Metagenome Family F078335

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F078335
Family Type	Metagenome
Number of Sequences	116
Average Sequence Length	68 residues
Representative Sequence	VVLLDPVIHLYWAHALARAEEMLKVTHFPMGVCGAQAEREYVTLDSKKITCPSCRERAKARSGSEQER
Number of Associated Samples	78
Number of Associated Scaffolds	116

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	73.28 %
% of genes near scaffold ends (potentially truncated)	39.66 %
% of genes from short scaffolds (< 2000 bps)	94.83 %
Associated GOLD sequencing projects	68
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (67.241 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (37.931 % of family members)
Environment Ontology (ENVO)	Unclassified (75.000 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (55.172 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 45.59% β-sheet: 0.00% Coil/Unstructured: 54.41%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 116 Family Scaffolds
PF04392	ABC_sub_bind	2.59
PF03734	YkuD	2.59
PF03401	TctC	1.72
PF00106	adh_short	0.86
PF02627	CMD	0.86
PF13561	adh_short_C2	0.86
PF08734	GYD	0.86
PF05233	PHB_acc	0.86
PF00583	Acetyltransf_1	0.86
PF12680	SnoaL_2	0.86
PF00990	GGDEF	0.86
PF13358	DDE_3	0.86
PF00656	Peptidase_C14	0.86

COG ID	Name	Functional Category	% Frequency in 116 Family Scaffolds
COG1376	Lipoprotein-anchoring transpeptidase ErfK/SrfK	Cell wall/membrane/envelope biogenesis [M]	2.59
COG2984	ABC-type uncharacterized transport system, periplasmic component	General function prediction only [R]	2.59
COG3034	Murein L,D-transpeptidase YafK	Cell wall/membrane/envelope biogenesis [M]	2.59
COG3181	Tripartite-type tricarboxylate transporter, extracytoplasmic receptor component TctC	Energy production and conversion [C]	1.72
COG0599	Uncharacterized conserved protein YurZ, alkylhydroperoxidase/carboxymuconolactone decarboxylase family	General function prediction only [R]	0.86
COG2128	Alkylhydroperoxidase family enzyme, contains CxxC motif	Inorganic ion transport and metabolism [P]	0.86
COG4249	Uncharacterized conserved protein, contains caspase domain	General function prediction only [R]	0.86
COG4274	Uncharacterized conserved protein, contains GYD domain	Function unknown [S]	0.86
COG5394	Polyhydroxyalkanoate (PHA) synthesis regulator protein, binds DNA and PHA	Signal transduction mechanisms [T]	0.86

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	67.24 %
All Organisms	root	All Organisms	32.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	67.24 %
cellular organisms	root	All Organisms → cellular organisms	32.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	67.24 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	32.76 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	67.24 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	21.55 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.86 %
Bacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis	0.86 %
Spirochaetes	phylum	All Organisms → cellular organisms → Bacteria → Spirochaetes	0.86 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	67.24 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	19.83 %
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	0.86 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.86 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.86 %
Spirochaetia	class	All Organisms → cellular organisms → Bacteria → Spirochaetes → Spirochaetia	0.86 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	67.24 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	11.21 %
Rhodobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales	3.45 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	2.59 %
Patescibacteria group	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group	0.86 %
Spirochaetales	order	All Organisms → cellular organisms → Bacteria → Spirochaetes → Spirochaetia → Spirochaetales	0.86 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.86 %
unclassified Chloroflexi	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi	0.86 %
Caulobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales	0.86 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	67.24 %
Roseobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae	3.45 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2.59 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	2.59 %
unclassified Hyphomicrobiales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales	2.59 %
Parcubacteria group	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Parcubacteria group	0.86 %
Treponemataceae	family	All Organisms → cellular organisms → Bacteria → Spirochaetes → Spirochaetia → Spirochaetales → Treponemataceae	0.86 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.86 %
Caulobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae	0.86 %
Hyphomicrobiales incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiales incertae sedis	0.86 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.86 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	67.24 %
Antarctobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae → Antarctobacter	3.45 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	2.59 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2.59 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1.72 %
unclassified Parcubacteria group	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Parcubacteria group → unclassified Parcubacteria group	0.86 %
Treponema	genus	All Organisms → cellular organisms → Bacteria → Spirochaetes → Spirochaetia → Spirochaetales → Treponemataceae → Treponema	0.86 %
Nordella	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiales incertae sedis → Nordella	0.86 %
Phenylobacterium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Phenylobacterium	0.86 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.86 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.86 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	67.24 %
Antarctobacter heliothermus	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae → Antarctobacter → Antarctobacter heliothermus	3.45 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	2.59 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2.59 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1.72 %
unclassified Nordella	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiales incertae sedis → Nordella → unclassified Nordella	0.86 %
unclassified Treponema	no rank	All Organisms → cellular organisms → Bacteria → Spirochaetes → Spirochaetia → Spirochaetales → Treponemataceae → Treponema → unclassified Treponema	0.86 %
unclassified Phenylobacterium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Phenylobacterium → unclassified Phenylobacterium	0.86 %
Parcubacteria group bacterium GW2011_GWA2_47_8	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Parcubacteria group → unclassified Parcubacteria group → Parcubacteria group bacterium GW2011_GWA2_47_8	0.86 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.86 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.86 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	67.24 %
Antarctobacter heliothermus	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae → Antarctobacter → Antarctobacter heliothermus	3.45 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	2.59 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2.59 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1.72 %
Treponema sp. GWC1_61_84	species	All Organisms → cellular organisms → Bacteria → Spirochaetes → Spirochaetia → Spirochaetales → Treponemataceae → Treponema → unclassified Treponema → Treponema sp. GWC1_61_84	0.86 %
Nordella sp. HKS 07	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiales incertae sedis → Nordella → unclassified Nordella → Nordella sp. HKS 07	0.86 %
Phenylobacterium sp. SCN 70-31	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Phenylobacterium → unclassified Phenylobacterium → Phenylobacterium sp. SCN 70-31	0.86 %
Parcubacteria group bacterium GW2011_GWA2_47_8	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Parcubacteria group → unclassified Parcubacteria group → Parcubacteria group bacterium GW2011_GWA2_47_8	0.86 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.86 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.86 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300002568\|C688J35102_120962200	All Organisms → cellular organisms → Bacteria	3276	Open in IMG/M
3300004643\|Ga0062591_100965106	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	807	Open in IMG/M
3300004643\|Ga0062591_102619499	Not Available	532	Open in IMG/M
3300005332\|Ga0066388_100656747	Not Available	1662	Open in IMG/M
3300005764\|Ga0066903_103214095	Not Available	884	Open in IMG/M
3300005764\|Ga0066903_104596830	Not Available	735	Open in IMG/M
3300005764\|Ga0066903_106876981	All Organisms → cellular organisms → Bacteria → Spirochaetes → Spirochaetia → Spirochaetales → Treponemataceae → Treponema → unclassified Treponema → Treponema sp. GWC1_61_84	591	Open in IMG/M
3300005764\|Ga0066903_108195947	Not Available	535	Open in IMG/M
3300006854\|Ga0075425_102202162	Not Available	614	Open in IMG/M
3300006871\|Ga0075434_100647689	Not Available	1075	Open in IMG/M
3300009156\|Ga0111538_13298304	Not Available	562	Open in IMG/M
3300010038\|Ga0126315_10889962	Not Available	591	Open in IMG/M
3300010042\|Ga0126314_10958600	Not Available	634	Open in IMG/M
3300010044\|Ga0126310_11081990	Not Available	637	Open in IMG/M
3300010048\|Ga0126373_11718217	Not Available	691	Open in IMG/M
3300010366\|Ga0126379_11023824	Not Available	931	Open in IMG/M
3300010366\|Ga0126379_11932889	Not Available	693	Open in IMG/M
3300010371\|Ga0134125_11769300	Not Available	672	Open in IMG/M
3300010399\|Ga0134127_12032694	Not Available	653	Open in IMG/M
3300011119\|Ga0105246_11139475	Not Available	714	Open in IMG/M
3300012899\|Ga0157299_10176776	Not Available	625	Open in IMG/M
3300012971\|Ga0126369_10095341	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2679	Open in IMG/M
3300012971\|Ga0126369_12436443	Not Available	609	Open in IMG/M
3300015200\|Ga0173480_10949855	Not Available	562	Open in IMG/M
3300015371\|Ga0132258_10222101	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	4597	Open in IMG/M
3300015371\|Ga0132258_10686130	Not Available	2577	Open in IMG/M
3300015373\|Ga0132257_100533057	Not Available	1444	Open in IMG/M
3300015374\|Ga0132255_102109001	Not Available	859	Open in IMG/M
3300016270\|Ga0182036_10315768	All Organisms → cellular organisms → Bacteria	1193	Open in IMG/M
3300016294\|Ga0182041_10340349	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1257	Open in IMG/M
3300016294\|Ga0182041_11792318	All Organisms → cellular organisms → Bacteria	569	Open in IMG/M
3300016319\|Ga0182033_10697693	Not Available	888	Open in IMG/M
3300016341\|Ga0182035_10252822	All Organisms → cellular organisms → Bacteria	1423	Open in IMG/M
3300016341\|Ga0182035_11140593	Not Available	695	Open in IMG/M
3300016341\|Ga0182035_11736391	Not Available	564	Open in IMG/M
3300016357\|Ga0182032_10296958	Not Available	1274	Open in IMG/M
3300016371\|Ga0182034_10829190	Not Available	792	Open in IMG/M
3300016387\|Ga0182040_10389925	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae → Antarctobacter → Antarctobacter heliothermus	1090	Open in IMG/M
3300016387\|Ga0182040_10486850	Not Available	983	Open in IMG/M
3300016387\|Ga0182040_11853904	Not Available	517	Open in IMG/M
3300016404\|Ga0182037_10631582	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	911	Open in IMG/M
3300016404\|Ga0182037_10690664	Not Available	873	Open in IMG/M
3300016422\|Ga0182039_10167689	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1720	Open in IMG/M
3300016422\|Ga0182039_10558034	All Organisms → cellular organisms → Bacteria	996	Open in IMG/M
3300016422\|Ga0182039_11134265	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae → Antarctobacter → Antarctobacter heliothermus	705	Open in IMG/M
3300016445\|Ga0182038_10906867	All Organisms → cellular organisms → Bacteria	777	Open in IMG/M
3300016445\|Ga0182038_11676887	Not Available	572	Open in IMG/M
3300027703\|Ga0207862_1054110	All Organisms → cellular organisms → Bacteria	1210	Open in IMG/M
3300031543\|Ga0318516_10252308	Not Available	1020	Open in IMG/M
3300031543\|Ga0318516_10864225	Not Available	510	Open in IMG/M
3300031545\|Ga0318541_10651947	Not Available	588	Open in IMG/M
3300031545\|Ga0318541_10806018	Not Available	524	Open in IMG/M
3300031546\|Ga0318538_10470579	Not Available	681	Open in IMG/M
3300031573\|Ga0310915_10625624	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	762	Open in IMG/M
3300031640\|Ga0318555_10675083	Not Available	559	Open in IMG/M
3300031668\|Ga0318542_10172370	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiales incertae sedis → Nordella → unclassified Nordella → Nordella sp. HKS 07	1083	Open in IMG/M
3300031680\|Ga0318574_10582919	Not Available	656	Open in IMG/M
3300031681\|Ga0318572_10923046	Not Available	518	Open in IMG/M
3300031682\|Ga0318560_10768681	Not Available	520	Open in IMG/M
3300031713\|Ga0318496_10548602	Not Available	639	Open in IMG/M
3300031719\|Ga0306917_10626378	All Organisms → cellular organisms → Bacteria	846	Open in IMG/M
3300031719\|Ga0306917_10634539	Not Available	840	Open in IMG/M
3300031744\|Ga0306918_10244751	Not Available	1367	Open in IMG/M
3300031744\|Ga0306918_11162926	Not Available	596	Open in IMG/M
3300031751\|Ga0318494_10373759	Not Available	826	Open in IMG/M
3300031768\|Ga0318509_10550263	Not Available	644	Open in IMG/M
3300031770\|Ga0318521_10340099	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	888	Open in IMG/M
3300031770\|Ga0318521_10723260	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Phenylobacterium → unclassified Phenylobacterium → Phenylobacterium sp. SCN 70-31	605	Open in IMG/M
3300031771\|Ga0318546_10546325	Not Available	814	Open in IMG/M
3300031771\|Ga0318546_11099076	Not Available	559	Open in IMG/M
3300031777\|Ga0318543_10229231	Not Available	827	Open in IMG/M
3300031778\|Ga0318498_10203000	Not Available	899	Open in IMG/M
3300031779\|Ga0318566_10317149	Not Available	771	Open in IMG/M
3300031782\|Ga0318552_10184514	Not Available	1054	Open in IMG/M
3300031794\|Ga0318503_10171573	Not Available	702	Open in IMG/M
3300031795\|Ga0318557_10084856	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1385	Open in IMG/M
3300031797\|Ga0318550_10021144	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2697	Open in IMG/M
3300031797\|Ga0318550_10125899	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1222	Open in IMG/M
3300031833\|Ga0310917_10556461	Not Available	780	Open in IMG/M
3300031846\|Ga0318512_10537598	Not Available	594	Open in IMG/M
3300031879\|Ga0306919_10289446	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1241	Open in IMG/M
3300031890\|Ga0306925_10475424	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1333	Open in IMG/M
3300031896\|Ga0318551_10221344	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1052	Open in IMG/M
3300031897\|Ga0318520_10561060	Not Available	708	Open in IMG/M
3300031910\|Ga0306923_10842804	Not Available	1009	Open in IMG/M
3300031910\|Ga0306923_10946634	All Organisms → cellular organisms → Bacteria → Proteobacteria	940	Open in IMG/M
3300031910\|Ga0306923_11137681	Not Available	838	Open in IMG/M
3300031910\|Ga0306923_12058166	Not Available	577	Open in IMG/M
3300031912\|Ga0306921_10898346	Not Available	1006	Open in IMG/M
3300031912\|Ga0306921_11738828	Not Available	673	Open in IMG/M
3300031942\|Ga0310916_10467165	Not Available	1075	Open in IMG/M
3300031942\|Ga0310916_10674260	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	876	Open in IMG/M
3300031942\|Ga0310916_10774879	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae → Antarctobacter → Antarctobacter heliothermus	809	Open in IMG/M
3300031945\|Ga0310913_10584966	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	792	Open in IMG/M
3300031947\|Ga0310909_10612573	All Organisms → cellular organisms → Bacteria	909	Open in IMG/M
3300031954\|Ga0306926_10794373	All Organisms → cellular organisms → Bacteria	1141	Open in IMG/M
3300031954\|Ga0306926_12421845	Not Available	578	Open in IMG/M
3300031954\|Ga0306926_12819775	Not Available	524	Open in IMG/M
3300031959\|Ga0318530_10491863	Not Available	510	Open in IMG/M
3300032041\|Ga0318549_10563884	Not Available	511	Open in IMG/M
3300032052\|Ga0318506_10153886	Not Available	1007	Open in IMG/M
3300032055\|Ga0318575_10452965	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Parcubacteria group → unclassified Parcubacteria group → Parcubacteria group bacterium GW2011_GWA2_47_8	652	Open in IMG/M
3300032063\|Ga0318504_10512383	Not Available	575	Open in IMG/M
3300032068\|Ga0318553_10541131	Not Available	610	Open in IMG/M
3300032076\|Ga0306924_10097217	Not Available	3325	Open in IMG/M
3300032076\|Ga0306924_11613447	Not Available	683	Open in IMG/M
3300032076\|Ga0306924_12621484	Not Available	502	Open in IMG/M
3300032091\|Ga0318577_10450031	Not Available	615	Open in IMG/M
3300032094\|Ga0318540_10420263	Not Available	646	Open in IMG/M
3300032261\|Ga0306920_100430246	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1962	Open in IMG/M
3300032261\|Ga0306920_101177736	Not Available	1108	Open in IMG/M
3300032261\|Ga0306920_101964983	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae → Antarctobacter → Antarctobacter heliothermus	820	Open in IMG/M
3300032261\|Ga0306920_102233730	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	760	Open in IMG/M
3300032261\|Ga0306920_102345940	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	738	Open in IMG/M
3300032261\|Ga0306920_104353370	Not Available	508	Open in IMG/M
3300033289\|Ga0310914_11798972	Not Available	517	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	93.10%
Host-Associated	Host-Associated	6.90%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	93.10%
Plants	Host-Associated → Plants	6.90%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	93.10%
Rhizoplane	Host-Associated → Plants → Rhizoplane	3.45%
Rhizosphere	Host-Associated → Plants → Rhizosphere	3.45%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	87.07%
Loam	Environmental → Terrestrial → Soil → Loam	6.03%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	3.45%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	3.45%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	75.00%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	10.34%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	5.17%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	3.45%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	3.45%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.72%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.86%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	37.93%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	37.07%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	5.17%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	4.31%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	3.45%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	2.59%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	2.59%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.72%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.72%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	1.72%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.86%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.86%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300002568	Grasslands soil microbial communities from Hopland, California, USA - 2	Environmental	Open in IMG/M
3300004643	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300010038	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot106	Environmental	Open in IMG/M
3300010042	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105B	Environmental	Open in IMG/M
3300010044	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot60	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010371	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1	Environmental	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300011119	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG	Host-Associated	Open in IMG/M
3300012899	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S058-202B-2	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300015200	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S209-509C-1 (version 2)	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300027703	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 81 (SPAdes)	Environmental	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031546	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f23	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031640	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f23	Environmental	Open in IMG/M
3300031668	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f23	Environmental	Open in IMG/M
3300031680	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f22	Environmental	Open in IMG/M
3300031681	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f20	Environmental	Open in IMG/M
3300031682	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f22	Environmental	Open in IMG/M
3300031713	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f22	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031751	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f24	Environmental	Open in IMG/M
3300031768	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f22	Environmental	Open in IMG/M
3300031770	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f17	Environmental	Open in IMG/M
3300031771	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19	Environmental	Open in IMG/M
3300031777	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f24	Environmental	Open in IMG/M
3300031778	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f24	Environmental	Open in IMG/M
3300031779	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f22	Environmental	Open in IMG/M
3300031782	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f20	Environmental	Open in IMG/M
3300031794	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f23	Environmental	Open in IMG/M
3300031795	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f19	Environmental	Open in IMG/M
3300031797	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f23	Environmental	Open in IMG/M
3300031833	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178	Environmental	Open in IMG/M
3300031846	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f19	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031896	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f19	Environmental	Open in IMG/M
3300031897	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f16	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300031959	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f24	Environmental	Open in IMG/M
3300032041	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f22	Environmental	Open in IMG/M
3300032052	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f19	Environmental	Open in IMG/M
3300032055	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f23	Environmental	Open in IMG/M
3300032063	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f17	Environmental	Open in IMG/M
3300032068	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f21	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032091	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f25	Environmental	Open in IMG/M
3300032094	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f25	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
C688J35102_1209622005	3300002568	Soil	VLLRDPVIHLYWAYALARVEEMFQETPFPTGVCGAHAERECVTLDPKKITCPFCRQRAKVRSGSERER*
Ga0062591_1009651062	3300004643	Soil	VVLLDPVIHLYWAYALARADEMFKVTRFPPGICGAQDERECVTLDPKKITCPSCRERAKARSGAASARPG*
Ga0062591_1026194991	3300004643	Soil	DPVIHLYWAHALARAEEMFKETSFPTGMCGAQAERECVTLDAKKVNCPSCRERAKASAAPSRREEPWR*
Ga0066388_1006567473	3300005332	Tropical Forest Soil	VVLLDPVIHLYWAHALARAEEMLKVTHFPMGVCGAQAEREYVTLDSKKITCPSCRERAKARSGSEQER*
Ga0066903_1032140951	3300005764	Tropical Forest Soil	VALPDPVIHLYWAYALARAKEMFKVTLFPMGVCGAQAEREYVSLDPRRITCPFCRERAKARNSSEKER*
Ga0066903_1045968302	3300005764	Tropical Forest Soil	VVLLDPVIHLYWAHALARAEEMLKVTHFPMGVCGAQAQREYVTLDSKKITCPSCRERAKARSGSEQER*
Ga0066903_1068769812	3300005764	Tropical Forest Soil	VVLPDPVIHLYWAYALARAEEMFKVTRFPIGACGAQAEREYVTLDPKKITCASCRERARARSASEPPAVGLSRP*
Ga0066903_1081959472	3300005764	Tropical Forest Soil	VVLLNPIIHLYWAHALARAEEMLKVAHFPMGVCGAQAEREHVTLDSKKITCPSCRERA
Ga0075425_1022021621	3300006854	Populus Rhizosphere	VLLPDPVIHLYWAHALARAEEMFKETSFPTGMCGAQAERECVTLDAKKVTCPSCRERAKASAAPSRREEPWR*
Ga0075434_1006476891	3300006871	Populus Rhizosphere	VLLPDPVIHLYWAHALARAEEMFKETSFPTGMCGAQAERECVTLDAKKITCPSCRERAKASAAPSRRDEPWP*
Ga0111538_132983041	3300009156	Populus Rhizosphere	VLLPDPVIHLYWAYALARADEMFKVTRFPPGICGAQDDRDCVTLDPKKITCPFCRERAQAIRLRFVVS*
Ga0126315_108899621	3300010038	Serpentine Soil	DPVIHLYWAYALVRAEKMFKVTRFPPGICGAQAEREYVTMDPKKITCPFCRQRAKARSGSERER*
Ga0126314_109586001	3300010042	Serpentine Soil	MRIDESASAEEPACFYPDPVIHLYWAYALARVEEMFKETPFPTGVCGAHAERECVTLDPKKITCPFCRQRAKARSGSERER*
Ga0126310_110819901	3300010044	Serpentine Soil	MDESASAEEPACFYPDPVIHLYWAYALARVEEMFQETPFPTGVCGAHAERECVTLDPKKITCPFCRQRAKARSGSERER*
Ga0126373_117182171	3300010048	Tropical Forest Soil	VALPDPVIHLYWAHALARAKEMFKVTFFPMGVCGAQTERVYVSLDPRRITCPFCRERAKARNGSEKER*
Ga0126379_110238241	3300010366	Tropical Forest Soil	VVLPHPVIHLYWAYALARAEEMFKVTRFPIGSCGAQAEREYVTLDPKKITCPSCRERAKTRSGSEQER*
Ga0126379_119328891	3300010366	Tropical Forest Soil	VVLPDPVIHLYWAHALAKAEEMLKVTHFPMGVCGAPAEREHVTLDSKKITCPSCRERAKA
Ga0134125_117693001	3300010371	Terrestrial Soil	VLLPDPVIHLYWAHALARAEEMFKETSFPTGMCGAQAERDCVTLDAKKITCPSCRERA
Ga0134127_120326942	3300010399	Terrestrial Soil	VLLPDPVIHLYWAHALARAEEMFKGTSFPTGMCGAQAERECVTLDAKKITCPSCRERAKARSGA
Ga0105246_111394751	3300011119	Miscanthus Rhizosphere	VLLPDPVIHLYWAHALARAEEMFKETSFPTGMCGTQAERECVTLDAKKVTCPSCRERAKASAAPSRREEPWR*
Ga0157299_101767762	3300012899	Soil	VVLLDPVIHLYWAYALARADEMFKVTRFPPGICGAQDERECVTLDPKKITCPSCRERAKASGAASARPG*
Ga0126369_100953411	3300012971	Tropical Forest Soil	LVLLDAVIHLYWAHALARAEEMLKVTHFPMGVCGAQAEREHVTLDSKKITCPSCRERAKARSGSEQER*
Ga0126369_124364431	3300012971	Tropical Forest Soil	VVLPDPVIHLYWAYAVARAEEMFKVTRFPVGACGAQAEREYVTLDPKKITCPSCRERAKTRSGSEQER*
Ga0173480_109498552	3300015200	Soil	VLLPDPVIHLYWAHALARAEEMFKETSFPTGMCGAQAERDCVTLDAKKITCPSCRER
Ga0132258_102221018	3300015371	Arabidopsis Rhizosphere	VAVPNPVIHLYWAYALARADEMFKVTRFPPGICGAQDEQECVTLDPKKITCPSCRERATATSRSVQQR*
Ga0132258_106861302	3300015371	Arabidopsis Rhizosphere	VLLPDPVIHLYWAHALARAEEMFKGTSFPTGMCGAQAERECVTLDAKKITCPSCRERAKASAAPSRRDEPWP*
Ga0132257_1005330571	3300015373	Arabidopsis Rhizosphere	RAEEMFKETSFPTGMCGTQAERECVTLDAKKVTCPSCRERAKASAAPSRREGPWR*
Ga0132255_1021090012	3300015374	Arabidopsis Rhizosphere	VVLPDPVIHLYWAYALARAEEMFKVTRFPMGVCGAQAEREYVTLHPKKITCPFCRERAKARSGSEQER*
Ga0182036_103157681	3300016270	Soil	SQERAQVALLDPVIHFYWAHALARAEEMLKVTHFPMGVCGAQAEREYVTLDSKQITCPSCRERAKARSGSEQER
Ga0182041_103403492	3300016294	Soil	VALPDPVIHLYWAYALARAKEMFKVTLFPMGVCGAQTEREYVSLDPRRITCPFCRA
Ga0182041_117923182	3300016294	Soil	VVLLDRVIHLYWAYALARAEEMFKVTRFPPGICGAQAEREYISLDPKKITCPSCRERANARSVSEKER
Ga0182033_106976932	3300016319	Soil	VVLLDRVIHLYWAYALAGAEEMFKVTRFPPGICGAQAEREYISLDPKKITCPSCRERAKA
Ga0182035_102528223	3300016341	Soil	MVLLNPVIHLYWAHALARAEEMLKVTHFPMGVCGAQAEREHVTLDSKKITCPSCRERAKARSGSEQER
Ga0182035_111405931	3300016341	Soil	VVLLDPVIHLYWAHALARAEEMLKVAHFPMGVCGAQAEREYVTLDSKKITCPSCRERAKARSGSEQ
Ga0182035_117363911	3300016341	Soil	VVLLDRVIHLYWAYALARAEEMFKVTRFPPGICGAQAEREYISLDPKKITCPSCRERAKARSGSEKER
Ga0182032_102969581	3300016357	Soil	RAQVVLLDAVIHLYWAHALARAEEMLKVTHFPMGVCGAQAEREYVTLDSKKITCPSCRERAKARSGSEQER
Ga0182034_108291901	3300016371	Soil	VIHLYWAYALARAEEMFKVTRFPPGICGTQAEREYISLDPKKITCPFCRERAKARSGSESPASALKPPIG
Ga0182040_103899252	3300016387	Soil	VVLLDRVIHLYWAYALARAEEMFKVTRFPPGICGAQAEREYINLDPKKITCPSCRERAKARSVSEKER
Ga0182040_104868502	3300016387	Soil	VALPDPVIHLYWAHALARAKEMFKVTFFPMGVCGAQTERVYVSLDPRRITCPFCRERAKARDASEKER
Ga0182040_118539042	3300016387	Soil	MNNIVLDPVIHLYWAHALARAEEMLKVTHFPMGVCEAQAEREYVTLDSKKITCPSCRERAKARSGSEQER
Ga0182037_106315822	3300016404	Soil	REQRGGGQVALPDPVIHLYWAYALARAKEMFKVTLSPMGVCGAQAEREYVSLDPRRITCPFCRERAKARDGSEKER
Ga0182037_106906641	3300016404	Soil	VVLLDAVIHLYWAHALARAEEMLKVTHFPMGVCGAQAEREHVTLDSKKITCPSCRERAKARSGSEQER
Ga0182039_101676892	3300016422	Soil	VALPDPVIHLYWAYALARAKEMFKVTLSPMGVCGAQAEREYVSLDPRRITCPFCRERAKARDGSEKER
Ga0182039_105580342	3300016422	Soil	VVLPDRVIHLYWAYALAGAEEMFKVTRFPPGLCGAQSECEYISLDPKKISCPSCRERAKAKSVSEKER
Ga0182039_111342651	3300016422	Soil	VVLLDRVIHLYWAYALAGAEEMFKVTRFPPGICGAQAEREYISLDPKKITCPSCRERAKARSVSEKER
Ga0182038_109068673	3300016445	Soil	WAHALATAEEMLKVTQFPMGVCGAQAEREYVTLDLKKITCPSCRERAKARSGSEQER
Ga0182038_116768871	3300016445	Soil	VVLLDPVIHFYWAHALARAEEMLKVTHCPMGVCGAQAEREYVTLDSKKITCPSCRERAK
Ga0207862_10541102	3300027703	Tropical Forest Soil	VVLLDRVIHLYWAYALARAEEMFKVTRFPAGICGTQAEREYISLDPKKITCPFCRERAKARSGSEQDR
Ga0318516_102523082	3300031543	Soil	VALPDPVIHLYWAYALPRVEEMFKVTRFPPGVCGAQAEREYVTLHPKKITCPFCRERAMPRSGSEQER
Ga0318516_108642251	3300031543	Soil	VVLLDPVIHLYWAHALARAEEMLKVTHFPMGVCGAQAEREYVTLDSKKITCPSCRERAKARSGSEQER
Ga0318541_106519472	3300031545	Soil	MVLLNPVIHLYWAHALATAEEMLKVTQFPMGVCGAQAEREYVTLDSKQITCPSCRERAKARSGSEQER
Ga0318541_108060181	3300031545	Soil	VVLLDAVIHLYWAHALARAEEMLKVTHFPMGVCGAQAEREYVTLDSKKITCPSCRERAKARSGSEQER
Ga0318538_104705791	3300031546	Soil	VVLLDRVIHLYWAYALARAEEMFKVTRFPPGICGAQAEREYISLDPKKITCPSCRERAKARSVSEEER
Ga0310915_106256242	3300031573	Soil	RRTSINRWGCVGPLALTCDNREQRGGSQVALPDPVIHLYWAHALARAKEMFKVTFFPMGVCGAQTERVYVSLDPRRITCPFCRERAKARDGSEKER
Ga0318555_106750832	3300031640	Soil	EEPPRRSQERAQVVLLDAVIHLYWAHALARAEEMLKVTHFPMGVCGAQAEREYVTLDSKKITCPSCRERAKARSGSEQER
Ga0318542_101723703	3300031668	Soil	VVLLDPVIHLYWAHALATAEEMLKVTQFPMGVCGAQAEREYVTLDSKQITCPSCRERAKARSGSEQER
Ga0318574_105829192	3300031680	Soil	VVLLDPVIHLYWAHALARAEEMLKVTHFPMGVCGAQAEREYVTLDSKQITCPSCRERAKVRSGSEQER
Ga0318572_109230461	3300031681	Soil	VVLLDPVIHLYWAHALATAEEMLKVTQFPMGVCGAQAEREYVTLDSKQITCPSCRERAKARSGSEQE
Ga0318560_107686811	3300031682	Soil	IIHLYWAHALARAEEMLKVTHFPMGVCGAQAEREYVTLDSKKITCPSCRERAKARSGSEQER
Ga0318496_105486022	3300031713	Soil	VDLLDPVIHLYWAHALARAEEMLKVTHFPMGVCGAQAEREYVTLDSKKITCPSCRERAKARSGSEQER
Ga0306917_106263783	3300031719	Soil	VLLDPVIHLYWAHALATAEEMLKVTQFPMGVCGAQAEREYVTLDSKQITCPSCRERAKARSGSEQER
Ga0306917_106345391	3300031719	Soil	RAQVVLLDPIIHLYWAHALARAEEMLKVTHFPMGVCGAQAEREYVTLDSKKITCPSCRERAKARSGSEQER
Ga0306918_102447511	3300031744	Soil	VALPDPVIHLYWAHALARAKEMFKVTFFPMGVCGAQTERVYVSLDPRRITCPFCRERAKARDGSEKER
Ga0306918_111629261	3300031744	Soil	EPPRRSQERAQVVLLDAVIHLYWAHALARAEEMLKVTHFPMGVCGAQAEREYVTLDSKKITCPSCRERAKARSGSEQER
Ga0318494_103737592	3300031751	Soil	VALPDPVIHLYWAYALHRVEEMFKVTRFPPGVCGAQAEREYVTLHPKKITCPFCRERAMPRSGSEQER
Ga0318509_105502631	3300031768	Soil	VIHLYWAHALARAEEMLKVTHFPMGVCGAQAEREYVTLDSKKITCPSCRERAKARSGSEQER
Ga0318521_103400992	3300031770	Soil	VVLLDPVIHLYWAHALARAEEMLKATHFPTGVCGAQAEREYVTRDSKQITCPSCRERAKARSGSEQER
Ga0318521_107232601	3300031770	Soil	VVLLDRVIHLYWAYALARAEEMFKVTRFPPGICGAQAEREYISLDPKKITCPSCRERAKARSGSEKEI
Ga0318546_105463252	3300031771	Soil	VVLLDPIIHLYWAHALARAEEMLKVTHFPMGVCGAQAEREYVTLDSKKITCPSCRERAKARSGSEHER
Ga0318546_110990761	3300031771	Soil	VVLLDRVIHLYWAYALARAEEMFKVTRFPPGICGAQAEREYISLDPKKITCPSCRERAKARSVSEKDRWASASACLGLSPALG
Ga0318543_102292312	3300031777	Soil	VIHLYWAYALARAEEMFKVTRFPAGICGTQAEREYISLDPKKITCPFCRERAKARSGSESPASALKPPIG
Ga0318498_102030001	3300031778	Soil	VALPDPVIHLYWAYALGRVEEMFKVTRFPPGVCGAQAEREYVTLHPKKITCPFCRERA
Ga0318566_103171492	3300031779	Soil	VALPDPVIHLYWAYALPGVEEMFKVTRFPPGVCGAQAEREYVTLHPKKITCPFCRERAMPRSGSEQER
Ga0318552_101845142	3300031782	Soil	VVLLDAVIHLYWAHALARAEEMLKVTHFPMGVCGAQAEREYVTLDSKKITCPSCRERAEARSGSEQER
Ga0318503_101715732	3300031794	Soil	VVLLDPVIHLYWAHALATAEEMLKVTQFPMGVCGAQAEREYVTLDSKKITCPSCRERAKARSGSEQER
Ga0318557_100848562	3300031795	Soil	VVRPDPVIHLYWAYALPRVEEMFKVTRFPPGVCGAQAEREYVTLHPKKITCPFCRERAMPRSGSEQER
Ga0318550_100211441	3300031797	Soil	VALPDPVIHLYWAYALPRVEEMFKVTRFPPGVCGAQAEREYVTLHPKKITCPFCRERAIPRSGSEQER
Ga0318550_101258992	3300031797	Soil	LVLLDPVIHLYWAHALATAEEMLKVTQFPMGVCGAQAEREYVTLDSKKITCPSCRERAKARSGSEQER
Ga0310917_105564611	3300031833	Soil	VVLLDPVIHLYWAHALARAEEMLKVTHFPMGVCGAQAEREYVTLDSKKITCPSCRER
Ga0318512_105375982	3300031846	Soil	LVLLDPVIHLYWAHALATAEEMLKVTQFPMGVCGAQAEREYVTLDSKQITCPSCRERAKARSGSEQER
Ga0306919_102894462	3300031879	Soil	VALPDPVIHLYWAYALARAKEMFKVTLFPMGVCGAQTEREYVSLDPRRITCPFCRERAKARDGSEKER
Ga0306925_104754242	3300031890	Soil	VVRPDPVIHLYWAYALARAEEMFKVTRFPPGVCGAQAEREYVTLDPKKITCPSCRQRAKARSGSEQER
Ga0318551_102213441	3300031896	Soil	VVLLDPVIHLYWAHALATAEEMLKVTQFPMGVCGAQAEREYVTLDSKQITCPSCRERAK
Ga0318520_105610602	3300031897	Soil	VVLLDPVIHLYWAHALATAEEMLKVTQFAMGVCGAQAEREYVTLDSKQITCPSCRERAKARSGSEQER
Ga0306923_108428041	3300031910	Soil	LGSISPKSRPATARSELQVVLLDPIIHLYWAHALARAEEMLKVTHFPMGVCGAQAEHEHVTLDSKKITCPSCRERAKARSGSEQER
Ga0306923_109466342	3300031910	Soil	VVRLDPVIHLYWAYALARAEEMFKVTRFPPGVCGAQAEREYVTLDPKKITCPSCRQRAKARSGSEQER
Ga0306923_111376811	3300031910	Soil	VVLLDAVIHLYWAHALARAEEMLKVTHFPMGVCGAQAEREYVTLDSKQITCPSCRERAKVRSGSEQER
Ga0306923_120581661	3300031910	Soil	WAHALATAEEMLKVTQFPMGVCGAQAEREYVTLDSKQITCPSCRERAKARSGSEQER
Ga0306921_108983461	3300031912	Soil	SQERAQVVLLDPVIHFYWAHALARAEEMLKVTHFPMGVCGAQAEREYVTLDSKKITCPSCRERAKARSGSEQER
Ga0306921_117388281	3300031912	Soil	HLYWAYALARAEEMFKVTRFPPGICGAQAEREYISLDPKKITCPSCRERAKARSGSEKER
Ga0310916_104671651	3300031942	Soil	IHFYWAHALARAEEMLKVTHFPMGVCGAQAEREYVTLDSKKITCPSCRERAKARSGSEQE
Ga0310916_106742602	3300031942	Soil	VALPDPVIHLYWAHALARAKEMFKVTFFPMGVCGAQTERVYVSLDPRRITCPFCRERAKASNGSEKER
Ga0310916_107748791	3300031942	Soil	LLDRVIHLYWAYALARAEEMFKVTRFPPGICGAQAEREYISLDPKKITCPSCRERAKARSVSEKER
Ga0310913_105849661	3300031945	Soil	NREQRGGSQVALPDPVIHLYWAHALARAKEMFKVTFFPMGVCGAQTERVYVSLDPRRITCPFCRERAKARDGSEKER
Ga0310909_106125731	3300031947	Soil	VVLLDRVIHLYWAYALARAEEMFKVTRFPPGICGAQAEREYISLDPKKITCPSCRE
Ga0306926_107943733	3300031954	Soil	VVLLDPVIHLYWAHALATAEGMLKVTQFPMGVCGAQAEREYVTLDSKQITCPSCRERAKARSGSEQER
Ga0306926_124218451	3300031954	Soil	HLYWAYALARAEEMFKVTRFPPGICGAQAEREYISLDPKKITCPSCRERAKARSVSEKDRWASASACLGLSPALG
Ga0306926_128197751	3300031954	Soil	VVLLDRVIHLYWAYALARAEEMFKVTRFPPGICGAQAEREYISLDPKKITCPSCR
Ga0318530_104918631	3300031959	Soil	STILPNLGKYQLEELPSHSQERDQVVLLDPVIHLYWAHALARAEEMLKVTHFPMGVCGAQAEREYVTLDSKKITCPSCRERAKARSGSEQER
Ga0318549_105638841	3300032041	Soil	SQERAQVVLLDAVIHLYWAHALARAEEMLKVTHFPMGVCGAQAEREYVTLDSKKITCPSCRERAKARSGSEQER
Ga0318506_101538861	3300032052	Soil	VVLLDPVIHLYWAHALARAEEMLKVTHFPMGVCGAQAEREYVTLESEKITCPSCRERAKARSGSEQER
Ga0318575_104529651	3300032055	Soil	VVLLDRVIHLYRAYALARAEEMFKVTRFPPGICGAQAEREYISLDPKKITCPSCRERAKARSVSEEER
Ga0318504_105123831	3300032063	Soil	VVLLDAVIHLYWAHALARAEEMLKVTHFPMGVCGAQAEREYVTLDSKKITCPSCRERAKARSGSEHER
Ga0318553_105411311	3300032068	Soil	VALPDPVIHLYWAYALPRVEEMFKVTRFPPGVCGAQAEREYVTLHPKKITCPFCRERA
Ga0306924_100972174	3300032076	Soil	VVLLDPIIHLYWAHALARAEEMLKVTHFPMGVCGAQAEREYVTLDSKKITCPSCRERAKARSGSEQER
Ga0306924_116134471	3300032076	Soil	VLLDRVIHLYWAYALARAEEMFKVTRFPPGICGAQAEREYISLDPKKITCPSCRERAKARSGSEKER
Ga0306924_126214841	3300032076	Soil	VLLDRVIHLYWAYALARAEEMFKVTRFPPGICGAQAEREYISLDPKKITCPSCRERAKARSSGAGGR
Ga0318577_104500311	3300032091	Soil	VALPDPVIHLYWAYALARAKEMFKVTFFPMGVCGAQTERVYVSLDPRRITCPFCRERAKARNGSEKER
Ga0318540_104202632	3300032094	Soil	MVLLNPVIHLYWAHALARAEEMLKVTHFPMGVCGAQAEREYVTLDSKQITCPSCRERAKARSGSEQER
Ga0306920_1004302461	3300032261	Soil	VVLLDRVIHLYWAYALARAEEMFKVTRFPAGICGTQAEREYISLDPKKITCPFCRERAKARSGSESPASALKPPIG
Ga0306920_1011777362	3300032261	Soil	VVLLDRVIHLYWAYALAGAEEMFKVTRFPPGICGAQAEREYISLDPKKITCPSCRERAKARSVSEKDRWASASACLGLSPALG
Ga0306920_1019649831	3300032261	Soil	VVLLDRVIHLYWAYALARAEEMFKVTRFPPGICGAQAEREYISLDPKKITCPSCRERAKARSVSEKER
Ga0306920_1022337301	3300032261	Soil	LHIDHQREQRGGGQVALPDPVIHLYWAYALARAKEMFKVTLFPMGVCGAQAERDYVSLDPRRITCPFCRERAKARNGSEKER
Ga0306920_1023459402	3300032261	Soil	VVRLDPVIHLYWAYALARAEEMFKVTRFPPGVCGAQAEREYVTLDPKKITCPSCRERAKARSGSEQER
Ga0306920_1043533701	3300032261	Soil	VVLLDPVIHLYWAHALARAEEMLKVTHFPMGVCGAQAEREHVTLVSKKITCPSCQKRAKARSGSEQE
Ga0310914_117989722	3300033289	Soil	VALPDPVIHLYWAYALARAKEMFKVTLFPMGVCGAQAERDYVSLDPRRITCPFCRERAKARNGSEKET

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F078335

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences