Metagenome Family F078268

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F078268
Family Type	Metagenome
Number of Sequences	116
Average Sequence Length	68 residues
Representative Sequence	MDETSGVALALRTGVPSYQVEDEEGRTHLLIHLPIEEEDEDRWCLWRPDHAGFDSRSIFEGALVEG
Number of Associated Samples	66
Number of Associated Scaffolds	116

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	7.27 %
% of genes near scaffold ends (potentially truncated)	49.14 %
% of genes from short scaffolds (< 2000 bps)	73.28 %
Associated GOLD sequencing projects	57
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.40

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Unclassified (50.000 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil (17.241 % of family members)
Environment Ontology (ENVO)	Unclassified (38.793 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (58.621 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 5.32% β-sheet: 31.91% Coil/Unstructured: 62.77%
Feature Viewer

Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.40
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.40
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 116 Family Scaffolds
PF00196	GerE	1.72
PF04389	Peptidase_M28	1.72
PF01526	DDE_Tnp_Tn3	1.72
PF04519	Bactofilin	1.72
PF12833	HTH_18	1.72
PF05368	NmrA	0.86
PF13561	adh_short_C2	0.86
PF13847	Methyltransf_31	0.86
PF13489	Methyltransf_23	0.86
PF00583	Acetyltransf_1	0.86
PF14566	PTPlike_phytase	0.86
PF14066	DUF4256	0.86
PF02705	K_trans	0.86
PF03601	Cons_hypoth698	0.86
PF03729	DUF308	0.86
PF00561	Abhydrolase_1	0.86
PF07978	NIPSNAP	0.86
PF11154	DUF2934	0.86
PF01419	Jacalin	0.86
PF03022	MRJP	0.86
PF00589	Phage_integrase	0.86
PF00144	Beta-lactamase	0.86
PF01408	GFO_IDH_MocA	0.86
PF00248	Aldo_ket_red	0.86
PF13416	SBP_bac_8	0.86
PF13673	Acetyltransf_10	0.86
PF01261	AP_endonuc_2	0.86
PF02452	PemK_toxin	0.86
PF03575	Peptidase_S51	0.86
PF08241	Methyltransf_11	0.86
PF00218	IGPS	0.86
PF02353	CMAS	0.86
PF01266	DAO	0.86
PF01068	DNA_ligase_A_M	0.86
PF02577	BFN_dom	0.86
PF07040	DUF1326	0.86
PF01425	Amidase	0.86
PF03466	LysR_substrate	0.86
PF02322	Cyt_bd_oxida_II	0.86

COG ID	Name	Functional Category	% Frequency in 116 Family Scaffolds
COG1664	Cytoskeletal protein CcmA, bactofilin family	Cytoskeleton [Z]	1.72
COG4644	Transposase and inactivated derivatives, TnpA family	Mobilome: prophages, transposons [X]	1.72
COG0134	Indole-3-glycerol phosphate synthase	Amino acid transport and metabolism [E]	0.86
COG0154	Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit or related amidase	Translation, ribosomal structure and biogenesis [J]	0.86
COG1259	Bifunctional DNase/RNase	General function prediction only [R]	0.86
COG1294	Cytochrome bd-type quinol oxidase, subunit 2	Energy production and conversion [C]	0.86
COG1423	ATP-dependent RNA circularization protein, DNA/RNA ligase (PAB1020) family	Replication, recombination and repair [L]	0.86
COG1680	CubicO group peptidase, beta-lactamase class C family	Defense mechanisms [V]	0.86
COG1686	D-alanyl-D-alanine carboxypeptidase	Cell wall/membrane/envelope biogenesis [M]	0.86
COG1793	ATP-dependent DNA ligase	Replication, recombination and repair [L]	0.86
COG2226	Ubiquinone/menaquinone biosynthesis C-methylase UbiE/MenG	Coenzyme transport and metabolism [H]	0.86
COG2227	2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase	Coenzyme transport and metabolism [H]	0.86
COG2230	Cyclopropane fatty-acyl-phospholipid synthase and related methyltransferases	Lipid transport and metabolism [I]	0.86
COG2337	mRNA-degrading endonuclease MazF, toxin component of the MazEF toxin-antitoxin module	Defense mechanisms [V]	0.86
COG2367	Beta-lactamase class A	Defense mechanisms [V]	0.86
COG2855	Uncharacterized membrane protein YadS, UPF0324 family	Function unknown [S]	0.86
COG3158	K+ uptake protein Kup	Inorganic ion transport and metabolism [P]	0.86
COG3247	Acid resistance membrane protein HdeD, DUF308 family	General function prediction only [R]	0.86
COG5588	Uncharacterized conserved protein, DUF1326 domain	Function unknown [S]	0.86

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	50.00 %
Unclassified	root	N/A	50.00 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	50.00 %
Unclassified	root	N/A	50.00 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.00 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	49.14 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	0.86 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.00 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	8.62 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	6.90 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	5.17 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1.72 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	0.86 %
Euryarchaeota	phylum	All Organisms → cellular organisms → Archaea → Euryarchaeota	0.86 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.00 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	8.62 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3.45 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	2.59 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	2.59 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1.72 %
Stenosarchaea group	clade	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group	0.86 %
Gemmatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	0.86 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.00 %
Spartobacteria	class	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria	2.59 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	2.59 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2.59 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2.59 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1.72 %
unclassified Verrucomicrobia	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia	0.86 %
Opitutae	class	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae	0.86 %
Methanomicrobia	class	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia	0.86 %
Verrucomicrobiae	class	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae	0.86 %
Gemmatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	0.86 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.00 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2.59 %
Chthoniobacterales	order	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales	2.59 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2.59 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.86 %
Opitutales	order	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae → Opitutales	0.86 %
Verrucomicrobiales	order	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales	0.86 %
Rhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae	0.86 %
Streptomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales	0.86 %
Methanosarcinales	order	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanosarcinales	0.86 %
Gemmatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	0.86 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.00 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2.59 %
unclassified Chthoniobacterales	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → unclassified Chthoniobacterales	1.72 %
Granulicella	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella	0.86 %
Chthoniobacteraceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae	0.86 %
Methanosarcinaceae	family	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanosarcinales → Methanosarcinaceae	0.86 %
Streptomycetaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	0.86 %
Rhizobium/Agrobacterium group	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group	0.86 %
Verrucomicrobiaceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobiaceae	0.86 %
Opitutaceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae → Opitutales → Opitutaceae	0.86 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.86 %
Gemmatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	0.86 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.00 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2.59 %
Chthoniobacterales bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → unclassified Chthoniobacterales → Chthoniobacterales bacterium	1.72 %
unclassified Verrucomicrobiaceae	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobiaceae → unclassified Verrucomicrobiaceae	0.86 %
unclassified Granulicella	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella → unclassified Granulicella	0.86 %
Methanosarcina	genus	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanosarcinales → Methanosarcinaceae → Methanosarcina	0.86 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	0.86 %
Opitutus	genus	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae → Opitutales → Opitutaceae → Opitutus	0.86 %
Rhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Rhizobium	0.86 %
Chthoniobacteraceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae	0.86 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.86 %
Gemmatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	0.86 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.00 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2.59 %
Chthoniobacterales bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → unclassified Chthoniobacterales → Chthoniobacterales bacterium	1.72 %
Granulicella sp. dw_53	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella → unclassified Granulicella → Granulicella sp. dw_53	0.86 %
unclassified Methanosarcina	no rank	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanosarcinales → Methanosarcinaceae → Methanosarcina → unclassified Methanosarcina	0.86 %
unclassified Rhizobium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Rhizobium → unclassified Rhizobium	0.86 %
Verrucomicrobiaceae bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobiaceae → unclassified Verrucomicrobiaceae → Verrucomicrobiaceae bacterium	0.86 %
Opitutus terrae	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae → Opitutales → Opitutaceae → Opitutus → Opitutus terrae	0.86 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	0.86 %
Chthoniobacteraceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae	0.86 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.86 %
Gemmatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	0.86 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.00 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2.59 %
Chthoniobacterales bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → unclassified Chthoniobacterales → Chthoniobacterales bacterium	1.72 %
