NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome Family F078534

Metagenome Family F078534

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F078534
Family Type Metagenome
Number of Sequences 116
Average Sequence Length 55 residues
Representative Sequence MKKGHHMSMSRKLEIVRTVLNKSKGVTMLHGDKLVQHVASSITLYEKYIPDEKNTKEV
Number of Associated Samples 45
Number of Associated Scaffolds 116

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 29.31 %
% of genes near scaffold ends (potentially truncated) 16.38 %
% of genes from short scaffolds (< 2000 bps) 77.59 %
Associated GOLD sequencing projects 29
AlphaFold2 3D model prediction Yes
3D model pTM-score0.55

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Unclassified (56.034 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Environmental → Aquatic → Marine → Coastal → Unclassified → Aqueous
(74.138 % of family members)
Environment Ontology (ENVO) Unclassified
(77.586 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Saline → Water (saline)
(91.379 % of family members)



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Multiple Sequence Alignments

Select alignment to view:      


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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 29.07%    β-sheet: 2.33%    Coil/Unstructured: 68.60%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.55
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 116 Family Scaffolds
PF03073TspO_MBR 16.38
PF00037Fer4 9.48
PF03567Sulfotransfer_2 6.90
PF07484Collar 3.45
PF02511Thy1 2.59
PF00722Glyco_hydro_16 2.59
PF01755Glyco_transf_25 1.72
PF13472Lipase_GDSL_2 1.72
PF00856SET 1.72
PF01223Endonuclease_NS 0.86
PF00291PALP 0.86
PF06508QueC 0.86
PF01242PTPS 0.86
PF14602Hexapep_2 0.86
PF02195ParBc 0.86
PF02543Carbam_trans_N 0.86
PF137592OG-FeII_Oxy_5 0.86

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 116 Family Scaffolds
COG3476Tryptophan-rich sensory protein TspO/CrtK (mitochondrial benzodiazepine receptor homolog)Signal transduction mechanisms [T] 16.38
COG1351Thymidylate synthase ThyX, FAD-dependent familyNucleotide transport and metabolism [F] 2.59
COG2273Beta-glucanase, GH16 familyCarbohydrate transport and metabolism [G] 2.59
COG3306Glycosyltransferase involved in LPS biosynthesis, GR25 familyCell wall/membrane/envelope biogenesis [M] 1.72
COG0037tRNA(Ile)-lysidine synthase TilS/MesJTranslation, ribosomal structure and biogenesis [J] 0.86
COG0137Argininosuccinate synthaseAmino acid transport and metabolism [E] 0.86
COG0171NH3-dependent NAD+ synthetaseCoenzyme transport and metabolism [H] 0.86
COG0301Adenylyl- and sulfurtransferase ThiI (thiamine and tRNA 4-thiouridine biosynthesis)Translation, ribosomal structure and biogenesis [J] 0.86
COG0482tRNA U34 2-thiouridine synthase MnmA/TrmU, contains the PP-loop ATPase domainTranslation, ribosomal structure and biogenesis [J] 0.86
COG0519GMP synthase, PP-ATPase domain/subunitNucleotide transport and metabolism [F] 0.86
COG06037-cyano-7-deazaguanine synthase (queuosine biosynthesis)Translation, ribosomal structure and biogenesis [J] 0.86
COG07206-pyruvoyl-tetrahydropterin synthaseCoenzyme transport and metabolism [H] 0.86
COG0780NADPH-dependent 7-cyano-7-deazaguanine reductase QueF, C-terminal domain, T-fold superfamilyTranslation, ribosomal structure and biogenesis [J] 0.86
COG1606ATP-utilizing enzyme, PP-loop superfamilyGeneral function prediction only [R] 0.86
COG1864DNA/RNA endonuclease G, NUC1Nucleotide transport and metabolism [F] 0.86
COG2192Predicted carbamoyl transferase, NodU familyGeneral function prediction only [R] 0.86


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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
UnclassifiedrootN/A56.03 %
All OrganismsrootAll Organisms43.97 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300001950|GOS2227_1035985All Organisms → Viruses → Predicted Viral1293Open in IMG/M
3300005941|Ga0070743_10005131Not Available4720Open in IMG/M
3300006790|Ga0098074_1070968Not Available950Open in IMG/M
3300006802|Ga0070749_10002010All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes13759Open in IMG/M
3300006802|Ga0070749_10017696Not Available4540Open in IMG/M
3300006802|Ga0070749_10025155All Organisms → cellular organisms → Bacteria3745Open in IMG/M
3300006802|Ga0070749_10049825All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → unclassified Acidimicrobiia → Acidimicrobiia bacterium2552Open in IMG/M
3300006802|Ga0070749_10085566All Organisms → Viruses → Predicted Viral1878Open in IMG/M
3300006802|Ga0070749_10115227All Organisms → cellular organisms → Bacteria1581Open in IMG/M
3300006802|Ga0070749_10139791Not Available1414Open in IMG/M
3300006802|Ga0070749_10165625All Organisms → Viruses → Predicted Viral1279Open in IMG/M
3300006802|Ga0070749_10296348All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Woesearchaeota → Candidatus Woesearchaeota archaeon907Open in IMG/M
3300006802|Ga0070749_10316620Not Available872Open in IMG/M
3300006802|Ga0070749_10422076Not Available734Open in IMG/M
3300006802|Ga0070749_10541068Not Available632Open in IMG/M
3300006802|Ga0070749_10557204Not Available621Open in IMG/M
3300006810|Ga0070754_10531062Not Available504Open in IMG/M
3300006869|Ga0075477_10392564Not Available541Open in IMG/M
3300006874|Ga0075475_10257825Not Available730Open in IMG/M
3300006919|Ga0070746_10086342All Organisms → Viruses → Predicted Viral1581Open in IMG/M
3300006919|Ga0070746_10357919All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Pacearchaeota → Candidatus Pacearchaeota archaeon660Open in IMG/M
3300006919|Ga0070746_10523186Not Available518Open in IMG/M
3300007344|Ga0070745_1016404All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage3369Open in IMG/M
3300007344|Ga0070745_1056979All Organisms → cellular organisms → Bacteria1594Open in IMG/M
3300007344|Ga0070745_1213817Not Available708Open in IMG/M
3300007344|Ga0070745_1276620Not Available602Open in IMG/M
3300007344|Ga0070745_1293075All Organisms → cellular organisms → Bacteria581Open in IMG/M
3300007346|Ga0070753_1056775All Organisms → cellular organisms → Bacteria1595Open in IMG/M
3300007538|Ga0099851_1019372Not Available2751Open in IMG/M
3300007538|Ga0099851_1046671All Organisms → Viruses → Predicted Viral1706Open in IMG/M
3300007538|Ga0099851_1060920Not Available1473Open in IMG/M
3300007538|Ga0099851_1174895All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon791Open in IMG/M
3300007538|Ga0099851_1226245Not Available675Open in IMG/M
3300007541|Ga0099848_1017825Not Available3057Open in IMG/M
3300007541|Ga0099848_1022594All Organisms → cellular organisms → Bacteria2673Open in IMG/M
3300007541|Ga0099848_1041117All Organisms → cellular organisms → Bacteria1891Open in IMG/M
3300007541|Ga0099848_1086237All Organisms → cellular organisms → Bacteria1218Open in IMG/M
3300007541|Ga0099848_1093878Not Available1157Open in IMG/M
3300007541|Ga0099848_1101938All Organisms → cellular organisms → Bacteria1100Open in IMG/M
3300007541|Ga0099848_1109783All Organisms → Viruses → Predicted Viral1052Open in IMG/M
3300007541|Ga0099848_1110262All Organisms → Viruses → Predicted Viral1049Open in IMG/M
3300007541|Ga0099848_1139135Not Available905Open in IMG/M
3300007542|Ga0099846_1104270Not Available1042Open in IMG/M
3300007542|Ga0099846_1139877All Organisms → cellular organisms → Bacteria875Open in IMG/M
3300007542|Ga0099846_1199744Not Available706Open in IMG/M
3300007553|Ga0102819_1060753Not Available637Open in IMG/M
3300007640|Ga0070751_1218571Not Available734Open in IMG/M
