKSIIKGSTKRHAIAAIWSIFLHGEIRGHSDPGVDPEEGRPPQDGA*
Ga0182008_105393841	3300014497	Rhizosphere	VAAVTTAIVVVQTIIGLLGFWVAGAAVKSIIKGSTMRHALGAIWSMLIHGDLRGQGDVGSDPNEGRPPREDA*
Ga0132258_104933075	3300015371	Arabidopsis Rhizosphere	AGAAVKSIIKGSTMRHALVAIWSMLIHGDIRGQGEVVNAPNEGDPNEGRPPREDA*
Ga0132257_1040311481	3300015373	Arabidopsis Rhizosphere	NPPSVADVTTIIVAVQTILGLLGFWVAGAAVKSIIRGSTMRHALVAIWSMLIHGDIRGQGEVVNAPNEGDPNEGRPPREDA*
Ga0132255_1000580776	3300015374	Arabidopsis Rhizosphere	TTAIVAVQTILGLLGFWVAGAAVKAINKGSTMRHALVAIWSMLIHGDIRGQGEVVNAPSEGDPNEGRPPREDA*
Ga0132255_1044016231	3300015374	Arabidopsis Rhizosphere	IANSLSGLSNPPSVAAVTTAIVAVQTIIGLLGFWVAGAAVKSIIKGSTMRHALRAIWSMLIHGDLRGQSAVGKNPNEERPPHGEA*
Ga0190266_102279132	3300017965	Soil	VAVVTTAIVVVQTIIGLLGFWVAGAAVKSIIKGSTMRHALVAIWSMLIHGEIRGQGEVGNDPNEGRPPREDA
Ga0190266_102454342	3300017965	Soil	AAVTTAIVVVQTIFGLLGFWVAGTEVKSIIKGSTMRHALGAIWSILIHGDLRGQGDVGIDPNEGPPRDAG
Ga0190266_102913831	3300017965	Soil	SNPPSVAAVTTAIVVVQTILGLLGFWVAGTEVKSIIKGSTMWHALGAIWSILLHGSIRGQAGNGMNSGAGSPPSN
Ga0184604_100989101	3300018000	Groundwater Sediment	PPSVAAVTTTILVVQTVLGLLGFWVAGTQVKSIIKGSAKLRAIGAIWSMLLHGEIRGQGDVGDGANEGRPPHEDA
Ga0184605_105340501	3300018027	Groundwater Sediment	NPPSVVAVTTAIVVVQTILGLLGFWVAGAAVKSIIKGSTMRHALGAIWSMLIHGDLRGQGDVVDDPNEEQPPREDA
Ga0184621_103419781	3300018054	Groundwater Sediment	LGLLGFWVAGAAVKSIIKGSTMRHALVAIWSMLIHGDIRGQGDVGNDPNEGRPPGKDA
Ga0184617_11806972	3300018066	Groundwater Sediment	VVQTILGLLGFWVAGAAVKSIIKGSTMRHALGAIWSMLIHGDLRGQGDVVDDPNEEQPPREDA
Ga0184624_100597474	3300018073	Groundwater Sediment	GLSNPPSVAAVTTTILVVQTIIGLLGFWVAGAAVKSIIKGSTMRHALGAIWSMLIHGEIRGQGEVGNDPTEGRREDA
Ga0184628_106499231	3300018083	Groundwater Sediment	VQTLLGLLGFWVAGAAVKSIIKGSTMRHALGAIWSMLIHGDIRGQSDVGNDPNEERPHTRTPSCFAVADR
Ga0190274_130206501	3300018476	Soil	PPSVAAVTTTILVVQTIIGLLGFWVAGAAVKSIIKGSTMRHALGAIWSMLIHGEIRGQGDVGNDPNEPRPPGVDA
Ga0190267_105540631	3300019767	Soil	SVAAVTTTILVVQTILGLLGFWVAGTEVKSIIKGSTMRHALGAIWSMLIHGDIRGQGEVGNDPSEGRREDA
Ga0193701_10113122	3300019875	Soil	TILVVQTIIGLLGFWVAGAAVKSIIKGSTMRHALVAIWSMLIHGEIRGQGEVVNAPNEGDPNEGRPPREDA
Ga0193741_10670671	3300019884	Soil	VPEWGPGTVRGQVTTTIVVVQTLLGLLGFWVAGTQVKSIIKGSAKLRAIGAIWSIFLHGDIRGQGDIGNDLNEGRPPREDA
Ga0193741_11426551	3300019884	Soil	SLSGLSNPPSVAAVTTTIVVVQTIIGLLGFWVAGTEVKSIIKGSTMKRALSALWSMFIHGEVRGHDTVGTDPSEGRPPPEDR
Ga0210381_100259173	3300021078	Groundwater Sediment	TTAIVVVQTIIGLLGFWVAGAAVKSIIKGSTMRHALVAIWSMLIHGEIRGQGEVGNDPNEGRPPREDA
Ga0210381_102895181	3300021078	Groundwater Sediment	NSLSGLSNPPSVAAVTTTILVVQTIIGLLGFWVAGAAVKSIIKGSTMRHALGAIWSMLIHGDLRGQGDVVDDPNEGRHPREDA
Ga0224452_10264161	3300022534	Groundwater Sediment	VTTAIVVAQTIIGLLGFWVAGAAVKSIIKGSTMRHALVAIWSMLIHGEIRGQGEVGNDPNEGRPPRGDA
Ga0222623_100781143	3300022694	Groundwater Sediment	TTTILVVQTIIGLLGFWVAGAAVKSIIKGSTMRHALGAIWSMLIHGEIRGQGEVGNDPTEGRREDA
Ga0207642_108339042	3300025899	Miscanthus Rhizosphere	SGGSSSPSVADVTTIIVAVQTVIGLLGFWVAGAAVKSIIKGSTMRHALVAIWSMLIHGDIRGQGDVGSAPKEGDPKDGRPPHEDA
Ga0207657_108301422	3300025919	Corn Rhizosphere	NSPSVADVTTIIVAVQTIIGLLGFWVAGAAVKSIIKGSTMRHALAAIWSMLIHGDIRGQGDVGNAPNEGDPNEGRPPHEDA
Ga0207669_116505331	3300025937	Miscanthus Rhizosphere	LSGGSNSPSVADVTTIIVAVQTIIGLVGLWVAGTQVKSIIKGTTKRQAIRALWSILLHGDTRDQGLVDNGPKQARPREKA
Ga0207704_119512731	3300025938	Miscanthus Rhizosphere	TTIIVAVQTIIGLLGFWVAGAAVKSIIKGSTMRHALAAIWSMLIHGDIRGQGDVGNAPNEGDPNEGRPPHEDA
Ga0307321_10368061	3300028704	Soil	SGLSNPPSVAAVTTTIVVVQTIIGLLGFWVAGAQVKSIIKGSTMRNALGAIWSMLLHGEVQGHGEVGNDPNEGRPPRKDA
Ga0307276_100855521	3300028705	Soil	AVTTAIVVVQTIIGLLGFWVAGAAVKSIIKGSTMRHALVAIWSMLIHGEIRGQDEVGNDPNEGRPPREDA
Ga0307291_10038331	3300028707	Soil	VAAVTTTILVVQTIIGLLGFWVAGAAVKSIIKGSTMRHALVAIWSMLIHGEIRGQGEVVNAPNEGDPNEGRPPREDA
Ga0307295_102226431	3300028708	Soil	AAVTTTILVVQTILGLLGFWVAGTEVKSIIKGSTKRHALGSIWSILLHGEIRGQGSAGNDPNEGRREDA
Ga0307279_100010921	3300028709	Soil	AVTTAILVVQTIIGLLGFWVAGAAVKSIIKGSTMRHALGAIWSMLIHGEIRGQGEVGNDPTEGRREDA
Ga0307322_100177051	3300028710	Soil	VTTAIVVVQTIIGLLGFWVAGAAVKSIIKGSTMRHALVAIWSMLIHGEIRGQGEVGNDPNEGRPPRGDA
Ga0307293_102947301	3300028711	Soil	GAAVKSIIKGSTMRHALVAIWSMLIHGDIRGQGEAVNDPNEGQPNEGRPPRDED
Ga0307285_100467774	3300028712	Soil	ARTIIGLLGFWVAGAAVKSIIKGSTMRHALVAIWSMLIHGEIRGQGEVGNDPNEGRPPRGDA
Ga0307285_101060611	3300028712	Soil	IIGLLGFWVAGAAVKSIIKGSTMRHALAAIWSMLIHGDIRGQGDVGDDANEGRPPREDA
Ga0307309_100876112	3300028714	Soil	AVTTTIVVAQTIIGLLGFWVAGTEVKSLIKGSSLKHALGAVWSVIVHGDVRDQGDVTTDPDEGRPPREDVV
Ga0307298_101771981	3300028717	Soil	GLLGFWVAGAAVKSIIKGSTMRHALVAIWSMLIHGDIRGQGEAVNDPNEGQPNEGRPPRDED
Ga0307307_100039151	3300028718	Soil	IIGLLGFWVAGAAVKSIIKGSTMRHALVAIWSMLIHGDIRGQGEAVNDPNEGQPNEGRPPRDED
Ga0307307_102532811	3300028718	Soil	TTTIVVVQTIIGLLGFWVAGTEVKSLIKGSSLKHALGAVWSVIVHGDVRDQGDVTTDPDEGRPPREDVV
Ga0307301_101902251	3300028719	Soil	SLSGLSNPPSVAAVTTAIVVVQTIIGLLGFWVAGAAVKSIIKGSTMRHALVAIWSMLIHGEIRGQGEVGNDPNEGRPPREDA
Ga0307315_101755471	3300028721	Soil	GLSSPPSVAAVTTAIVVAQTIIGLLGFLVAGAAVKSIIKGSTMRHALVAIWSMLIHGEIRGQGEVGNDPNEGRPPRGDA
Ga0307319_101157332	3300028722	Soil	ILGLLGFWVAGTEVKSIIKGSTMRHALVAIWSMLLRGEIRGQGDVDNGPKRRPPREDA
Ga0307318_100037765	3300028744	Soil	VTTTIVVVQTIIGLLGFWVAGAQVKSIIKGSTMRNALGAIWSMLLHGEVQGHGEVGNDPNEGRPPRKDA
Ga0307318_102714251	3300028744	Soil	GLLGFWVAGAAVKSIIKGSTMRHALVAIWSMLIHGEIRGQGEVGNDPNEGRPPREDA
Ga0307280_100224311	3300028768	Soil	LLGFWVAGAAVKSIIKGSTMRHALVAIWSMLIHGDIRGQGEAVNDPNEGQPNEGRPPRDE
Ga0307320_100902771	3300028771	Soil	VAQTIIGLLGFWVAGAAVKSIIKGSTMRHALVAIWSMLIHGEIRGQGEVGNDPNEGRPPRGDA
Ga0307288_100113102	3300028778	Soil	VVQTIIGLLGFWVAGAAVKSIIKGSTMRHALVAIWSMLIHGEIRGQGEVVNAPNEGDPNEGRPPREDA
Ga0307306_100099792	3300028782	Soil	GFWVAGAAVKSIIKGSTMRHALVAIWSMLIHGDIRGQGEAVNDPNEGQPNEGRPPRDED
Ga0307282_100131812	3300028784	Soil	GLSNPPSVAAVTTTILVVQTIIGLLGFWVAGAAVKSIIKGSTMRHALVAIWSMLIHGEIRGQGEVVNAPNEGDPNEGRPPREDA
Ga0307282_106043652	3300028784	Soil	LGFWVAGAAVKSIIKGSTMRHALVAIWSMLIHGEIRGQGDAGSDPNEGQPNEGRPPRDED
Ga0307323_102731251	3300028787	Soil	SVADVTTIIVAVQTVIGLLGFWVAGAAVKSIIKGSTMRHALVAIWSMLIHGDIRGQGDVGNAPKEGDPKDGRPPHEDA
Ga0307283_100880771	3300028790	Soil	PPSVAAVTTTILVVQTVLGLLGFWVAGAAVKSIIKGSTMRHALGAIWSMLIHGNLRGQGDAGNDPNEGRSEDA
Ga0307290_101000954	3300028791	Soil	TTAIVVAQTIIGLLGFWVAGAAVKSIIKGSTMRHALVAIWSMLIHGEIRGQGEVGNDPNEGRPPRGDA
Ga0307299_100514014	3300028793	Soil	TTTILVVQTVLGLLGFWVAGTQVKSIIKGSAKLRAIGAIWSILLHGEIRGQGDVGDGANEGRPPHEDA
Ga0307294_100072612	3300028810	Soil	AVTTTILVVQTIIGLLGFWVAGAAVKSIIKGSTMRHALVAIWSMLIHGEIRGQGEVVNAPNEGDPNEGRPPREDA
Ga0307292_101154511	3300028811	Soil	TIIGLLGFWVAGAAVKSIIKGSTMRHALVAIWSMLIHGDIRGQGEAVNDPNEGQPNEGRPPRDED
Ga0307302_101052511	3300028814	Soil	SVAAVTTAIVVVQTIIGLLGFWVAGAAVKSIIKGSTMRHALVAIWSMLIHGEIRGQGEVGNDPNEGRPPREDA
Ga0307310_103336671	3300028824	Soil	VVQTVLGLLGFWVAGTQVKSIIKGSAKLRAIGAIWSMLLHGEIRGQGDVGDDANEGRPPREDA
Ga0307286_104042512	3300028876	Soil	VGLLGFWVAGAAVKSIIKGSTMRHALVAIWSMLIHGDIRGQGDVGNDPNNGDPKEGDPKEERPPHEDG
Ga0307300_101365641	3300028880	Soil	TTILVVQTIIGLLGFWVAGAAVKSIIKGATMRHALGAIWSMLIHGDLRGQGDPGNDPNEPRPPGVDA
Ga0307308_100288353	3300028884	Soil	TIIGLLGFWVAGTEVKSLIKGSSLKHALGAVWSVIVHGDVRGQGDVTTDPDEGRPPREDV
Ga0307304_100032801	3300028885	Soil	SVAAVTTTILVVQTIIGLLGFWVAGAAVKSIIKGSTMRHALVAIWSMLIHGEIRGQGEVVNAPNEGDPNEGRPPREDA
Ga0307304_104007201	3300028885	Soil	TIIGLLGFWVAGAAVKSIIKGSTMRHALVAIWSMLIHGEIRGQGEVGNDPNEGRPPRGDA
Ga0308189_101308551	3300031058	Soil	PSVAAVTTAIVVVQTIIGLLGFWVAGAAVKSIIKGSTMRHALVAIWSMLIHGEIRGQGEVGNDPNEGRPPREDA
Ga0308189_104035491	3300031058	Soil	PSVAAVTTAIVVVQTIIGLLGFWVAGAAVKSIIKGSTMRHALVAIWSMLIHGEIRGQGEAVNAPNEGQPSHDED
Ga0308204_100309281	3300031092	Soil	TIIVAVQTVVGLLGFWVAGAAVKSIIKGSTMRHALVAIWSMLIHGDIRGQSDVGNDPNEERPPRKNA
Ga0308197_100153441	3300031093	Soil	QTIIGLLGFWVAGAAVKSIIKGSTMRHALVAIWSMLIHGEIRGQGEVGNDPNEGRPPRED
Ga0308197_103078743	3300031093	Soil	FWVAGAAVKSIIKGSTMRHALVAIWSMLIHGEIRGQGEVVNAPNEGDPNEGRPPREDA
Ga0308199_11893211	3300031094	Soil	SNPPSVAAVTTTIVVAQTIIGLLGFWVAGTEVKSLIKGSSLKHALGAVWSVIVHGDVRDQGDVTTDPDEGRPPREDVV
Ga0308187_103760611	3300031114	Soil	TTIVVVQTIIGLLGFWVAGTAVKSIIKGSTKRNALGAIWSILLHGDIPGQGDVGNDPNEGGPPRKDA
Ga0310890_103838643	3300032075	Soil	IIVAVQTILGLLGFWVAGAAVKSIIKGSTMRHSLVAIWSMLIHGDIRGQGDVGNAPNEGDPNEGRPPHEDA
Ga0307470_116021061	3300032174	Hardwood Forest Soil	PPSVADVTTIIVAVQTVIGLLGFWVAGAAVKSIIKGSTMRHALAAIWSMLIHGDIRGQSDVGNYPNEERPPHEDA
Ga0307471_1012039652	3300032180	Hardwood Forest Soil	SNSPSVADVTTIIVAVQTIIGLLGFWVAGAAVKSIIKGSTMRHALAAIWSMLIHGDIRGQGDVGNAPNEGDPNEGRPPHEDA
Ga0307471_1037296351	3300032180	Hardwood Forest Soil	GSNSPSVADVTTIIVAVQTIIGLLGFWVAGAAVKSIIKGSTMRHALVAIWSMLIHGDIRGQSDVGNAPNEGDPNEERPPHEDA
Ga0247829_101613861	3300033550	Soil	VAVQTVIGLLGFWVAGAAVKSIIKGSTMRHALVAIWSMLIHGDIRGQSDVGNDPNEERPPDEDA
Ga0314801_096652_400_654	3300034676	Soil	ADSLSGGSNSPSAADVTTIILAVQTIIGLLGFWVAGAAVKSIIKGSTMRHSLVAIWSMLIHGDIRGQSDVGKDPNEERPPHEDA
Ga0314801_152979_316_558	3300034676	Soil	AHLLGAPSVAAVTTTIVVLQTVIGLLGMFVAGTQVKSIIKGSTRRHALGAIWSIFIHGEIRGQGDVGNDPKEARSPREDA
Ga0364923_0056522_686_874	3300034690	Sediment	VQTILGLLGFWVAGTGVKSIIKGATLKHALAATWSMLIHGDIRGSDKVGTDPNETRPSRKST

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F078689

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences