NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome / Metatranscriptome Family F078333

Metagenome / Metatranscriptome Family F078333

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F078333
Family Type Metagenome / Metatranscriptome
Number of Sequences 116
Average Sequence Length 50 residues
Representative Sequence AAVEADDMDTVREFAFQSRLGQWNTIDIYQVSTLEEALTKVNELPTIY
Number of Associated Samples 100
Number of Associated Scaffolds 116

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 6.03 %
% of genes near scaffold ends (potentially truncated) 85.34 %
% of genes from short scaffolds (< 2000 bps) 89.66 %
Associated GOLD sequencing projects 97
AlphaFold2 3D model prediction Yes
3D model pTM-score0.37

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Bacteria (93.103 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil
(11.207 % of family members)
Environment Ontology (ENVO) Unclassified
(21.552 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(50.000 % of family members)


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Multiple Sequence Alignments

Select alignment to view:      

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 40.79%    β-sheet: 0.00%    Coil/Unstructured: 59.21%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.37
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 116 Family Scaffolds
PF00106adh_short 2.59
PF00196GerE 2.59
PF01872RibD_C 2.59
PF01894UPF0047 1.72
PF00072Response_reg 0.86
PF07452CHRD 0.86
PF13561adh_short_C2 0.86
PF00583Acetyltransf_1 0.86
PF01546Peptidase_M20 0.86
PF13646HEAT_2 0.86
PF01209Ubie_methyltran 0.86
PF13396PLDc_N 0.86
PF02371Transposase_20 0.86
PF04191PEMT 0.86
PF08940DUF1918 0.86
PF00230MIP 0.86
PF02350Epimerase_2 0.86
PF00211Guanylate_cyc 0.86
PF11799IMS_C 0.86
PF13659Obsolete Pfam Family 0.86
PF08031BBE 0.86
PF03098An_peroxidase 0.86
PF01757Acyl_transf_3 0.86
PF04828GFA 0.86
PF08402TOBE_2 0.86
PF03575Peptidase_S51 0.86
PF01548DEDD_Tnp_IS110 0.86
PF08240ADH_N 0.86
PF04073tRNA_edit 0.86
PF02559CarD_CdnL_TRCF 0.86
PF00300His_Phos_1 0.86
PF10041DUF2277 0.86

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 116 Family Scaffolds
COG0262Dihydrofolate reductaseCoenzyme transport and metabolism [H] 2.59
COG1985Pyrimidine reductase, riboflavin biosynthesisCoenzyme transport and metabolism [H] 2.59
COG0432Thiamin phosphate synthase YjbQ, UPF0047 familyCoenzyme transport and metabolism [H] 1.72
COG3547TransposaseMobilome: prophages, transposons [X] 1.72
COG0277FAD/FMN-containing lactate dehydrogenase/glycolate oxidaseEnergy production and conversion [C] 0.86
COG0381UDP-N-acetylglucosamine 2-epimeraseCell wall/membrane/envelope biogenesis [M] 0.86
COG0580Glycerol uptake facilitator or related aquaporin (Major Intrinsic protein Family)Carbohydrate transport and metabolism [G] 0.86
COG0707UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferaseCell wall/membrane/envelope biogenesis [M] 0.86
COG2114Adenylate cyclase, class 3Signal transduction mechanisms [T] 0.86
COG2226Ubiquinone/menaquinone biosynthesis C-methylase UbiE/MenGCoenzyme transport and metabolism [H] 0.86
COG22272-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylaseCoenzyme transport and metabolism [H] 0.86
COG3791Uncharacterized conserved proteinFunction unknown [S] 0.86

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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms93.10 %
UnclassifiedrootN/A6.90 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
2124908045|KansclcFeb2_ConsensusfromContig1299244All Organisms → cellular organisms → Bacteria561Open in IMG/M
2124908045|KansclcFeb2_ConsensusfromContig131254All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium559Open in IMG/M
2166559005|cont_contig41084All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium937Open in IMG/M
2170459015|G14TP7Y01BU37IAll Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium554Open in IMG/M
3300000956|JGI10216J12902_111081472All Organisms → cellular organisms → Bacteria1030Open in IMG/M
3300000956|JGI10216J12902_114881109All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia2008Open in IMG/M
3300004633|Ga0066395_10883363All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium540Open in IMG/M
3300005164|Ga0066815_10034867All Organisms → cellular organisms → Bacteria774Open in IMG/M
3300005329|Ga0070683_101893132All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium URHD0059573Open in IMG/M
3300005332|Ga0066388_100011577All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria6984Open in IMG/M
3300005332|Ga0066388_108829438All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium500Open in IMG/M
3300005337|Ga0070682_100107069All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1856Open in IMG/M
3300005364|Ga0070673_101421363All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium653Open in IMG/M
3300005447|Ga0066689_10605721All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria690Open in IMG/M
3300005456|Ga0070678_101422131All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales648Open in IMG/M
3300005542|Ga0070732_10995468All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium513Open in IMG/M
3300005560|Ga0066670_10558553All Organisms → cellular organisms → Bacteria → Terrabacteria group699Open in IMG/M
3300005566|Ga0066693_10465877All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium519Open in IMG/M
3300005764|Ga0066903_100010522All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia8844Open in IMG/M
3300005764|Ga0066903_100077175All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia4317Open in IMG/M
3300005764|Ga0066903_100269983All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria2652Open in IMG/M
3300005764|Ga0066903_101528560All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1262Open in IMG/M
3300006028|Ga0070717_11693624All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium572Open in IMG/M
3300006046|Ga0066652_101517934All Organisms → cellular organisms → Bacteria → Terrabacteria group620Open in IMG/M
3300006854|Ga0075425_102539195All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium URHD0059567Open in IMG/M
3300006880|Ga0075429_100925548All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium763Open in IMG/M
3300006904|Ga0075424_101483728All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria720Open in IMG/M
3300006954|Ga0079219_10626852All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium795Open in IMG/M
3300006954|Ga0079219_12488344All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria503Open in IMG/M
3300009012|Ga0066710_101657308All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium976Open in IMG/M
3300009038|Ga0099829_11658292All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium527Open in IMG/M
3300009088|Ga0099830_10692818All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium838Open in IMG/M
3300009094|Ga0111539_12517361Not Available597Open in IMG/M
3300009147|Ga0114129_10194584All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium2751Open in IMG/M
3300010360|Ga0126372_12709173Not Available548Open in IMG/M
3300010375|Ga0105239_10522200All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1351Open in IMG/M
3300010398|Ga0126383_13133711All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium540Open in IMG/M
3300010398|Ga0126383_13483913All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium514Open in IMG/M
3300011003|Ga0138514_100144678All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium527Open in IMG/M
3300012011|Ga0120152_1010982All Organisms → cellular organisms → Bacteria3854Open in IMG/M
3300012204|Ga0137374_10861726All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium668Open in IMG/M
3300012210|Ga0137378_10995754All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium752Open in IMG/M
3300012357|Ga0137384_10942883All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium695Open in IMG/M
3300012359|Ga0137385_10297750All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1389Open in IMG/M
3300012519|Ga0157352_1099818All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria513Open in IMG/M
3300012951|Ga0164300_10912157All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium556Open in IMG/M
3300012961|Ga0164302_11631020All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium537Open in IMG/M
3300012971|Ga0126369_13667272All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium503Open in IMG/M
3300012989|Ga0164305_11386979All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium618Open in IMG/M
3300013768|Ga0120155_1081082All Organisms → cellular organisms → Bacteria → Terrabacteria group921Open in IMG/M
3300013772|Ga0120158_10033422All Organisms → cellular organisms → Bacteria → Terrabacteria group3875Open in IMG/M
3300013772|Ga0120158_10156133All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1254Open in IMG/M
3300013772|Ga0120158_10247218All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium895Open in IMG/M
3300014166|Ga0134079_10390565All Organisms → cellular organisms → Bacteria644Open in IMG/M
3300014968|Ga0157379_11468922All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium662Open in IMG/M
3300014969|Ga0157376_12256201All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium583Open in IMG/M
3300015265|Ga0182005_1261957All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium538Open in IMG/M
3300015356|Ga0134073_10209977All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria651Open in IMG/M
3300015357|Ga0134072_10077399All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium981Open in IMG/M
3300015371|Ga0132258_10842260All Organisms → cellular organisms → Bacteria2314Open in IMG/M
3300015371|Ga0132258_11001647All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria2111Open in IMG/M
3300015372|Ga0132256_101384416All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium815Open in IMG/M
3300015373|Ga0132257_102719731All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium644Open in IMG/M
3300015374|Ga0132255_105187759All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium551Open in IMG/M
3300016357|Ga0182032_11691884All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium551Open in IMG/M
3300016371|Ga0182034_11868379All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium530Open in IMG/M
3300016404|Ga0182037_10890129All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium771Open in IMG/M
3300017656|Ga0134112_10230951All Organisms → cellular organisms → Bacteria730Open in IMG/M
3300017959|Ga0187779_10007546All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria6300Open in IMG/M
3300017959|Ga0187779_10954997All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium593Open in IMG/M
3300017961|Ga0187778_10356859All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria953Open in IMG/M
3300017973|Ga0187780_11047542All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium595Open in IMG/M
3300017974|Ga0187777_11154182All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria565Open in IMG/M
3300018032|Ga0187788_10373441All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium594Open in IMG/M
3300018032|Ga0187788_10405093All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium574Open in IMG/M
3300018032|Ga0187788_10515924All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium519Open in IMG/M
3300018058|Ga0187766_10869692All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium634Open in IMG/M
3300018060|Ga0187765_10275223All Organisms → cellular organisms → Bacteria1001Open in IMG/M
3300018061|Ga0184619_10303487All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia732Open in IMG/M
3300018061|Ga0184619_10364015All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium659Open in IMG/M
3300018081|Ga0184625_10192239Not Available1069Open in IMG/M
3300018089|Ga0187774_11442932All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria506Open in IMG/M
3300018433|Ga0066667_10018136All Organisms → cellular organisms → Bacteria3656Open in IMG/M
3300019255|Ga0184643_1107087All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium519Open in IMG/M
3300019361|Ga0173482_10192965All Organisms → cellular organisms → Bacteria → Terrabacteria group828Open in IMG/M
3300019873|Ga0193700_1043158All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium724Open in IMG/M
3300019875|Ga0193701_1030405All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1109Open in IMG/M
3300019881|Ga0193707_1071733Not Available1074Open in IMG/M
3300021415|Ga0193694_1046499All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium603Open in IMG/M
3300025928|Ga0207700_10482189All Organisms → cellular organisms → Bacteria1096Open in IMG/M
3300025929|Ga0207664_10199642All Organisms → cellular organisms → Bacteria1726Open in IMG/M
3300025929|Ga0207664_10490691All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1099Open in IMG/M
3300025933|Ga0207706_11530072All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia543Open in IMG/M
3300025939|Ga0207665_11038615All Organisms → cellular organisms → Bacteria652Open in IMG/M
3300025944|Ga0207661_10668024All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria955Open in IMG/M
3300026075|Ga0207708_10879868All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium774Open in IMG/M
3300026308|Ga0209265_1157045All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium588Open in IMG/M
3300027907|Ga0207428_10286271All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium1222Open in IMG/M
3300028819|Ga0307296_10737945Not Available538Open in IMG/M
3300028824|Ga0307310_10168022Not Available1021Open in IMG/M
3300028884|Ga0307308_10094974All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1418Open in IMG/M
3300028885|Ga0307304_10108788All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1116Open in IMG/M
3300031421|Ga0308194_10302698Not Available554Open in IMG/M
3300031446|Ga0170820_17304497All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium602Open in IMG/M
3300031765|Ga0318554_10639749All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium598Open in IMG/M
3300031769|Ga0318526_10380596All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium577Open in IMG/M
3300031805|Ga0318497_10458351All Organisms → cellular organisms → Bacteria714Open in IMG/M
3300031819|Ga0318568_10405778All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium849Open in IMG/M
3300031893|Ga0318536_10279889All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium847Open in IMG/M
3300031962|Ga0307479_11538044All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium622Open in IMG/M
3300032008|Ga0318562_10424155All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium773Open in IMG/M
3300032089|Ga0318525_10599450Not Available562Open in IMG/M
3300032205|Ga0307472_100736706All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium892Open in IMG/M
3300032782|Ga0335082_10393800All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1250Open in IMG/M
3300032805|Ga0335078_10398334All Organisms → cellular organisms → Bacteria1808Open in IMG/M
3300034817|Ga0373948_0093729All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium700Open in IMG/M


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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil11.21%
Tropical PeatlandEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland9.48%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil7.76%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil6.03%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil6.03%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil5.17%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere5.17%
PermafrostEnvironmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost4.31%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil3.45%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil3.45%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere3.45%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere3.45%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment2.59%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil2.59%
Corn RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere2.59%
Agricultural SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil1.72%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil1.72%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil1.72%
SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Soil1.72%
Agricultural SoilEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil1.72%
Groundwater SedimentEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment0.86%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil0.86%
Surface SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil0.86%
Unplanted SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Unplanted Soil0.86%
Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil0.86%
SoilEnvironmental → Terrestrial → Agricultural Field → Unclassified → Unclassified → Soil0.86%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere0.86%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere0.86%
RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere0.86%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere0.86%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere0.86%
Rhizosphere SoilHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere Soil0.86%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere0.86%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere0.86%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere0.86%
Switchgrass, Maize And Mischanthus LitterEngineered → Solid Waste → Grass → Composting → Unclassified → Switchgrass, Maize And Mischanthus Litter0.86%
SimulatedEngineered → Modeled → Simulated Communities (Sequence Read Mixture) → Unclassified → Unclassified → Simulated0.86%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
2124908045Soil microbial communities from Great Prairies - Kansas assembly 1 01_01_2011EnvironmentalOpen in IMG/M
2166559005Simulated microbial communities from Lyon, FranceEngineeredOpen in IMG/M
2170459015Litter degradation PV4EngineeredOpen in IMG/M
3300000956Soil microbial communities from Great Prairies - Kansas, Native Prairie soilEnvironmentalOpen in IMG/M
3300004633Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBioEnvironmentalOpen in IMG/M
3300005164Soil and rhizosphere microbial communities from Laval, Canada - mgLACEnvironmentalOpen in IMG/M
3300005329Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaGEnvironmentalOpen in IMG/M
3300005332Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300005337Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaGEnvironmentalOpen in IMG/M
3300005364Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaGHost-AssociatedOpen in IMG/M
3300005447Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138EnvironmentalOpen in IMG/M
3300005456Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaGHost-AssociatedOpen in IMG/M
3300005542Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1EnvironmentalOpen in IMG/M
3300005560Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_119EnvironmentalOpen in IMG/M
3300005566Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_142EnvironmentalOpen in IMG/M
3300005764Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)EnvironmentalOpen in IMG/M
3300006028Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaGEnvironmentalOpen in IMG/M
3300006046Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101EnvironmentalOpen in IMG/M
3300006854Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4Host-AssociatedOpen in IMG/M
3300006880Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3Host-AssociatedOpen in IMG/M
3300006904Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3Host-AssociatedOpen in IMG/M
3300006954Agricultural soil microbial communities from Georgia to study Nitrogen management - GA ControlEnvironmentalOpen in IMG/M
3300009012Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159EnvironmentalOpen in IMG/M
3300009038Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaGEnvironmentalOpen in IMG/M
3300009088Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaGEnvironmentalOpen in IMG/M
3300009094Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)Host-AssociatedOpen in IMG/M
3300009147Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)Host-AssociatedOpen in IMG/M
3300010360Tropical forest soil microbial communities from Panama - MetaG Plot_6EnvironmentalOpen in IMG/M
3300010375Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaGHost-AssociatedOpen in IMG/M
3300010398Tropical forest soil microbial communities from Panama - MetaG Plot_35EnvironmentalOpen in IMG/M
3300011003Agricultural soil microbial communities from Tamara ranch near Red Deer, Alberta, Canada - d1t9i015EnvironmentalOpen in IMG/M
3300012011Permafrost microbial communities from Nunavut, Canada - A30_65cm_6MEnvironmentalOpen in IMG/M
3300012204Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_100_16 metaGEnvironmentalOpen in IMG/M
3300012210Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaGEnvironmentalOpen in IMG/M
3300012357Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaGEnvironmentalOpen in IMG/M
3300012359Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaGEnvironmentalOpen in IMG/M
3300012519Unplanted soil (control) microbial communities from North Carolina - M.Soil.7.yng.070610EnvironmentalOpen in IMG/M
3300012951Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MGEnvironmentalOpen in IMG/M
3300012961Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MGEnvironmentalOpen in IMG/M
3300012971Tropical forest soil microbial communities from Panama - MetaG Plot_1EnvironmentalOpen in IMG/M
3300012989Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MGEnvironmentalOpen in IMG/M
3300013768Permafrost microbial communities from Nunavut, Canada - A35_65cm_0MEnvironmentalOpen in IMG/M
3300013772Permafrost microbial communities from Nunavut, Canada - A10_80_0.25MEnvironmentalOpen in IMG/M
3300014166Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09182015EnvironmentalOpen in IMG/M
3300014968Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaGHost-AssociatedOpen in IMG/M
3300014969Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaGHost-AssociatedOpen in IMG/M
3300015265Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-103_1 MetaGHost-AssociatedOpen in IMG/M
3300015356Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_5_24_1 metaGEnvironmentalOpen in IMG/M
3300015357Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_5_0_1 metaGEnvironmentalOpen in IMG/M
3300015371Combined assembly of cpr5 and col0 rhizosphere and soilHost-AssociatedOpen in IMG/M
3300015372Soil combined assemblyHost-AssociatedOpen in IMG/M
3300015373Combined assembly of cpr5 rhizosphereHost-AssociatedOpen in IMG/M
3300015374Col-0 rhizosphere combined assemblyHost-AssociatedOpen in IMG/M
3300016357Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000EnvironmentalOpen in IMG/M
3300016371Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172EnvironmentalOpen in IMG/M
3300016404Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082EnvironmentalOpen in IMG/M
3300017656Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_11112015EnvironmentalOpen in IMG/M
3300017959Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_10_MGEnvironmentalOpen in IMG/M
3300017961Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_20_MGEnvironmentalOpen in IMG/M
3300017973Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_20_MGEnvironmentalOpen in IMG/M
3300017974Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_10_MGEnvironmentalOpen in IMG/M
3300018032Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_BV01_MP10_20_MGEnvironmentalOpen in IMG/M
3300018058Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_20_MGEnvironmentalOpen in IMG/M
3300018060Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_10_MGEnvironmentalOpen in IMG/M
3300018061Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_b1EnvironmentalOpen in IMG/M
3300018081Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b1EnvironmentalOpen in IMG/M
3300018089Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP05_20_MGEnvironmentalOpen in IMG/M
3300018433Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116EnvironmentalOpen in IMG/M
3300019255Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300019361Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S133-311R-2 (version 2)EnvironmentalOpen in IMG/M
3300019873Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U3s1EnvironmentalOpen in IMG/M
3300019875Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U3s2EnvironmentalOpen in IMG/M
3300019881Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U3c2EnvironmentalOpen in IMG/M
3300021415Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L3s1EnvironmentalOpen in IMG/M
3300025928Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025929Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025933Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025939Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025944Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes)EnvironmentalOpen in IMG/M
3300026075Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300026308Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_103 (SPAdes)EnvironmentalOpen in IMG/M
3300027907Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes)Host-AssociatedOpen in IMG/M
3300028819Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_153EnvironmentalOpen in IMG/M
3300028824Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_197EnvironmentalOpen in IMG/M
3300028884Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_195EnvironmentalOpen in IMG/M
3300028885Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_185EnvironmentalOpen in IMG/M
3300031421Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_195 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300031446Fir Summer Coassembly Site 11 - Champenoux / Amance forestEnvironmentalOpen in IMG/M
3300031765Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f22EnvironmentalOpen in IMG/M
3300031769Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f24EnvironmentalOpen in IMG/M
3300031805Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f23EnvironmentalOpen in IMG/M
3300031819Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f21EnvironmentalOpen in IMG/M
3300031893Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f28EnvironmentalOpen in IMG/M
3300031962Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515EnvironmentalOpen in IMG/M
3300032008Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f18EnvironmentalOpen in IMG/M
3300032089Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f23EnvironmentalOpen in IMG/M
3300032205Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05EnvironmentalOpen in IMG/M
3300032782Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.1EnvironmentalOpen in IMG/M
3300032805Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.2EnvironmentalOpen in IMG/M
3300034817Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_1Host-AssociatedOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
KansclcFeb2_023293902124908045SoilSTVREFAFQSRLGQWNTVEIYQTSTLEEALTKVNELPTIY
KansclcFeb2_029294202124908045SoilVPMNNHMVFAAVEADDMSTVREFAFQSRLGQWNTVEIYQTATLEEALTKVNELPTIY
cont_0084.000032702166559005SimulatedLRPSKPTTWTVREFAFQSRLGQWNTLELYQVSTLEEALTKVTELPTIYS
4PV_025027502170459015Switchgrass, Maize And Mischanthus LitterVEADDANAVREFAFQGRLGQWNTVEIFQTSTLEEALTRVQELETIY
JGI10216J12902_11108147213300000956SoilAVEADDMSTVREFAFQSRLGQWNTVEIYQTATLEEALTKVDELPTIY*
JGI10216J12902_11488110913300000956SoilLATHVPMNNHMVFAAVEADDMSTVREFAFQSRLGQWNTIEIYQVSTLDEALTKVNELPTIY*
Ga0066395_1088336323300004633Tropical Forest SoilDMATVREFAFQSRLGQWNTIEIYQVATLEEALTKVNELPTIYA*
Ga0066815_1003486713300005164SoilADDMSTVREFAFQSRLGQWNTIEIYQTSTLEEALTKVTELPTIY*
Ga0070683_10189313213300005329Corn RhizosphereGVNLLATYVPMNNHMVFAAVEAKDMDSVREFAFQSRLGQWNTLEIYQVSTLEEALTKINELPTIYK*
Ga0066388_100011577123300005332Tropical Forest SoilMNNHMVFAAVEADDMDSVREFAFQSRLGQWNTIELYQVSTLEEALTKVTELPTIYG*
Ga0066388_10882943813300005332Tropical Forest SoilDSVREFTFQSRLGQWKTIEIYEVSTLGDALTKVNELPTIY*
Ga0070682_10010706933300005337Corn RhizospherePMNNHMVFAAVEAKDMDSVREFAFQSRLGQWNTLEIYQVSTLEEALTKINELPTIYK*
Ga0070673_10142136333300005364Switchgrass RhizosphereVEADDMDTVREFAFQSRLGQWNTVEIYQTSTLEQALTKVNELPTIY*
Ga0066689_1060572123300005447SoilQVFVAVEADDANAVREFAFQGRLGQWNTIEILQTSTLEEALTRVQELETIY*
Ga0070678_10142213113300005456Miscanthus RhizosphereVPMNNHMVFAAVEADDMATVREFAFQSRLGQWNTVEIYQVSTLEEALTKVNELPTIYE*
Ga0070732_1099546813300005542Surface SoilMTNHQVYVAVEADDANAVREFAFQGRLGQWNTIDIYQTSTLEEALTRVQELPTIY*
Ga0066670_1055855313300005560SoilVREFAWQGRLSQWNTVEIYAVSTLEEALGRVQELPTVY*
Ga0066693_1046587723300005566SoilMTSVREFAFQSGLCQWNTVETYQVSTLEEALTKINELPAI*
Ga0066903_10001052213300005764Tropical Forest SoilKLAATYVPMNNHMVFAAVEANDMASVREFAFQSRLGQWNTIDIYQVATLEEALTKVNELPTIYA*
Ga0066903_10007717543300005764Tropical Forest SoilVKVNATYVPMNNHMVFAAVEADDMKTVREFAFQSRLGQWNTIDIYQVSTLEEALTKVNELPTIY*
Ga0066903_10026998323300005764Tropical Forest SoilMNNHQVYAAVEADDMGTVREFAFQSRLGQWNTIDIYQVATLEEALTKVNELPTIYG*
Ga0066903_10152856043300005764Tropical Forest SoilATYVPMTNHQVYVAVEADDANAVREFAFQGRLGQWNTVEIFQTSTLEEALTRVQELPTIY
Ga0070717_1169362423300006028Corn, Switchgrass And Miscanthus RhizosphereVREFAFQGRLSQWNTVEILQTSTLEEALGRVQEMEMIY*
Ga0066652_10151793423300006046SoilMVFVAVEADDADAVREFTFQGRLGQWNTIEIYQTSTLEEALTRVNELPTIY*
Ga0075425_10253919513300006854Populus RhizosphereNHMVFAAVEADDMATVREFAFQSRLGQWNTIEIYQVSTLEEALTKVNELPTIYQ*
Ga0075429_10092554823300006880Populus RhizosphereATVREFAFQSRLGQWNTIDIYQVATLEEALTKASELPTIYG*
Ga0075424_10148372823300006904Populus RhizosphereLGVKLLATYVPMNNHMVFAAVEADDMDTVREFAFQSRLGQWNTIDIYQVSTLEEALTKVNELPTIY*
Ga0079219_1062685243300006954Agricultural SoilDMSTVREFAWQPGSASDTVEIYQTATLEEALTKVNELPTIY*
Ga0079219_1248834423300006954Agricultural SoilLLATYVPMNNHMVFVAVEADDMSTVREFAFQARLGQWNTVEIYQTSTLEEALTKVNDLPTIY*
Ga0066710_10165730813300009012Grasslands SoilDANSVREFAFQGRLGQWNTIEILQTSTLEEALTRVQELPTIY
Ga0099829_1165829213300009038Vadose Zone SoilREFAFQGRLGQWNTIDIFQTSTLEEALTRVQELPTIY*
Ga0099830_1069281813300009088Vadose Zone SoilFAFQGRLGQWNTIEIYQTSTLEEALTRVQELPTIY*
Ga0111539_1251736123300009094Populus RhizosphereIIVAVEADDANSVREFAWQGRLGQWNTVEIIQTVTFEEALTRVQELPTIF*
Ga0114129_1019458413300009147Populus RhizosphereTYVPMTNHQVFVAVEADDANAVREFTFQGRVSQWNTVDILQVSTLEEALARVQELPTVY*
Ga0126372_1270917323300010360Tropical Forest SoilVPMTSHHIYAAVEAEDANSVREFAWQGRLAQWNKVEIFQTSTLEEALTRVQEMPAVY*
Ga0105239_1052220023300010375Corn RhizosphereFQSRLGQWNTIEIYQVSTLEEALTKVNELPTIYD*
Ga0126383_1313371123300010398Tropical Forest SoilVREVARQGRLARWNKVEFFQTSSLEEALTRVQELPAVF*
Ga0126383_1348391323300010398Tropical Forest SoilVEAGDMDAVREFAFQSRLGQWNTIELYQVSTLEEALTKVTELPTIYG*
Ga0138514_10014467813300011003SoilVLVAVEANDANSVREFAFQGRLGQWNTVEILQTSTLEEALTRVQELETIY*
Ga0120152_101098263300012011PermafrostDKVREFTFQGRLSQWNTCEIYQTSTLEEALTRVQELPTVF*
Ga0137374_1086172633300012204Vadose Zone SoilGVKILATYVPMTNHQVFVAVEADDANSVREFAFQGRLGQWNTVEILQTSTLEEALTRVQELPTIY*
Ga0137378_1099575413300012210Vadose Zone SoilMNNHMVFAAVEADDMSTVREFAWQSRLGQWNTVEIYQTATLEEALTKVNELPTIY*
Ga0137384_1094288323300012357Vadose Zone SoilADDADAVREFTFQGRLGQWNTIEIYQTSTLEEALTRVEELPTIY*
Ga0137385_1029775023300012359Vadose Zone SoilPMTNHQVFVAVEADDANAVREFAFQGRLGQWNTVEILQTSTLEEALTRVQELETIY*
Ga0157352_109981813300012519Unplanted SoilNHMVFAAVEADDANSVREFAFQSRLSQWNTIEIYQTSTLEEALTKVNELPTIY*
Ga0164300_1091215733300012951SoilAVEADDMATVREFAFQSRLGQWNTIEIYQTSTLEEALTKVNELPAIY*
Ga0164302_1163102013300012961SoilMTNHHVFVAVEADDANSVREFAFQGRLGQWNTIEIRQVSTLEEALTRVQELPTIY*
Ga0126369_1366727213300012971Tropical Forest SoilAAVEADDMDTVREFAFQSRLGQWNTIDIYQVSTLEEALTKVNELPTIY*
Ga0164305_1138697923300012989SoilVEGDDMATVREFAFQARLSQWNTIDIYQVSTLEEALTKVNELPTIY*
Ga0120155_108108213300013768PermafrostVREFAFQGRLGQWNTIEIYQTSTLEEALTRVQELPTIY
Ga0120158_1003342253300013772PermafrostVREFAFQGRLGQWNTIEIYQTSTLEEALTRVQELPTIY*
Ga0120158_1015613323300013772PermafrostMNNHMVFAAVEGDDMATVREFAFQSRLGQWNTIDIYQVATLEEALTKVNELPTIYA*
Ga0120158_1024721833300013772PermafrostEADDADKVREFTFQGRLSQWNTVEIYQTSTLEEALTRVQELPTIF*
Ga0134079_1039056513300014166Grasslands SoilADDMDSVREFAFQSRLGQWNTLELYQVSTLEEALTKVTELPTIYG*
Ga0157379_1146892213300014968Switchgrass RhizosphereDMATVREFAFQSRFGQWNTVEIYQVSTLEEALTKVNELPTIYE*
Ga0157376_1225620113300014969Miscanthus RhizosphereHMVVAAVEADDMDKVREFAFQGRLSQWNTVEIYQTSTLEEALGRVQELPTIY*
Ga0182005_126195723300015265RhizosphereATYVPMNNHMVFAAVEADDMATVREFAFQSRLGQWNTVEIYQTSTLEEALTKVNELPTIY
Ga0134073_1020997713300015356Grasslands SoilVEAEDMATVREFAFQSRLGQWNTIEIYQTSTLEEALTKVNDLPTIY*
Ga0134072_1007739913300015357Grasslands SoilMVFAAVEAEDMATVREFAFQSRLGQWNTIEIYQTSTLEEALTKVNDLPTIY*
Ga0132258_1084226023300015371Arabidopsis RhizosphereMNNHMVFAAVEADDMATVREFAFQSRFGQWNTVEIYQVSTLEEALTKVNELPTIYE*
Ga0132258_1100164753300015371Arabidopsis RhizosphereFAAVEADDMATVREFAFQSRLGQWNTVEIYQVSTLEEALTKVNELPTIYE*
Ga0132256_10138441613300015372Arabidopsis RhizosphereMTNHMVVAAVEADDMDKVREFAFQGRLSQWNTVEIYQTSTLEDALTRVQELPTIY*
Ga0132257_10271973123300015373Arabidopsis RhizosphereVEADDMATVREFAFQSRLGQWNTVEIYQVSTLEEALTKVNELPTIYE*
Ga0132255_10518775933300015374Arabidopsis RhizosphereVEADDMDTVREFAFQSRLGQWNTIDIYQVSTLEEALTKVNELPTIY*
Ga0182032_1169188413300016357SoilPMNNHMVFAAVEADDMASVREFAFQSRLGQWNTIEIYQVSTLEEALTKINELPTIYQ
Ga0182034_1186837913300016371SoilNNHMVFVAVEADDMATVREFAFQARLGQWNTVEIYQVSTLEEALTKVNELPTIY
Ga0182037_1089012923300016404SoilLSATYVPMNNHMVFAAVEADDMASVREFAFQSRLGQWNTIEIYQVSTLEEALTKINELPTIYQ
Ga0134112_1023095123300017656Grasslands SoilTYVPMNNHMVFAAVEADDMDSVREFAFQSRLGQWNTLELYQVSTLEEALMKVTELPTIYG
Ga0187779_1000754613300017959Tropical PeatlandATYVPMNNHMVFVAVEADDMNTVREFAFQSRLGQWNTVDIYQVSTLEEALTKVNELPTIY
Ga0187779_1095499713300017959Tropical PeatlandDMSSVREFVFQSRLGQWNTLDIYQVSTLEEALTKVTELPTIY
Ga0187778_1035685913300017961Tropical PeatlandANDMDTVREFAFQSRLGQWNTLELYQVSTLEEALTKVEELPTIYS
Ga0187780_1104754223300017973Tropical PeatlandDDMNTVREFAFQSRLGQWNTIDIYQVSTLEEALTKVNELPTIY
Ga0187777_1115418213300017974Tropical PeatlandMDTVREFAFQSRLGQWNTLELYQVSTLEEALTKVEELPTIYG
Ga0187788_1037344123300018032Tropical PeatlandMNNHMVFAAVEANDMDSVREFAFQSRLGQWNTLKIYQVSTLEEALTKINDLPTIYK
Ga0187788_1040509323300018032Tropical PeatlandVAVEADDANQVREFTFQGRLSQWNTVEIYQTSTLEEALTRVQELPTIY
Ga0187788_1051592413300018032Tropical PeatlandLLATYVPMNNHMVFAAVEADDMASVREFAFQSRLGQWNTIEIYQVSTLEEALTKVNELPTIYE
Ga0187766_1086969213300018058Tropical PeatlandPMNNHMVFAAVEADDMDTVREFAFQSRLGQWNTVEIYQVSTLEEALTKVNELPTIY
Ga0187765_1027522333300018060Tropical PeatlandKLLATYVPMNNHMVFAAVEADDMDTVREFAFQSRLGQWNTIELYQVSTLEEALTKVTELPTIYG
Ga0184619_1030348713300018061Groundwater SedimentQVFVAVEADDANAVREFAFQGRLGQWNTIDILQTSTLEEALTRVQELETIY
Ga0184619_1036401523300018061Groundwater SedimentEADDADSVRELAFQGRLSQWNTVEIYQTSTLEEALGRVQEMPMIY
Ga0184625_1019223923300018081Groundwater SedimentVPMINHMVYVAVEADDADAVRELAIQGRLAQWNTVEVHQTSTLEEALTRVQEMPMVY
Ga0187774_1144293213300018089Tropical PeatlandDDMDSVREFAFQARLGQWNTLEIYQVSTLEEALTRVNELPPIY
Ga0066667_1001813663300018433Grasslands SoilVFAAVEADDMDSVREFAFQSRLGQWNTLELYQVSTLEEALTKVTELPTIYG
Ga0184643_110708713300019255Groundwater SedimentFAFQGRLGQWNTIEILQVSTLEEALTRVQELPTIY
Ga0173482_1019296513300019361SoilPMNNHMVFAAVEADDMASVREFAFQSRLGQWNTIELYQVSTLEEALTKVTELPTIYS
Ga0193700_104315823300019873SoilVRELAIQGRLAQWNTVEVHQTSTLEEALTRVQDMPMVY
Ga0193701_103040513300019875SoilVPMNNHMVFAAVEADDMDSVREFAFQSRLGQWNTLELYQVSTLEDALAKVTELPTIYS
Ga0193707_107173313300019881SoilRELAIQGRLAQWNTVEVHQTSTLEEALTRVQEMPMVY
Ga0193694_104649913300021415SoilDDADAVRELAIQGRLAQWNTVEVHQTSTLEEALTRVQDMPMVY
Ga0207700_1048218933300025928Corn, Switchgrass And Miscanthus RhizosphereFAFLGRLSQWNTVEIYQTSTLEEALTRIQELPTIY
Ga0207664_1019964213300025929Agricultural SoilVRELAFQGRLSQWNTVDILQTSTLEEALGRAQELPTIY
Ga0207664_1049069143300025929Agricultural SoilEADDMDKVREFAFQGRLSQWNTVEIYQTSTLEEALGRVQELPTIY
Ga0207706_1153007223300025933Corn RhizosphereMLAFRAAVEAKDMDSVREFAFQSRLGQWNTLEIYQVSTLEEALTKINELPTIYK
Ga0207665_1103861523300025939Corn, Switchgrass And Miscanthus RhizosphereVVFAAVEADSVDAVREFTFQGRLTQWNTVEIYRTSSLEEALTRVQELPTLY
Ga0207661_1066802413300025944Corn RhizosphereVKLLATYVPMNNHMVFAAVEADDMDTVREFAFQSRLGQWNTIDIYQVSTLEEALTKVNELPTIY
Ga0207708_1087986823300026075Corn, Switchgrass And Miscanthus RhizosphereDMDKVREFAFQGRLSQWNTVEIYQTSTLEEALTRVQELPTIY
Ga0209265_115704513300026308SoilGVKLLATYVPMNNHMVFAAVEADDMDSVREFAFQSRLGQWNTLELYQVSTLEEALTKVTELPTIYG
Ga0207428_1028627113300027907Populus RhizosphereEADDANSVREFAWQGRLGQWNTVEIIQTVTFEEALTRVQELPTIF
Ga0307296_1073794513300028819SoilYVAVEADDADAVRELAIQGRLAQWNTVEVHQTSTLEEALTRVQDMPMVY
Ga0307310_1016802223300028824SoilVFAAVEADDMDSVREFAFQSRLGQWNTLDLYQVSTLEEALTKVTELPTIYG
Ga0307308_1009497433300028884SoilKLLATYVPMNNHMVFAAVEADDMDSVREFAFQSRLGQWNTLELYQVSTLEEALTKVTELPTIYG
Ga0307304_1010878813300028885SoilNNHMVFAAVEADDMDSVREFAFQSRLGQWNTLDLYQVSTLEEALTKVTELPTIYG
Ga0308194_1030269823300031421SoilVEADDADAVRELAIQGRLAQWNTVEVHQTSTLEEALTRVQEMPMVY
Ga0170820_1730449713300031446Forest SoilLTATYVPMNNHMVFAAVEADDMATVREFAFQSRLGQWNTIDIYQVATLEEALTKVNELPTIYA
Ga0318554_1063974923300031765SoilLATYVPMTNHHVYAAVEADDADAVREFAWQGRLAQWNTVEIMQVSTLEEALVRVQEMPAI
Ga0318526_1038059623300031769SoilFAAVEADDANAVREFAFQARLGQWNTIEIYQVSTLEEALVRVHELPTIYS
Ga0318497_1045835113300031805SoilDAVREFAWQGRLAQWNTVEIMQVSTLEEALVRVQEMPAIY
Ga0318568_1040577813300031819SoilADDANSVREFSFQGRLGQWNTIEIYQVSTLEEALTKVNELPTIY
Ga0318536_1027988923300031893SoilMQYLMVFAAVEADDMSTVREFAFQSRLGQWNTIEIYQVSTLEEALTKVNELPTIY
Ga0307479_1153804413300031962Hardwood Forest SoilEAPDANAVREFAFQGRLGQWNTIDILQTSTLEEALTRVQELPTIY
Ga0318562_1042415523300032008SoilVREFSFQGRLGQWNTIEIYQVSTLEEALTKVQELPTEY
Ga0318525_1059945023300032089SoilNHHVYAAVEADDADAVREFAWQGRLAQWNTVEIMQVSTLEEALTRVQEIPAIY
Ga0307472_10073670613300032205Hardwood Forest SoilLATYVPMTNHMVVAAVEADDMDKVREFAFQGRLSQWNTVEIYQTSTLEEALGRVQELPTI
Ga0335082_1039380013300032782SoilMVFAAVEANDMDAVREFAFQSRLGQWNTLELYQVSTLEESMAKVEELPTIYG
Ga0335078_1039833413300032805SoilADDMDTVREFAFQSRLGQWNTIELYQVSTLEEALTKVTELPTIYG
Ga0373948_0093729_2_1243300034817Rhizosphere SoilDKVREFAFQGRLSQWNTVEIYQTSTLEEALGRVQELPTIY

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Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
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