3300007640|Ga0070751_1263341Not Available651Open in IMG/M
3300007960|Ga0099850_1321814Not Available583Open in IMG/M
3300009149|Ga0114918_10699006Not Available531Open in IMG/M
3300009480|Ga0127405_1013803Not Available2168Open in IMG/M
3300010354|Ga0129333_11528434Not Available546Open in IMG/M
3300010412|Ga0136852_10720077Not Available957Open in IMG/M
3300013941|Ga0117792_1025074All Organisms → Viruses672Open in IMG/M
3300021960|Ga0222715_10019666Not Available5084Open in IMG/M
3300021960|Ga0222715_10020634All Organisms → Viruses → Predicted Viral4930Open in IMG/M
3300021960|Ga0222715_10021046Not Available4876Open in IMG/M
3300021960|Ga0222715_10165590All Organisms → Viruses → Predicted Viral1356Open in IMG/M
3300021960|Ga0222715_10356418Not Available813Open in IMG/M
3300021960|Ga0222715_10621585Not Available554Open in IMG/M
3300021961|Ga0222714_10001427Not Available26892Open in IMG/M
3300021961|Ga0222714_10016680All Organisms → cellular organisms → Archaea → DPANN group → Candidatus Woesearchaeota → Candidatus Woesearchaeota archaeon5921Open in IMG/M
3300021961|Ga0222714_10062818Not Available2500Open in IMG/M
3300021961|Ga0222714_10271542All Organisms → cellular organisms → Bacteria942Open in IMG/M
3300021961|Ga0222714_10281062Not Available920Open in IMG/M
3300021961|Ga0222714_10507733Not Available617Open in IMG/M
3300021961|Ga0222714_10631431Not Available531Open in IMG/M
3300021961|Ga0222714_10659576Not Available515Open in IMG/M
3300021962|Ga0222713_10342446Not Available938Open in IMG/M
3300022053|Ga0212030_1021644Not Available869Open in IMG/M
3300022063|Ga0212029_1003537Not Available1618Open in IMG/M
3300022063|Ga0212029_1012787All Organisms → cellular organisms → Bacteria1058Open in IMG/M
3300022063|Ga0212029_1025809Not Available808Open in IMG/M
3300022063|Ga0212029_1035499Not Available707Open in IMG/M
3300022063|Ga0212029_1069822Not Available516Open in IMG/M
3300022167|Ga0212020_1081720All Organisms → cellular organisms → Bacteria542Open in IMG/M
3300022176|Ga0212031_1000089Not Available4754Open in IMG/M
3300022176|Ga0212031_1029322All Organisms → cellular organisms → Bacteria887Open in IMG/M
3300022176|Ga0212031_1082971Not Available546Open in IMG/M
3300022198|Ga0196905_1001581All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes8686Open in IMG/M
3300022198|Ga0196905_1073576All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon938Open in IMG/M
3300022198|Ga0196905_1134494All Organisms → cellular organisms → Bacteria642Open in IMG/M
3300022198|Ga0196905_1165543Not Available564Open in IMG/M
3300022200|Ga0196901_1104357Not Available985Open in IMG/M
3300024262|Ga0210003_1257804Not Available685Open in IMG/M
3300024346|Ga0244775_10000118Not Available101608Open in IMG/M
3300025543|Ga0208303_1041610Not Available1161Open in IMG/M
3300025543|Ga0208303_1097187Not Available628Open in IMG/M
3300025646|Ga0208161_1003848All Organisms → cellular organisms → Bacteria7194Open in IMG/M
3300025646|Ga0208161_1017733All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes2741Open in IMG/M
3300025646|Ga0208161_1034114All Organisms → Viruses → Predicted Viral1763Open in IMG/M
3300025646|Ga0208161_1054574Not Available1259Open in IMG/M
3300025646|Ga0208161_1133287All Organisms → cellular organisms → Bacteria641Open in IMG/M
3300025646|Ga0208161_1153322Not Available572Open in IMG/M
3300025646|Ga0208161_1153551Not Available572Open in IMG/M
3300025646|Ga0208161_1158410Not Available557Open in IMG/M
3300025647|Ga0208160_1022526Not Available1978Open in IMG/M
3300025655|Ga0208795_1060223All Organisms → Viruses → Predicted Viral1098Open in IMG/M
3300025655|Ga0208795_1159921Not Available555Open in IMG/M
3300025671|Ga0208898_1058167All Organisms → Viruses → Predicted Viral1357Open in IMG/M
3300025671|Ga0208898_1105622All Organisms → cellular organisms → Bacteria845Open in IMG/M
3300025687|Ga0208019_1025912All Organisms → cellular organisms → Bacteria2237Open in IMG/M
3300025687|Ga0208019_1119490All Organisms → cellular organisms → Bacteria782Open in IMG/M
3300025769|Ga0208767_1266852Not Available523Open in IMG/M
3300025889|Ga0208644_1028732All Organisms → cellular organisms → Bacteria3364Open in IMG/M
3300025889|Ga0208644_1044909All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → unclassified Acidimicrobiia → Acidimicrobiia bacterium2501Open in IMG/M
3300025889|Ga0208644_1057454All Organisms → Viruses → Predicted Viral2115Open in IMG/M
3300025889|Ga0208644_1092907All Organisms → cellular organisms → Bacteria1507Open in IMG/M
3300025889|Ga0208644_1103542All Organisms → cellular organisms → Bacteria1395Open in IMG/M
3300025889|Ga0208644_1321495Not Available604Open in IMG/M
3300027917|Ga0209536_100533795All Organisms → Viruses → Predicted Viral1463Open in IMG/M
3300029753|Ga0135224_1007681All Organisms → cellular organisms → Bacteria819Open in IMG/M
3300031669|Ga0307375_10392728Not Available863Open in IMG/M
3300031669|Ga0307375_10561795All Organisms → cellular organisms → Bacteria678Open in IMG/M
3300034374|Ga0348335_149378Not Available642Open in IMG/M
3300034418|Ga0348337_036138Not Available2185Open in IMG/M



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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
AqueousEnvironmental → Aquatic → Marine → Coastal → Unclassified → Aqueous74.14%
Estuarine WaterEnvironmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine Water12.93%
Deep SubsurfaceEnvironmental → Aquatic → Marine → Oceanic → Sediment → Deep Subsurface1.72%
EstuarineEnvironmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine1.72%
SoilEnvironmental → Terrestrial → Soil → Clay → Unclassified → Soil1.72%
MarineEnvironmental → Aquatic → Marine → Oceanic → Unclassified → Marine0.86%
Marine SedimentEnvironmental → Aquatic → Marine → Oceanic → Sediment → Marine Sediment0.86%
Freshwater To Marine Saline GradientEnvironmental → Aquatic → Marine → Coastal → Unclassified → Freshwater To Marine Saline Gradient0.86%
MarineEnvironmental → Aquatic → Marine → Intertidal Zone → Unclassified → Marine0.86%
EstuarineEnvironmental → Aquatic → Marine → Intertidal Zone → Estuary → Estuarine0.86%
Marine HarborEnvironmental → Aquatic → Marine → Harbor → Unclassified → Marine Harbor0.86%
Mangrove SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Mangrove Sediment0.86%
Meromictic PondEnvironmental → Aquatic → Unclassified → Unclassified → Unclassified → Meromictic Pond0.86%
Epidermal MucusHost-Associated → Fish → Skin → Epidermal Mucus → Unclassified → Epidermal Mucus0.86%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300001950Marine microbial communities from Delaware Bay, New Jersey, USA - GS011EnvironmentalOpen in IMG/M
3300005941Estuarine microbial communities from the Columbia River estuary, USA - metaG S.697EnvironmentalOpen in IMG/M
3300006790Marine viral communities from the Gulf of Mexico - 32_GoM_OMZ_CsCl metaGEnvironmentalOpen in IMG/M
3300006802Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_18EnvironmentalOpen in IMG/M
3300006810Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Sep_01EnvironmentalOpen in IMG/M
3300006869Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_22_N_>0.8_DNAEnvironmentalOpen in IMG/M
3300006874Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_22_D_>0.8_DNAEnvironmentalOpen in IMG/M
3300006919Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_21EnvironmentalOpen in IMG/M
3300007344Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_4EnvironmentalOpen in IMG/M
3300007346Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Aug_31EnvironmentalOpen in IMG/M
3300007538Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_2 Viral MetaGEnvironmentalOpen in IMG/M
3300007541Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_1S Viral MetaGEnvironmentalOpen in IMG/M
3300007542Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1504_1 Viral MetaGEnvironmentalOpen in IMG/M
3300007553Estuarine microbial communities from the Columbia River estuary - Ebb tide non-ETM metaG S.689EnvironmentalOpen in IMG/M
3300007640Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Aug_28EnvironmentalOpen in IMG/M
3300007960Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_1D Viral MetaGEnvironmentalOpen in IMG/M
3300009149Deep subsurface microbial communities from Baltic Sea to uncover new lineages of life (NeLLi) - Landsort_02402 metaGEnvironmentalOpen in IMG/M
3300009480Aquatic microbial communities from different depth of meromictic Siders Pond, Falmouth, Massachusetts; Cast 1, 10m depth; DNA IDBA-UDEnvironmentalOpen in IMG/M
3300010354Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_0.6_0.8_DNAEnvironmentalOpen in IMG/M
3300010412Mangrove sediment microbial communities from Mai Po Nature Reserve Marshes in Hong Kong, China - Maipo_10EnvironmentalOpen in IMG/M
3300013941Epidermal mucus viral and microbial communities from European eel in Spain - water from Alfacada pond (Ebro delta)Host-AssociatedOpen in IMG/M
3300021960Estuarine water microbial communities from San Francisco Bay, California, United States - C33_9DEnvironmentalOpen in IMG/M
3300021961Estuarine water microbial communities from San Francisco Bay, California, United States - C33_3DEnvironmentalOpen in IMG/M
3300021962Estuarine water microbial communities from San Francisco Bay, California, United States - C33_649DEnvironmentalOpen in IMG/M
3300022053Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1504_2 Viral MetaG (v2)EnvironmentalOpen in IMG/M
3300022063Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1504_1 Viral MetaG (v2)EnvironmentalOpen in IMG/M
3300022167Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_4 (v2)EnvironmentalOpen in IMG/M
3300022176Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_1S Viral MetaG (v2)EnvironmentalOpen in IMG/M
3300022198Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_1S Viral MetaG (v3)EnvironmentalOpen in IMG/M
3300022200Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1504_1 Viral MetaG (v3)EnvironmentalOpen in IMG/M
3300024262Deep subsurface microbial communities from Baltic Sea to uncover new lineages of life (NeLLi) - Landsort_02402 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300024346Whole water sample coassemblyEnvironmentalOpen in IMG/M
3300025543Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1504_2 Viral MetaG (SPAdes)EnvironmentalOpen in IMG/M
3300025646Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_1S Viral MetaG (SPAdes)EnvironmentalOpen in IMG/M
3300025647Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1504_1 Viral MetaG (SPAdes)EnvironmentalOpen in IMG/M
3300025655Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_2 Viral MetaG (SPAdes)EnvironmentalOpen in IMG/M
3300025671Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_4 (SPAdes)EnvironmentalOpen in IMG/M
3300025687Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_1D Viral MetaG (SPAdes)EnvironmentalOpen in IMG/M
3300025769Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_21 (SPAdes)EnvironmentalOpen in IMG/M
3300025889Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_18 (SPAdes)EnvironmentalOpen in IMG/M
3300027917Marine sediment microbial communities from White Oak River estuary, North Carolina - WOR-2-8_12 (SPAdes)EnvironmentalOpen in IMG/M
3300029753Marine harbor viral communities from the Indian Ocean - SRH3EnvironmentalOpen in IMG/M
3300031669Soil microbial communities from Risofladan, Vaasa, Finland - TR-1EnvironmentalOpen in IMG/M
3300034374Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Aug_31 (v4)EnvironmentalOpen in IMG/M
3300034418Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Aug_28 (v4)EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
GOS2227_103598523300001950MarineMKKNGHAMSMSRKLDIVRIVLNKSKGLSMLHGEKLVNHVANSITLYEKRQEEKK*
Ga0070743_10005131123300005941EstuarineVKRGHHMSRDRKVEIVRTVLGRAKGLTMLHGEKLVQHVANSITLYEKHIPEND*
Ga0098074_107096833300006790MarineMKKHGPEMSMSRKLEIVRIILSKSKGLTMLHGENLVNHVARSVKIYELPTKEEE*
Ga0070749_1000201083300006802AqueousMKKGHHMSMSRKLDIVRTVLNKSKGLTMLHGEKLVHHVASSITLYEAYISDDSENKNPHKE*
Ga0070749_10017696113300006802AqueousMKRGHKMGMRRKLEIVRAVLNKSKGVTMLHGDKLIQHVANSITLYEKYNSNEETTKEVGSL*
Ga0070749_1002515583300006802AqueousMKKGHHMSMSRKLEIVRTVLNKSKGVTMLHGDKLIQHVASSITLYEKYIPNEKSIKEV*
Ga0070749_1004982543300006802AqueousMSMNRKLEIVRKVLNKSKGVTMLHGDKLIQHVANSITLYEKYIPDEKDTKEVGSL*
Ga0070749_1008556623300006802AqueousMKKGHRMSMRRKLEIVRTVLNKSKGVTMLHGEKLAQHVANSITLYEKYENND*
Ga0070749_1011522743300006802AqueousMKKGHHMSMSRKLEIVRTVLNKSKGVTMLHGDKLINHVANSITLYEKYTPDEKNIEEV*
Ga0070749_1013979113300006802AqueousMKKHGPEMSMSRKLEIVRTVLSKSKGLTMLHGENLVNHVARSVKIYELPTKEEE*
Ga0070749_1016562543300006802AqueousMSMSRKLEIVRTVLNKSKGVTMLHGEKLIHHVASSITLYEKHIPNEKDTTQVGPL*
Ga0070749_1029634853300006802AqueousMKKNGHTMSAARKLEVVRAVLNKSKGLTMLHGENLVKHVANSITLYELPSKE*
Ga0070749_1031662023300006802AqueousMSMSRKLEIVRTVLNKSKGVTMLHGDKLIQHVASSITLYEKYIPDEKNTKEVGSL*
Ga0070749_1042207623300006802AqueousMGMRRKLEIVRTVLNKSKGVTMLHGEKLVQHVASSITLYEKYIPDEKDTKEVGSL*
Ga0070749_1054106833300006802AqueousMSMSRKLEIVRTVLNKSKGVTMLHGDKLVQHVANSITLYEKYIPDEKNIKEVGSL*
Ga0070749_1055720443300006802AqueousMKKGHHMSMSRKLEIVRTVLNKSKGVTMLHGDKLVQHVANSITLYEKYIPDEKNIKEVGSL*
Ga0070754_1053106213300006810AqueousMKQRHTMSMRRKLEIVRIVLNKSKGLTMLHGEKLAQHVANSITLYEKYENNN*SSGNIVSDL
Ga0075477_1039256433300006869AqueousMKQRHTMSMRRKLEIVRIVLNKSKGLTMLHGEKLAQHVANSITLYEKYENND*
Ga0075475_1025782523300006874AqueousMKKHGPEMSMSRKIEIVRTVLSKSKGLTMLHGENLVNHVARSVKIYELPTKEEE*
Ga0070746_1008634243300006919AqueousMKKGHQMSMSRKLEIVRTVLNKSKGVTMLHGDKLIQHVASSITLYEKYIPDEKSIKEV*
Ga0070746_1035791913300006919AqueousMKKGHHMSMSRKLEIVRTVLNKSKGLTTLHGDKLINHVASSITLYEKYIPDEKSIKEV*
Ga0070746_1052318643300006919AqueousIDMKKGHHMSMSRKLEIVRTVLNKSKGVTMLHGDKLIQHVASSITLYEKYIPNEKSIKEV
Ga0070745_1016404103300007344AqueousMKQRHTMSMRRKLEIVRIVLNKSKGLTMLHGEKLAQHVANSITLYEKYENNN*
Ga0070745_105697923300007344AqueousMKKGHQMSMRRKLEIVRTVLNKSKGVTMLRGEKLVHHVANSITLYEKYENND*
Ga0070745_121381733300007344AqueousPEMSMSRKIEIVRTVLSKSKGLTMLHGENLVNHVARSVKIYELPTKEEE*
Ga0070745_127662023300007344AqueousMKKGHHMSMNRKLEIVRKVLNKSKGVTMLHGDKLIQHVANSITLYEKYIPDEKNIKKV*
Ga0070745_129307523300007344AqueousMKRGHHMSMSRKLEIVRTVLNKSKGVTMLHGDKLINHVASSITLYEKYIPNEENIKEV*
Ga0070753_105677543300007346AqueousMKKGHQMSMRRKLEIVRTVLNKSKGVTMLHGEKLVHHVANSITLYEKYENND*
Ga0099851_101937263300007538AqueousMKKGHHMSMSRKLEIVRTVLNKSKGVTMLHGDKLINHVASSITLYEKYIPDEKSIKEV*
Ga0099851_104667113300007538AqueousMSRKLEIVRTVLNKSKGITMLHGDKLINHVASSITLYEKYIPDEKSIKEV*
Ga0099851_106092053300007538AqueousMKKGHQMSMSRKLEIVRTVLNKSKGLNMLHGEKLVNHIANSIVLYEQYQPSEKDEN*
Ga0099851_117489523300007538AqueousMKKGHQMSMRRKLEIVRTVLNKSKGVTMLHGEKLVHHVANSITLYEKYENRHEQSN*
Ga0099851_122624543300007538AqueousVNSFINNVMKKGHQMSMSRKLEIVRTVLNKSKGVTMLHGDKLIQHVASSITLYEKYIPDEKNIKEV*
Ga0099848_101782533300007541AqueousMKKKGRHMSMSRKLEIVRTVLNKSKGVSILHGEKLIQHVANSITLYELFIEEEKKEE*
Ga0099848_102259423300007541AqueousMKRGHQMGMRRKLEIVRTVLSKSKGVTMLHGEKLVQHVANSITLYEKFNPNEENTKEVG*
Ga0099848_104111773300007541AqueousMKKGHQMSMRRKLEIVRTVLNKSKGVTMLHGEKLVHHVANSITLYEKYEN
Ga0099848_108623713300007541AqueousMKKGHHMSMSRKLEIVRTVLNKSKGVTMLHGDKLVQHVASSITLYEKYIPDEKNTKEV*
Ga0099848_109387823300007541AqueousMKKHGPEMSMSRKLEIVRTILSKSKGLTMLHGENLVNHVARSVKIYELPTKEEE*
Ga0099848_110193823300007541AqueousMKKGHHMSMSRKLEIVRTVLNKSKGVTMLHGDKLIQHVASSITLYEKYIPNEENIKEV*
Ga0099848_110978333300007541AqueousMKKGHQMSMSRKTEIVRTVLSKAKGLNMLHGDKLVHHVANSIVLYEQYRPSEKDEKK*
Ga0099848_111026223300007541AqueousMKKKGHQMGMNRKLEIVRTVLNKSKGLSMLHGEKLVNHIANSIVLYEKYVDNSDLND*
Ga0099848_113913513300007541AqueousRRKLEIVRTVLNKSKGVTMLHGEKLVHHVANSITLYEKYENRHEQSN*
Ga0099846_110427043300007542AqueousMKKGHQMSMSRKLEIVRTVLNKSKGLNMLHGEKLVNHIANSIVLYEKYNKENENKEV*
Ga0099846_113987733300007542AqueousMKKGHHMSMSRKLEIVRTVLNKSKGVTMLHGDKLINHVASSITLYEKYIPNEKSIKEV*
Ga0099846_119974443300007542AqueousMKKGHHMSMSRKLEIVRTVLNKSKGVTMLHGDKLIQHVASSITLYEKYIPDEKNTKEV*
Ga0102819_106075313300007553EstuarineMSRDRKVEIVRTVLGRAKGLTMLHGEKLVQHVANSITLYEKHIPEND*
Ga0070751_121857123300007640AqueousMKKGHHMSMSRKLEIVRTVLNKSKGLTTLHGDKLINNVASSITLYEKYIPNEENIKEV*
Ga0070751_126334113300007640AqueousTMKKGHQMGMRRKLEIVRTVLNKSKGVTMLHGEKLVQHVASSITLYEKYIPDEKDTKEVGSL*
Ga0099850_132181423300007960AqueousMSRKLEIVRTVLNKSKGVTMLHGDKLIQHVASSITLYEKYIPDEKNIKEV*
Ga0114918_1069900613300009149Deep SubsurfaceMKKGHHMSMSRKLEIVRTVLNKSKGVTLLHGEKLVQHVASSITLYEKYVEEEKN*
Ga0127405_101380323300009480Meromictic PondMKKKGHTMTMSRKLEIVRTILNKSKGLSMLHGEKLVNHVANSITLYELHQEKMEE*
Ga0129333_1152843423300010354Freshwater To Marine Saline GradientMKKGHQMSMSRKTEIVRTVLSKAKGLNMLHGDKLVNHVANSIVLYEQYRPSEKDEN*
Ga0136852_1072007763300010412Mangrove SedimentMKKGHTMSMRRKLEIVRTVLNKSKGLTMLHGDKLVHHVANSITLYEKYENND*
Ga0117792_102507423300013941Epidermal MucusMNKKGHHMNMSRKLEIVRIVLNKSKGLTMLHGEKLINHVANSITLYEKYHNDSEDLKD*
Ga0222715_10019666103300021960Estuarine WaterMKNGHHMSRDRKVEIVRAVLNRAKGLTMLHGEKLVQHVANSITLYEKHIPEND
Ga0222715_10020634103300021960Estuarine WaterMSMRRKLEIVKTVLNKSKGLTMLHGDKLVQHVANSITLYELPTNEKN
Ga0222715_1002104653300021960Estuarine WaterMSMSRKLEIVRAVLNKSKGVTMLHGDKLIQHVASSITLYEKYIPNEKDTTQVGPI
Ga0222715_1016559023300021960Estuarine WaterMRKGRHMSMSRKLEIVRTVLNKSKGLTQLHGDKLVHHVANSITLFELEQKEKTNNQSGI
Ga0222715_1035641813300021960Estuarine WaterEIVRTVLSKAKGLNMLHGDKLVNHVANSIVLYEQYHPSEKNEN
Ga0222715_1062158533300021960Estuarine WaterMKKKGRHMSMSRKLEIVRTVLNKSKGVSILHGEKLIQHVANSITLYELFIEEEKKEE
Ga0222714_10001427463300021961Estuarine WaterMKKHGHHMSMRRKLEIVKTVLNKSKGLTMLHGDKLVQHVANSITLYELPTNEKN
Ga0222714_1001668043300021961Estuarine WaterMKKKGHTMSEARKLEVVRAVLNKSKGLTMLHGENLIKHVANSITLYELPSKE
Ga0222714_1006281833300021961Estuarine WaterMKKHGPEMSMSRKLEIVRTVLSKSKGLTMLHGENLVNHVARSVKIYELPTKEEE
Ga0222714_1027154233300021961Estuarine WaterMKKGHHMSMSRKLEIVRAVLNKSKGVTMLHGDKLIQHVASSITLYEKYIPDEKDTKKVGS
Ga0222714_1028106213300021961Estuarine WaterMKKNGHTMSAARKLEVVRAVLNKSKGLTMLHGENLVKHVANSITLYELPSKE
Ga0222714_1050773343300021961Estuarine WaterPMRKGHHMSRDRKLEIVRTVLNKAKGVTMLHGEKLVHHVANSITLYEKYNSNEENTKKVGSL
Ga0222714_1063143133300021961Estuarine WaterMSMSRKLEIVRTVLNKSKGVTMLHGDKLIQHVASSITLYEKYIPNEKDTT
Ga0222714_1065957613300021961Estuarine WaterSMSRKLEIVRTVLNKSKGVTMLHGDKLIQHVASSITLYEKYISDEKNTTQVGPF
Ga0222713_1034244633300021962Estuarine WaterMSMSRKTEIVRTVLNKAKGLNMLHGDKLIHHVANSIVLYEQYHPSEKNEN
Ga0212030_102164433300022053AqueousMKKGHQMSMSRKLEIVRTVLNKSKGVTMLHGDKLIQHVASSITLYEKYIPDEKNIKEV
Ga0212029_100353773300022063AqueousMKKGHQMSMSRKLEIVRTVLNKSKGLNMLHGEKLVNHIANSIVLYEQYQPSEKDEN
Ga0212029_101278753300022063AqueousMSMSRKLEIVRTVLNKSKGVTMLHGDKLIQHVASSITLYEKYIPNEKSIKE
Ga0212029_102580953300022063AqueousMKKGHHMSMSRKLEIVRTVLNKSKGVTMLHGDKLINHVASSITLYEKYIPDEKSIKEV
Ga0212029_103549933300022063AqueousMKRGHQMGMRRKLEIVRTVLSKSKGVTMLHGEKLVQHVANSITLYEKFNPNEENTKEVG
Ga0212029_106982223300022063AqueousMSMSRKLEIVRTVLNKSKGVTMLHGEKLVQHVASSITLYEKYIPNEKDIKKVGSL
Ga0212020_108172033300022167AqueousMSMSRKLEIVRTVLNKSKGLTTLHGDKLINHVASSITLYEKYIPNEENIKEV
Ga0212031_100008973300022176AqueousMKRGHKMGMRRKLEIVRAVLNKSKGVTMLHGDKLIQHVANSITLYEKYNSNEETTKEVGS
Ga0212031_102932233300022176AqueousMSMSRKLEIVRTVLNKSKGVTMLHGDKLVQHVANSITLYEKYIPDEKNIKEVGSL
Ga0212031_108297113300022176AqueousMSMSRKLEIVRTVLNKSKGITMLHGDKLINHVASSITLYEKYIP
Ga0196905_100158173300022198AqueousMKKGHHMSMSRKLDIVRTVLNKSKGLTMLHGEKLVHHVASSITLYEAYISDDSENKNPHK
Ga0196905_107357623300022198AqueousMKKGHQMSMRRKLEIVRTVLNKSKGVTMLHGEKLVHHVANSITLYEKYENND
Ga0196905_113449423300022198AqueousMSMSRKLEIVRTVLNKSKGVTMLHGDKLIQHVASSITLYEKYIPNEKSIKEV
Ga0196905_116554313300022198AqueousMKKGHTMSMRRKLEIVRTVLNKSKGVTMLHGEKLAQHVANSITLYEKYEDND
Ga0196901_110435743300022200AqueousMKKGHQMSMRRKLEIVRTVLNKSKGVTMLHGEKLVHHVANSITLYEKYENRHEQSN
Ga0210003_125780423300024262Deep SubsurfaceMKKGHHMSMSRKLEIVRTVLNKSKGVTLLHGEKLVQHVASSITLYEKYVEEEKN
Ga0244775_100001181113300024346EstuarineVKRGHHMSRDRKVEIVRTVLGRAKGLTMLHGEKLVQHVANSITLYEKHIPEND
Ga0208303_104161033300025543AqueousMSMSRKLEIVRTVLNKSKGVTMLHGDKLVQHVASSITLYEKYIPDEKDTKEVGSL
Ga0208303_109718713300025543AqueousEIVRTVLNKSKGVTMLHGDKLVQHVANSITLYEKYIPDEKNIKEVGSL
Ga0208161_1003848123300025646AqueousMKKGHHMSMSRKLEIVRTVLNKSKGVTMLHGDKLVQHVANSITLYEKYIPDEKNIKEVGS
Ga0208161_101773383300025646AqueousMKKGHHMSMSRKLEIVRTVLNKSKGVTMLHGDKLIQHVASSITLYEKYIPDEKNTKEVGS
Ga0208161_103411453300025646AqueousMSMSRKLEIVRTVLNKSKGVTMLHGDKLVQHVASSITLYEKYIPDEKNTKEV
Ga0208161_105457433300025646AqueousMSMSRKLEIVRTVLNKSKGVTMLHGEKLVQHVASSITLYEKYIPDEKDTTQVGPL
Ga0208161_113328723300025646AqueousMKKGHHMSMSRKLEIVRTVLNKSKGVTMLHGDKLIQHVASSITLYEKYIPNEKDTTQVGP
Ga0208161_115332213300025646AqueousMKQRHTMSMRRKLEIVRIVLNKSKGLTMLHGEKLAQHVANSITLYEKYENNNXSSGNIVSDLSDPLP
Ga0208161_115355133300025646AqueousMSMSRKLEIVRTVLNKSKGVTMLHGDKLIQHVASSITLYEKYIPDEKNTKEVGSL
Ga0208161_115841023300025646AqueousMSMSRKLEIVRTVLNKSKGVTMLHGEKLVQHVASSITLYEKYIPNEKDTKEVGSL
Ga0208160_102252613300025647AqueousMSMSRKLEIVRTVLNKSKGVTMLHGDKLIQHVASSITLYEKYIPDEKNTKEV
Ga0208795_106022323300025655AqueousMSMSRKLEIVRTVLNKSKGVTMLHGDKLVQHVASSITLYEKYIPNEKDTTQVGPL
Ga0208795_115992123300025655AqueousVNSFINNVMKKGHQMSMSRKLEIVRTVLNKSKGVTMLHGDKLIQHVASSITLYEKYIPDEKNTKEVGSL
Ga0208898_105816763300025671AqueousMKQRHTMSMRRKLEIVRIVLNKSKGLTMLHGEKLAQHVANSITLYEKYENNN
Ga0208898_110562233300025671AqueousMKKGHQMSMSRKLEIVRTVLNKSKGVTMLHGDKLIQHVASSITLYEKYIPNEENIKEV
Ga0208019_102591243300025687AqueousMKKGHHMSMSRKLEIVRTVLNKSKGVTMLHGDKLIQHVASSITLYEKYIPDEKNTKEV
Ga0208019_111949033300025687AqueousMSMSRKLEIVRTVLNKSKGVTMLHGDKLVQHVANSITLYEKYIPDEKNIK
Ga0208767_126685223300025769AqueousMKKGHQMSMSRKLEIVRTVLNKSKGLTTLHGDKLINHVASSITLYEKYIPNEKSIKEV
Ga0208644_102873263300025889AqueousMKKGHHMSMSRKLEIVRTVLNKSKGVTMLHGDKLIQHVASSITLYEKYIPNEKSIKEV
Ga0208644_104490943300025889AqueousMSMNRKLEIVRKVLNKSKGVTMLHGDKLIQHVANSITLYEKYIPDEKDTKEVGSL
Ga0208644_105745443300025889AqueousMKKGHRMSMRRKLEIVRTVLNKSKGVTMLHGEKLAQHVANSITLYEKYENND
Ga0208644_109290743300025889AqueousMKKGHHMSMSRKLEIVRTVLNKSKGVTMLHGDKLINHVANSITLYEKYTPDEKNIEEV
Ga0208644_110354213300025889AqueousMSMSRKLEIVRTVLNKSKGVTMLHGDKLIQHVASSITLYEKYIPDEKNTKE
Ga0208644_132149523300025889AqueousMGMRRKLEIVRTVLNKSKGVTMLHGEKLVQHVASSITLYEKYIPDEKDTKEVGSL
Ga0209536_10053379533300027917Marine SedimentMKKGHQMSMSRKLEIVRTVLNKSKGVTMLHGDKLIQHVASSITLYEKYIPNEKDTTQVGP
Ga0135224_100768133300029753Marine HarborMKRGHQMSMSRKLEIVRTVLNKSKGATMLHGDKLIQHVANSITLYEKYIPDEKDTKKMGS
Ga0307375_1039272833300031669SoilMSMSRKLEIVRTVLNKSKGVTMLHGDKLIQHVASSITLYEKYTPDEKDTKEV
Ga0307375_1056179523300031669SoilMKKGHQMSMSRKLEIVRTVLNKSRGATILHGDKLIQHVANSITLYEKYIPDEKNTKEVGS
Ga0348335_149378_74_2323300034374AqueousMKKGHRMSMRRKLEIVRTVLNKSKGVTMLHGEKLAQHVANSITLYEKYEDND
Ga0348337_036138_264_4283300034418AqueousMKKHGPEMSMSRKLEIVRTVLSKSKGLTMLHGENLVSHVARSVKIYELPTKEEE


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