Rhizobium sp. AB2/73	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Rhizobium → unclassified Rhizobium → Rhizobium sp. AB2/73	0.86 %
Methanosarcina sp.	species	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanosarcinales → Methanosarcinaceae → Methanosarcina → unclassified Methanosarcina → Methanosarcina sp.	0.86 %
Granulicella sp. dw_53	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella → unclassified Granulicella → Granulicella sp. dw_53	0.86 %
Verrucomicrobiaceae bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobiaceae → unclassified Verrucomicrobiaceae → Verrucomicrobiaceae bacterium	0.86 %
Opitutus terrae	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae → Opitutales → Opitutaceae → Opitutus → Opitutus terrae	0.86 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	0.86 %
Chthoniobacteraceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae	0.86 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.86 %
Gemmatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	0.86 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001170\|JGI12704J13340_1020482	Not Available	523	Open in IMG/M
3300001593\|JGI12635J15846_10042225	All Organisms → cellular organisms → Bacteria	3543	Open in IMG/M
3300001593\|JGI12635J15846_10052124	All Organisms → cellular organisms → Bacteria	3113	Open in IMG/M
3300001593\|JGI12635J15846_10063714	All Organisms → cellular organisms → Bacteria	2752	Open in IMG/M
3300002906\|JGI25614J43888_10001736	All Organisms → cellular organisms → Bacteria	6606	Open in IMG/M
3300002906\|JGI25614J43888_10004131	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	4589	Open in IMG/M
3300002906\|JGI25614J43888_10007795	All Organisms → cellular organisms → Bacteria	3466	Open in IMG/M
3300002906\|JGI25614J43888_10095811	All Organisms → cellular organisms → Bacteria	792	Open in IMG/M
3300002906\|JGI25614J43888_10199984	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → unclassified Chthoniobacterales → Chthoniobacterales bacterium	541	Open in IMG/M
3300002906\|JGI25614J43888_10212331	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	524	Open in IMG/M
3300002910\|JGI25615J43890_1025942	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	968	Open in IMG/M
3300002914\|JGI25617J43924_10174126	Not Available	721	Open in IMG/M
3300002917\|JGI25616J43925_10008540	All Organisms → cellular organisms → Bacteria	4464	Open in IMG/M
3300005332\|Ga0066388_106251974	Not Available	601	Open in IMG/M
3300005332\|Ga0066388_106401133	Not Available	594	Open in IMG/M
3300005434\|Ga0070709_10087664	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	2045	Open in IMG/M
3300005436\|Ga0070713_100045747	All Organisms → cellular organisms → Bacteria	3588	Open in IMG/M
3300005436\|Ga0070713_100161318	Not Available	2002	Open in IMG/M
3300005437\|Ga0070710_11111362	Not Available	581	Open in IMG/M
3300005445\|Ga0070708_100345166	Not Available	1403	Open in IMG/M
3300005445\|Ga0070708_101300965	Not Available	679	Open in IMG/M
3300005518\|Ga0070699_100266144	Not Available	1533	Open in IMG/M
3300005602\|Ga0070762_10171990	Not Available	1310	Open in IMG/M
3300005712\|Ga0070764_10637169	Not Available	652	Open in IMG/M
3300005921\|Ga0070766_11206744	Not Available	523	Open in IMG/M
3300007258\|Ga0099793_10537937	Not Available	582	Open in IMG/M
3300010043\|Ga0126380_10448419	Not Available	974	Open in IMG/M
3300010048\|Ga0126373_10510974	All Organisms → cellular organisms → Bacteria → Proteobacteria	1245	Open in IMG/M
3300010048\|Ga0126373_11374056	Not Available	772	Open in IMG/M
3300010361\|Ga0126378_10956333	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	961	Open in IMG/M
3300010361\|Ga0126378_11792542	All Organisms → cellular organisms → Bacteria → Proteobacteria	698	Open in IMG/M
3300010376\|Ga0126381_100249872	All Organisms → cellular organisms → Bacteria	2402	Open in IMG/M
3300010376\|Ga0126381_101156306	Not Available	1118	Open in IMG/M
3300012202\|Ga0137363_11829991	Not Available	500	Open in IMG/M
3300012582\|Ga0137358_10486142	Not Available	832	Open in IMG/M
3300012582\|Ga0137358_10873784	Not Available	591	Open in IMG/M
3300012918\|Ga0137396_10888255	Not Available	654	Open in IMG/M
3300020140\|Ga0179590_1007870	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae	2192	Open in IMG/M
3300020140\|Ga0179590_1023182	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella → unclassified Granulicella → Granulicella sp. dw_53	1478	Open in IMG/M
3300020199\|Ga0179592_10502984	All Organisms → cellular organisms → Bacteria	519	Open in IMG/M
3300020581\|Ga0210399_10430890	All Organisms → cellular organisms → Bacteria	1099	Open in IMG/M
3300020582\|Ga0210395_10221139	Not Available	1421	Open in IMG/M
3300020582\|Ga0210395_10493331	Not Available	921	Open in IMG/M
3300021046\|Ga0215015_10393741	Not Available	841	Open in IMG/M
3300021168\|Ga0210406_10851082	Not Available	690	Open in IMG/M
3300021168\|Ga0210406_11026631	Not Available	612	Open in IMG/M
3300021170\|Ga0210400_10544891	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	957	Open in IMG/M
3300021180\|Ga0210396_10001192	All Organisms → cellular organisms → Bacteria	29153	Open in IMG/M
3300021372\|Ga0213877_10022248	Not Available	1714	Open in IMG/M
3300021372\|Ga0213877_10190121	Not Available	663	Open in IMG/M
3300021403\|Ga0210397_10122160	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1787	Open in IMG/M
3300021439\|Ga0213879_10123930	Not Available	737	Open in IMG/M
3300021444\|Ga0213878_10003688	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	5379	Open in IMG/M
3300021474\|Ga0210390_10180324	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1784	Open in IMG/M
3300021474\|Ga0210390_10855552	Not Available	750	Open in IMG/M
3300021474\|Ga0210390_10900542	Not Available	728	Open in IMG/M
3300021474\|Ga0210390_10985489	Not Available	689	Open in IMG/M
3300021560\|Ga0126371_10623673	All Organisms → cellular organisms → Bacteria → Proteobacteria	1227	Open in IMG/M
3300024288\|Ga0179589_10063344	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1429	Open in IMG/M
3300024288\|Ga0179589_10395638	Not Available	633	Open in IMG/M
3300024288\|Ga0179589_10486891	Not Available	571	Open in IMG/M
3300024347\|Ga0179591_1010830	All Organisms → cellular organisms → Bacteria	3390	Open in IMG/M
3300026285\|Ga0209438_1030157	All Organisms → cellular organisms → Bacteria	1801	Open in IMG/M
3300026304\|Ga0209240_1000319	All Organisms → cellular organisms → Bacteria	20149	Open in IMG/M
3300026304\|Ga0209240_1000798	All Organisms → cellular organisms → Bacteria	12837	Open in IMG/M
3300026304\|Ga0209240_1002397	All Organisms → cellular organisms → Bacteria	7113	Open in IMG/M
3300026304\|Ga0209240_1002510	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	6964	Open in IMG/M
3300026304\|Ga0209240_1082464	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae → Opitutales → Opitutaceae → Opitutus → Opitutus terrae	1182	Open in IMG/M
3300026319\|Ga0209647_1001537	All Organisms → cellular organisms → Bacteria	19399	Open in IMG/M
3300026319\|Ga0209647_1031891	All Organisms → cellular organisms → Bacteria	3075	Open in IMG/M
3300026319\|Ga0209647_1068067	All Organisms → cellular organisms → Bacteria	1816	Open in IMG/M
3300026319\|Ga0209647_1249717	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → unclassified Chthoniobacterales → Chthoniobacterales bacterium	594	Open in IMG/M
3300026356\|Ga0257150_1039742	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanosarcinales → Methanosarcinaceae → Methanosarcina → unclassified Methanosarcina → Methanosarcina sp.	686	Open in IMG/M
3300026551\|Ga0209648_10312712	All Organisms → cellular organisms → Bacteria	1114	Open in IMG/M
3300026557\|Ga0179587_11083004	Not Available	527	Open in IMG/M
3300026674\|Ga0207924_100760	Not Available	577	Open in IMG/M
3300027109\|Ga0208603_1021815	All Organisms → cellular organisms → Bacteria	1024	Open in IMG/M
3300027548\|Ga0209523_1027965	All Organisms → cellular organisms → Bacteria	1122	Open in IMG/M
3300027567\|Ga0209115_1099985	Not Available	658	Open in IMG/M
3300027609\|Ga0209221_1023689	Not Available	1630	Open in IMG/M
3300027609\|Ga0209221_1137238	Not Available	614	Open in IMG/M
3300027648\|Ga0209420_1009394	Not Available	3575	Open in IMG/M
3300027648\|Ga0209420_1063357	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1088	Open in IMG/M
3300027648\|Ga0209420_1069582	All Organisms → cellular organisms → Bacteria	1028	Open in IMG/M
3300027648\|Ga0209420_1098870	Not Available	830	Open in IMG/M
3300027692\|Ga0209530_1178686	Not Available	590	Open in IMG/M
3300027884\|Ga0209275_10067201	All Organisms → cellular organisms → Bacteria	1767	Open in IMG/M
3300027889\|Ga0209380_10680275	Not Available	592	Open in IMG/M
3300027895\|Ga0209624_10406490	All Organisms → cellular organisms → Bacteria	907	Open in IMG/M
3300028906\|Ga0308309_10445890	Not Available	1114	Open in IMG/M
3300031231\|Ga0170824_102462289	Not Available	537	Open in IMG/M
3300031231\|Ga0170824_125263912	All Organisms → cellular organisms → Bacteria	1299	Open in IMG/M
3300031715\|Ga0307476_10177742	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobiaceae → unclassified Verrucomicrobiaceae → Verrucomicrobiaceae bacterium	1539	Open in IMG/M
3300031715\|Ga0307476_10625978	Not Available	798	Open in IMG/M
3300031715\|Ga0307476_10922684	Not Available	644	Open in IMG/M
3300031715\|Ga0307476_11286779	Not Available	534	Open in IMG/M
3300031718\|Ga0307474_10044563	All Organisms → cellular organisms → Bacteria	3273	Open in IMG/M
3300031718\|Ga0307474_10377809	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1100	Open in IMG/M
3300031753\|Ga0307477_10163237	All Organisms → cellular organisms → Bacteria	1553	Open in IMG/M
3300031753\|Ga0307477_10334323	Not Available	1043	Open in IMG/M
3300031753\|Ga0307477_11017942	Not Available	543	Open in IMG/M
3300031754\|Ga0307475_10121889	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Rhizobium → unclassified Rhizobium → Rhizobium sp. AB2/73	2054	Open in IMG/M
3300031754\|Ga0307475_10399108	Not Available	1105	Open in IMG/M
3300031823\|Ga0307478_10092073	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	2333	Open in IMG/M
3300031823\|Ga0307478_10242330	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	1463	Open in IMG/M
3300031823\|Ga0307478_10272382	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1380	Open in IMG/M
3300031823\|Ga0307478_11427210	Not Available	574	Open in IMG/M
3300031962\|Ga0307479_10207250	All Organisms → cellular organisms → Bacteria → Proteobacteria	1931	Open in IMG/M
3300031962\|Ga0307479_10782604	All Organisms → cellular organisms → Bacteria	930	Open in IMG/M
3300031962\|Ga0307479_11737173	Not Available	577	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	99.14%
Host-Associated	Host-Associated	0.86%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	99.14%
Fungi	Host-Associated → Fungi	0.86%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	99.14%
Mycelium	Host-Associated → Fungi → Mycelium	0.86%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	70.69%
Loam	Environmental → Terrestrial → Soil → Loam	28.45%
Unclassified	Host-Associated → Fungi → Mycelium → Unclassified	0.86%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	30.17%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	23.28%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	20.69%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	17.24%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	6.90%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.86%
Unclassified	Host-Associated → Fungi → Mycelium → Unclassified → Unclassified	0.86%

Habitat	Taxonomy	Distribution
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	17.24%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	16.38%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	13.79%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	12.07%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	11.21%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	6.90%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	6.90%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	5.17%
Bulk Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Bulk Soil	4.31%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	1.72%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	1.72%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.86%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.86%
Attine Ant Fungus Gardens	Host-Associated → Fungi → Mycelium → Unclassified → Unclassified → Attine Ant Fungus Gardens	0.86%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001170	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_O2	Environmental	Open in IMG/M
3300001593	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2	Environmental	Open in IMG/M
3300002906	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_60cm	Environmental	Open in IMG/M
3300002910	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_80cm	Environmental	Open in IMG/M
3300002914	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm	Environmental	Open in IMG/M
3300002917	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_100cm	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005437	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005602	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2	Environmental	Open in IMG/M
3300005712	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 4	Environmental	Open in IMG/M
3300005921	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6	Environmental	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300007258	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012582	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaG	Environmental	Open in IMG/M
3300012677	Attine ant fungus gardens microbial communities from New Jersey, USA - TSNJ012 MetaG	Host-Associated	Open in IMG/M
3300012918	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaG	Environmental	Open in IMG/M
3300020140	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300020199	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300020582	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-O	Environmental	Open in IMG/M
3300021046	Soil microbial communities from Shale Hills CZO, Pennsylvania, United States - 90cm depth	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300021170	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M	Environmental	Open in IMG/M
3300021180	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O	Environmental	Open in IMG/M
3300021372	Vellozia epidendroides bulk soil microbial communities from rupestrian grasslands, the National Park of Serra do Cipo, Brazil - BS_R01	Environmental	Open in IMG/M
3300021403	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-O	Environmental	Open in IMG/M
3300021439	Vellozia epidendroides bulk soil microbial communities from rupestrian grasslands, the National Park of Serra do Cipo, Brazil - BS_R03	Environmental	Open in IMG/M
3300021444	Vellozia epidendroides bulk soil microbial communities from rupestrian grasslands, the National Park of Serra do Cipo, Brazil - BS_R02	Environmental	Open in IMG/M
3300021474	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-O	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300024288	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_08_16fungal	Environmental	Open in IMG/M
3300024347	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_08_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300026285	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_20cm (SPAdes)	Environmental	Open in IMG/M
3300026304	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_80cm (SPAdes)	Environmental	Open in IMG/M
