Metagenome Family F078441

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F078441
Family Type	Metagenome
Number of Sequences	116
Average Sequence Length	70 residues
Representative Sequence	MINEATDSVIHELRGSPTDLAKLVEAVRGRPLHVVDISAEAIIRWRNDDPCLWQLVLEWLTTMDVEVNVN
Number of Associated Samples	89
Number of Associated Scaffolds	116

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	57.39 %
% of genes near scaffold ends (potentially truncated)	22.41 %
% of genes from short scaffolds (< 2000 bps)	73.28 %
Associated GOLD sequencing projects	78
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.62

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Bacteria (91.379 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (31.034 % of family members)
Environment Ontology (ENVO)	Unclassified (35.345 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (50.000 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 45.92% β-sheet: 8.16% Coil/Unstructured: 45.92%
Feature Viewer

Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.62
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.62
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 116 Family Scaffolds
PF06146	PsiE	13.79
PF01351	RNase_HII	6.90
PF10531	SLBB	6.03
PF02021	UPF0102	6.03
PF00291	PALP	4.31
PF00072	Response_reg	3.45
PF01668	SmpB	3.45
PF12680	SnoaL_2	2.59
PF00881	Nitroreductase	2.59
PF13493	DUF4118	1.72
PF02563	Poly_export	1.72
PF01144	CoA_trans	0.86
PF04055	Radical_SAM	0.86
PF00107	ADH_zinc_N	0.86
PF02397	Bac_transf	0.86
PF00589	Phage_integrase	0.86
PF13614	AAA_31	0.86
PF00239	Resolvase	0.86
PF01245	Ribosomal_L19	0.86
PF07690	MFS_1	0.86
PF07963	N_methyl	0.86
PF07366	SnoaL	0.86

COG ID	Name	Functional Category	% Frequency in 116 Family Scaffolds
COG3223	Phosphate starvation-inducible membrane PsiE (function unknown)	General function prediction only [R]	13.79
COG0164	Ribonuclease HII	Replication, recombination and repair [L]	6.90
COG1039	Ribonuclease HIII	Replication, recombination and repair [L]	6.90
COG0792	Predicted endonuclease distantly related to archaeal Holliday junction resolvase, YraN/UPF0102 family	Replication, recombination and repair [L]	6.03
COG0691	tmRNA-binding protein	Posttranslational modification, protein turnover, chaperones [O]	3.45
COG1596	Periplasmic protein Wza involved in polysaccharide export, contains SLBB domain of the beta-grasp fold	Cell wall/membrane/envelope biogenesis [M]	1.72
COG0335	Ribosomal protein L19	Translation, ribosomal structure and biogenesis [J]	0.86
COG1788	Acyl CoA:acetate/3-ketoacid CoA transferase, alpha subunit	Lipid transport and metabolism [I]	0.86
COG1961	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	Replication, recombination and repair [L]	0.86
COG2057	Acyl-CoA:acetate/3-ketoacid CoA transferase, beta subunit	Lipid transport and metabolism [I]	0.86
COG2148	Sugar transferase involved in LPS biosynthesis (colanic, teichoic acid)	Cell wall/membrane/envelope biogenesis [M]	0.86
COG2452	Predicted site-specific integrase-resolvase	Mobilome: prophages, transposons [X]	0.86
COG4670	Acyl CoA:acetate/3-ketoacid CoA transferase	Lipid transport and metabolism [I]	0.86

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	91.38 %
Unclassified	root	N/A	8.62 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	91.38 %
Unclassified	root	N/A	8.62 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	91.38 %
Unclassified	root	N/A	8.62 %

Name	Rank	Taxonomy	Distribution
Bacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis	51.72 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	11.21 %
Unclassified	root	N/A	8.62 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	3.45 %

Name	Rank	Taxonomy	Distribution
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	51.72 %
Unclassified	root	N/A	8.62 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2.59 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	1.72 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	0.86 %
unclassified Terrabacteria group	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → unclassified Terrabacteria group	0.86 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.86 %

Name	Rank	Taxonomy	Distribution
Candidatus Rokubacteria	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	51.72 %
Unclassified	root	N/A	8.62 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2.59 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	1.72 %
Terrabacteria group bacterium ANGP1	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → unclassified Terrabacteria group → Terrabacteria group bacterium ANGP1	0.86 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.86 %
unclassified Chloroflexi	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi	0.86 %

Name	Rank	Taxonomy	Distribution
unclassified Candidatus Rokubacteria	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria	50.86 %
Unclassified	root	N/A	8.62 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2.59 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	1.72 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.86 %
Terrabacteria group bacterium ANGP1	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → unclassified Terrabacteria group → Terrabacteria group bacterium ANGP1	0.86 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.86 %

Name	Rank	Taxonomy	Distribution
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	50.86 %
Unclassified	root	N/A	8.62 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2.59 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	1.72 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.86 %
Terrabacteria group bacterium ANGP1	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → unclassified Terrabacteria group → Terrabacteria group bacterium ANGP1	0.86 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.86 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000364\|INPhiseqgaiiFebDRAFT_101802316	All Organisms → cellular organisms → Bacteria	2179	Open in IMG/M
3300000956\|JGI10216J12902_105101864	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	2660	Open in IMG/M
3300002560\|JGI25383J37093_10037863	Not Available	1598	Open in IMG/M
3300002560\|JGI25383J37093_10116472	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	760	Open in IMG/M
3300002562\|JGI25382J37095_10000199	All Organisms → cellular organisms → Bacteria	12734	Open in IMG/M
3300002908\|JGI25382J43887_10010775	All Organisms → cellular organisms → Bacteria	4637	Open in IMG/M
3300005167\|Ga0066672_10102724	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1746	Open in IMG/M
3300005171\|Ga0066677_10168171	All Organisms → cellular organisms → Bacteria	1211	Open in IMG/M
3300005175\|Ga0066673_10130214	All Organisms → cellular organisms → Bacteria	1383	Open in IMG/M
3300005175\|Ga0066673_10771755	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	551	Open in IMG/M
3300005176\|Ga0066679_10058647	All Organisms → cellular organisms → Bacteria	2242	Open in IMG/M
3300005176\|Ga0066679_10238317	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1169	Open in IMG/M
3300005176\|Ga0066679_10430899	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	863	Open in IMG/M
3300005179\|Ga0066684_10020660	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	3420	Open in IMG/M
3300005179\|Ga0066684_10052593	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2340	Open in IMG/M
3300005180\|Ga0066685_10158274	All Organisms → cellular organisms → Bacteria → Proteobacteria	1544	Open in IMG/M
3300005181\|Ga0066678_10047664	All Organisms → cellular organisms → Bacteria → Proteobacteria	2426	Open in IMG/M
3300005187\|Ga0066675_10639137	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	799	Open in IMG/M
3300005332\|Ga0066388_100842674	All Organisms → cellular organisms → Bacteria	1503	Open in IMG/M
3300005332\|Ga0066388_101588599	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	1150	Open in IMG/M
3300005347\|Ga0070668_102071507	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	525	Open in IMG/M
3300005440\|Ga0070705_100208742	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1345	Open in IMG/M
3300005445\|Ga0070708_100368716	All Organisms → cellular organisms → Bacteria	1354	Open in IMG/M
3300005446\|Ga0066686_10482080	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	845	Open in IMG/M
3300005468\|Ga0070707_100918485	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	840	Open in IMG/M
3300005536\|Ga0070697_100912409	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	780	Open in IMG/M
3300005546\|Ga0070696_101437468	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	589	Open in IMG/M
3300005556\|Ga0066707_10559577	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	736	Open in IMG/M
3300005559\|Ga0066700_10048296	All Organisms → cellular organisms → Bacteria	2602	Open in IMG/M
3300005559\|Ga0066700_10976903	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	558	Open in IMG/M
3300005561\|Ga0066699_10685894	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	731	Open in IMG/M
3300005576\|Ga0066708_10691551	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	646	Open in IMG/M
3300005598\|Ga0066706_10296941	All Organisms → cellular organisms → Bacteria → Proteobacteria	1270	Open in IMG/M
3300005713\|Ga0066905_100479981	All Organisms → cellular organisms → Bacteria	1029	Open in IMG/M
3300005764\|Ga0066903_101165295	All Organisms → cellular organisms → Bacteria	1428	Open in IMG/M
3300006800\|Ga0066660_10029346	All Organisms → cellular organisms → Bacteria → Proteobacteria	3359	Open in IMG/M
3300006844\|Ga0075428_100567733	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1212	Open in IMG/M
3300006845\|Ga0075421_100193040	Not Available	2525	Open in IMG/M
3300006845\|Ga0075421_100416305	All Organisms → cellular organisms → Bacteria	1611	Open in IMG/M
3300006845\|Ga0075421_100582833	All Organisms → cellular organisms → Bacteria	1317	Open in IMG/M
3300006846\|Ga0075430_100916802	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	722	Open in IMG/M
3300006854\|Ga0075425_103080070	Not Available	508	Open in IMG/M
3300007255\|Ga0099791_10002749	All Organisms → cellular organisms → Bacteria	7152	Open in IMG/M
3300007258\|Ga0099793_10056846	Not Available	1741	Open in IMG/M
3300007265\|Ga0099794_10230200	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	953	Open in IMG/M
3300009012\|Ga0066710_100989404	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1298	Open in IMG/M
3300009100\|Ga0075418_10633603	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1151	Open in IMG/M
3300009147\|Ga0114129_12786216	Not Available	581	Open in IMG/M
3300010046\|Ga0126384_10567370	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	989	Open in IMG/M
3300010047\|Ga0126382_11145000	All Organisms → cellular organisms → Bacteria	693	Open in IMG/M
3300010326\|Ga0134065_10195269	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	730	Open in IMG/M
3300010336\|Ga0134071_10001736	All Organisms → cellular organisms → Bacteria	7900	Open in IMG/M
3300010359\|Ga0126376_10110332	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	2120	Open in IMG/M
3300010359\|Ga0126376_10126764	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	2002	Open in IMG/M
3300010360\|Ga0126372_10163423	All Organisms → cellular organisms → Bacteria	1800	Open in IMG/M
3300011269\|Ga0137392_11567580	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	517	Open in IMG/M
3300012202\|Ga0137363_10673629	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	875	Open in IMG/M
3300012202\|Ga0137363_10819374	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	790	Open in IMG/M
3300012203\|Ga0137399_10124090	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	2032	Open in IMG/M
3300012203\|Ga0137399_10427284	Not Available	1107	Open in IMG/M
3300012203\|Ga0137399_10481450	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1040	Open in IMG/M
3300012203\|Ga0137399_10500538	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1019	Open in IMG/M
3300012203\|Ga0137399_10916669	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	738	Open in IMG/M
3300012205\|Ga0137362_10873148	Not Available	769	Open in IMG/M
3300012359\|Ga0137385_10147412	All Organisms → cellular organisms → Bacteria	2071	Open in IMG/M
3300012362\|Ga0137361_10008072	All Organisms → cellular organisms → Bacteria	7324	Open in IMG/M
3300012362\|Ga0137361_10118127	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	2333	Open in IMG/M
3300012362\|Ga0137361_11543022	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	586	Open in IMG/M
3300012363\|Ga0137390_11950783	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	514	Open in IMG/M
3300012685\|Ga0137397_10925174	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	646	Open in IMG/M
3300012917\|Ga0137395_10187374	All Organisms → cellular organisms → Bacteria	1435	Open in IMG/M
3300012918\|Ga0137396_10032985	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	3443	Open in IMG/M
3300012923\|Ga0137359_10744638	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	852	Open in IMG/M
3300012925\|Ga0137419_10618173	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	872	Open in IMG/M
3300012929\|Ga0137404_11582907	All Organisms → cellular organisms → Bacteria	607	Open in IMG/M
3300012930\|Ga0137407_10694006	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	958	Open in IMG/M
3300012944\|Ga0137410_10658649	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	870	Open in IMG/M
3300012971\|Ga0126369_11310089	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	814	Open in IMG/M
3300012971\|Ga0126369_12186229	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	641	Open in IMG/M
3300012976\|Ga0134076_10104038	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1129	Open in IMG/M
3300015241\|Ga0137418_10000888	All Organisms → cellular organisms → Bacteria	27450	Open in IMG/M
3300015241\|Ga0137418_10513619	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	956	Open in IMG/M
3300015245\|Ga0137409_10098306	All Organisms → cellular organisms → Bacteria → Proteobacteria	2718	Open in IMG/M
3300015372\|Ga0132256_102584218	Not Available	608	Open in IMG/M
3300018433\|Ga0066667_10045167	All Organisms → cellular organisms → Bacteria	2613	Open in IMG/M
3300018433\|Ga0066667_10337165	All Organisms → cellular organisms → Bacteria → Proteobacteria	1192	Open in IMG/M
3300018468\|Ga0066662_10286687	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1373	Open in IMG/M
3300018468\|Ga0066662_10959714	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	844	Open in IMG/M
3300020170\|Ga0179594_10023887	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1887	Open in IMG/M
3300020199\|Ga0179592_10059262	All Organisms → cellular organisms → Bacteria → Proteobacteria	1747	Open in IMG/M
3300024330\|Ga0137417_1173983	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1480	Open in IMG/M
3300024330\|Ga0137417_1173984	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1432	Open in IMG/M
3300026295\|Ga0209234_1057717	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1476	Open in IMG/M
3300026296\|Ga0209235_1012351	All Organisms → cellular organisms → Bacteria	4712	Open in IMG/M
3300026296\|Ga0209235_1095880	All Organisms → cellular organisms → Bacteria → Terrabacteria group → unclassified Terrabacteria group → Terrabacteria group bacterium ANGP1	1289	Open in IMG/M
3300026301\|Ga0209238_1041892	Not Available	1667	Open in IMG/M
3300026318\|Ga0209471_1026873	All Organisms → cellular organisms → Bacteria → Proteobacteria	2848	Open in IMG/M
3300026523\|Ga0209808_1044511	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	2060	Open in IMG/M
3300026524\|Ga0209690_1090327	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1273	Open in IMG/M
3300026529\|Ga0209806_1115318	All Organisms → cellular organisms → Bacteria	1105	Open in IMG/M
3300026538\|Ga0209056_10363128	All Organisms → cellular organisms → Bacteria	937	Open in IMG/M
3300026551\|Ga0209648_10040891	All Organisms → cellular organisms → Bacteria	4010	Open in IMG/M
3300026557\|Ga0179587_10174318	All Organisms → cellular organisms → Bacteria → Proteobacteria	1351	Open in IMG/M
3300027643\|Ga0209076_1117744	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	751	Open in IMG/M
3300027678\|Ga0209011_1193568	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	557	Open in IMG/M
3300027748\|Ga0209689_1029935	All Organisms → cellular organisms → Bacteria	3251	Open in IMG/M
3300027873\|Ga0209814_10103711	All Organisms → cellular organisms → Bacteria	1207	Open in IMG/M
3300027907\|Ga0207428_10205031	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1483	Open in IMG/M
3300027909\|Ga0209382_10201121	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	2284	Open in IMG/M
3300027909\|Ga0209382_11419989	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	696	Open in IMG/M
3300027909\|Ga0209382_11949826	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	565	Open in IMG/M
3300028536\|Ga0137415_10124948	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	2417	Open in IMG/M
3300028536\|Ga0137415_10673772	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	846	Open in IMG/M
3300031820\|Ga0307473_10077853	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1689	Open in IMG/M
3300032180\|Ga0307471_100620871	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1241	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	87.07%
Host-Associated	Host-Associated	12.93%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	87.07%
Plants	Host-Associated → Plants	12.93%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	87.07%
Rhizosphere	Host-Associated → Plants → Rhizosphere	12.93%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	75.86%
Loam	Environmental → Terrestrial → Soil → Loam	11.21%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	11.21%
Soil	Host-Associated → Plants → Rhizosphere → Soil	1.72%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	39.66%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	34.48%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	11.21%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	4.31%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	4.31%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	2.59%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	1.72%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	1.72%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	31.03%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	22.41%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	12.07%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	11.21%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	6.03%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	4.31%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	3.45%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	2.59%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	2.59%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.72%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	0.86%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.86%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.86%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300002560	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_20cm	Environmental	Open in IMG/M
3300002562	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_40cm	Environmental	Open in IMG/M
3300002908	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_40cm	Environmental	Open in IMG/M
3300005167	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121	Environmental	Open in IMG/M
3300005171	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_126	Environmental	Open in IMG/M
3300005175	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122	Environmental	Open in IMG/M
3300005176	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128	Environmental	Open in IMG/M
3300005179	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133	Environmental	Open in IMG/M
3300005180	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134	Environmental	Open in IMG/M
3300005181	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127	Environmental	Open in IMG/M
3300005187	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005347	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG	Host-Associated	Open in IMG/M
3300005440	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005446	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005546	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG	Environmental	Open in IMG/M
3300005556	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156	Environmental	Open in IMG/M
3300005559	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149	Environmental	Open in IMG/M
3300005561	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148	Environmental	Open in IMG/M
3300005576	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157	Environmental	Open in IMG/M
3300005598	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155	Environmental	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006800	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109	Environmental	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006845	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5	Host-Associated	Open in IMG/M
3300006846	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300007255	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1	Environmental	Open in IMG/M
3300007258	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3	Environmental	Open in IMG/M
3300007265	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010326	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010336	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09082015	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012359	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012363	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaG	Environmental	Open in IMG/M
3300012685	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaG	Environmental	Open in IMG/M
3300012917	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaG	Environmental	Open in IMG/M
3300012918	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaG	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012944	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300012976	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_5_0_1 metaG	Environmental	Open in IMG/M
3300015241	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015245	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300020170	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad1_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300020199	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300024330	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300026295	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_20cm (SPAdes)	Environmental	Open in IMG/M
3300026296	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_20cm (SPAdes)	Environmental	Open in IMG/M
3300026301	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_1_20cm (SPAdes)	Environmental	Open in IMG/M
3300026318	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128 (SPAdes)	Environmental	Open in IMG/M
3300026523	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157 (SPAdes)	Environmental	Open in IMG/M
3300026524	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150 (SPAdes)	Environmental	Open in IMG/M
3300026529	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_152 (SPAdes)	Environmental	Open in IMG/M
3300026538	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114 (SPAdes)	Environmental	Open in IMG/M
3300026551	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm (SPAdes)	Environmental	Open in IMG/M
3300026557	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal	Environmental	Open in IMG/M
3300027643	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3 (SPAdes)	Environmental	Open in IMG/M
3300027678	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM1_M3 (SPAdes)	Environmental	Open in IMG/M
3300027748	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149 (SPAdes)	Environmental	Open in IMG/M
3300027873	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1 (SPAdes)	Host-Associated	Open in IMG/M
3300027907	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes)	Host-Associated	Open in IMG/M
3300027909	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)	Host-Associated	Open in IMG/M
3300028536	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300031820	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
INPhiseqgaiiFebDRAFT_1018023164	3300000364	Soil	MDLVTQMIHELRRGPADLVQLVEAVRWRPLHVVAIPAEAIAHWRTDEPRSWNVVLEWLTTMDVEVTVS*
JGI10216J12902_1051018641	3300000956	Soil	GGAMDLVTQMIHELRRGPADLVQLVEAVRWRPLHVVAIPAEAIAHWRTDEPRSWNVVLEWLTTMDVEVTVS*
JGI25383J37093_100378631	3300002560	Grasslands Soil	MMNEATENLIDELRGSPIDLAKLVESIRWRPCRVVNISAEAIIRWRKDDPRSWRRVLEWLMTMGVDINLN*
JGI25383J37093_101164722	3300002560	Grasslands Soil	MIDEATGNLIHELRGSPTDLAKLVEAVRWRRLHAVDISTEAIIRWRKDDPRSWKLVLEWLTTMDVEVDLN*
JGI25382J37095_100001999	3300002562	Grasslands Soil	VMMNEATENLIDELRGSPIDLAKLVESIRWRPCRVVNISAEAIIRWRKDDPRSWRRVLEWLMTMGVDINLN*
JGI25382J43887_100107755	3300002908	Grasslands Soil	MNEATENLIDELRGSPIDLAKLVESIRWRPCRVVNISAEAIIRWRKDDPRSWRRVLEWLMTMGVDINLN*
Ga0066672_101027242	3300005167	Soil	MINEAADGVIQELTGSPTDLARLVEAVRGRPLHVVDISAEAILRWRNDDPYLWKRVLEWLTVMDVEVNVR*
Ga0066677_101681711	3300005171	Soil	MINEAADGVIQELTGSPTDLAKLVEAVRGRPLHVVDISAEAILRWRNDDPYLWKRVLEWLTVMDVEVNVR*
Ga0066673_101302142	3300005175	Soil	MINEAADGVIQELKGSPTDLARLVEAVRGRPLHVVDISAEAILRWRNDDPYLWKRVLEWLTVMDVEVNVS*
Ga0066673_107717551	3300005175	Soil	MINEATDRVIHELRGSPTDLAKLVEAVRGQPRHVVDISADAIIRWRNDDPCLWKLVLE
Ga0066679_100586473	3300005176	Soil	MINEATDSVIHQLTGSPTDLAKLVEAVRGRPLHVVEISAEAIIRWRNDDPSLWKLVLEWLTTMDVEVTVN*
Ga0066679_102383171	3300005176	Soil	MINEATDRVIHELRGSPTDLAKLVEAVRGRPRHVVDISAEAIIRWRNDDPCLWKLVLEWLTTMDVDITVN*
Ga0066679_104308992	3300005176	Soil	MINEAADGVIQELTGSPTDLARLVEAVRGRPLHVVDISAEAILRWRNDDPYLWKRVLEWLTLMDVEVNVS*
Ga0066684_100206604	3300005179	Soil	MINEAADGVIQELKGSPPDLARLVEAVRGRPLHVVDISAEAILRWRNDDPYLWKRVLEWLTVMDVEVNVS*
Ga0066684_100525932	3300005179	Soil	MINEATDRVIHELRGSPTDLAKLVEAVRGRPHHVVDISAETIIRWRNDDPCLWKLVLEWLTTMDVDITVN*
Ga0066685_101582742	3300005180	Soil	MINEAADGVIQELKGSPTDLARLVEAVCGRPLHVVDISAEAILRWRNDDPYLWKRVLEWLTVMDVEVNVS*
Ga0066678_100476645	3300005181	Soil	MINEAADGVIQELTGSPTDLARLVEAVRGRPLHVVDISAEAILRWRNDDPYLWKRVLEWLTVMDVEVNVS*
Ga0066675_106391371	3300005187	Soil	MINEATDSVIHQLTGSPTDLAKLVEAVRGRPLHVVEISAEAIIRWRNDDPSLWKLVLEWLTTMDV
Ga0066388_1008426742	3300005332	Tropical Forest Soil	MDLVTRMIHELRGGPADLVQLVETVRWRPLHVVAIPAEAIAHWRTDEPRSWDVVLEWLTTMDVEVNVS*
Ga0066388_1015885992	3300005332	Tropical Forest Soil	MALVAAINEPTENMIHQLRGSPADLVALVEAIRWRPLHVVAIPAEAIVHWRTDEPRSWNVVLEWLTTMDVEVTVS*
Ga0070668_1020715071	3300005347	Switchgrass Rhizosphere	MPIASQGPWEDEMDLVTTIAEPTEHMIHQLQGTPVDLVRLVEAVRWRPLHVVAIPAEAIIHWRNDEPRSWKVVLEWLTTMDVEVNVS*
Ga0070705_1002087421	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	MDLVTTIAEPTEHMIHQLQGTPVDLVRLVEAVRWRPLHVVAIPAEAIIHWRNDEPRSWKVVLEWLTTMDVEVNVS*
Ga0070708_1003687161	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MMDEPTDNVIHELRGSPTDLVKLVEAVRGRPVRVVDISAEAIIHWRTDDPYLWKLVLEWLTTMDVDVNVN*
Ga0066686_104820802	3300005446	Soil	FLGRRPTNGLKERGRSVMITGATENLIHELRGSPTDLAKLVEAVRWRPLHAVDISTEAIIRWRNDDPRSWKLVLEWLTTLDVEVNLN*
Ga0070707_1009184853	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	MMDEPTDNVIHGLRGSPTDLVKLVEAVRGRPVRVVDISAEAIIHWRTDDPYLWKLVLEWLTT
Ga0070697_1009124092	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	MISEATDTVIHELKGSPTDLARLVEAVRGRPLHVVDISADAILRWRHDDPCLWKLVLEWLTTMDVEITLN*
Ga0070696_1014374681	3300005546	Corn, Switchgrass And Miscanthus Rhizosphere	MPLAPQGPWEDEMDLVTTIEEPTDLMLRELRGTPSDLVRLVEAVRWRPLHVVAIPAEAIIHWRNDEPRSWKVVLEWLTTMDVEINVS*
Ga0066707_105595771	3300005556	Soil	MINGATENLIHELRGSPTDLAKLVEAVRWRPLHAVDISTEAIIRWRNDDPRSWKLVLEWLTTLDVEVNLN*
Ga0066700_100482963	3300005559	Soil	MINEAADGVIQELKGSPTDLARLVEAVRGRPLHVVDISAEAILRWRNDDPYLWKRVLEWLTVMDVEVNVR*
Ga0066700_109769031	3300005559	Soil	VMMNEATENLIDELRGSPIDLAKLVESIRWRPCRVVNISAEAIIRWRKDDPRSWRRVLEWLMTMG
Ga0066699_106858941	3300005561	Soil	MIDEAIDSVLHQLSGSPTDLAKLVEAVRGRPLHVVDISAEAIIRWRNDDPCLWKLVLEWLTTMDVEVTVN*
Ga0066708_106915511	3300005576	Soil	MINEATDSVIHQLTGSPTDLAKLVEAVRGRPLHVVEISAEAIIRWRNDDPSLWKLVLEWLTTMDVDITVN*
Ga0066706_102969412	3300005598	Soil	MINEATDRVIHELRGSPTDLAKLVEAVRGRPRHVVDISAEAIIRWRNDDPCLWKLVLEWLTAMDVDITVN*
Ga0066905_1004799812	3300005713	Tropical Forest Soil	MDLVTHMIHELRGGPADLVQLVEAVRWQPLHVVAIPAEAIAHWRTDEPRCWNAVLEWLTTMDVEVTVS*
Ga0066903_1011652953	3300005764	Tropical Forest Soil	MDLVTRMIHELRGGPADLVQLVETVRWRPLHVVAIPAEAIVHWRTDEPRSWDVVLEWLTTMDVEVNVS*
Ga0066660_100293465	3300006800	Soil	MINEATDRVIHQLTGSPTDLAKLVEAVRGRPLHVVEISAEAIIRWRNDDPSLWKLVLEWLTTMDVEVTVN*
Ga0075428_1005677332	3300006844	Populus Rhizosphere	MINDPAETLLHELRGSPASLVKLVEEVRWRPLLHVVDVSAEAIIGWRTDDPRAWRLVLEWLTAMDVEVSVN*
Ga0075421_1001930404	3300006845	Populus Rhizosphere	VTINDPTENLLHELREGPASLVKLVEAVRWRPLHIVDISAEAIIGWRTDDPRAWRLVLEWLTAMDVEVNVN*
Ga0075421_1004163051	3300006845	Populus Rhizosphere	IRHLEPEKFGTPLAPLQSRGRGAMDLVTNLIHELRGCTPDLVQLVETVRWRPLHAVAIPAEAIVHWRTDEPRSWKVVLEWLTTMDVDVNVS*
Ga0075421_1005828331	3300006845	Populus Rhizosphere	EPGEGAMDLVTRMIHELRGGPADLVQLVETVRWRPLHVVAIPAEAIAHWRTDEPRSWDVVLEWLTTMDVEVNVS*
Ga0075430_1009168021	3300006846	Populus Rhizosphere	RRAGLVMINDPAETLLHELRGSPASLVKLVEEVRWRPLLHVVDVSAEAIIGWRTDDPRAWRLVLEWLTAMDVEVNVN*
Ga0075425_1030800702	3300006854	Populus Rhizosphere	MDLVTQMIHELRGGPADLMQLVEAVRWRPLHVVAIPAEAIAHWRTDEPRSWNAVLEWLTTMDVEVTVS*
Ga0099791_100027498	3300007255	Vadose Zone Soil	MINEATDSVIHELRGSPTDLAKLVEAVRGRPLHVVDISAEAILRWRHDDPCLWKLVLEWLTTMDVEITVN*
Ga0099793_100568462	3300007258	Vadose Zone Soil	MTNAATDNVIPELRGSPTDLAKLVEAVRGRPLHVVDISAEAILRWRHDDPCLWKLVLEWLTTMDVEITVN*
Ga0099794_102302001	3300007265	Vadose Zone Soil	MMNEATENLIDELRGSPIDLAKLVESIRWRPCRVVNISAEAIIRWRTDDSRSWKLVLEWLTIMDVEVNVN*
Ga0066710_1009894042	3300009012	Grasslands Soil	MINGATENLIHELRGSPTDLAKLVEAVRWRPLHAVDISTEAIIRWRNDDPRSWKLVLEWLTTLDVEVNLN
Ga0075418_106336033	3300009100	Populus Rhizosphere	MDLVTRMIHELRGGPADLVQLVETVRWRPLHVVAIPAESIAHWRTDEPRSWDVVLEWLTTMDVEVNVS*
Ga0114129_127862162	3300009147	Populus Rhizosphere	MDLVTNLIHELRGCTPDLVQLVETVRWRPLHAVAIPAEAIVHWRTDEPRSWKVVLEWLTTMDVDVNVS*
Ga0126384_105673702	3300010046	Tropical Forest Soil	MDLVTHMTHELRGGPADLVQLVEAVRWQPLHVVAIPAEAIAHWRTDEPRCWNAVLEWLTTMDVEVTVS*
Ga0126382_111450001	3300010047	Tropical Forest Soil	DRIRHLESEKFGTPLAPQSPGEGAMDLVTNMIHELRGCPPDLVQLVETVRWRPLHAVAVPAEAIVHWRTDEPRSWKAVLEWLTTMDVDVSVS*
Ga0134065_101952691	3300010326	Grasslands Soil	MINEAADGVIQELKGSPTDLARLVEAVRERPLHVVDISAEAILRWRNDDPYLWKRVLEWLTVMDVEVN
Ga0134071_1000173610	3300010336	Grasslands Soil	VTIDEPTENLIHQLRGGPADLANLVEAVRWRPLRVVAIPAEAIIHWRRHDPRSWQLVLEWLTTMDVEVNVN*
Ga0126376_101103323	3300010359	Tropical Forest Soil	MDLVTNMIHELRGCPPDLVQLVETVRWRPLHAIAVPAEAIVHWRTDEPRSWKAVLEWLTTMDVDVSVS*
Ga0126376_101267642	3300010359	Tropical Forest Soil	MIHELRGGPADLVQLVETVRWRPLHVVAIPAEAIAHWRTDEPRSWDVVLEWLTTMDVEVNVS*
Ga0126372_101634232	3300010360	Tropical Forest Soil	MDLFTRMIHELRGGPADLVQLVETVRWRPLHVVAIPAEAIAHWRTDEPRSWDVVLEWLTTMDVEVNVS*
Ga0137392_115675802	3300011269	Vadose Zone Soil	MINEATDSVIHELRGSPTDLAKLVEAVRGRPLHAVDISAEAILRWRHDDPCLWKLVLEWLTTMDVEITVN*
Ga0137363_106736293	3300012202	Vadose Zone Soil	MINEATDSVIHELRGSPTDLAKLVEAVRGRPLHVVDISAEAILRWRHDDPCLWNLVLEWLTTMDVDITVN*
Ga0137363_108193742	3300012202	Vadose Zone Soil	VTIDEPTENLIHQLRGGPADLANLVEAVRWRPLRVVAIPAEAIVHWRRHDPRSWQLVLEWLTTMDVEVNVN*
Ga0137399_101240903	3300012203	Vadose Zone Soil	MINEATDNVIHELRGSPTDLAKLVEAVRRRPLHVVDISAEAIIRWRNDDPCLWQLVLEWLTTMDVEVNVN*
Ga0137399_104272842	3300012203	Vadose Zone Soil	MTNAATDNVIPELRGSPTDLAKLVEAVRGRPLHVVDISAEAILRWRHDDPCLWNLVLEWLTTMDVDITVN*
Ga0137399_104814503	3300012203	Vadose Zone Soil	MINEATDNVIRELRGSPTDLAKLVEAVRGRPLHVVEISAEAIIRWRNDDPCLWKLVLEWLTTMDVDINVN*
Ga0137399_105005381	3300012203	Vadose Zone Soil	MINQATDSVIHELRGSPTDLAKLVEAVRGRPLHVVDISAEAILRWRHDDPCLWKLVLEWLTTMDVEITVN*
Ga0137399_109166692	3300012203	Vadose Zone Soil	MINEPTENLIHELRGSPPDLAQLVEAVRWRPLRVVDIPTEAIIRWRTDDSRSWKLVLEWLTIMDVEVNVN*
Ga0137362_108731482	3300012205	Vadose Zone Soil	VTIDEPTENLIHQLRGGPADLANLVEAVRWRPLRVVAIPAEAIIQWRRHDPRSWQLVLEWLTTMDV
Ga0137385_101474121	3300012359	Vadose Zone Soil	LVTIDEPTENLIHQLRGGPADLANLVEAVRWRPLRVVAIPAEAIIHWRRHDPRSWQLVLEWLTTMDVEVNVN*
Ga0137361_100080728	3300012362	Vadose Zone Soil	VTIDEPTENLIHQLRGGPADLANLVEAVRWRPLRVVAIPAEAIIQWRRHDPRSWQLVLEWLTTMDVEVNVN*
Ga0137361_101181271	3300012362	Vadose Zone Soil	GSPTDLARLVEAVRGRPLHVVDISAEAILRWRNDDPYLWKRVLEWLTVMDVEVNVS*
Ga0137361_115430221	3300012362	Vadose Zone Soil	MISEATENLIHELRGSPTDLAKLVDAVRRRPLHVVDISTEAIIRWRKDDPRSWKLVLEWLTTMDVEVNLN*
Ga0137390_119507831	3300012363	Vadose Zone Soil	TEATENLIHELRGSPTDLAKLVEAVRWRPLHAVDISTEAIIRWRNDDPRSWKLVLEWLTTLDVEINLN*
Ga0137397_109251741	3300012685	Vadose Zone Soil	MINEATENLIHELRGSPPDLANLVEAVRWRPLHVVAIPAETVIHWRKDDPRSWMLVLEWLTIMDVEVNVN*
Ga0137395_101873744	3300012917	Vadose Zone Soil	MTNAATDNVIPELRGSPTDLAKLVEAVRGRPLHVVDISTEAIIRWRKDDPRSWKLVLEWLTTMDVEVNLN*
Ga0137396_100329858	3300012918	Vadose Zone Soil	MINEATDNVIHELRGSPTHLAKLVEAVRRRPLHVVDISAEAIIRWRNDDPCLWQLVLEWLTTMDVEVNVN*
Ga0137359_107446381	3300012923	Vadose Zone Soil	MINEATDSVIHELRGSPTDLAKLVEAVRGRPRHVVDISAEAIIRWRNDDPCLWKLVLEWLTTMDVDITVN*
Ga0137419_106181733	3300012925	Vadose Zone Soil	MISEATDSVIHELRGSPTDLAKLVEAVRGRPLHVVDISAEAILRWRHDDPCLWKLVLEWLTTMDVEITVN*
Ga0137404_115829072	3300012929	Vadose Zone Soil	MINEATESLIHELRRSPTDLAKLVEAVRWRPLHAVDISTEAIIRWRKDDPRSWKLVLEWL
Ga0137407_106940062	3300012930	Vadose Zone Soil	MINEATESLIHELRRSPTDLAKLVEAVRWRPLHAVDISTEAIIRWRKDDPRSWKLVLEWLTTMDVEINLN*
Ga0137410_106586491	3300012944	Vadose Zone Soil	MTNAATDNIIPELRGSPTDLAKLVEAVRGRPLHVVDISAEAILRWRHDDPCLWNLVLEWLTTMDVDITVN*
Ga0126369_113100892	3300012971	Tropical Forest Soil	MDLVTRMIHELRGGPADLVQLVETVRWRPLHAVAIPAEVIAHWRTDEPRSWDVVLEWLTTMDVEVNVS*
Ga0126369_121862292	3300012971	Tropical Forest Soil	MDLVAAISEPTENMIHQLRGSPADLVELVEAVRWRPLHVVAIPAEAIVHWRTDEPRSWNVVLEWLTTMDVEVTVS*
Ga0134076_101040382	3300012976	Grasslands Soil	VTIDEPTENLIHQLRGGPTDLANLVEAVRWRPLRVVAIPAEAIIHWRRHDPRSWQLVLEWLTTMDVEVNVN*
Ga0137418_100008886	3300015241	Vadose Zone Soil	MINEATDSVIHELRGSPTDLAKLVEAVRGRPLHVVDISAEAILRWRHDDPCLWKLVLEWLTTMDVDINVN*
Ga0137418_105136191	3300015241	Vadose Zone Soil	MKNAATDNVIPELRGSPTDLAKLVEAVRGRPLHVVDISAEAILRWRHDDPCLWNLVLEWLTTMDVDITVN*
Ga0137409_100983065	3300015245	Vadose Zone Soil	MINQATDSVIHELRGSPTDLAKLVEAVRGRPLHVVDISAEAILRWRHDDPCLWKLVLEWLTTMDVDIDVN*
Ga0132256_1025842181	3300015372	Arabidopsis Rhizosphere	MDLVTRMVHELRGGPADLVQLVETVRWRPLHVVAIPAEAIAHWRTDEPRSWDVVLEWLTTMDVEVNVS*
Ga0066667_100451672	3300018433	Grasslands Soil	MINEAADGVIQELTGSPTDLARLVEAVRGRPLHVVDISAEAILRWRNDDPYLWKRVLEWLTVMDVEVNVR
Ga0066667_103371652	3300018433	Grasslands Soil	MTNEATDRVIHQLTGSPTDLAKLVEAVRGRPRHVVDISAEAIIRWRNDDPCLWKLVLEWLTTMDVDITVN
Ga0066662_102866873	3300018468	Grasslands Soil	MINGATENLIHELRGSPTDLAKLVEAVRWRPPHAVDISTETIIRWRKDDPRSWKRVLEWLTTMDVEVNLN
Ga0066662_109597141	3300018468	Grasslands Soil	MINEAADGVIQELTGSPTDLAKLVEAVRGRPLHVVDISAEAILRWRNDDPYLWKRVLEWLTVMDVEVNVS
Ga0179594_100238875	3300020170	Vadose Zone Soil	MINEAADGVIQELKGSPTDLARLVEAVRGRPLHVVDISAEAILRWRNDDPYLWKRVLEWLTVMDVEVNVS
Ga0179592_100592624	3300020199	Vadose Zone Soil	MINQATDSVIHELRGSPTDLAKLVEAVRGRPLHVVDISAEAILRWRHDDPCLWKLVLEWLTTLDVDINVN
Ga0137417_11739831	3300024330	Vadose Zone Soil	WPLRVAEAEKINEATDNVIHELRGSPTHLAKLVEAVRRRPLHVVDISAEAIIRWRNDDPCLWQLVLEWLTTMDVEVNVN
Ga0137417_11739845	3300024330	Vadose Zone Soil	PLRVAEAEKINEATDNVIHELRGSPTHLAKLVEAVRRRPLHVVDISAEAIIRWRNDDPCLWQLVLEWLTTMDVEVNVN
Ga0209234_10577172	3300026295	Grasslands Soil	MTNEAIDSVIRELRGTPTDLAKLVEAVRGRPRHVVDISAEAIIRWRNDDPSLWKLVLEWLTTMDVEVTVN
Ga0209235_10123513	3300026296	Grasslands Soil	MMNEATENLIDELRGSPIDLAKLVESIRWRPCRVVNISAEAIIRWRKDDPRSWRRVLEWLMTMGVDINLN
Ga0209235_10958803	3300026296	Grasslands Soil	MIDEATGNLIHELRGSPTDLAKLVEAVRWRRLHAVDISTEAIIRWRKDDPRSWKLVLEWLTTMDVEVDLN
Ga0209238_10418923	3300026301	Grasslands Soil	MINEATDRVIHELRGSPTDLAKLVEAVRGRPLHVVDISAEAILRWRHDDPCLWKLVLEWLTTMDVDITLN
Ga0209471_10268735	3300026318	Soil	MINEATDSVIHQLTGSPTDLAKLVEAVRGRPLHVVEISAEAIIRWRNDDPSLWKLVLEWLTTMDVEVTVN
Ga0209471_11384442	3300026318	Soil	TGSPTDLARLVEAVRGRPLHVVDISAEAILRWRNDDPYLWKRVLEWLTLMDVEVNVS
Ga0209808_10445113	3300026523	Soil	MINEAADGVIQELKGSPTDLARLVEAVRERPLHVVDISAEAILRWRNDDPYLWKRVLEWLTVMDVEVNVS
Ga0209690_10903273	3300026524	Soil	DEPTENLIHQLRGGPADLANLVEAVRWRPLRVVAIPAEAIIRWRRHDPRSWQLVLEWLTTMDVEVNVN
Ga0209806_11153183	3300026529	Soil	MINEAADGVIQELKGSPTDLARLVEAVRGRPLHVVDISAEAILRWRNDDPYLWKRVLEWLTVMDVEVNVR
Ga0209056_103631281	3300026538	Soil	WPMINEAADGVIQELKGSPTDLARLVEAVRGRPLHVVDISAEAILRWRNDDPYLWKRVLEWLTVMDVEVNVS
Ga0209648_100408912	3300026551	Grasslands Soil	MINEATDSVIHELRGSPTDLAKLVEAVRGRPLHVVDISAEAIIRWRNDDPCLWQLVLEWLTTMDVEVNVN
Ga0179587_101743181	3300026557	Vadose Zone Soil	MINQATDSVIHELRGSPTDLAKLVEAVRGRPLHVVDISAEAILRWRHDDPCLWKLVLEWLTTMDVEIPVN
Ga0209076_11177441	3300027643	Vadose Zone Soil	MINEATDSVIHELRGSPTDLAKLVEAVRGRPLHVVDISAEAILRWRHDDPCLWKLVLEWLTTMDVEITVN
Ga0209011_11935683	3300027678	Forest Soil	MINEATDNVIHELRGSPTELAKLVEAVRGRPVHVVDISAEAIIRWRTDDPCLWKLVLEWLTTMDVEVNV
Ga0209689_10299353	3300027748	Soil	MINEAADGVIQELTGSPTDLAKLVEAVRGRPLHVVDISAEAILRWRNDDPYLWKRVLEWLTVMDVEVNVR
Ga0209814_101037113	3300027873	Populus Rhizosphere	MDLVTRMIHELRGGPADLVQLVETVRWQPLHVVAIPAEAIAHWRTDEPRSWDVVLEWLTTMDVEVNVS
Ga0207428_102050311	3300027907	Populus Rhizosphere	PGEGAMDLVTRMIHELRGGPADLVQLVETVRWRPLHVVAIPAEAIAHWRTDEPRSWDVVLEWLTTMDVEVNVS
Ga0209382_102011211	3300027909	Populus Rhizosphere	MINDPAETLLHELRGSPASLVKLVEEVRWRPLLHVVDVSAEAIIGWRTDDPRAWRLVLEWLTAMDVE
Ga0209382_114199892	3300027909	Populus Rhizosphere	MDLVTRMIHELRGGPADLVQLVETVRWRPLHVVAIPAEAIAHWRTDEPRSWDVVLEWLTTMDVEVNVS
Ga0209382_119498262	3300027909	Populus Rhizosphere	VTINDPTENLLHELREGPASLVKLVEAVRWRPLHIVDISAEAIIGWRTDDPRAWRLVLEWLTAMDVEVNVN
Ga0137415_101249483	3300028536	Vadose Zone Soil	MINEATDNVIHELRGSPTDLAKLVEAVRRRPLHVVDISAEAIIRWRNDDPCLWQLVLEWLTTMDVEVNVN
Ga0137415_106737723	3300028536	Vadose Zone Soil	MINQATDSVIHELRGSPTDLAKLVEAVRGRPLHVVDISAEAILRWRHDDPCLWKLVLEWLTTMDVEITVN
Ga0307473_100778534	3300031820	Hardwood Forest Soil	MDLLTTINEPTEHMIHQLRGTSTDLVRLVEAVRWRPLHVVAIPAEAIIHWRTDEPRSWNVVLEWLTTMDVEINVS
Ga0307471_1006208715	3300032180	Hardwood Forest Soil	MMDEPTDNVIHGLRGSPTDLVKLVEAVRGRPVRVVDISAEAIIHWRTDDPYLWKLVLEWL

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F078441

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences