NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome Family F078561

Metagenome Family F078561

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F078561
Family Type Metagenome
Number of Sequences 116
Average Sequence Length 81 residues
Representative Sequence MRLRIWTTLFLVTIAQFAWGQTSTNPKLVNAEATSPEPSANSYAVLGATPEQEALVRAQIRVMQPDVYPLRVLFVPHWK
Number of Associated Samples 94
Number of Associated Scaffolds 116

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 100.00 %
% of genes near scaffold ends (potentially truncated) 96.55 %
% of genes from short scaffolds (< 2000 bps) 82.76 %
Associated GOLD sequencing projects 82
AlphaFold2 3D model prediction Yes
3D model pTM-score0.30

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Bacteria (100.000 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil
(47.414 % of family members)
Environment Ontology (ENVO) Unclassified
(45.690 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Plant → Plant rhizosphere
(49.138 % of family members)


 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      

 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: Yes Secondary Structure distribution: α-helix: 30.84%    β-sheet: 1.87%    Coil/Unstructured: 67.29%
Feature Viewer
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.30
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 116 Family Scaffolds
PF00486Trans_reg_C 67.24
PF13414TPR_11 2.59
PF13620CarboxypepD_reg 1.72
PF13424TPR_12 1.72
PF13432TPR_16 0.86
PF02899Phage_int_SAM_1 0.86
PF02954HTH_8 0.86
PF13181TPR_8 0.86
PF00691OmpA 0.86
PF04794YdjC 0.86

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 116 Family Scaffolds
COG3394Chitooligosaccharide deacetylase ChbG, YdjC/CelG familyCarbohydrate transport and metabolism [G] 0.86
COG4973Site-specific recombinase XerCReplication, recombination and repair [L] 0.86
COG4974Site-specific recombinase XerDReplication, recombination and repair [L] 0.86

 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms100.00 %
UnclassifiedrootN/A0.00 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300000789|JGI1027J11758_11891789All Organisms → cellular organisms → Bacteria548Open in IMG/M
3300001661|JGI12053J15887_10470875All Organisms → cellular organisms → Bacteria → Acidobacteria601Open in IMG/M
3300004092|Ga0062389_103745853All Organisms → cellular organisms → Bacteria → Acidobacteria571Open in IMG/M
3300005171|Ga0066677_10055731All Organisms → cellular organisms → Bacteria1989Open in IMG/M
3300005176|Ga0066679_10270238All Organisms → cellular organisms → Bacteria1100Open in IMG/M
3300005177|Ga0066690_10071219All Organisms → cellular organisms → Bacteria2175Open in IMG/M
3300005177|Ga0066690_10764001All Organisms → cellular organisms → Bacteria632Open in IMG/M
3300005178|Ga0066688_10039199All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae2679Open in IMG/M
3300005178|Ga0066688_10095963All Organisms → cellular organisms → Bacteria1805Open in IMG/M
3300005178|Ga0066688_10498316All Organisms → cellular organisms → Bacteria784Open in IMG/M
3300005186|Ga0066676_10120559All Organisms → cellular organisms → Bacteria1617Open in IMG/M
3300005450|Ga0066682_10760756All Organisms → cellular organisms → Bacteria → Acidobacteria589Open in IMG/M
3300005468|Ga0070707_100083885All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae3079Open in IMG/M
3300005554|Ga0066661_10474377All Organisms → cellular organisms → Bacteria760Open in IMG/M
3300005555|Ga0066692_10497019All Organisms → cellular organisms → Bacteria → Acidobacteria776Open in IMG/M
3300005555|Ga0066692_10775707All Organisms → cellular organisms → Bacteria → Acidobacteria591Open in IMG/M
3300005556|Ga0066707_10283080All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1085Open in IMG/M
3300005556|Ga0066707_11008071All Organisms → cellular organisms → Bacteria508Open in IMG/M
3300005557|Ga0066704_10636107All Organisms → cellular organisms → Bacteria680Open in IMG/M
3300005558|Ga0066698_10151092All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1569Open in IMG/M
3300005559|Ga0066700_10031009All Organisms → cellular organisms → Bacteria3125Open in IMG/M
3300005568|Ga0066703_10552435All Organisms → cellular organisms → Bacteria677Open in IMG/M
3300005569|Ga0066705_10161275All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1383Open in IMG/M
3300006031|Ga0066651_10222323All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1001Open in IMG/M
3300006162|Ga0075030_101470739All Organisms → cellular organisms → Bacteria533Open in IMG/M
3300006755|Ga0079222_10214466All Organisms → cellular organisms → Bacteria → Acidobacteria1172Open in IMG/M
3300006794|Ga0066658_10435522All Organisms → cellular organisms → Bacteria714Open in IMG/M
3300006796|Ga0066665_10236907All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1436Open in IMG/M
3300006797|Ga0066659_10048002All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae2677Open in IMG/M
3300006797|Ga0066659_10726730All Organisms → cellular organisms → Bacteria814Open in IMG/M
3300006797|Ga0066659_11443463All Organisms → cellular organisms → Bacteria575Open in IMG/M
3300006800|Ga0066660_10925091All Organisms → cellular organisms → Bacteria708Open in IMG/M
3300006893|Ga0073928_10674767All Organisms → cellular organisms → Bacteria723Open in IMG/M
3300007258|Ga0099793_10015515All Organisms → cellular organisms → Bacteria3042Open in IMG/M
3300007788|Ga0099795_10151353All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium950Open in IMG/M
3300009012|Ga0066710_102239648All Organisms → cellular organisms → Bacteria796Open in IMG/M
3300009038|Ga0099829_10056747All Organisms → cellular organisms → Bacteria2922Open in IMG/M
3300009088|Ga0099830_10080999All Organisms → cellular organisms → Bacteria2380Open in IMG/M
3300009088|Ga0099830_11200417All Organisms → cellular organisms → Bacteria630Open in IMG/M
3300009088|Ga0099830_11720518All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium523Open in IMG/M
3300009089|Ga0099828_10060633All Organisms → cellular organisms → Bacteria3173Open in IMG/M
3300009090|Ga0099827_11183763All Organisms → cellular organisms → Bacteria664Open in IMG/M
3300009137|Ga0066709_100883744All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1301Open in IMG/M
3300010336|Ga0134071_10541431All Organisms → cellular organisms → Bacteria604Open in IMG/M
3300011271|Ga0137393_10058233All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae3044Open in IMG/M
3300011271|Ga0137393_10148897All Organisms → cellular organisms → Bacteria1953Open in IMG/M
3300011271|Ga0137393_10982750All Organisms → cellular organisms → Bacteria719Open in IMG/M
3300012096|Ga0137389_11658621All Organisms → cellular organisms → Bacteria535Open in IMG/M
3300012189|Ga0137388_10119712All Organisms → cellular organisms → Bacteria2291Open in IMG/M
3300012189|Ga0137388_11042780All Organisms → cellular organisms → Bacteria754Open in IMG/M
3300012189|Ga0137388_11088076All Organisms → cellular organisms → Bacteria736Open in IMG/M
3300012189|Ga0137388_11499755All Organisms → cellular organisms → Bacteria612Open in IMG/M
3300012189|Ga0137388_11753520All Organisms → cellular organisms → Bacteria554Open in IMG/M
3300012199|Ga0137383_10620923All Organisms → cellular organisms → Bacteria → Acidobacteria790Open in IMG/M
3300012202|Ga0137363_10220766All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1529Open in IMG/M
3300012203|Ga0137399_11089874All Organisms → cellular organisms → Bacteria672Open in IMG/M
3300012207|Ga0137381_10342309All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1303Open in IMG/M
3300012210|Ga0137378_10598070All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1013Open in IMG/M
3300012349|Ga0137387_11052374All Organisms → cellular organisms → Bacteria582Open in IMG/M
3300012351|Ga0137386_10384759All Organisms → cellular organisms → Bacteria1010Open in IMG/M
3300012357|Ga0137384_10457404All Organisms → cellular organisms → Bacteria1050Open in IMG/M
3300012359|Ga0137385_10600962All Organisms → cellular organisms → Bacteria925Open in IMG/M
3300012361|Ga0137360_10006010All Organisms → cellular organisms → Bacteria7462Open in IMG/M
3300012361|Ga0137360_10527354All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1007Open in IMG/M
3300012361|Ga0137360_10735744All Organisms → cellular organisms → Bacteria → Acidobacteria848Open in IMG/M
3300012362|Ga0137361_10000055All Organisms → cellular organisms → Bacteria42564Open in IMG/M
3300012362|Ga0137361_10237853All Organisms → cellular organisms → Bacteria1657Open in IMG/M
3300012363|Ga0137390_11972355All Organisms → cellular organisms → Bacteria → Acidobacteria510Open in IMG/M
3300012683|Ga0137398_10027918All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae3158Open in IMG/M
3300012685|Ga0137397_10680755All Organisms → cellular organisms → Bacteria764Open in IMG/M
3300012917|Ga0137395_10673589All Organisms → cellular organisms → Bacteria → Acidobacteria748Open in IMG/M
3300012918|Ga0137396_10786397All Organisms → cellular organisms → Bacteria → Acidobacteria700Open in IMG/M
3300012922|Ga0137394_10627595All Organisms → cellular organisms → Bacteria908Open in IMG/M
3300012927|Ga0137416_10171425All Organisms → cellular organisms → Bacteria1718Open in IMG/M
3300012929|Ga0137404_12026989All Organisms → cellular organisms → Bacteria537Open in IMG/M
3300012930|Ga0137407_10340641All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1379Open in IMG/M
3300012930|Ga0137407_11266962All Organisms → cellular organisms → Bacteria700Open in IMG/M
3300012944|Ga0137410_10534336All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium962Open in IMG/M
3300015053|Ga0137405_1052054All Organisms → cellular organisms → Bacteria909Open in IMG/M
3300015264|Ga0137403_11245217All Organisms → cellular organisms → Bacteria590Open in IMG/M
3300018482|Ga0066669_10047968All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium KBS 832676Open in IMG/M
3300020199|Ga0179592_10520972All Organisms → cellular organisms → Bacteria507Open in IMG/M
3300020580|Ga0210403_10548693All Organisms → cellular organisms → Bacteria936Open in IMG/M
3300020581|Ga0210399_10044933All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium KBS 833541Open in IMG/M
3300021086|Ga0179596_10293515All Organisms → cellular organisms → Bacteria810Open in IMG/M
3300021088|Ga0210404_10254298All Organisms → cellular organisms → Bacteria956Open in IMG/M
3300021170|Ga0210400_11021553All Organisms → cellular organisms → Bacteria671Open in IMG/M
3300021180|Ga0210396_10919921All Organisms → cellular organisms → Bacteria → Acidobacteria745Open in IMG/M
3300021433|Ga0210391_10486583All Organisms → cellular organisms → Bacteria → Acidobacteria969Open in IMG/M
3300021559|Ga0210409_10809012All Organisms → cellular organisms → Bacteria → Acidobacteria810Open in IMG/M
3300024288|Ga0179589_10266514All Organisms → cellular organisms → Bacteria764Open in IMG/M
3300025922|Ga0207646_11379934All Organisms → cellular organisms → Bacteria → Acidobacteria613Open in IMG/M
3300026277|Ga0209350_1007031All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae3810Open in IMG/M
3300026330|Ga0209473_1093631All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1258Open in IMG/M
3300026334|Ga0209377_1189908All Organisms → cellular organisms → Bacteria701Open in IMG/M
3300026490|Ga0257153_1029032All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1140Open in IMG/M
3300026524|Ga0209690_1209954All Organisms → cellular organisms → Bacteria616Open in IMG/M
3300026529|Ga0209806_1008968All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae5458Open in IMG/M
3300026529|Ga0209806_1174766All Organisms → cellular organisms → Bacteria790Open in IMG/M
3300026536|Ga0209058_1169476All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium984Open in IMG/M
3300027071|Ga0209214_1017157All Organisms → cellular organisms → Bacteria912Open in IMG/M
3300027633|Ga0208988_1143873All Organisms → cellular organisms → Bacteria → Acidobacteria576Open in IMG/M
3300027643|Ga0209076_1014609All Organisms → cellular organisms → Bacteria2068Open in IMG/M
3300027663|Ga0208990_1091837All Organisms → cellular organisms → Bacteria853Open in IMG/M
3300027862|Ga0209701_10114500All Organisms → cellular organisms → Bacteria1675Open in IMG/M
3300027875|Ga0209283_10110147All Organisms → cellular organisms → Bacteria1807Open in IMG/M
3300027875|Ga0209283_10569111All Organisms → cellular organisms → Bacteria722Open in IMG/M
3300027882|Ga0209590_10549383All Organisms → cellular organisms → Bacteria → Acidobacteria744Open in IMG/M
3300027903|Ga0209488_10355865All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1088Open in IMG/M
3300027903|Ga0209488_10822822All Organisms → cellular organisms → Bacteria656Open in IMG/M
3300028536|Ga0137415_10083041All Organisms → cellular organisms → Bacteria3062Open in IMG/M
3300028906|Ga0308309_10598207All Organisms → cellular organisms → Bacteria957Open in IMG/M
3300031057|Ga0170834_106040667All Organisms → cellular organisms → Bacteria915Open in IMG/M
3300031128|Ga0170823_15709586All Organisms → cellular organisms → Bacteria669Open in IMG/M
3300031718|Ga0307474_10418803All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1044Open in IMG/M
3300031962|Ga0307479_11431076All Organisms → cellular organisms → Bacteria → Acidobacteria649Open in IMG/M


 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil47.41%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil27.59%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil6.90%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil3.45%
Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil3.45%
Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil1.72%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil1.72%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere1.72%
Bog Forest SoilEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil0.86%
Iron-Sulfur Acid SpringEnvironmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring0.86%
WatershedsEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds0.86%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil0.86%
Agricultural SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil0.86%
SoilEnvironmental → Terrestrial → Soil → Loam → Grasslands → Soil0.86%
SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Soil0.86%

Visualization
Powered by ApexCharts



Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300000789Soil microbial communities from Great Prairies - Iowa, Native Prairie soilEnvironmentalOpen in IMG/M
3300001661Mediterranean Blodgett CA OM1_O3 (Mediterranean Blodgett coassembly)EnvironmentalOpen in IMG/M
3300004092Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3EnvironmentalOpen in IMG/M
3300005171Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_126EnvironmentalOpen in IMG/M
3300005176Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128EnvironmentalOpen in IMG/M
3300005177Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139EnvironmentalOpen in IMG/M
3300005178Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137EnvironmentalOpen in IMG/M
3300005186Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125EnvironmentalOpen in IMG/M
3300005450Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_131EnvironmentalOpen in IMG/M
3300005468Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaGEnvironmentalOpen in IMG/M
3300005554Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110EnvironmentalOpen in IMG/M
3300005555Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141EnvironmentalOpen in IMG/M
3300005556Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156EnvironmentalOpen in IMG/M
3300005557Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153EnvironmentalOpen in IMG/M
3300005558Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147EnvironmentalOpen in IMG/M
3300005559Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149EnvironmentalOpen in IMG/M
3300005568Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_152EnvironmentalOpen in IMG/M
3300005569Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_154EnvironmentalOpen in IMG/M
3300006031Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Angelo_100EnvironmentalOpen in IMG/M
3300006162Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012EnvironmentalOpen in IMG/M
3300006755Agricultural soil microbial communities from Georgia to study Nitrogen management - GA PlitterEnvironmentalOpen in IMG/M
3300006794Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107EnvironmentalOpen in IMG/M
3300006796Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114EnvironmentalOpen in IMG/M
3300006797Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108EnvironmentalOpen in IMG/M
3300006800Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109EnvironmentalOpen in IMG/M
3300006893Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPA 5.5 metaGEnvironmentalOpen in IMG/M
3300007258Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3EnvironmentalOpen in IMG/M
3300007788Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2EnvironmentalOpen in IMG/M
3300009012Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159EnvironmentalOpen in IMG/M
3300009038Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaGEnvironmentalOpen in IMG/M
3300009088Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaGEnvironmentalOpen in IMG/M
3300009089Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaGEnvironmentalOpen in IMG/M
3300009090Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaGEnvironmentalOpen in IMG/M
3300009137Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158EnvironmentalOpen in IMG/M
3300010336Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09082015EnvironmentalOpen in IMG/M
3300011271Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaGEnvironmentalOpen in IMG/M
3300012096Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaGEnvironmentalOpen in IMG/M
3300012189Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaGEnvironmentalOpen in IMG/M
3300012199Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaGEnvironmentalOpen in IMG/M
3300012202Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaGEnvironmentalOpen in IMG/M
3300012203Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaGEnvironmentalOpen in IMG/M
3300012207Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaGEnvironmentalOpen in IMG/M
3300012210Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaGEnvironmentalOpen in IMG/M
3300012349Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaGEnvironmentalOpen in IMG/M
3300012351Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_100_16 metaGEnvironmentalOpen in IMG/M
3300012357Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaGEnvironmentalOpen in IMG/M
3300012359Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaGEnvironmentalOpen in IMG/M
3300012361Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaGEnvironmentalOpen in IMG/M
3300012362Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaGEnvironmentalOpen in IMG/M
3300012363Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaGEnvironmentalOpen in IMG/M
3300012683Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz2.16 metaGEnvironmentalOpen in IMG/M
3300012685Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaGEnvironmentalOpen in IMG/M
3300012917Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaGEnvironmentalOpen in IMG/M
3300012918Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaGEnvironmentalOpen in IMG/M
3300012922Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaGEnvironmentalOpen in IMG/M
3300012927Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012929Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012930Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012944Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300015053Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (PacBio error correction)EnvironmentalOpen in IMG/M
3300015264Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300018482Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118EnvironmentalOpen in IMG/M
3300020199Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300020580Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-MEnvironmentalOpen in IMG/M
3300020581Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-MEnvironmentalOpen in IMG/M
3300021086Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_1_08_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300021088Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-MEnvironmentalOpen in IMG/M
3300021170Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-MEnvironmentalOpen in IMG/M
3300021180Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-OEnvironmentalOpen in IMG/M
3300021433Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-OEnvironmentalOpen in IMG/M
3300021559Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-MEnvironmentalOpen in IMG/M
3300024288Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_08_16fungalEnvironmentalOpen in IMG/M
3300025922Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300026277Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_2_20cm (SPAdes)EnvironmentalOpen in IMG/M
3300026330Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133 (SPAdes)EnvironmentalOpen in IMG/M
3300026334Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141 (SPAdes)EnvironmentalOpen in IMG/M
3300026490Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DW-10-AEnvironmentalOpen in IMG/M
3300026524Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150 (SPAdes)EnvironmentalOpen in IMG/M
3300026529Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_152 (SPAdes)EnvironmentalOpen in IMG/M
3300026536Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147 (SPAdes)EnvironmentalOpen in IMG/M
3300027071Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM1H0_M2 (SPAdes)EnvironmentalOpen in IMG/M
3300027633Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA Ref_M1 (SPAdes)EnvironmentalOpen in IMG/M
3300027643Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3 (SPAdes)EnvironmentalOpen in IMG/M
3300027663Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA Ref_M3 (SPAdes)EnvironmentalOpen in IMG/M
3300027862Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300027875Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300027882Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300027903Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)EnvironmentalOpen in IMG/M
3300028536Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300028906Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)EnvironmentalOpen in IMG/M
3300031057Oak Coassembly Site 11 - Champenoux / Amance forestEnvironmentalOpen in IMG/M
3300031128Oak Summer Coassembly Site 11 - Champenoux / Amance forestEnvironmentalOpen in IMG/M
3300031718Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05EnvironmentalOpen in IMG/M
3300031962Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515EnvironmentalOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap


 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
JGI1027J11758_1189178923300000789SoilMKFRIWTTLFLVTIAQVAWGQTSTNPKLVNAEATSPEPSVNSYTVLGATSEQETLVRAQIRIMQPDVYPLRVLFVPHWKYVDTARTFRL
JGI12053J15887_1047087523300001661Forest SoilMKVRIWAVLLILGFAQFGWGQTNGNAKLVSEEATAPEPSANSYTVLGGTPQQEALVRAQIRIMQPVVYPLRVLFVPHWKYIDTTRIFRLKVPAGY
Ga0062389_10374585313300004092Bog Forest SoilMRLRISTVLFLVGIAQVGWGQINGNSNLISEETSGPNPSAISYTVLGATPQQEALVRVQIRVMQPEVLPLRIIFVPHWKYVDTA
Ga0066677_1005573113300005171SoilMRLRLWTTLFLVTIAQVAWGQTSTNPKLVNAEPTSPEPSVNSYVVIGATPEQETLVRAQIQVMQPAVYPLRVLFVPHWKYM
Ga0066679_1027023813300005176SoilMKLRIWTTLFLVTIAQVAWGQTSTNPKLVNAEPTSPEPSVNSYVVIGATPEQETLVRAQIQVMQPAVYPLRVLFVPHWKYM
Ga0066690_1007121923300005177SoilMRLRIWTTLFLATIAQVAWGQTSTNPKLVNAEVTSPEPSVNSYTVLGATSEQEALVRAQIRIMQPDV
Ga0066690_1076400113300005177SoilMKLRIWTTLFSLTLAQFAWGQTSGNSKLVNTEGTAPETSANGYTVIGATPKQEALVRAQIQVMQPDVYPLRVLFVPHWKY
Ga0066688_1003919933300005178SoilMKLRIWTTLFLVTTAQVAWGQTSTNPKLVNAEATSPGPSVNSYTVLGATSEQEALVRAQIRIMQPDVYPLRVLFVP
Ga0066688_1009596323300005178SoilMKLKIRMTLFLVTTAQFAWGQTGTKPKLVIAEATAPESSANSYSVLGATPEQETLVRAQIRVMQPSVYPLRVRFVPQWKYVGTARTFRLHVPA
Ga0066688_1049831613300005178SoilMRLRIWTTLFLATIAQVAWGQTSTNPKLVNAEVTSPEPSVNSYTVLGATSEQEALVRAQIRIMQPDVYPLRVLFVP
Ga0066676_1012055923300005186SoilMGLRIWTTVFSLTLAQLASGQTGGNPKLVNTETTPSEPSASGYAVMGATPGQEALVRAQIRIMQPEVYPLRVLFVPHWKY
Ga0066682_1076075623300005450SoilMRLRLWTTLFLVTIAQVAWGQTSTNPKLVNAEPTSPEPSVNSYVVIGATPEQETLVRAQIQVMQP
Ga0070707_10008388533300005468Corn, Switchgrass And Miscanthus RhizosphereMKLRLWTVLLLMGFAQIGWGQTNGNPKLVNAETTAAEPSSTSYTVLGATPQQEALVRAQIRVMQPDVYPL
Ga0066661_1047437723300005554SoilMRLRIWTTLFLVTVAQFAWGQTSGNSKLVNTEGTAPELSANSYAVLGASPEQEALVRAQIRIMQPDVYPLRVLFVRHWKYVDTARVL
Ga0066692_1049701913300005555SoilMRLRLWTTLFLVTIAQVAWGQTSTNPKLVNAEATSPEPSASGYSVIGATPEQEALVRAQIRTMQPDVYPLRV
Ga0066692_1077570713300005555SoilMRLRIWTILFLVTIAQFAWGQTSTNPKLVNAEATSSEPSVNSYTVLGATSEQETLVRSQIRIMQPDVYPLRVLFVPHWKYV
Ga0066707_1028308013300005556SoilMKLKMRMTLFLVTTAQFAWGQTGTKPKLVIAEATAPESSANSYSVLGATPEQETLVRAQIRVMQPSVYPLRVLFVPH
Ga0066707_1100807113300005556SoilMKLRIGTVLFLVTIAQVAWGQTSTNPKLVNAEATSPEPSVNSYTVLGATSEQETLVRSQIRIMQPDVYPLRVLFVPHWKYVDTARTF
Ga0066704_1063610723300005557SoilMKLKIWTTLFSLTLAQFAWGQASGNSKLVNTEGTAPEASATSYTVLGATSEQETLVRAQIRIMQPDVYPLRVLFVPHWK
Ga0066698_1015109223300005558SoilMRLRLWTTLFLVTIAQVAWGQTSTNPKLVNAEATEPSVNSYTVLGATFEQETLLRAQIRIMQPDVYPLRVLFVPH
Ga0066700_1003100933300005559SoilMKLRICTTLFSLTVAQLAWGQTNGKLVNTEGNAPEPSANSYTVIGATPKQEALVRAQIQVMQPDVYPLRVLFVPHWKY
Ga0066703_1055243513300005568SoilMKLRIWTTLFSLTLAQFAWGQTSGNSKLVNTEGTAPETSANGYTVIGATPKQEALVRAQIQVMQPDVYPLRVLF
Ga0066705_1016127523300005569SoilMKLRIWTTLFSLTVAQLAWGQTDGKLVNTEGTAPEPSANSYTVIGATPKQEALVRAQIQVMQPDVYPLRVLFVPHWKYMETARIFRLHV
Ga0066651_1022232323300006031SoilMRLRLWTTLFLVTIAQVAWGQTSTNPKLVNAEPTSPEPSVNSYVVIGATPEQETLVRAQIQVMQPAVYPLRVLFVPHWKY
Ga0075030_10147073913300006162WatershedsMKLRIWTTLFLVTIAQFAWGQTSGGTKLVSADASAPELTANSYAVLGATPEQEALVRAQIRIMQPDVYPLRVLFVPHWKYIYTART
Ga0079222_1021446623300006755Agricultural SoilMRLRIWTTLFSLTMAQFAWGQTNGKLVNTEGTAPETSANSYTIIGATAKQEALVRAQIQVLQPGWTARHPR*
Ga0066658_1043552223300006794SoilMKFRIWTTLFLVTVAQFAWGQTSGNSKLVNTEGTAPELSANSYAVLGASPEQEALVRAQIRIMQPDVYPLRVLFVRHWKYVDTARVLRLRVPAGYTS
Ga0066665_1023690713300006796SoilMRLRLWTTLFLVTIAQVAWGQTSTNPKLVNAEPTSPEPSVNSYVVIGATPEQETLVRAQIQVMQPAVYPLRVLFVPHWKYMDTARIFRLHVPAGYT
Ga0066659_1004800233300006797SoilMKLRIWTTLFLVTTAQVAWGQTSTNPKLVNAEATSPGPSVNSYTVLGATSEQEALVRAQIRIMQPDVYPLRVLFVPH
Ga0066659_1072673013300006797SoilMRLRIWTTLFLATIAQVAWGQTSTNPKLVNAEVTSPEPSVNSYTVLGATSEQEALVRAQIRIMQPDVYPLRVLFVPH
Ga0066659_1144346323300006797SoilMKFRIWTTLFLVTIAQVAWGQTSTNRKLVNAEATSPEPSVNSYTVLGATSEQETLLRAQIRIMQPDVYPLRVLFVRHWKYVDTARV
Ga0066660_1092509123300006800SoilMKLRIWTTLFSLTLAQFAWGQTSGNSKLVNTEGTAPETSANGYTVIGATPKQEALVRAQIQVMQPDVYPLRVLFVPHWKYMETARIFRLHVPAGYTS
Ga0073928_1067476723300006893Iron-Sulfur Acid SpringMRLRTWTILSLLSVPVAQFAWGRSSESAKLVSAEAHPPEPSANNYAVLGATPGQEALVRAQIQIMQP
Ga0099793_1001551523300007258Vadose Zone SoilMTIALVAWGQTSTNPKLVNTEATSPEPSVNSYTVLGATSEQETLVRDQIRIMQPDVYPLRVLFVSHW
Ga0099795_1015135313300007788Vadose Zone SoilMRLKIWTILFFVTSAQFAWGETSGSAKLTNAEATAPEPSASIYAVFGATAEQEALVRAQIRVMQPDVYPLRVLFVPHWKYIDAARAFHLYVPTGYTSKL
Ga0066710_10223964813300009012Grasslands SoilMRLRIWTTLFLATIAQVAWGQTSTNPKLVNAEVTSPEPSVNSYTVLGATSEQEALVRAQIRIMQPDVYPLRVLFVPHWKYVDT
Ga0099829_1005674713300009038Vadose Zone SoilMRLRIWTTLFLVTIAQFAWGQTSTNPKLVNAEATSPEPSANSYAVLGATPEQEALVRAQIRVMQPDVYPLRVLFVPHWK
Ga0099830_1008099913300009088Vadose Zone SoilMRLRIWTTLFLVTIAQFAWGQTSTNPKLVNAEATSPEPSANSYAVLGATPEQEALVRAQIRVMQPDVYPLRVLFVPHWKYIYTARTFRLHVPAGY
Ga0099830_1120041723300009088Vadose Zone SoilMRLRIWTTLFLVTSAQFAWGQTSGNAKLASTEATPPEPSANSYAVLGATPEQEALVRAQIQVMQPDVYPLRVLFVPHWKYIEAARTFHLHVP
Ga0099830_1172051813300009088Vadose Zone SoilMKFRIWTTLFLVTIAQVAWGQTSANPKLVNAEATLPEPSVNSYTVLGATSEQETLVRAQIRIMQP
Ga0099828_1006063313300009089Vadose Zone SoilMKFRIWTTLFLVTIAQVAWGQTSANPKLVNAEATLPEPSVNSYTVLGATSEQETLVRAQIRIMQPDVYPLRVLFV
Ga0099827_1118376313300009090Vadose Zone SoilMKLRLWTVLLLLGFAQVGWGQTNENPKLVNAEATAPEPSVNSYTVLGATSEQETLVRGQIRIMQPDVYPLRVLFVPHWKYVDTARTFRLH
Ga0066709_10088374413300009137Grasslands SoilMKLRIWTTLFSLTLAQFAWGQTSGNSKLVNTEGTAPETSANSYTVIGATPKQEALVRAQIQVMQPDVYPLRVLFV
Ga0134071_1054143123300010336Grasslands SoilMKLRIWTTLFLVTIAQFAWGQTSGSAKLVSAEATARELSANSYAVLGASPEQEALVRAQIRGMQPEVYPLRVLFV
Ga0137393_1005823313300011271Vadose Zone SoilMKLKIWTTLFLVTIPQLAWGQTSGNSKAINAEAAAPEPSANSYTVLGATPEQEALVRAQIRIMQPDVYPLRVLFVPHWKYVDTARIFRLH
Ga0137393_1014889713300011271Vadose Zone SoilMKLKIWTTLFLVTIPQLAWGQTNGNSKAINAEATAPEPSANSYTVLGATLEQEALVRAQIRIMQPDVYPLRVLFVPHWKYVDTARIFRLH
Ga0137393_1098275013300011271Vadose Zone SoilMRLRIWTTLFLVTIAQFAWGQTSTNPKLVNAEATSPEPSANSYAVLGATPEQEALVRAQIRVMQPDVYPLRVLFVPHWKYIYTARTFRLH
Ga0137389_1165862113300012096Vadose Zone SoilMKFRIWITLFFVTIAQVDWRQTSTNPKLVNAEATSPEPSVNSYTVLGATSEQETLVRAQIRIMQPDVYPLRVLF
Ga0137388_1011971213300012189Vadose Zone SoilMNFRIWTTLVLVTIAQVAWGQTSTNPKLVNAEATSPEPSVNSYTVLGATSEQETLVRAQIRIMQPDVYPLR
Ga0137388_1104278023300012189Vadose Zone SoilMRLRIWTTLFSVTLGQFAWGQTSGNAKLVSAEATAPEPSANSYNVLGATPEQDALVRAQIRVMQPDGYPLRVLFVPHW
Ga0137388_1108807623300012189Vadose Zone SoilMRFRIWTTLFLVTIAQFAGGQTSGVSAEATAPEPSANSYTVLRATPEQEALVRAQIRVMQPDVYPLRVLFVLHWKYVD
Ga0137388_1149975523300012189Vadose Zone SoilMKFRIWTTLFLVTIAQVAWGQTSTNPKLVNAEATSLEPSANRYTVLGATPEQETLVRAQIRIMQPDVYPLRVLFVPHWKYVDT
Ga0137388_1175352013300012189Vadose Zone SoilMRLRIWTTLFLVTPAQFAWGQTSGSARLASAEATAPEPSANTYAVLGATPEQEALVRAQIRVMQPDVYPLR
Ga0137383_1062092313300012199Vadose Zone SoilMKLKIRMTLFLVTTAQFAWGQTSTKPELVIAEATAPEPSANSYGVLGATPEQETLVRGQIRVMQPGVYPLRVLFVPHWKYI
Ga0137363_1022076613300012202Vadose Zone SoilMNFRIWTTLVLVTIAQVAWGQTSTNPKLVNAEATSPEPSVNSYTVLGATSEQETLVRAQIRIMQPDVYPL
Ga0137399_1108987423300012203Vadose Zone SoilMRLRLWTTLFLVTIAQVAWGQTSTNPKLVNAEATSPEPSASGYSVIGATPEQEALVRAQIRTMQPDVNPLRVLFVPHWKYMDTARTFHLHV
Ga0137381_1034230913300012207Vadose Zone SoilMGLRIWTTVFSLTLAQLASGQTGGNPKLVNTEATPSEPSASGYAVMGATPGQEALVRAQIRIMQPEVYPLRVLFVPHWKYIET
Ga0137378_1059807013300012210Vadose Zone SoilMKLKIWTTLFSLTLAQFAWGQTSGNSKLVNTEGTAPEASATSYTVLGATSEQETLVRAQIRIMQPDVYPLRVLFVPHWKYV
Ga0137387_1105237423300012349Vadose Zone SoilMRLRLWTTLFLVTIAQVAWGQTSTNPKLVNAEATSPEPSASGYSVIGATPEQEALVRAQIRTMQPDVYPLRVFFVPHWKYIDTARTFHLHVPAGYTS
Ga0137386_1038475913300012351Vadose Zone SoilMRLRIWTTLFLVPIAQFAWGQTSGGSKLVSEEATTPEPSANSYAVLGASPEQEALVRAQIRIMQPDVYPLRVLFVPRWKYMDTARTF
Ga0137384_1045740423300012357Vadose Zone SoilMRLRIWTTLFLVPIAQFAWGQTSGGSKLVSEEATTPEPSANSYAVLGASPEQEALVRAQIRVMQPTVLPLRILFVPHWKYIDTARIFHLHVPAGYTS
Ga0137385_1060096213300012359Vadose Zone SoilMGLRIWTTVFSLTLAQLASGQTGGNPKLVNTEATPSEPSASGYAVMGATPGQEALVRAQI
Ga0137360_1000601023300012361Vadose Zone SoilMKLKIWTTLFLVTLAQFVWGQTNGNAKLVSEEATAVEPSANSYTVLGATAEQEALVRSQIRVMQPDVYPLRVLFVPHWKYIDTARIFRLHVPA*
Ga0137360_1052735423300012361Vadose Zone SoilMRLTIWTTLFLMTIAQVASGQTSTNPKLVNAEATSPEPSVNNYTVLGATSEQEALVRAQIRVMQPDV
Ga0137360_1073574423300012361Vadose Zone SoilMKLRIWTVLLILGFAQFGSGQTNGKARVVSEDAAAPKPSANSYTVLGATSEQETLVRAQIRIMQPDVYPLRVLFVPHWKYIDTARTFHLHVPAG
Ga0137361_10000055123300012362Vadose Zone SoilMGLRIWITAFSLTLAQFAWGQTSSSAKLVSTEATVAEPSPSSYTVIGATPKQEALVRAQIQVMQPEVYPLRVLFVPHWKYVDTARTF*
Ga0137361_1023785323300012362Vadose Zone SoilMRLKNWTTLFLMTIAQVAWGQTSTNPKLVNAEAAAPEPSASGYAVIGATPEQEALVRAQIRVMQSAVYPLRVLFVPH*
Ga0137390_1197235513300012363Vadose Zone SoilMRLRIWTTLFLVTSAQFAWGQTSGNAKLASAEATPPEPSTNSYAVLGATPEQEALVRAQIRVMQPDVYPLRVL
Ga0137398_1002791833300012683Vadose Zone SoilMRLRIWTILFLVTIAQFAWGQTSTNPKLVNAEATSSEPSVNSYTVLGATSEQETLVRSQIRIMQPDVYPLRVLFVPHWKYVDTARTFRLHVPAGYT
Ga0137397_1068075513300012685Vadose Zone SoilMKLKIGITLFLVTMPQFAWGQTSTNPKLVNAEATALEPSANRYTILGATPEQEALVRTQIRVMQPGVYPLRVLFVPHWKYLDTARTFRLH
Ga0137395_1067358923300012917Vadose Zone SoilMKLRIGTVLFLVTIAQVAWGQTSTNPKLVNAEATSPEPSVNSYAVLGATSEQETLVRAQIRIMQPDVYPLRVLFVPHWKYVD
Ga0137396_1078639713300012918Vadose Zone SoilMKLRNRTVLLLLGFAQIGWGQTNGNPKLVSAEATAPEPSANSYNVLGATPEQDVLVRAQIRVMQPDVYPLRVLFVPHWKYIDT
Ga0137394_1062759513300012922Vadose Zone SoilMTIAQVGWGQTSGDPKLVNTEAAAPEPSANSYTVIGATPEQEALVRAQIRTMQPEVYPLRVLLVPHWKYMDTARTFRLHVPAGYTSAMFT
Ga0137416_1017142523300012927Vadose Zone SoilMRLRLWTTLFLVTIAQVAWGQRSTNPKLVNAEATSSEPSASGYSVIGATPEQEALVRAQIRTMQPDVYPLRVLFVPHWKYIDTARTFHLHVP
Ga0137404_1202698913300012929Vadose Zone SoilMGLRIWTTVFSLTLAQLASGQTGANPKLVNTEATPSEPSASGYAVMGATPGQEALVRAQIRIMQPEVYPLRVLFVPHWKYI
Ga0137407_1034064123300012930Vadose Zone SoilMKLRIGTVLFLVTIAQVAWGQTSTNPKLVNAEATSPEPSVNSYTVLGATSEQETLVRAQIRIMQPDVY
Ga0137407_1126696213300012930Vadose Zone SoilMRLKIWTILFLVTSAQFAWGQTDVKAKLASAEATPPEPSANIYAGLQATSEQETLVRAQIRVMQPDVYPLRVLFLPH
Ga0137410_1053433623300012944Vadose Zone SoilMKLKIWTTLFSLTLAQFAWGQTSGNSKLVNTEGTAPEAYATSFTVLGATSEQEALVRAQIRIMQPDV
Ga0137405_105205413300015053Vadose Zone SoilMKFRIWTTLFLVTIAQVAWGQTSTNPKLVNAEVTSPEPSVNSYTVLGATPQQEALVRAQIRTMQPDVYPLRVLFVPHWK
Ga0137403_1124521713300015264Vadose Zone SoilMRLRIWTTLFLVTLGQFAWAQTSGNAKLVSAEATAPEPSANSYNVLGATPEQDVLVRAQIRVMQPDVYPLRVLFVPH
Ga0066669_1004796813300018482Grasslands SoilMKLRIWTTLFSLTVAQLAWGQTDGKLVNTEGTAPEPSANSYTVIGATPKQEALVRAQIQVMQPDVYPLRVLF
Ga0179592_1052097213300020199Vadose Zone SoilMRLRIWTTLFLVTLGQFAWAQTSGNAKLVSAEATAPEPSANSYNVLGATPEQDALVRAQIRVMQPDVYPLRVLFVPHWKYIDTARTFHLHVPT
Ga0210403_1054869323300020580SoilMGLRIWTTLFLVTIAQFAWGQTSGKAKLVSAEATAPEPSANSYTVLGATPEQEALVRAQIRVMQPDVYPLRVLFVPH
Ga0210399_1004493333300020581SoilMGLRIWTTLFLVTIAQFAWGQTSGKAKLVSAEATAPEPSANSYTVLGATPEQEALVRAQIRVMQPDVYPLRVLFVPHWKYIDTART
Ga0179596_1029351523300021086Vadose Zone SoilMKLRIGTVLFLVTIAQVAWGQTSTNPKLVNAEATSPEPSVNSYTVLGATSEQETLVRAQIRIMQPDVYPLRVLFVPHWKYVDTARTFR
Ga0210404_1025429813300021088SoilMRLRIWTTLLVTSAQFAWGQTGGGAKLASAEATAPEPPANSYAVLGATPEQEALVRAQIELMRPDVYPLRVLF
Ga0210400_1102155313300021170SoilMRLRSWPILFLVTIAQFAWGQTRGSAKLATAEATAPEPSADSYAVLGATPEQEALVRAQIRVMQPDVYPL
Ga0210396_1091992123300021180SoilMKLRTWIVLLLLGFAQFGWGQTNRNSRLVSEEATVARISANSYTVLGATPGQEALVRNQIRVMQPAVHPLRVLFVPHWKYIDTART
Ga0210391_1048658323300021433SoilMKLRISTVLLLLGFAQFGWGQTNGDSKLVSAEATASEPPANTYTVLGATPKQEAVVRTQIRVMQPDVYPLRVLFVPHWKYVDTARTFRLH
Ga0210409_1080901213300021559SoilMKPKIWMTLFLVTTAQFAWGQSSAKPRLVSAEATAPEPSANSYTVLGATPEQETLVRAQIRVMHPDVYPLRVLFVPHWKYIDTARTFRLHVP
Ga0179589_1026651423300024288Vadose Zone SoilMRLKIWTTLFLVTSAQVAWGQASRTSKLARAVATAAEPSANIYAVLGATSEQESLVRAQIRVMQPDVYPLRVL
Ga0207646_1137993413300025922Corn, Switchgrass And Miscanthus RhizosphereMKRVICTALFVLGFAQLGWGQTNGDANLVSAEATAPELSANSYAVLGATPEQDALVRAQIRVMQPEVLPLRILFVPHWK
Ga0209350_100703113300026277Grasslands SoilMRLRLWTTLFLVTIAQVAWGQTSTNPKLVNAEPTSPEPSVNSYVVIGATPEQETLVRAQIQVMQPAVYPLRVLFVPHWKYMDTARIFRL
Ga0209473_109363113300026330SoilMRLRLWTTLFLVTIAQVAWGQTSTNPKLVNAEPTSPEPSVNSYVVIGATPEQETLVRAQIQVMQPAVYPLRVLFVPHW
Ga0209377_118990823300026334SoilMRLRLWTTLFLVTIAQVAWGQTSTNPKLVNAEATSPEPSASGYSVIGATPEQEALVRAQIRTMQPDVYPLRVLFVPHWKYIDTARTFHLHVPAGYT
Ga0257153_102903223300026490SoilMNFRIWTTLVLVTIAQVAWGQTSTNPKLVNAEATSPEPSVNSYTVLGATSEQETLVRAQIRIMQPDVYPLRVLFVPHWKYVDTARTFRLHVPSG
Ga0209690_120995413300026524SoilMKLRIGTVLLLVTIVQFAWGQTSTNPKLVNAEATSPEPSVNSYVVIGATPSQDSSLRTQIQVMQPRVLPLRI
Ga0209806_100896813300026529SoilMKLRIWTTLFLVTTAQVAWGQTSTNPKLVNAEATSPGPSVNSYTVLGATSEQEALVRAQIRIMQPDVYP
Ga0209806_117476623300026529SoilMRLRIWTTLFLATIAQVAWGQTSTNPKLVNAEVTSPEPSVNSYTVLGATSEQEALVRAQIRIMQPDVYP
Ga0209058_116947613300026536SoilMRLRLWTTLFLVTIAQVAWGQTSTNPKLVNAEPTSPEPSVNSYVVIGATPEQETLVRAQIQVM
Ga0209214_101715723300027071Forest SoilMRLRIWTTLFLATLAQFAWGQTSGNLASAEATAPEPSANSYTVLGATPEQEALVRAQIRVMQPDVYPLRVLF
Ga0208988_114387323300027633Forest SoilMKVRIWAVLLILGFAQFGWGQTNGNAKLVSEEATAPEPSANSYTVLGGTPQQEALVRAQIRIMQPVVYPLRVLFVPHWKYI
Ga0209076_101460923300027643Vadose Zone SoilMKLRNRTVLLLLGFAQIGWGQTNGNPKLVSAEATAPEPSANSYNVLGATPEQDVLVRAQIRVMQPDVYPL
Ga0208990_109183723300027663Forest SoilMRLRIWTTVFSLTLTQFAWGQTSGKAKLASAEATAPEPSANIYAVLGATSEQESLVRAQIRVMQPDVYPLRVLFVPHWKYVDAA
Ga0209701_1011450013300027862Vadose Zone SoilMTIAQVAWGQTSTNPKLVNAEATAPGPSVNSYTVLGATPEQEALVRAQVRIMQPDVYPLRVL
Ga0209283_1011014723300027875Vadose Zone SoilMRLRSWTTLFLMTLAQVAWGQTTTNPKLVNAEATAPGPSVNSYTVLGATPEQEALVRAQVRIMQPDVYPLRVLFVPHWKYVD
Ga0209283_1056911123300027875Vadose Zone SoilMRLRIWTTLFLVTIAQVAWGQTSGSAKLVSAEATAPELSANSYAVLGATPEQEALVRAQIRVMQPDVYPLRVLFVPHWKYIDTTRTFRLHVP
Ga0209590_1054938313300027882Vadose Zone SoilMKLRIGTVLFLVTIAQVAWGQTSTNPKLVNAEATSPEPSVNSYTVLGATSEQETLVRAQIRIMQPDVYPLRVL
Ga0209488_1035586513300027903Vadose Zone SoilVRLRIWTTLFFLTIAPFAWGQTGENAKLVSPAATAPEHSLSSYAVLGATPEQEALVRAQIRVMVPDVYPLRVLFVSHLKYLDATRAFRLHV
Ga0209488_1082282213300027903Vadose Zone SoilMRFRIWTTLFLVTIAQFAWAQASGKAKLVSAEATTPEPSANSYTVLGATPEQEALVRAQIRLMQPDVYPLRVLF
Ga0137415_1008304143300028536Vadose Zone SoilMKFRIWTTLFLVTMAQVARGQTSTNPKLVNAEATSPEPSVNSYTVLGATSEQETLVRAQIRIMQPDVYPLRVLFVPHWK
Ga0308309_1059820723300028906SoilMKLRIWTTLFLVTIAQFAWGQTSGSTKLVCAEATAPEPSANKYTVLGATAEQEALVRAQIQVMQPEVLPLRIMFVPHWKYIDTTKMFHLHVPAGY
Ga0170834_10604066723300031057Forest SoilMKFRIWTTLFLVTIAQVAWGQTSTNPKLANAEATSPEPSVNSYTILGATVEQEALVRAQIRIMQPDVYPLRVLFVPHWKYVDATKAFRLHVPAGYTS
Ga0170823_1570958613300031128Forest SoilMKFRIWTTLFLVTIAQVAWGQTSTNPKLANAEATSPEPSVNSYTILGATVEQEALVRAQIRIMQPDVYPLRVLFVPHWKYIETARIFRLHVPA
Ga0307474_1041880313300031718Hardwood Forest SoilMKLRIWTTLFLVTSAQFAWGQTSGSVQVVSAEATAPEPSPNSYTVLGATPQQEALVRAQIRVMQPTVLPLRILLVPHWKYVDTAKTFRLHVPAG
Ga0307479_1143107613300031962Hardwood Forest SoilMRLRIWTALFLLGTAQVSWGQTSGSSMLVNAEATAPIPSANNYTVLGATPDQEALVRGQIRVMQPEVYPLRVLFVPHWKYIDTTR

 ⦗Top⦘


Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.