3300026319	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_60cm (SPAdes)	Environmental	Open in IMG/M
3300026356	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DL-13-A	Environmental	Open in IMG/M
3300026551	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm (SPAdes)	Environmental	Open in IMG/M
3300026557	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal	Environmental	Open in IMG/M
3300026674	Grasslands soil microbial communities from Chapel Hill, North Carolina, USA that are Nitrogen fertilized -NN356 (SPAdes)	Environmental	Open in IMG/M
3300027071	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM1H0_M2 (SPAdes)	Environmental	Open in IMG/M
3300027109	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF008 (SPAdes)	Environmental	Open in IMG/M
3300027548	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM3H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300027567	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O2 (SPAdes)	Environmental	Open in IMG/M
3300027609	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_O2 (SPAdes)	Environmental	Open in IMG/M
3300027648	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM1_O1 (SPAdes)	Environmental	Open in IMG/M
3300027692	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_O1 (SPAdes)	Environmental	Open in IMG/M
3300027884	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2 (SPAdes)	Environmental	Open in IMG/M
3300027889	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6 (SPAdes)	Environmental	Open in IMG/M
3300027895	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O1 (SPAdes)	Environmental	Open in IMG/M
3300028906	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031715	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_05	Environmental	Open in IMG/M
3300031718	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05	Environmental	Open in IMG/M
3300031753	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_515	Environmental	Open in IMG/M
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental	Open in IMG/M
3300031823	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12704J13340_10204822	3300001170	Forest Soil	LETGVPIYQVEDEEGRTHLLIYLAIEERHEHRWCLWRPDRAGFDSRSIFEGATVKE*
JGI12635J15846_100422257	3300001593	Forest Soil	ELKTGVPTYQVEDEEGRTHLLLHLTIEEKDANRWCLWRPDHAGFDSRSIFEGALVDE*
JGI12635J15846_100521244	3300001593	Forest Soil	MLGTRHKLVRFWMNKTSGVALGLKTGVPSYQVEDEEGRTHLLIHLAIQEQNEHRWCLWRTDHAGFDSRSTIFEGALVEE*
JGI12635J15846_100637141	3300001593	Forest Soil	FFAVIKFWMDATSGVALDLETGVPIYQVEDEEGRTHLLIYLAIEERHEHRWCLWRPDRAGFDSRSIFEGATVKE*
JGI25614J43888_100017363	3300002906	Grasslands Soil	MDETSGVTLALKTGIPSYQIEDEEGRTHLLIHLTIEEENENRWCLWRPDHAGFDSRRSLRVP*
JGI25614J43888_100041311	3300002906	Grasslands Soil	MDETSGVALALKTGVPTYQVEDEEGRTHLLIHLPIEEENEDRWCLWCPDQVGFDSRLIFEAALVEE*
JGI25614J43888_100077954	3300002906	Grasslands Soil	MDETSGVALALKSGIPSYQVEDEEGRIHLLLYLPIHQNEDRWCLWRPDHAGFDSRSIFEGALIQE*
JGI25614J43888_100958111	3300002906	Grasslands Soil	FWMDATSGVALELKTGVPAYQVEDEEGRTHLLIHLPIEEEDEDRWCLWRPDHAGFDSRSIFEGALVEE*
JGI25614J43888_101999841	3300002906	Grasslands Soil	FIKFWMDETSGVALALKTGVPSYQVEDEEGRTHLLIHLRIEEDGDNNRWCLWRPDQAGFDSRSIFEGALVARSG*
JGI25614J43888_102123312	3300002906	Grasslands Soil	MKPLALRLLSEASVPSYQVEDEEGRIHLLIHLAIEEENEHRWCLWRPDHAGFDSRS
JGI25615J43890_10259421	3300002910	Grasslands Soil	KFWMDETSGVALALKTGVPSYQVEDEEGRTHLLIHLPIEEDEDRWCLWRPDHAGFDSRSIFEAALVEE*
JGI25617J43924_101741261	3300002914	Grasslands Soil	MDKTSGVALPLESGVPTYQVQGEEGRTHLLIHLPIEEQNEHRWCLWRPDHAGFDSRSIFEGALVEE*
JGI25616J43925_100085404	3300002917	Grasslands Soil	VAFLPNQVEDEEGRAYLLIHLAIEEQNQHRRCLWRSDQAGFDSMSIFDGALIEK*
Ga0066388_1062519741	3300005332	Tropical Forest Soil	EDKPDRLFTVIKPWADEALSISLKLSSDVPCYQVEDEEGRTHLLIRLPIEEQNQHRWCLWRPDHAGFDSRSIFEGALVEE*
Ga0066388_1064011331	3300005332	Tropical Forest Soil	GVALELNTGVPSYHVDDEEGRTHLLIHLPIEADEHRWCLWRPDLAGFDSRSIFEGALVEG
Ga0070709_100876641	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	MDATSGVALELKTGVPTYQVEDEEGTIHLLLHLLIEEENEHRWCLWRPDHTASDSRSIFESPLIEE*
Ga0070713_1000457472	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	MDKTSGIALDLKTGVPTYQAEDEEGRPHLLIHLPIEEEGEHRWCLWRPDHTGFDSRSIFEGAPVEK*
Ga0070713_1001613183	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	VITFCIDKVSGVALDLETGVPCYQAEDEEGRIHLLIQLPIGEKNENRWCLWRPDQAEFDSKSIFDGALIEE*
Ga0070710_111113621	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	GSPKTTPATKCLAIVKFWMDKTSGIALDLKTGVPTYQAEDEEGRPHLLIHLPIEEEGEHRWCLWRPDHTGFDSRSIFEGAPVEK*
Ga0070708_1003451662	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MDETSGVALALRGSGPTYQVEDEEGRTHLLINFPIEEGHDDRWCLWRPDHAGFDSRSIFEAALVEE*
Ga0070708_1013009651	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	LDETSGVALALKTDVPTYQVEEEEGRTHLLIHLPIEEEDEDRWCLWRPDHAAFDSRSIFEGALVDQ*
Ga0070699_1002661444	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	LDETSGVALALKTDVPTYQVEEEEGRTHLLIHLPIEEEDEDRWCLWRPDHAAFDSRSIFEGALIEE*
Ga0070762_101719903	3300005602	Soil	LIRPAASAVNSDSGGQADRFFIVIKFWMAATSGAALALETGVRSYQVEDEEGRMHLLIHLAIEEDRWCLWWPDHEWFDSRSIFESALVEK*
Ga0070764_106371691	3300005712	Soil	MTLRVALALKGGVPTYQVEDQEGRTLLLIHLPIEEADENRWCLWRPDHAGVDSRSIFEGALTD*
Ga0070766_112067442	3300005921	Soil	IKFWMDATSGVALDLKTGVPIYQVEDEEGRTHLLIHLSIEEQNEHRWCLWRPDHAGFDSKSIFEGALIEE*
Ga0070717_100379271	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	DLEMGVPCYQVEDEEGRIHLLLQLPIGEENKNRWCLWRPDQVDFDFRSIFEGALIEE*
Ga0099793_105379371	3300007258	Vadose Zone Soil	MDETSGVALALRGGVPTYQVEGEKGRTHLRIHLTIEEQNEHRWCLWRPDHAGFDSRSIFDNALIEE*
Ga0126380_104484191	3300010043	Tropical Forest Soil	ERFFRVIKFWLDQTSGIAHALRTGVPSYQVEDVEGRIHLLLDLPIEEENEDGWHLRRPDQTGFNSRPIFEGALIEE*
Ga0126373_105109742	3300010048	Tropical Forest Soil	MDETSGIALALKTGVSSYQVEDEEGRIHLLLHFPIEDKNQDRWFLWRPDQDGFNSRSIFDGALVEE*
Ga0126373_113740562	3300010048	Tropical Forest Soil	LHDKPDRFFTVIKFRMDESSGVALELKTGVPTYQVEGEEGRIHLLIHLPIEEENEDRWCLWRPDQVSFDSRSIFDDALVEE*
Ga0126378_109563331	3300010361	Tropical Forest Soil	PDRFFTVIKFWIDKTSGMALELNTGVPSYHVDDEEGRTHLLIHLPIEANEHRWCLWRPDLAGFDSRSIFEGALVDE*
Ga0126378_117925421	3300010361	Tropical Forest Soil	ITFLIDAVSGVALDLKTGVPCYQVEDEEGRIHLLVHLPIEEKDEGRWCLWRPDQAAFDSRSIFYGALIED*
Ga0126381_1002498722	3300010376	Tropical Forest Soil	LELNTGVPSYHVNDEEGRTHLLIHLPIEADEHRWCLWRPDLAGFDSRSIFEGALVEG*
Ga0126381_1011563062	3300010376	Tropical Forest Soil	MKPRALALALKTGVPTYQVEDKEGRIHLLIHLPIEEAGDNNRWSLWRPDHAGFDSRSIFAGALVEE*
Ga0137363_118299911	3300012202	Vadose Zone Soil	SGLLGIGIGIPCYQVEDEEGRTHLLIHLPIEEEDEDRWCLWRPDHAGFDSKSIFEAALVEK*
Ga0137358_104861422	3300012582	Vadose Zone Soil	SDDRPDRFFTVIQFWMDETSGVALALRGGVPTYQVEGEKGRTHLRIHLTIEEQNEHRWCLWRPDHAGFDSRSIFDNALIEE*
Ga0137358_108737841	3300012582	Vadose Zone Soil	MDETSGMALALKTGVPSYQVEDEEGRTHLLTQLAIEGDVEHRWCLWRPDHAGFDSRSIFESALISE*
Ga0153928_10759852	3300012677	Attine Ant Fungus Gardens	LKTGVPCYQVEDEEGRIHLLLQLPIGEDNENRWVLWRPDQAGFDSRSIFHGALVEE*
Ga0137396_108882551	3300012918	Vadose Zone Soil	RFFTVIKFWMDETSGVALALRGGVPSYQVEDEEGRTHLLIHLPVEEEDEDRWCLWRPDHAGFDSRSIFEGALVED*
Ga0179590_10078706	3300020140	Vadose Zone Soil	AVIKFWMDETLGASLALGTGVPSYQGENEEGRTHLLIHLAIEEQNERRWYLWRPDHAGFDSRSIFKGALVEE
Ga0179590_10231821	3300020140	Vadose Zone Soil	MDEPSGVALALNAGVPTYQVEDEEGRTHLLIHLPIEEEHEHRWCLWRPDQAGFDSRSIFEGALVEE
Ga0179592_105029842	3300020199	Vadose Zone Soil	KFWMDETSGVALALKNGIPTYQVEDEEGRTHLVIHLPIEDDGDRWCLWRPDHAGFDSRSIFEGALVAE
Ga0210399_104308902	3300020581	Soil	MDKTSGIALDLKTGVPTYQAEDEEGRPHLLIHLPIEEEGEHRWCLWRPDHTGFDSRSIYEGAPVEK
Ga0210395_102211392	3300020582	Soil	MDKTSGIALDLKTGVPTYQAEDEEGRPHLLIHLPIEEEGEHRWCLWRPDHTGFDSRSIFEGAPVEK
Ga0210395_104933311	3300020582	Soil	VITFCIDKVSGVALDLETGVPCYQAEDEEGRIHLLIQLPIGEKNENRWCLWRPDQAELDSKSIFDGALIEE
Ga0215015_103937412	3300021046	Soil	IKFWMDATSGVALDLKTGVPAYHVEDEEGRTHLLIHLAIEEQIEHRWCLWRPDQAGFDSRSIFEGALVEE
Ga0210406_102731031	3300021168	Soil	LRDGVPTYQVEDEEGRIHLLIHLAIEEQIEHRWCLWRPDQAGFDSRSIFEGALIEE
Ga0210406_108510821	3300021168	Soil	TVIKFWMDETSGVALALTTGVPTYQVEDEEGRSHLLIHLTIEEQLGHRWCLWRPDHAGFDFRSIFESALIEE
Ga0210406_110266311	3300021168	Soil	SGVALALKTGVPTYQVEDEEGRSHLLIHLTIEEQLEHRWCLWQPDHAGFDSRSIFESALIEE
Ga0210400_105448912	3300021170	Soil	MDKTSGIALDLKTGVPTYQAEDEEGRPHLLIHLPIEEEGEHRWCLWRPDHTGFDSRSIYEGAPVE
Ga0210396_1000119216	3300021180	Soil	VITFCIDKVSGVALDLETGVPCYQAEDEEGRIHLLIQLPIGEKNENRWCLWRPDQAEFDSKSIFDGALIEE
Ga0213877_100222481	3300021372	Bulk Soil	MDETSGVALDLKTGVPSYQVEDEEGRVHLLIHLPIEEDGDDNRWCLWRPDHVGFDSRSIFEGTLIEE
Ga0213877_101901211	3300021372	Bulk Soil	FWIDKTSGVALDLKTGVPSYQVDDEEGRTHLLIHLPLEANDHRWCLWRPDLAGFDSRSIFEGALIEG
Ga0213877_102143882	3300021372	Bulk Soil	EGLSIPLESIGGVPSYQVEDEEGRTHLLLHLQIEEYDRRWCLWRPDQAGIDYRSLFNGALVED
Ga0210397_101221601	3300021403	Soil	RVSGVALDLEMGVPCYQVEDEEGRIHLLLQLPIGEENKNRWCLWRPDQVDFDFRSIFEGALIEE
Ga0213879_101239301	3300021439	Bulk Soil	DKTSGVALDLKTGVPTYQVEDEEGRTHLLIRLPIDENGDRWCLWRPDHAGFDSRSIFEGALVEE
Ga0213878_100036881	3300021444	Bulk Soil	FSLMIKPDRFFTIIKFWMDETSGVALALKGGVPTYQVEDEDGRIHLLIHLPIEENEHRWCLWRPDQAGFDSRSVFAGALVEE
Ga0210390_101803241	3300021474	Soil	DRVSGVALDLEMGVPCYQVEDEEGRIHLLLQLPIGEENKNRWCLWRPDQVDFDFRSIFEGALIEE
Ga0210390_108555521	3300021474	Soil	IDKVSGVALDLETGVPCYQAEDEEGRIHLLIQLPIGEKNENRWCLWRPDQAEFDSKSIFDGALIEE
Ga0210390_109005422	3300021474	Soil	MDATSGVALELKTGVPTYAPKACRRREEGRTHLLIHVPIEEEKEDRWCLWRPDHAGFDSRSIFEGALIENRPASRKNVL
Ga0210390_109854891	3300021474	Soil	LETGVRSYQVEDEEGRMHLLIHLAIEEDRWCLWWPDHEWFDSRSIFESALVEK
Ga0126371_106236732	3300021560	Tropical Forest Soil	MDETSGIALALKTGVSSYQVEDEEGRIHLLLHFPIEDKNQDRWFLWRPDQDGFNSRSIFDGALVEE
Ga0179589_100633442	3300024288	Vadose Zone Soil	MDETSGIALALRGGVPSSQVEDEEGRIHLLIHFPIEEENEHRWCVWRPDHAGFDSRSVFD
Ga0179589_103956382	3300024288	Vadose Zone Soil	LLYVIKFWMDETSGVALELKTGIPTYHVEDEEGRTHLLIHLPIEEEDADRWCLWRPDHAGFDSRSISEGALVEE
Ga0179589_104868912	3300024288	Vadose Zone Soil	MDETSGVALALKTGVPTYQIEDEEGRSHLLIHLTIEEQLEHRWCLWRPDHAGFDSRSIFESALIEE
Ga0179591_10108302	3300024347	Vadose Zone Soil	MDETSGIALALKTGVPSYQLEDEEGTTHLLIPLPIEEEHKHRRCLWRPDLAGFDSRAIFEGALVEKTSIQKNALKSD
Ga0209438_10301571	3300026285	Grasslands Soil	MDETSGASLALGTGVPSYQGENEEGRTHLLIHLAIEEQNERRWYLWRPDHAGFDSRSIFKGALVEE
Ga0209240_100031919	3300026304	Grasslands Soil	TVIKFWMDETSGVALALKTGVPSYQVEDEEGRTHLLIHLPIEEDEDRWCLWRPDHAGFDSRSIFEAALVEE
Ga0209240_100079810	3300026304	Grasslands Soil	MDETSGVALALKTGVPTYQVEDEEGRTHLLIHLPIEEENEDRWCLWCPDQVGFDSRLIFEAALVEE
Ga0209240_10023973	3300026304	Grasslands Soil	MDETSGVALALRTGVPSYQVEDEEGRTHLLIHLPIEEEDEDRWCLWRPDHAGFDSRSIFEGALVEG
Ga0209240_10025108	3300026304	Grasslands Soil	PDRFFTVIKFWMDATSGVALELKTGVPAYQVEDEEGRTHLLIHLPIEEEDEDRWCLWRPDHAGFDSRSIFEGALVEE
Ga0209240_10824642	3300026304	Grasslands Soil	MKPLALRLLSEASVPSYQVEDEEGRIHLLIHLAIEEENEHRWCLWRPDHAGFDSRSIFEAALIEK
Ga0209647_100153712	3300026319	Grasslands Soil	MDETSGVTLALKTGIPSYQIEDEEGRTHLLIHLTIEEENENRWCLWRPDHAGFDSRRSLRVP
Ga0209647_10318913	3300026319	Grasslands Soil	MDETSGVALELKTGVPTYQVEDEEGRTHLLIHVPIEEENEDRWCLWRPDHAGFDYRSIFEGALVEK
Ga0209647_10680671	3300026319	Grasslands Soil	LYSIPNAAWIFTIIKFWMDETSGVALALRGGVPTYQVEGEEGRTHLLINLPIEEADENRWCLWRPDQAGFDSRSIFEGALAGE
Ga0209647_12497171	3300026319	Grasslands Soil	ALKTGVPSYQVEDEEGRTHLLIHLRIEEDGDNNRWCLWRPDQAGFDSRSIFEGALVARSG
Ga0257150_10397422	3300026356	Soil	DETSGASLALGTGVPSYQGENEEGRTHLLIHLAIEEQNERRWYLWRPDHAGFDSRSIFKGALVEE
Ga0209648_103127122	3300026551	Grasslands Soil	MDETSGVALALKSGIPSYQVEDEEGRIHLLLYLPIHQNEDRWCLWRPDHAGFDSRSIFEGALIQE
Ga0179587_110830041	3300026557	Vadose Zone Soil	FWMDETLGASLALGTGVPSYQGENEEGRTHLLIHLAIEEQNERRWYLWRPDHAGFDSRSIFKGALVEE
Ga0207924_1007601	3300026674	Soil	RVSGVALDLEMGVPCYQVEDEEGRIHLLLQLPIGEKNENRWCLWRPHRVVFDSRSIFDVALIDG
Ga0209214_10008931	3300027071	Forest Soil	LKTGVPTYQVEDEEGRTHLLIHLPIEEEDENRWCLWRPDLVGVDSRSIFDGALVKG
Ga0208603_10218152	3300027109	Forest Soil	RSFTVIKFWMDATSGVALELTTGVPTYQVEDEEGRTHLLIHLPIEEDEDRWCLWRPDHAGFDSRSIFEGALIEE
Ga0209523_10279651	3300027548	Forest Soil	MDATSGVALELKTGVPTYQVEDEEGRIHLLIHLAIEEQNEHRWCLWRPDHAGFDSRSIFEGALIEE
Ga0209115_10999852	3300027567	Forest Soil	MAATSGAALALETGVRSYQVEDEEGRMHLLIHLPIEEEDENRCCLWRPDRAGFDSKSIFEGAL
Ga0209221_10236891	3300027609	Forest Soil	DRFFAVIKFWMDATSGVALDLETGVPIYQVEDEEGRTHLLIYLAIEERHEHRWCLWRPDRAGFDSRSIFEGATVKE
Ga0209221_11372382	3300027609	Forest Soil	MNKTSGVALGLKTGVPSYQVEDEEGRTHLLIHLAIQEQNEHRWCLWRTDHAGFDSRSTIFEGALVEE
Ga0209420_10093942	3300027648	Forest Soil	MLGTRHKLVRFWMNKTSGVALGLKTGVPSYQVEDEEGRTHLLIHLAIQEQNEHRWCLWRTDHAGFDSRSTIFEGALVEE
Ga0209420_10633572	3300027648	Forest Soil	MDATSGVALELKTGVPTYQVEDEEGRTHLLLHLTIEEKDANRWCLWRPDHAGFDSRSIFEGALVDE
Ga0209420_10695822	3300027648	Forest Soil	MDATSGVALDLETGVPIYQVEDEEGRTHLLIYLAIEERHEHRWCLWRPDRAGFDSRSIFEGATVKE
Ga0209420_10988701	3300027648	Forest Soil	DRFFTVIKFWMDAISGVALELKTGVPTYQVEDEEGRTHLLIHLATDEEHEHRWCLWRPDHAGFDSRSIFEGALVEEFSDR
Ga0209530_11786861	3300027692	Forest Soil	MDKTSGVALDLETGVHTYQAEHEEARTHLLIHLPIEEQGEDRWCLWRPDHAGFDSRSIFESALIEE
Ga0209275_100672014	3300027884	Soil	LIRPAASAVNSDSGGQADRFFIVIKFWMAATSGAALALETGVRSYQVEDEEGRMHLLIHLAIEEDRWCLWWPDHEWFDSRSIFESALVEK
Ga0209380_106802751	3300027889	Soil	MDKTSGVALELKTGVPTYQFEDEDGRTHLLIHVPIEEENEDRWCLWRPDHAGFDLSVRSH
Ga0209624_104064901	3300027895	Forest Soil	LLFSDDKPDRFFTDIKFWMDATSGIALALKSGVPSYQVEDEEGRTHLLIHVLIEEKDADRWCLWRPDRAGSDSRSIF
Ga0308309_104458902	3300028906	Soil	MDATSGVALELKTGVPTYQVEDEEGRTHLLIHLLIEEQHEHPWCLWRPDHARFDSRSIFEGALVEK
Ga0170824_1024622891	3300031231	Forest Soil	LALKTGVPTYQVEDEEGRSHLLIHLTIEEQLEHRWCLWRPDHAGFDSRSIFESALIEE
Ga0170824_1252639121	3300031231	Forest Soil	MHESSGVALKLKTGVPSYQVEDEEGRTHLLIHLAIEEEDEDRWCLWRPDHAGFDSRSIFEGAFVDFIKTNPG
Ga0307476_101777421	3300031715	Hardwood Forest Soil	TVIKFWMDATSGVALELKTGVPTYQVEDEEGRIHLLIHITIEEDEDRWCLWRPDHADFDSRSIFDGALVDG
Ga0307476_106259781	3300031715	Hardwood Forest Soil	MDETSGVALALKTSVPSYQVEDEEGRIHLLVRLPIEEDGDRWCLWRPDQAGFDSSSIFEGALIE
Ga0307476_109226841	3300031715	Hardwood Forest Soil	ADQPDRFFAVIKFWLDETSGVALAVKGGVPTYQVEDEEGRIHLLLHLAIEEENEHRWCLWRPNHAGFDSRSVFEVALIEE
Ga0307476_112867791	3300031715	Hardwood Forest Soil	LELNTGVPTYQVEDEEGRIHLLIHLAIEEQNEHRWCLWRPDHAEFDSRSIFEGALVEE
Ga0307474_100445632	3300031718	Hardwood Forest Soil	MDEISGVALALKVGVPTYQVEDEEGRIHLLLHLPIEEENEHRWCLWRPDHAGFDSRSIFEAALIEE
Ga0307474_103778092	3300031718	Hardwood Forest Soil	MDETSGASLGLGIGVPCYQIDDEEGRTHLLIQLTIKEEDADRWCFWRPDHAGFDSKSIFELLWLKNKAAFKKTL
Ga0307477_101632372	3300031753	Hardwood Forest Soil	MDEISGVALALKVGVPTYQVEDEEGRIHLLLHLPIEEENEHRWCLWRPDHAGFDSRSIFEAA
Ga0307477_103343232	3300031753	Hardwood Forest Soil	SDDKPDRFFTVIKFWMDETSGVALALKGGIPTYQVEDEEGRTHLLIHLPIEEEDENRWCLWRPDHAGFDSRSIFEGALVEQ
Ga0307477_110179421	3300031753	Hardwood Forest Soil	MDKTTGIALDLKTGVPTYQVEDEEGRTHLLIHPAIEEQNEDRWCLWRPDHAGFDSRSIFEGARVEK
Ga0307475_101218892	3300031754	Hardwood Forest Soil	MDETSGVALALKAGIPTYKVEDEEGRTHLLIHLTIEEPNEHRWCLWRPDHAGFDSRSIFEGALIEE
Ga0307475_103991081	3300031754	Hardwood Forest Soil	MDESLGASLGLKTSVPSYQVEDEEGRIHLLIHLAIEEQNECRWYLWRPDHAGFDSRSIFEGALIEE
Ga0307475_113659731	3300031754	Hardwood Forest Soil	LKTGVPTYQVEDEEGRTHLLIHLPIEEEDEERWCLWRPDHAGFDSRLIFEGALVEK
Ga0307478_100920733	3300031823	Hardwood Forest Soil	PDRFFKVLKFWMDETSGVALTLKAGVPTYQVEDEEGRTHLLIHLPVEEDGKKNRWCLWRPDHAGFDSRSIFEGALVEG
Ga0307478_102423301	3300031823	Hardwood Forest Soil	DDKPDRFFTVIKFWMDATSGVARELKTDVPTYQVEDEEGRTHLLIHLPIEEDGVNKRWCLWRPDHADL
Ga0307478_102723821	3300031823	Hardwood Forest Soil	ETSGVALDLKTGVPTYQVENEEGRTHLLIHLAIEEQNEHRWCLWRPDQAGFDSRSIFEGALVED
Ga0307478_114272102	3300031823	Hardwood Forest Soil	TGERIKPSPEIFEAKRGVPIRQVEDEEGRTHLLIHLTIDEQNEHRWCLWRPDHAGFDSRSIFESALIEE
Ga0307479_102072504	3300031962	Hardwood Forest Soil	MVIKFWMDATSGLALALKTGVPSYQVEDEEGRTHLLIHLPIEEEHEDRWCLWRPDHAGFDSRSIFDGALVEE
Ga0307479_107826042	3300031962	Hardwood Forest Soil	TGVPTYQVEDEEGRTHLLIHLAIEEQHEHRWCLWRPDHAGFDSRSIFEGALIEQ
Ga0307479_117371731	3300031962	Hardwood Forest Soil	DKTSGVALDLKTGVPTYQVEDEEGRTHLLIHLAIEEENEDRWCLWRPDHAGFDLSVRSHN

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F078268

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences