Metagenome Family F078493

Basic Information
Family ID	F078493
Family Type	Metagenome
Number of Sequences	116
Average Sequence Length	42 residues
Representative Sequence	VTASLARLVFPALRWRRGSFAHERAKIDAALAAGVGGFIIF
Number of Associated Samples	99
Number of Associated Scaffolds	116

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	18.10 %
% of genes near scaffold ends (potentially truncated)	100.00 %
% of genes from short scaffolds (< 2000 bps)	90.52 %
Associated GOLD sequencing projects	93
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.34

Most Common Taxonomy
Group	Bacteria (97.414 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (24.138 % of family members)
Environment Ontology (ENVO)	Unclassified (50.000 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (53.448 % of family members)

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 36.23% β-sheet: 0.00% Coil/Unstructured: 63.77%
Feature Viewer

Powered by Feature Viewer

Pfam ID	Name	% Frequency in 116 Family Scaffolds
PF03702	AnmK	89.66
PF00072	Response_reg	1.72
PF04030	ALO	0.86
PF12680	SnoaL_2	0.86
PF01019	G_glu_transpept	0.86
PF09234	DUF1963	0.86

COG ID	Name	Functional Category	% Frequency in 116 Family Scaffolds
COG2377	1,6-Anhydro-N-acetylmuramate kinase	Cell wall/membrane/envelope biogenesis [M]	89.66
COG0277	FAD/FMN-containing lactate dehydrogenase/glycolate oxidase	Energy production and conversion [C]	0.86
COG0405	Gamma-glutamyltranspeptidase	Amino acid transport and metabolism [E]	0.86
COG3878	Uncharacterized conserved protein YwqG, DUF1963 family	Function unknown [S]	0.86

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	97.41 %
Unclassified	root	N/A	2.59 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	97.41 %
Unclassified	root	N/A	2.59 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	97.41 %
Unclassified	root	N/A	2.59 %

Name	Rank	Taxonomy	Distribution
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	89.66 %
Unclassified	root	N/A	2.59 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.72 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.86 %

Name	Rank	Taxonomy	Distribution
Gemmatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	89.66 %
Unclassified	root	N/A	2.59 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.86 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	0.86 %

Name	Rank	Taxonomy	Distribution
unclassified Gemmatimonadetes	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes	78.45 %
Gemmatimonadetes	class	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes	7.76 %
Unclassified	root	N/A	2.59 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.86 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.86 %

Name	Rank	Taxonomy	Distribution
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	78.45 %
Gemmatimonadales	order	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales	7.76 %
Unclassified	root	N/A	2.59 %
Myxococcales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	0.86 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	0.86 %

Name	Rank	Taxonomy	Distribution
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	78.45 %
Gemmatimonadaceae	family	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae	7.76 %
Unclassified	root	N/A	2.59 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.86 %
Myxococcales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	0.86 %

Name	Rank	Taxonomy	Distribution
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	78.45 %
Gemmatirosa	genus	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa	5.17 %
Unclassified	root	N/A	2.59 %
Gemmatimonas	genus	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatimonas	0.86 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.86 %
Myxococcales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	0.86 %

Name	Rank	Taxonomy	Distribution
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	78.45 %
Gemmatirosa kalamazoonesis	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	5.17 %
Unclassified	root	N/A	2.59 %
Gemmatimonas aurantiaca	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatimonas → Gemmatimonas aurantiaca	0.86 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.86 %
Myxococcales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	0.86 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001686\|C688J18823_10714701	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	637	Open in IMG/M
3300002560\|JGI25383J37093_10026653	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatimonas → Gemmatimonas aurantiaca	1937	Open in IMG/M
3300002560\|JGI25383J37093_10132771	Not Available	680	Open in IMG/M
3300002908\|JGI25382J43887_10302172	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	699	Open in IMG/M
3300002916\|JGI25389J43894_1040775	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	798	Open in IMG/M
3300005174\|Ga0066680_10514649	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	752	Open in IMG/M
3300005174\|Ga0066680_10626293	Not Available	670	Open in IMG/M
3300005180\|Ga0066685_10069197	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	2308	Open in IMG/M
3300005180\|Ga0066685_10495988	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	846	Open in IMG/M
3300005181\|Ga0066678_10025392	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	3159	Open in IMG/M
3300005187\|Ga0066675_10629008	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	806	Open in IMG/M
3300005294\|Ga0065705_11155920	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	510	Open in IMG/M
3300005436\|Ga0070713_100390283	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1299	Open in IMG/M
3300005552\|Ga0066701_10919248	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	518	Open in IMG/M
3300005556\|Ga0066707_10662618	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	659	Open in IMG/M
3300005559\|Ga0066700_10590226	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	775	Open in IMG/M
3300005560\|Ga0066670_10559574	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	698	Open in IMG/M
3300005561\|Ga0066699_10600138	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	791	Open in IMG/M
3300005574\|Ga0066694_10228652	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	882	Open in IMG/M
3300005586\|Ga0066691_10410599	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	805	Open in IMG/M
3300005598\|Ga0066706_10207922	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1506	Open in IMG/M
3300005843\|Ga0068860_102254060	All Organisms → cellular organisms → Bacteria	565	Open in IMG/M
3300005889\|Ga0075290_1032073	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	681	Open in IMG/M
3300006031\|Ga0066651_10023217	All Organisms → cellular organisms → Bacteria	2701	Open in IMG/M
3300006032\|Ga0066696_10338229	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	980	Open in IMG/M
3300006034\|Ga0066656_10732211	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	634	Open in IMG/M
3300006794\|Ga0066658_10637582	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	583	Open in IMG/M
3300006845\|Ga0075421_100382254	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1695	Open in IMG/M
3300006904\|Ga0075424_100565126	All Organisms → cellular organisms → Bacteria	1215	Open in IMG/M
3300007076\|Ga0075435_101007076	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	727	Open in IMG/M
3300007265\|Ga0099794_10351216	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	767	Open in IMG/M
3300009012\|Ga0066710_101417965	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1076	Open in IMG/M
3300009012\|Ga0066710_102957134	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	664	Open in IMG/M
3300009143\|Ga0099792_10470256	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	782	Open in IMG/M
3300009156\|Ga0111538_12663579	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	627	Open in IMG/M
3300009162\|Ga0075423_11076456	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	856	Open in IMG/M
3300010323\|Ga0134086_10136337	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	888	Open in IMG/M
3300010326\|Ga0134065_10088911	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1010	Open in IMG/M
3300010336\|Ga0134071_10105592	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1341	Open in IMG/M
3300011429\|Ga0137455_1256398	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	515	Open in IMG/M
3300012159\|Ga0137344_1093201	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	557	Open in IMG/M
3300012166\|Ga0137350_1112188	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	552	Open in IMG/M
3300012201\|Ga0137365_10107704	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae	2097	Open in IMG/M
3300012201\|Ga0137365_10128719	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	1903	Open in IMG/M
3300012206\|Ga0137380_11471199	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	566	Open in IMG/M
3300012207\|Ga0137381_11406162	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	590	Open in IMG/M
3300012207\|Ga0137381_11790215	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	503	Open in IMG/M
3300012208\|Ga0137376_10639079	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	920	Open in IMG/M
3300012209\|Ga0137379_10532688	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1082	Open in IMG/M
3300012285\|Ga0137370_10270087	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1010	Open in IMG/M
3300012349\|Ga0137387_10143414	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	1697	Open in IMG/M
3300012349\|Ga0137387_10521567	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	862	Open in IMG/M
3300012353\|Ga0137367_11133497	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	526	Open in IMG/M
3300012355\|Ga0137369_10454965	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	913	Open in IMG/M
3300012357\|Ga0137384_10085623	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	2621	Open in IMG/M
3300012361\|Ga0137360_10085243	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	2380	Open in IMG/M
3300012362\|Ga0137361_10708877	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	919	Open in IMG/M
3300012532\|Ga0137373_10598390	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	832	Open in IMG/M
3300012683\|Ga0137398_10216342	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1268	Open in IMG/M
3300012683\|Ga0137398_10504930	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	831	Open in IMG/M
3300012917\|Ga0137395_10074008	All Organisms → cellular organisms → Bacteria	2206	Open in IMG/M
3300012923\|Ga0137359_10282643	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1479	Open in IMG/M
3300012930\|Ga0137407_10646427	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	994	Open in IMG/M
3300012972\|Ga0134077_10482248	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	547	Open in IMG/M
3300012976\|Ga0134076_10103151	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1133	Open in IMG/M
3300012976\|Ga0134076_10247293	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	760	Open in IMG/M
3300012976\|Ga0134076_10544809	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	535	Open in IMG/M
3300012976\|Ga0134076_10620355	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	507	Open in IMG/M
3300014150\|Ga0134081_10137880	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	793	Open in IMG/M
3300015054\|Ga0137420_1292052	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	529	Open in IMG/M
3300015356\|Ga0134073_10237260	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	623	Open in IMG/M
3300017656\|Ga0134112_10195282	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	790	Open in IMG/M
3300017659\|Ga0134083_10225480	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	779	Open in IMG/M
3300017659\|Ga0134083_10431623	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	580	Open in IMG/M
3300018029\|Ga0187787_10066953	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1095	Open in IMG/M
3300018056\|Ga0184623_10326307	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	690	Open in IMG/M
3300018056\|Ga0184623_10329429	Not Available	686	Open in IMG/M
3300018431\|Ga0066655_10068558	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae	1893	Open in IMG/M
3300018431\|Ga0066655_11161720	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	544	Open in IMG/M
3300018433\|Ga0066667_10579015	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	934	Open in IMG/M
3300018433\|Ga0066667_10941701	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	744	Open in IMG/M
3300018468\|Ga0066662_12964332	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	504	Open in IMG/M
3300018482\|Ga0066669_10783727	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	843	Open in IMG/M
3300019868\|Ga0193720_1013476	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1142	Open in IMG/M
3300019882\|Ga0193713_1005200	All Organisms → cellular organisms → Bacteria	4111	Open in IMG/M
3300020170\|Ga0179594_10129926	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	922	Open in IMG/M
3300021073\|Ga0210378_10065039	All Organisms → cellular organisms → Bacteria	1432	Open in IMG/M
3300021080\|Ga0210382_10030305	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	2028	Open in IMG/M
3300024330\|Ga0137417_1425446	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1407	Open in IMG/M
3300025521\|Ga0210083_1024976	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	850	Open in IMG/M
3300025910\|Ga0207684_10429165	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1135	Open in IMG/M
3300025922\|Ga0207646_10393910	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1251	Open in IMG/M
3300026277\|Ga0209350_1095103	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	754	Open in IMG/M
3300026277\|Ga0209350_1122640	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	588	Open in IMG/M
3300026296\|Ga0209235_1233868	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	581	Open in IMG/M
3300026296\|Ga0209235_1267721	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	524	Open in IMG/M
3300026298\|Ga0209236_1323369	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	500	Open in IMG/M
3300026315\|Ga0209686_1075317	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1197	Open in IMG/M
3300026325\|Ga0209152_10056434	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1390	Open in IMG/M
3300026332\|Ga0209803_1088036	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1288	Open in IMG/M
3300026333\|Ga0209158_1302459	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	551	Open in IMG/M
3300026334\|Ga0209377_1192943	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	690	Open in IMG/M
3300026523\|Ga0209808_1017143	All Organisms → cellular organisms → Bacteria → Proteobacteria	3626	Open in IMG/M
3300026536\|Ga0209058_1249078	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	627	Open in IMG/M
3300026537\|Ga0209157_1068749	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	1785	Open in IMG/M
3300026540\|Ga0209376_1229111	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	814	Open in IMG/M
3300026548\|Ga0209161_10340826	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	678	Open in IMG/M
3300026557\|Ga0179587_10069090	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	2076	Open in IMG/M
3300027882\|Ga0209590_10458509	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	824	Open in IMG/M
3300028381\|Ga0268264_10787699	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	949	Open in IMG/M
3300028884\|Ga0307308_10205690	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	943	Open in IMG/M
3300030620\|Ga0302046_10706440	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	816	Open in IMG/M
3300031720\|Ga0307469_11352565	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	678	Open in IMG/M
3300031740\|Ga0307468_100455122	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	998	Open in IMG/M
3300031949\|Ga0214473_12121053	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	544	Open in IMG/M
3300034773\|Ga0364936_084502	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	611	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	93.97%
Host-Associated	Host-Associated	6.03%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	87.07%
Aquatic	Environmental → Aquatic	6.90%
Plants	Host-Associated → Plants	6.03%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	86.21%
Sediment	Environmental → Aquatic → Sediment	4.31%
Rhizosphere	Host-Associated → Plants → Rhizosphere	4.31%
Freshwater	Environmental → Aquatic → Freshwater	1.72%
Rhizoplane	Host-Associated → Plants → Rhizoplane	1.72%
Marine	Environmental → Aquatic → Marine	0.86%
Floodplain	Environmental → Terrestrial → Floodplain	0.86%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	80.17%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	4.31%
Loam	Environmental → Terrestrial → Soil → Loam	4.31%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	4.31%
Sediment	Environmental → Aquatic → Freshwater → Sediment	1.72%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	1.72%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	1.72%
Wetlands	Environmental → Aquatic → Marine → Wetlands	0.86%
Sediment	Environmental → Terrestrial → Floodplain → Sediment	0.86%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	39.66%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	37.93%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	4.31%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	4.31%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	2.59%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	1.72%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	1.72%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	1.72%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	1.72%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	1.72%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	0.86%
Uranium Contaminated	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated	0.86%
Unclassified	Environmental → Terrestrial → Floodplain → Sediment → Unclassified	0.86%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	24.14%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	23.28%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	14.66%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	11.21%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	4.31%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	3.45%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	2.59%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.59%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	1.72%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	1.72%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.72%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	1.72%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.72%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	0.86%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere	0.86%
Soil	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated → Soil	0.86%
Rice Paddy Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Rice Paddy Soil	0.86%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	0.86%
Sediment	Environmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment	0.86%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001686	Grasslands soil microbial communities from Hopland, California, USA	Environmental	Open in IMG/M
3300002560	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_20cm	Environmental	Open in IMG/M
3300002908	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_40cm	Environmental	Open in IMG/M
3300002916	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_1_20cm	Environmental	Open in IMG/M
3300005174	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129	Environmental	Open in IMG/M
3300005180	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134	Environmental	Open in IMG/M
3300005181	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127	Environmental	Open in IMG/M
3300005187	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124	Environmental	Open in IMG/M
3300005294	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk Soil	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150	Environmental	Open in IMG/M
3300005556	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156	Environmental	Open in IMG/M
3300005559	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149	Environmental	Open in IMG/M
3300005560	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_119	Environmental	Open in IMG/M
3300005561	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148	Environmental	Open in IMG/M
3300005574	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_143	Environmental	Open in IMG/M
3300005586	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140	Environmental	Open in IMG/M
3300005598	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155	Environmental	Open in IMG/M
3300005843	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2	Host-Associated	Open in IMG/M
3300005889	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_20C_80N_201	Environmental	Open in IMG/M
3300006031	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Angelo_100	Environmental	Open in IMG/M
3300006032	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145	Environmental	Open in IMG/M
3300006034	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_105	Environmental	Open in IMG/M
3300006794	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107	Environmental	Open in IMG/M
3300006845	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5	Host-Associated	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300007076	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4	Host-Associated	Open in IMG/M
3300007265	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009143	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2	Environmental	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300010323	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010326	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010336	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09082015	Environmental	Open in IMG/M
3300011429	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT600_2	Environmental	Open in IMG/M
3300012159	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT500_2	Environmental	Open in IMG/M
3300012166	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT660_2	Environmental	Open in IMG/M
3300012201	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012285	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_20_16 metaG	Environmental	Open in IMG/M
3300012349	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaG	Environmental	Open in IMG/M
3300012353	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_80_16 metaG	Environmental	Open in IMG/M
3300012355	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_113_16 metaG	Environmental	Open in IMG/M
3300012357	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012532	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_80_16 metaG	Environmental	Open in IMG/M
3300012683	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz2.16 metaG	Environmental	Open in IMG/M
3300012917	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaG	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012972	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300012976	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_5_0_1 metaG	Environmental	Open in IMG/M
3300014150	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300015054	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300015356	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300017656	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_11112015	Environmental	Open in IMG/M
3300017659	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300018029	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_BV01_MP06_20_MG	Environmental	Open in IMG/M
3300018056	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_100_b1	Environmental	Open in IMG/M
3300018431	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300019868	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2s1	Environmental	Open in IMG/M
3300019882	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H3a2	Environmental	Open in IMG/M
3300020170	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad1_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300021073	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_60_b1 redo	Environmental	Open in IMG/M
3300021080	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_coex redo	Environmental	Open in IMG/M
3300024330	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300025521	Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_ThreeSqB_D1 (SPAdes)	Environmental	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026277	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_2_20cm (SPAdes)	Environmental	Open in IMG/M
3300026296	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_20cm (SPAdes)	Environmental	Open in IMG/M
3300026298	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_1_40cm (SPAdes)	Environmental	Open in IMG/M
3300026315	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_126 (SPAdes)	Environmental	Open in IMG/M
3300026325	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107 (SPAdes)	Environmental	Open in IMG/M
3300026332	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138 (SPAdes)	Environmental	Open in IMG/M
3300026333	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140 (SPAdes)	Environmental	Open in IMG/M
3300026334	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141 (SPAdes)	Environmental	Open in IMG/M
3300026523	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157 (SPAdes)	Environmental	Open in IMG/M
3300026536	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147 (SPAdes)	Environmental	Open in IMG/M
3300026537	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135 (SPAdes)	Environmental	Open in IMG/M
3300026540	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134 (SPAdes)	Environmental	Open in IMG/M
3300026548	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155 (SPAdes)	Environmental	Open in IMG/M
3300026557	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal	Environmental	Open in IMG/M
3300027882	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300028381	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028884	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_195	Environmental	Open in IMG/M
3300030620	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT147D111	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300031949	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT98D197	Environmental	Open in IMG/M
3300034773	Sediment microbial communities from East River floodplain, Colorado, United States - 4_s17	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.34
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.34
Powered by PDBe Molstar

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F078493

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
C688J18823_107147011	3300001686	Soil	MTRARLVCPAVRWRRGSFKSEQANIEQALAAGVGGFILFGG
JGI25383J37093_100266531	3300002560	Grasslands Soil	VTTSLARLAFPALRWRPSGGGFDHERAKIDAALAAGVGGFIIFGGTRD
JGI25383J37093_101327712	3300002560	Grasslands Soil	MTPRARLVCPALRWRRGSFKSERTKIEQALAAGVGGFILFG
JGI25382J43887_103021722	3300002908	Grasslands Soil	VTTSLARLAFPALRWRPSGGGFDHERAKIDAALAAGVGGF
JGI25389J43894_10407751	3300002916	Grasslands Soil	VTSSLARLVFPALRWRRGSFAHERAKIDAALAAGVGGFIIF
Ga0066680_105146491	3300005174	Soil	VIQPRARLVCPALRWRRGSFRSNRATIDAALAAGVGGFIL
Ga0066680_106262931	3300005174	Soil	MIQPRARLVCPALRWRRGSFRSNRATIDAALAAGVGGFIL
Ga0066685_100691973	3300005180	Soil	VTASLARLVFPALRWRRGSFAHERAKIDAALAAGVGGFIIF
Ga0066685_104959882	3300005180	Soil	MMPPPPPRARLVCPALRWRRGSFKSERTKIEQALAAGVGG
Ga0066678_100253921	3300005181	Soil	VTDSLARLVFPALRWRRESFAHERAKIDAALAAGVGGFIIF
Ga0066675_106290082	3300005187	Soil	VTPAPSLARLVFPALRWRRGSFAHERAKIDAALAAGVGGFIIF
Ga0065705_111559201	3300005294	Switchgrass Rhizosphere	MNRARLVFPALRARNGVFTHERAKIKAALAAGVGGFIVFGGKPEAVKTLAYAA
Ga0070713_1003902832	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	VTAPPSLARLVFPALRWRPSDGSFEHERRKIDAALAAGVGGFIIFGGTRAA
Ga0066701_109192481	3300005552	Soil	VTTSLARLVFPSLRWRSGSFAHERATIDAALAAGVGGFIVF
Ga0066707_106626182	3300005556	Soil	VTTSLARLAFPALRWRPSGGGFDHERAKIDAALAAGVGGFIIFGGT
Ga0066700_105902262	3300005559	Soil	VIQPRARLVCPALRWRRGSFRSNRATIDAALAAGVGGFILFGGTRD
Ga0066670_105595741	3300005560	Soil	VTSAPSLARLVFPALRWRRGSFAHERAKIDAALAAGVGG
Ga0066699_106001381	3300005561	Soil	VTSSLARLVFPALRGRPSAGGFDHERRKIDAALAAGVGGFIVFGGTLESVT
Ga0066694_102286522	3300005574	Soil	VTTSLARLVFPSLRWRGGSFAHERATIDAALAAGV
Ga0066691_104105992	3300005586	Soil	VTTSLARLVFPALRWRGGSFDHERAKIDAALAAGV
Ga0066706_102079223	3300005598	Soil	VSASLARLVFPSLRSRPAHGGFAHERAKIDAALAAG
Ga0068860_1022540602	3300005843	Switchgrass Rhizosphere	VCPALRWRHGSFQSEQTKVKQALAAGVGGFILFGGTRAAVST
Ga0075290_10320732	3300005889	Rice Paddy Soil	VTASLARLVFPSLRWRPSEASFAHERRKIDAALAAGVGGFI
Ga0066651_100232174	3300006031	Soil	VSGSLARLVFPALRWRRQSFDHEQAKIDAALAAGVGGFIIFGGT
Ga0066696_103382292	3300006032	Soil	VSGSLARLVFPALRWRRKSFDHEQAKIDAALAAGVGGFII
Ga0066656_107322111	3300006034	Soil	VIGSLARLVFPSLRWRPSDGSFEHERRKIDAALAAGVG
Ga0066658_106375822	3300006794	Soil	VTPAPSLARLVFPALRWRRGSFAHERARIDAALAASVGGFIIFGGTREAITALTRE
Ga0075421_1003822543	3300006845	Populus Rhizosphere	MMRRPRARLVCPAIRWRRGSFQSEQVRIKEALAAGVGGFILFGGTRAA
Ga0075424_1005651263	3300006904	Populus Rhizosphere	VLLTPRARLVCPALRWRRGSFKSERTKIEQALAAGVGGFILFGGTR
Ga0075435_1010070761	3300007076	Populus Rhizosphere	MTPRARLVCPALRFRRGSFRSERVKIEQALAAGVGGFILFGGNRAAV
Ga0099794_103512163	3300007265	Vadose Zone Soil	MISPRARLVCPALRWRRGSFRSERTKIEQALAAGVGGFILFGGTR
Ga0066710_1014179652	3300009012	Grasslands Soil	VTSSLARLVFPALRWRRGSFAHERAKIDAALAAGVGGFI
Ga0066710_1029571342	3300009012	Grasslands Soil	VTGSLARLVFPALRWRRESFGHERPKIDAALAAGV
Ga0099792_104702561	3300009143	Vadose Zone Soil	VTGSLARLVFPALRWRRESFAHERPKIDAALAAGVGGFI
Ga0111538_126635791	3300009156	Populus Rhizosphere	MNRARLVFPALRARNGVFTHERAKIKAALAAGVGGFILFGGTRAAVTA
Ga0075423_110764561	3300009162	Populus Rhizosphere	MTPRARLVCPALRWRRGSFKSERSKIEQALAAGVGGFILFGG
Ga0134086_101363372	3300010323	Grasslands Soil	VTTSLARLVFPALRWRGGSFDHERAKIDAALAAGVGGFIIFGGT
Ga0134065_100889112	3300010326	Grasslands Soil	VTGSLARLVFPSLRWRRESFAHERPKIDAALAAGVGGFIVFG
Ga0134071_101055921	3300010336	Grasslands Soil	VTTSLARLVFPALRLRGGSFDHERAKIDAALAAGVGGFIIFGGTPA
Ga0137455_12563982	3300011429	Soil	VSGSLARLVFPSLRFRPSSGGFAHERAKIDAALKA
Ga0137344_10932012	3300012159	Soil	LRSSNSRARLVFPALRARRGVFTHERAKIKAALAAGVGGFILFGGTRASVTALTRAVRIE
Ga0137350_11121882	3300012166	Soil	VSGSLARLVFPSLRFRPSSGGFAHERAKIDAALKARVGGFILFGGDRESVKKLTT
Ga0137365_101077041	3300012201	Vadose Zone Soil	VTGSLARLVFPALRWRRESFGHERPKIDAALAAGVGGFIVF
Ga0137365_101287193	3300012201	Vadose Zone Soil	VTSSLARLVFPALRWRPSNGSFEHERRKIDAALAAGVGGFIIFGGNREA
Ga0137380_114711991	3300012206	Vadose Zone Soil	VSGSLARLVFPALRWRHQSFDHEQAKIDAALAAGVG
Ga0137381_114061622	3300012207	Vadose Zone Soil	MTRARLVFPALRARRGVFTHERAKITAALKAGVGGFILFGGTRDSVTALTRALRRE
Ga0137381_117902152	3300012207	Vadose Zone Soil	VTSSLARLVFPALRWRPSAGGFDHERRKIDAALAAG
Ga0137376_106390791	3300012208	Vadose Zone Soil	VTPAPSLARLVFPALRWRRGSFAHERAKIDAALAAGVGGFIIFGGTREA
Ga0137379_105326881	3300012209	Vadose Zone Soil	MIPRARLVCPALRWRRGSFRSNRATIDAALAAGVGG
Ga0137370_102700871	3300012285	Vadose Zone Soil	VSGSLARLVFPALRWRRKSFDHEQAKIDAALAAGVGGFIIFGG
Ga0137387_101434141	3300012349	Vadose Zone Soil	VTGSLARLVFPSLRWRRESFAHERPKIDAALAAGVGGFIVF
Ga0137387_105215671	3300012349	Vadose Zone Soil	VTGSLARLVFPALRWRPSDGSFAHERPKIDAALAAGVGGFIV
Ga0137367_111334972	3300012353	Vadose Zone Soil	VTSSLARLVFPALRWRPSAGSFEHERAKIDAALAAGVGGFIIF
Ga0137369_104549651	3300012355	Vadose Zone Soil	MTRARLVFPALRAQRGVFTHERAKITAALAAGVGGFILFGGTRAAVAALTRA
Ga0137384_100856231	3300012357	Vadose Zone Soil	VSASLARLVFPSLRSRPAHGGFAHERAKIEAALAAGVGGFILFSGNRESVAALTAE
Ga0137360_100852431	3300012361	Vadose Zone Soil	MIPRARLVCPALRWRRGSFKSERTKIEQALAAGVG
Ga0137361_107088771	3300012362	Vadose Zone Soil	MISPRARLVCPALRWRRGSFRSERAKIEQALAAGVGGFIL
Ga0137373_105983901	3300012532	Vadose Zone Soil	VTGSLARLVFPALRWRRASFAHERPKIDAALVAGVGGFIV
Ga0137398_102163421	3300012683	Vadose Zone Soil	MSDIVPRARLVCPALRWRRGSFTSERHKMGQALAAGVGGFILFG
Ga0137398_105049302	3300012683	Vadose Zone Soil	VTASLARLVFPALRWQRAAFANERAKIDQAIAAGVGGFIVFGGTR
Ga0137395_100740083	3300012917	Vadose Zone Soil	VTGSLARLVFPALRWRRESFAHERPKIDAALAAGVGGF
Ga0137359_102826431	3300012923	Vadose Zone Soil	MIPRARLVCPALRWRRGSFKSERTKIEQALAAGVGG
Ga0137407_106464272	3300012930	Vadose Zone Soil	MTPRARLVCPAVRWRRGSFKSERTKIEQALAAGVGGFIL
Ga0134077_104822482	3300012972	Grasslands Soil	VSGSLARLVFPALRWRRQSFDHEQAKIDAALAAGVGGFIIFGGTGAT
Ga0134076_101031511	3300012976	Grasslands Soil	VTTSLARLVFPALRWRRESFAHERPKIDAALAAGVGGFIV
Ga0134076_102472931	3300012976	Grasslands Soil	VSQPRARLVCPALRWRHGSFRSNRATIDAALAAGVGGFIL
Ga0134076_105448092	3300012976	Grasslands Soil	MTSLPRARLVCPALRWRRGSFKSERTKIEQALAAGVGGFILFGGT
Ga0134076_106203551	3300012976	Grasslands Soil	MTPRARLVCPALRWRRGSFRSERTKIEQALAAGVGGFILFGGTRA
Ga0134081_101378801	3300014150	Grasslands Soil	VTSSLARLVFPALRGRPSAGGFDHERRKIDAALAA
Ga0137420_12920521	3300015054	Vadose Zone Soil	MIPRARLVCPALRWRRGSFRSERAKIEQALAAGVGGFIPFCLAA
Ga0134073_102372602	3300015356	Grasslands Soil	VTASLARLVFPALRWRRGSFAHERAKIDAALAAGVGGFIIFGG
Ga0134112_101952822	3300017656	Grasslands Soil	VTTSLARLVFPALRWRRESFAHERPKIDAALAAGVGGFIVFGGTREA
Ga0134083_102254801	3300017659	Grasslands Soil	VTGSLARLVFPALRWRRESFGHERPKIDAALAAGVGGFI
Ga0134083_104316231	3300017659	Grasslands Soil	MIPRARLVCPALRWRRGSFKSESIKIEQALAAGVGGFILFGGTRAA
Ga0187787_100669532	3300018029	Tropical Peatland	MTSTLARLVFPSLRFRPAHGGFDHERAKIDAALVAGVGGF
Ga0184623_103263072	3300018056	Groundwater Sediment	MTRARLVFPALRARGGVFTHERAKITAALAAGVGGFILFGGTRAAVTA
Ga0184623_103294291	3300018056	Groundwater Sediment	VSASLARLVFPSLRPRGGSFAQERAKIDAALAAGVGGFIV
Ga0066655_100685581	3300018431	Grasslands Soil	VTPAPSLARLVFPALRWRRGSFAHERVKIDAALAAGV
Ga0066655_111617202	3300018431	Grasslands Soil	VSGSLARLVFPALRWRRGSFAHERPKIDAALAAGVGGFIVFGGTRDA
Ga0066667_105790151	3300018433	Grasslands Soil	VTTSLARLVFPSLRWRGGSFAHERATIDAALAAGVGGFI
Ga0066667_109417012	3300018433	Grasslands Soil	MIQPRARLVCPALRWRRGSFRSNRATIDAALAAGVGGFILFGG
Ga0066662_129643322	3300018468	Grasslands Soil	VTTSLARLVFPALRWRGGSFDHERAKIDAALAAGVGGFIIFGGTPASVGAL
Ga0066669_107837272	3300018482	Grasslands Soil	VTSSLARLVFPALRWRRGSFAHERAKIDAALAAGVGGFIIFGGTREATA
Ga0193720_10134761	3300019868	Soil	VTVSLARLVFPALRWRSTAGGFAHERPKIDAALAA
Ga0193713_10052007	3300019882	Soil	MTRARLVFPALRARRGVFTHERAKITAALAAGVGGFILFGGTRRAV
Ga0179594_101299261	3300020170	Vadose Zone Soil	MTPRARLVCPALRWRRGSFRSERTKIEQALAAGVG
Ga0210378_100650393	3300021073	Groundwater Sediment	MTPRARLVCPALRWRRGSFKSERTKIEQAVAAGVG
Ga0210382_100303053	3300021080	Groundwater Sediment	MTRARLVFPALRARGGVFTHERAKITAALAAGVGGFILFGGTRAAVTALTRALRLEAKRG
Ga0137417_14254461	3300024330	Vadose Zone Soil	VTGSLARLVFPALRWRRESFAHERPKIPRSTARWP
Ga0210083_10249761	3300025521	Natural And Restored Wetlands	VTALARLVFPALRWRNGSFAHERARIDAALAAGVGGF
Ga0207684_104291652	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	VTPPPSLARLVFPALRWRPSDGSFEHERRKIDAALAAGV
Ga0207646_103939102	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	MIPARARLVCPALRWRRGSFRSERAKIEQALAAGVGGFILFGGTHAA
Ga0209350_10951031	3300026277	Grasslands Soil	VIQPRARLVCPALRWQRGSFRSNRATIDAALAAGIG
Ga0209350_11226402	3300026277	Grasslands Soil	VTGSLARLVFPSLRWRRESFAHERPKIDAALAAGVGGFIVFGGTRE
Ga0209235_12338681	3300026296	Grasslands Soil	VSASLARLVFPSLRSRPAHGGFAHEHAKIDAALAAGVGG
Ga0209235_12677212	3300026296	Grasslands Soil	VTGSLARLVFPALRWRRESFGHERPKIDAALAAGVG
Ga0209236_13233692	3300026298	Grasslands Soil	MSASLARLVFPSLRSRPAHGGFAHEHAKIDAALAAGVGGFIL
Ga0209686_10753172	3300026315	Soil	VTASLARLVFPALRWRRGSFEQERVKIDAALAAGVGGFIIF
Ga0209152_100564343	3300026325	Soil	VTGSLARLVFPSLRWRRESFAHERPKIDAALAAGVGGFIVFGGTREAVTT
Ga0209803_10880361	3300026332	Soil	VTTSLARLAFPALRWRPSGGGFDHERAKIDAALAAGVGGFII
Ga0209158_13024591	3300026333	Soil	VTASLARLVFPALRWRRGSFAHERATIDAALTAGVGGFI
Ga0209377_11929431	3300026334	Soil	MITRARLVCPALRWRRGSFKSERTKIEQALAAGVGGFILFGGT
Ga0209808_10171431	3300026523	Soil	VSGSLARLVFPALRWRSHSFDHEQAKIDAALAAGVGGFIIFGGTRET
Ga0209058_12490782	3300026536	Soil	VIGSLARLVFPSLRWRPSDGSFEHERRKIDAALAAGVGGFIVF
Ga0209157_10687493	3300026537	Soil	VSASLARLVFPSLRSRPAHGGFAHEHAKIDAALAAGVGGFILFGGDRES
Ga0209376_12291112	3300026540	Soil	MILPPLPRARLVCPALRWRRGSFKSERTKIEQALAAGVGGFIL
Ga0209161_103408261	3300026548	Soil	VSGSLARLVFPALRWRRKSFDHEQAKIDAALAAGVGGFIIFGGT
Ga0179587_100690903	3300026557	Vadose Zone Soil	VTGSLARLVFPALRWRRESFAHERPKIEAALAAGVGGFIVFG
Ga0209590_104585093	3300027882	Vadose Zone Soil	MISPRARLVCPALRWRRGSFRSERTKIEQALAAGVGGFI
Ga0268264_107876992	3300028381	Switchgrass Rhizosphere	VCPALRWRHGSFQSEQTKVKQALAAGVGGFILFGGTRAAVSTLT
Ga0307308_102056901	3300028884	Soil	MTRARLVFPALRAQRGVFTHERAKITAALKAGVGGF
Ga0302046_107064402	3300030620	Soil	VNPLPSRARLVFPALRWRRGSFAQERAKIDAALAAG
Ga0307469_113525652	3300031720	Hardwood Forest Soil	VSASLARLVFPSLRFRPAHGGFAHERAKIDAALAAG
Ga0307468_1004551221	3300031740	Hardwood Forest Soil	MTPRARLVCPALRWRRGSFRSERSKIEQALAAGVGGFILFG
Ga0214473_121210532	3300031949	Soil	VTRARLVCPALRWRRGSFAHERATIDAALARGVGGFI
Ga0364936_084502_2_148	3300034773	Sediment	MTRARLVFPALRARGGVFTHERAKITAALAAGVGGFILFGGTRAAVTAL

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign