NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome Family F078166

Metagenome Family F078166

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F078166
Family Type Metagenome
Number of Sequences 116
Average Sequence Length 103 residues
Representative Sequence MPTNENILLPETNKGGYTLAIIAKFEDPFPVQYIIRVSTPEGTEVDYMSTLEGFKNIGELLTALHYFAQTKLYPKNTGRLREVLTAESIKNFAEVLKATKFSV
Number of Associated Samples 52
Number of Associated Scaffolds 116

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Archaea
% of genes with valid RBS motifs 83.62 %
% of genes near scaffold ends (potentially truncated) 12.07 %
% of genes from short scaffolds (< 2000 bps) 62.07 %
Associated GOLD sequencing projects 45
AlphaFold2 3D model prediction Yes
3D model pTM-score0.55

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Archaea (53.448 % of family members)
NCBI Taxonomy ID 2157
Taxonomy All Organisms → cellular organisms → Archaea

Most Common Ecosystem
GOLD Ecosystem Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment
(26.724 % of family members)
Environment Ontology (ENVO) Unclassified
(41.379 % of family members)
Earth Microbiome Project Ontology (EMPO) Unclassified
(31.034 % of family members)


 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      

 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 28.24%    β-sheet: 25.19%    Coil/Unstructured: 46.56%
Feature Viewer
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.55
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 116 Family Scaffolds
PF07690MFS_1 4.31
PF01996F420_ligase 1.72
PF09962DUF2196 1.72
PF16795Phage_integr_3 1.72
PF03372Exo_endo_phos 1.72
PF13175AAA_15 1.72
PF07510DUF1524 1.72
PF03358FMN_red 1.72
PF02552CO_dh 0.86
PF03551PadR 0.86
PF02579Nitro_FeMo-Co 0.86
PF07691PA14 0.86
PF00571CBS 0.86
PF01163RIO1 0.86
PF11611DUF4352 0.86
PF04060FeS 0.86
PF14196ATC_hydrolase 0.86
PF00459Inositol_P 0.86
PF13589HATPase_c_3 0.86
PF01949DUF99 0.86
PF01402RHH_1 0.86
PF14947HTH_45 0.86
PF13302Acetyltransf_3 0.86
PF02371Transposase_20 0.86
PF01791DeoC 0.86
PF02673BacA 0.86
PF10011DUF2254 0.86
PF00338Ribosomal_S10 0.86
PF02517Rce1-like 0.86
PF04104DNA_primase_lrg 0.86
PF02153PDH_N 0.86
PF13649Methyltransf_25 0.86
PF01613Flavin_Reduct 0.86
PF12172DUF35_N 0.86
PF13404HTH_AsnC-type 0.86
PF13240zinc_ribbon_2 0.86
PF04014MazE_antitoxin 0.86
PF01592NifU_N 0.86
PF03683UPF0175 0.86
PF001982-oxoacid_dh 0.86
PF13924Lipocalin_5 0.86
PF03599CdhD 0.86
PF00565SNase 0.86
PF08542Rep_fac_C 0.86
PF12690BsuPI 0.86
PF08378NERD 0.86

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 116 Family Scaffolds
COG1478F420-0:Gamma-glutamyl ligase (F420 biosynthesis)Coenzyme transport and metabolism [H] 1.72
COG0051Ribosomal protein S10Translation, ribosomal structure and biogenesis [J] 0.86
COG0287Prephenate dehydrogenaseAmino acid transport and metabolism [E] 0.86
COG0470DNA polymerase III, delta prime subunitReplication, recombination and repair [L] 0.86
COG0508Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) componentEnergy production and conversion [C] 0.86
COG0822Fe-S cluster assembly scaffold protein IscU, NifU familyPosttranslational modification, protein turnover, chaperones [O] 0.86
COG1266Membrane protease YdiL, CAAX protease familyPosttranslational modification, protein turnover, chaperones [O] 0.86
COG1456CO dehydrogenase/acetyl-CoA synthase gamma subunit (corrinoid Fe-S protein)Energy production and conversion [C] 0.86
COG1628Endonuclease V homolog, UPF0215 familyGeneral function prediction only [R] 0.86
COG1695DNA-binding transcriptional regulator, PadR familyTranscription [K] 0.86
COG1733DNA-binding transcriptional regulator, HxlR familyTranscription [K] 0.86
COG1846DNA-binding transcriptional regulator, MarR familyTranscription [K] 0.86
COG1853FMN reductase RutF, DIM6/NTAB familyEnergy production and conversion [C] 0.86
COG1880CO dehydrogenase/acetyl-CoA synthase epsilon subunitEnergy production and conversion [C] 0.86
COG1968Undecaprenyl pyrophosphate phosphataseLipid transport and metabolism [I] 0.86
COG2069CO dehydrogenase/acetyl-CoA synthase delta subunit (corrinoid Fe-S protein)Energy production and conversion [C] 0.86
COG2219Eukaryotic-type DNA primase, large subunitReplication, recombination and repair [L] 0.86
COG2812DNA polymerase III, gamma/tau subunitsReplication, recombination and repair [L] 0.86
COG2886Predicted antitoxin, contains HTH domainGeneral function prediction only [R] 0.86
COG3547TransposaseMobilome: prophages, transposons [X] 0.86
COG4449Predicted protease, Abi (CAAX) familyGeneral function prediction only [R] 0.86

 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms58.62 %
UnclassifiedrootN/A41.38 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300001751|JGI2172J19969_10005579All Organisms → cellular organisms → Bacteria5438Open in IMG/M
3300001751|JGI2172J19969_10087547All Organisms → cellular organisms → Archaea930Open in IMG/M
3300001782|WOR52_10010764All Organisms → cellular organisms → Archaea10472Open in IMG/M
3300001782|WOR52_10023081Not Available9192Open in IMG/M
3300001782|WOR52_10027175All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon5944Open in IMG/M
3300001854|JGI24422J19971_10200276All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota871Open in IMG/M
3300001854|JGI24422J19971_10249159All Organisms → cellular organisms → Bacteria736Open in IMG/M
3300001854|JGI24422J19971_10259150Not Available715Open in IMG/M
3300003852|Ga0031655_10000103Not Available50123Open in IMG/M
3300009034|Ga0115863_1043522Not Available5832Open in IMG/M
3300009034|Ga0115863_1070782All Organisms → cellular organisms → Archaea → TACK group4408Open in IMG/M
3300009034|Ga0115863_1087979All Organisms → cellular organisms → Archaea3896Open in IMG/M
3300009034|Ga0115863_1220840Not Available2270Open in IMG/M
3300009034|Ga0115863_1332714All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon1779Open in IMG/M
3300009034|Ga0115863_1361233All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon1693Open in IMG/M
3300009034|Ga0115863_1449380All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon1484Open in IMG/M
3300009034|Ga0115863_1486859All Organisms → cellular organisms → Archaea1414Open in IMG/M
3300009034|Ga0115863_1513547All Organisms → cellular organisms → Bacteria1369Open in IMG/M
3300009034|Ga0115863_1821678Not Available1032Open in IMG/M
3300009150|Ga0114921_10092204All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon1997Open in IMG/M
3300009150|Ga0114921_10352353Not Available1058Open in IMG/M
3300009150|Ga0114921_10355891All Organisms → Viruses → Predicted Viral1053Open in IMG/M
3300009150|Ga0114921_10598083Not Available811Open in IMG/M
3300009150|Ga0114921_10813502Not Available693Open in IMG/M
3300009150|Ga0114921_10950504All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota640Open in IMG/M
3300009150|Ga0114921_10980229Not Available630Open in IMG/M
3300009150|Ga0114921_11062580Not Available604Open in IMG/M
3300009150|Ga0114921_11393249Not Available526Open in IMG/M
3300009150|Ga0114921_11474070Not Available510Open in IMG/M
3300009528|Ga0114920_10054039Not Available2441Open in IMG/M
3300010319|Ga0136653_10427818Not Available582Open in IMG/M
3300010328|Ga0129298_10011353All Organisms → cellular organisms → Archaea → Euryarchaeota4099Open in IMG/M
3300010328|Ga0129298_10397695All Organisms → cellular organisms → Archaea633Open in IMG/M
3300012931|Ga0153915_11952348Not Available687Open in IMG/M
3300012931|Ga0153915_12126365All Organisms → cellular organisms → Archaea657Open in IMG/M
3300012964|Ga0153916_10585854All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon1191Open in IMG/M
3300012964|Ga0153916_11781005Not Available688Open in IMG/M
3300012964|Ga0153916_11783460Not Available688Open in IMG/M
(restricted) 3300013127|Ga0172365_10065174All Organisms → cellular organisms → Archaea2379Open in IMG/M
(restricted) 3300013130|Ga0172363_10034877All Organisms → cellular organisms → Archaea3757Open in IMG/M
3300018015|Ga0187866_1214130Not Available708Open in IMG/M
3300018055|Ga0184616_10026433All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota1819Open in IMG/M
3300022204|Ga0224496_10041423All Organisms → cellular organisms → Archaea → TACK group2131Open in IMG/M
3300022208|Ga0224495_10223187Not Available779Open in IMG/M
3300022221|Ga0224506_10013120All Organisms → Viruses → Predicted Viral4691Open in IMG/M
3300022221|Ga0224506_10242856Not Available821Open in IMG/M
3300022551|Ga0212089_10005819All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → Methanoregulaceae → Methanoregula8810Open in IMG/M
3300022551|Ga0212089_10446906All Organisms → cellular organisms → Archaea580Open in IMG/M
3300022556|Ga0212121_10421172Not Available871Open in IMG/M
3300024263|Ga0209978_10054510All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon2022Open in IMG/M
3300024263|Ga0209978_10068502All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon1804Open in IMG/M
3300024263|Ga0209978_10070222All Organisms → cellular organisms → Archaea1782Open in IMG/M
3300024263|Ga0209978_10374517Not Available698Open in IMG/M
3300024263|Ga0209978_10437855Not Available633Open in IMG/M
3300024429|Ga0209991_10001426All Organisms → cellular organisms → Archaea10850Open in IMG/M
3300025143|Ga0209314_10007727All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanomicrobiales → Methanoregulaceae → Methanoregula4384Open in IMG/M
3300025314|Ga0209323_10188108All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon1354Open in IMG/M
3300027811|Ga0256868_10328682Not Available627Open in IMG/M
3300027888|Ga0209635_10003118All Organisms → cellular organisms → Archaea12882Open in IMG/M
3300027888|Ga0209635_10044371All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon3621Open in IMG/M
3300027888|Ga0209635_10145406Not Available1942Open in IMG/M
3300027888|Ga0209635_10466325Not Available970Open in IMG/M
3300027888|Ga0209635_10793061Not Available680Open in IMG/M
3300027888|Ga0209635_11129422Not Available528Open in IMG/M
3300027893|Ga0209636_10006899All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon11604Open in IMG/M
3300027893|Ga0209636_10021156All Organisms → cellular organisms → Archaea6596Open in IMG/M
3300027893|Ga0209636_10021636All Organisms → cellular organisms → Archaea6517Open in IMG/M
3300027893|Ga0209636_10040667Not Available4635Open in IMG/M
3300027893|Ga0209636_10083647All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon3095Open in IMG/M
3300027893|Ga0209636_10259050All Organisms → cellular organisms → Archaea → Euryarchaeota1557Open in IMG/M
3300027893|Ga0209636_10625503Not Available860Open in IMG/M
3300027893|Ga0209636_10687025All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon805Open in IMG/M
3300027893|Ga0209636_10777556Not Available737Open in IMG/M
3300027893|Ga0209636_11094431Not Available574Open in IMG/M
3300027893|Ga0209636_11104899Not Available570Open in IMG/M
3300027896|Ga0209777_10000343Not Available77951Open in IMG/M
3300027901|Ga0209427_10619227All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon794Open in IMG/M
3300027901|Ga0209427_10827393Not Available652Open in IMG/M
3300027917|Ga0209536_100922380Not Available1078Open in IMG/M
3300030613|Ga0299915_10754953Not Available610Open in IMG/M
3300031255|Ga0315554_1081078All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota1233Open in IMG/M
3300031539|Ga0307380_10035851All Organisms → cellular organisms → Archaea5664Open in IMG/M
3300031551|Ga0315548_1035862Not Available2483Open in IMG/M
3300031551|Ga0315548_1218226Not Available596Open in IMG/M
3300031565|Ga0307379_10012463All Organisms → cellular organisms → Archaea11080Open in IMG/M
(restricted) 3300031587|Ga0315308_1002086All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon11357Open in IMG/M
(restricted) 3300031587|Ga0315308_1033273All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon2430Open in IMG/M
(restricted) 3300031587|Ga0315308_1070805All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon1497Open in IMG/M
(restricted) 3300031587|Ga0315308_1106980All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon1140Open in IMG/M
(restricted) 3300031604|Ga0315309_1054947All Organisms → cellular organisms → Archaea1832Open in IMG/M
(restricted) 3300031604|Ga0315309_1105275Not Available1198Open in IMG/M
(restricted) 3300031604|Ga0315309_1224205Not Available711Open in IMG/M
3300031620|Ga0315552_1230493Not Available538Open in IMG/M
3300031654|Ga0315549_1277751Not Available603Open in IMG/M
3300031707|Ga0315291_10544859All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon1065Open in IMG/M
3300031746|Ga0315293_10590186All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota843Open in IMG/M
3300031772|Ga0315288_10072778All Organisms → cellular organisms → Archaea4007Open in IMG/M
3300031862|Ga0315280_10022674All Organisms → cellular organisms → Archaea6607Open in IMG/M
3300031873|Ga0315297_10129987All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota2027Open in IMG/M
(restricted) 3300031876|Ga0315310_10030045All Organisms → cellular organisms → Archaea → Euryarchaeota3074Open in IMG/M
(restricted) 3300031876|Ga0315310_10045614All Organisms → cellular organisms → Bacteria2371Open in IMG/M
(restricted) 3300031876|Ga0315310_10059162All Organisms → cellular organisms → Archaea2012Open in IMG/M
(restricted) 3300031876|Ga0315310_10114088All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota1307Open in IMG/M
(restricted) 3300031876|Ga0315310_10213466Not Available858Open in IMG/M
(restricted) 3300031876|Ga0315310_10263861All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota741Open in IMG/M
(restricted) 3300031877|Ga0315314_1000319All Organisms → cellular organisms → Archaea59329Open in IMG/M
(restricted) 3300031877|Ga0315314_1000506All Organisms → cellular organisms → Archaea42513Open in IMG/M
(restricted) 3300031877|Ga0315314_1109429Not Available1138Open in IMG/M
(restricted) 3300031898|Ga0315312_1000001All Organisms → cellular organisms → Archaea2229620Open in IMG/M
(restricted) 3300031898|Ga0315312_1000114All Organisms → cellular organisms → Archaea134833Open in IMG/M
3300032046|Ga0315289_11537012All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon505Open in IMG/M
3300032069|Ga0315282_10547370All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon641Open in IMG/M
3300032070|Ga0315279_10049222All Organisms → cellular organisms → Archaea4015Open in IMG/M
3300032070|Ga0315279_10678665Not Available630Open in IMG/M
3300032173|Ga0315268_10003089All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon18462Open in IMG/M
3300033991|Ga0334965_0325282Not Available580Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).


 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SedimentEnvironmental → Aquatic → Freshwater → Lake → Sediment → Sediment26.72%
Marine SedimentEnvironmental → Aquatic → Marine → Oceanic → Sediment → Marine Sediment21.55%
Deep SubsurfaceEnvironmental → Aquatic → Marine → Oceanic → Sediment → Deep Subsurface14.66%
Sediment, IntertidalEnvironmental → Aquatic → Marine → Intertidal Zone → Sediment → Sediment, Intertidal8.62%
Lake SedimentEnvironmental → Aquatic → Freshwater → Lake → Sediment → Lake Sediment4.31%
Freshwater WetlandsEnvironmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands4.31%
Salt Marsh SedimentEnvironmental → Aquatic → Marine → Intertidal Zone → Salt Marsh → Salt Marsh Sediment4.31%
SedimentEnvironmental → Aquatic → Marine → Sediment → Unclassified → Sediment3.45%
Marine SedimentEnvironmental → Aquatic → Marine → Intertidal Zone → Sediment → Marine Sediment2.59%
Freshwater Lake SedimentEnvironmental → Aquatic → Freshwater → Lentic → Sediment → Freshwater Lake Sediment1.72%
Anoxic Lake WaterEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Anoxic Lake Water1.72%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil1.72%
SoilEnvironmental → Terrestrial → Soil → Clay → Unclassified → Soil1.72%
PeatlandEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Peatland0.86%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment0.86%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil0.86%

Visualization
Powered by ApexCharts



Associated Samples

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Taxon OIDSample NameHabitat TypeIMG/M Link
3300001751Marine sediment microbial communities from White Oak River estuary, North Carolina - WOR-2-30_32EnvironmentalOpen in IMG/M
3300001782Marine sediment microbial communities from White Oak River estuary, North Carolina - WOR_deep_samplesEnvironmentalOpen in IMG/M
3300001854Marine sediment microbial communities from White Oak River estuary, North Carolina - WOR-1-52-54EnvironmentalOpen in IMG/M
3300003852Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies -HBP12 HBEnvironmentalOpen in IMG/M
3300009034Intertidal mud flat sediment archaeal communities from Garolim Bay, Chungcheongnam-do, KoreaEnvironmentalOpen in IMG/M
3300009150Deep subsurface microbial communities from South Atlantic Ocean to uncover new lineages of life (NeLLi) - Benguela_00093 metaGEnvironmentalOpen in IMG/M
3300009528Deep subsurface microbial communities from South Pacific Ocean to uncover new lineages of life (NeLLi) - Chile_00310 metaGEnvironmentalOpen in IMG/M
3300010319Anoxic lake water microbial communities from Lake Kivu, Rwanda to study Microbial Dark Matter (Phase II) - Lake Kivu water 275m metaGEnvironmentalOpen in IMG/M
3300010328Lake sediment bacterial and archeal communities from Gulf of Boni, Indonesia to study Microbial Dark Matter (Phase II) - ?I19B2 metaGEnvironmentalOpen in IMG/M
3300012931Freshwater wetland microbial communities from Ohio, USA - Open water 3 Core 3 Depth 3 metaGEnvironmentalOpen in IMG/M
3300012964Freshwater wetland microbial communities from Ohio, USA - Open water 3 Core 3 Depth 4 metaGEnvironmentalOpen in IMG/M
3300013127 (restricted)Sediment microbial communities from Lake Kivu, Rwanda - Sediment site 48cmEnvironmentalOpen in IMG/M
3300013130 (restricted)Sediment microbial communities from Lake Kivu, Rwanda - Sediment s2_kivu2a2EnvironmentalOpen in IMG/M
3300018015Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_11_150EnvironmentalOpen in IMG/M
3300018055Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_90_coexEnvironmentalOpen in IMG/M
3300022204Sediment microbial communities from San Francisco Bay, California, United States - SF_Jul11_sed_USGS_8_1EnvironmentalOpen in IMG/M
3300022208Sediment microbial communities from San Francisco Bay, California, United States - SF_Jul11_sed_USGS_4_1EnvironmentalOpen in IMG/M
3300022221Sediment microbial communities from San Francisco Bay, California, United States - SF_Jan12_sed_USGS_8_1EnvironmentalOpen in IMG/M
3300022551Boni_combined assemblyEnvironmentalOpen in IMG/M
3300022556Kivu_combined assemblyEnvironmentalOpen in IMG/M
3300024263Deep subsurface microbial communities from South Atlantic Ocean to uncover new lineages of life (NeLLi) - Benguela_00093 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300024429Deep subsurface microbial communities from South Pacific Ocean to uncover new lineages of life (NeLLi) - Chile_00310 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025143Lake sediment bacterial and archeal communities from Gulf of Boni, Indonesia to study Microbial Dark Matter (Phase II) - ?I19B2 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025314Soil microbial communities from Rifle, Colorado, USA - sediment 19ft 2EnvironmentalOpen in IMG/M
3300027811Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT92D227 HiSeqEnvironmentalOpen in IMG/M
3300027888Marine sediment microbial communities from White Oak River estuary, North Carolina - WOR-2-30_32 (SPAdes)EnvironmentalOpen in IMG/M
3300027893Marine sediment microbial communities from White Oak River estuary, North Carolina - WOR-1-52-54 (SPAdes)EnvironmentalOpen in IMG/M
3300027896Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies -HBP12 HB (SPAdes)EnvironmentalOpen in IMG/M
3300027901Marine sediment microbial communities from White Oak River estuary, North Carolina - WOR-1-36_30 (SPAdes)EnvironmentalOpen in IMG/M
3300027917Marine sediment microbial communities from White Oak River estuary, North Carolina - WOR-2-8_12 (SPAdes)EnvironmentalOpen in IMG/M
3300030613Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT92D227EnvironmentalOpen in IMG/M
3300031255Salt marsh sediment microbial communities from the Plum Island Ecosystem LTER, Massachusetts, United States - Salt Marsh Sediment SW1603-70EnvironmentalOpen in IMG/M
3300031539Soil microbial communities from Risofladan, Vaasa, Finland - UN-3EnvironmentalOpen in IMG/M
3300031551Salt marsh sediment microbial communities from the Plum Island Ecosystem LTER, Massachusetts, United States - Salt Marsh Sediment SW1601-110EnvironmentalOpen in IMG/M
3300031565Soil microbial communities from Risofladan, Vaasa, Finland - UN-2EnvironmentalOpen in IMG/M
3300031587 (restricted)Freshwater sediment microbial communities from Lake Towuti, South Sulawesi, Indonesia - TDP3EnvironmentalOpen in IMG/M
3300031604 (restricted)Freshwater sediment microbial communities from Lake Towuti, South Sulawesi, Indonesia - TDP4EnvironmentalOpen in IMG/M
3300031620Salt marsh sediment microbial communities from the Plum Island Ecosystem LTER, Massachusetts, United States - Salt Marsh Sediment SW1601-70EnvironmentalOpen in IMG/M
3300031654Salt marsh sediment microbial communities from the Plum Island Ecosystem LTER, Massachusetts, United States - Salt Marsh Sediment SW1601-200EnvironmentalOpen in IMG/M
3300031707Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G12_20EnvironmentalOpen in IMG/M
3300031746Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G13_20EnvironmentalOpen in IMG/M
3300031772Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G11_20EnvironmentalOpen in IMG/M
3300031862Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G06_40EnvironmentalOpen in IMG/M
3300031873Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G15_0EnvironmentalOpen in IMG/M
3300031876 (restricted)Freshwater sediment microbial communities from Lake Towuti, South Sulawesi, Indonesia - TDP5EnvironmentalOpen in IMG/M
3300031877 (restricted)Freshwater sediment microbial communities from Lake Towuti, South Sulawesi, Indonesia - TDP9EnvironmentalOpen in IMG/M
3300031898 (restricted)Freshwater sediment microbial communities from Lake Towuti, South Sulawesi, Indonesia - TDP7EnvironmentalOpen in IMG/M
3300032046Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G11_40EnvironmentalOpen in IMG/M
3300032069Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G07_20EnvironmentalOpen in IMG/M
3300032070Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G06_20EnvironmentalOpen in IMG/M
3300032173Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - C1_topEnvironmentalOpen in IMG/M
3300033991Sediment microbial communities from Lake Vrana, Zadar, Croatia - 4 bactEnvironmentalOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap


 ⦗Top⦘

Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID Sample Taxon ID Habitat Sequence
JGI2172J19969_1000557953300001751Marine SedimentLSVYENVLLEDTNKGGYRLAIIARFEEPYPVQYVIRVSTPDDVEVDYMSTLEGFKNIGELLTALSYFAKTKLYPEDPQKLREVLTAESIKSFAEVLKSARFGT*
JGI2172J19969_1008754713300001751Marine SedimentVGKQVDENILLKQANKGGYTLAIVARFEDPFPVQYRIRVSKPDGTEVDFVSTIEVFKSIGELLTALHYFAKTKLYPKDTSKLRGVLTAEKIKSFAEVLKAAKFSM*
WOR52_1001076473300001782Marine SedimentVIGMSVSENVFLEDTNKGGYKLAIVARFAEPFPVQYVIRLSTPKGANVEYMSTLEGFKNFGELLTALHYFAQTKLYPQDLQKLREVLTAENIKNFAEVLKAAKFSV*
WOR52_1002308193300001782Marine SedimentMKASENVLLEEVNDGGFRLAIVARFEDPYPVQYRIRVSKPEGVTVDYMSTLEGFRKFGELLTALHYFAQTKLYPKDTQKLREVLTAENIKNFAEVLKSAKFSV*
WOR52_1002717543300001782Marine SedimentMSCENVLLHEENKGGFSLGIIAKFEESYPVTYIIRITTPQGVQADFMSTLEGFKNIGELLVALRYFAETKLYPKDTEKLREVLTAETIKNFAEVLKSAKLSV*
JGI24422J19971_1020027613300001854Marine SedimentMSVCENTLLEDTNKGGYRLAIIARFEEPYPVQYIIRVSTPEGVEVDYMSTLEGFKNIGELLTALHYFAQTKLYPQDPYKLREVLTAEKIKNFAEVLKAAKFGV*
JGI24422J19971_1024915923300001854Marine SedimentMSDSENVLLEDSNKGGYRLAIIAKFEEPFPVQYIIRVSKPDGTGVDYMSTLEGFKNIGALLTALHYFAQTKLYPQDPNRLREVLTAENIKNFAEVLKAAKFSM*
JGI24422J19971_1025915023300001854Marine SedimentMGMSTNENILLQETNKGGYKLAIVARFEDPYPVQYIIRLAKPDGTEADYMSTLEGFKNIGELLTALHYFAKTKIYPKNADRLREVLTAETIKSFAEVLKSAKFSV*
Ga0031655_1000010383300003852Freshwater Lake SedimentMPTCENVLLHEKNNGGYGLAIIAKFEEPFPVSYIIRVTTPQGVQADFVSTLDGFKNIGELLIALHYFAGTKLYPKNTERLREVLTADQIKNFAELLKSGKFGAQRLR*
Ga0115863_104352253300009034Sediment, IntertidalMSVYENILLEDMNKGGFRLAIIARFEEPFPVQYRIRVSSPDGTEVDYVSTLEGLKNIGELLTAIHYFAQTKLYPQDPEKLREVLTAEKIKSFAEVLKSAKFSV*
Ga0115863_107078243300009034Sediment, IntertidalMAVSENVLLEDTNRGGYRLAIIARFEEPFPVQYIIRVSKPDGAEVDYMSTLEGFKNIGELLTALHYFAQTKLYPQDPDRLREVLTAENIKNFAEVLKAAKFSM*
Ga0115863_108797943300009034Sediment, IntertidalMSMSTNENILLQETNKGGYTLAILARFEDPYPVQYIIRLAKPDGTEADYMSTLEGFKNIGELLTALHYFAQTKLYPKDTAALREVLTAEKIKSFAEILKAAKLSV*
Ga0115863_122084013300009034Sediment, IntertidalMSSNENILLQETNKGGYKLAIVARFEDPYPVQYIIRLSKPDGTEIDYMSTLDGFKNIGELLSALHHFAKTKRYPKNIARLKEILTAETIKNFAELLKATKSKE*
Ga0115863_133271423300009034Sediment, IntertidalMSVYENTLLEDTNKGGYRLAIIARFEEPYPVQYIIRVSTPDGVEVDYMSTLEGFKNIGELLTALHYFAQTKLYPQDPYRLREVLTAENIKNFAEVLKAAKFSV*
Ga0115863_136123323300009034Sediment, IntertidalMSMSTNENILLQETNKGGYTLAILARFEDPYPVQYIIRLSEPDGTEVDYMSTLEGFKNIGELLIALHYFAKTKRYPKNIARLKEVLTAETIKNFAEVLKATKSSR*
Ga0115863_144938023300009034Sediment, IntertidalMSVYENILLEDTNKGGYRLAIMARFEEPFPVQYVIRVSTPDGVEVDYMSTLEGFKNIGELLTALHYFAQTKLYPEDPQRLREVLTAEKIKSFAEVLKAAKFSV*
Ga0115863_148685913300009034Sediment, IntertidalMSQENILLKETNNGGYKLEIISKFEKPFPVAYIIRVSTPYGEELDYISTLEGFKNIGELLIALHHFVQKKLYPKDPDKLREALTAENIKNFAKVLQSAEFSA*
Ga0115863_151354723300009034Sediment, IntertidalMSTNENILLQETNKGGFKLAIVARFVDPYPVQYIIRLSKPDGTEVEYMSTLEGFKNIGDLLIALHYFAKKKRYPKNIARLKKVLTAETIKNFAEVLKATKSSE*
Ga0115863_182167823300009034Sediment, IntertidalMSVYENVLLEDTNKGGYRLAIIARFEEPYPVQYVIRASTPDGVEVDYMSTLEGFKNIGELLTALSYFAKTKLYPQDPQKLREVLTAESIKSFAEVLKSARFGT*
Ga0114921_1009220423300009150Deep SubsurfaceMSKQANENILLQETNKGGYMLEVIAKFEDPYPVAYIIRVSTPKGKKVDYISTIEGFKNIGDLLTALHYFAKTKLYPKDITKLREVLTAENIKNFAEVLKAAKFSI*
Ga0114921_1035235323300009150Deep SubsurfaceMHAFLKLLKQPAVIRAIAEGISMSVSENILLEDTNKGGYRLAIVARFEEPFPVQYVIRLSTPKGTEVEYMSTLEGFKNFGELLTALHYFAKTKLYPQDLQKLREVLTAENIKNFAEVLKSARFSV*
Ga0114921_1035589123300009150Deep SubsurfaceMGVSSNENVLLHETNQGSFTLEVIARFSDRYPVQYLIRVSKPEGTHIDYVSTLEGFKNIGELLTALHYFAKKKLYPKNAVKLREVLTAENIKKFAEMLKAGEFRE*
Ga0114921_1059808323300009150Deep SubsurfaceVIYVGTPTSENILLHETNKGGYALEIIAKFEEPYPVAYIIRVSTPEGKKVDYISTIEGFKNIGDLLTALHYFAKTKLYPKDSLKLKEVLTAESIKSFAEVLKAAKFSI*
Ga0114921_1081350213300009150Deep SubsurfaceMSVAENVLMEDSNKGGYRLAIIARFEEPFPVQYKIRVSTPKGFEVDYVSTLEGFKNIGELLTALHYFAKTKLYPKDVHRLKEVLTAENIKNFAEVLKAAKSSM*
Ga0114921_1095050413300009150Deep SubsurfaceMPTNENILLPETNKGGYTLAIIAKFEDPFPVQYIIRVSTPEGTEVDYMSTLEGFKNIGELLTALHYFAQTKLYPKNTGRLREVLTAESIKNFAEVLKATKFSV
Ga0114921_1098022923300009150Deep SubsurfaceAIVARFEERFPVQYRIRVSKPDGTEVDYVSTIQGFKNIGELLMALHYFAKTKLYPKDTSKLREVLTAEKIKSFAEVLKAARFSV*
Ga0114921_1106258013300009150Deep SubsurfaceMEPSENVLLEEVNDGGFRLAIVARFGDPYPVQYRIRVSKPEGVSIDYMSTLEGFKKFGELLTALHYFAQTKLYPQDLQKLREVLTAENIKNFAEVLKSARFSV*
Ga0114921_1139324913300009150Deep SubsurfaceILLQETNKGGYKLEVIARFEDPFPVAYVIRVSTPEGTKVDYISTLDGFKNIGELLSALHHFAKTKRYPKNIARLKEVLTAETIKNFAEVLKATKSSR*
Ga0114921_1147407013300009150Deep SubsurfaceLEYTNESIRKEVIWMSSPNEDVLLKETNKGGYTLSIIARFEEPFPVQYIIRLSTPDGNEVDFMSTLEGFKNIGELLSALHYFAKAKIYPKDTARLKEVLTAENIKNFAEVLKAAKFSV*
Ga0114920_1005403933300009528Deep SubsurfaceMHAFLKLLKQPAVIRAIAEGISMSASENILLEDTNKGGYRLAIVARFEEPFPVQYVIRLSTPKGIEVEYMSTLEGFKNFGELLTALHYFAKTKLYPQDLQKLREVLTAENIKNFAEVLKSARFSV*
Ga0136653_1042781813300010319Anoxic Lake WaterMSTCENVLLHEKNQGGYGLSIIAKFQEPFPVNYIIRISTPKGVQADFISTLEGFKNIGELLTALHYFAKTKLYPKDTEKLKEVLTADTIKNFAEVLKSAKLSV*
Ga0129298_1001135343300010328Lake SedimentMVIWMSMKENILLQETNKGGYTLAIVAKFVEPYPVQYIIRVSPPEGAPVDYMSTLEGFKKIGELLTALHYFAKTKLYPKNTDRLREVLTADTIKSFAEVLKAAKFSV*
Ga0129298_1039769513300010328Lake SedimentMKWMNKHNKTENVLLKETNKGGYSLSIIAKFEDPFPVQYSIRISKPEGVEVDFVSTLDGFRNIGELLTALHYFAKTKLYPKDRNRLKEVLTAESIKSFAEVLKAAK*
Ga0153915_1195234813300012931Freshwater WetlandsMQDAAKMSRNENILLKETNKGGYSLAIIAAFENPYPVQYIIRVSKPEGEEVDFICTVDGFKNVGELLTALHYFAKTKLYPKDRNRLREVLTAENIKNFAEVLRSAKFSV*
Ga0153915_1212636523300012931Freshwater WetlandsMSTCENVLLHEENKGGYSLEIVAKFEEPFPVSYTIRVTTPQGVRVDYISTLEGFKNIGELLVALHYFAETKLYPKNAEKLREVLTADTIKNFAEVLKSA
Ga0153916_1058585413300012964Freshwater WetlandsMSTCENVLLHEENKGGYSLEIVAKFEEPFPVSYTIRVTTPQGVGVDYISTLAGFKNIGELLVALHYFAETKLYPKNAEKLREVLTADTIKNFAEVLKSAKFGV*
Ga0153916_1178100513300012964Freshwater WetlandsMSTCENVLLHETNKGGYSLEIIAKFEDPFPVSYIIRVATPQGVQADYISTIEGFKNIGGLLMALHYFAETKLYPKNTEKLKEVLTAETIKNFAEVLKSAKFSV*
Ga0153916_1178346023300012964Freshwater WetlandsMSRNENILLKETNKGGYSLAIIAAFEEPYPVQYIIRVSKPEGGKVDFLSTVDGFKNVGELLTALHYFAKTKLYPQDRNRLREVLTAENIKNFAEVLRSAKFSV*
(restricted) Ga0172365_1006517433300013127SedimentMSTSENVLLREKNDGGYSLSIIAKFQEPFPVSYIIRVTPPHGAQVDFISTLEGFKNIGELLMALYHFAGTKLYPTNAEKLKEVLTADFIKRFAELRKSGKFSV*
(restricted) Ga0172363_1003487753300013130SedimentMSNCENVLLHEKNQGGYNLAIIAKFQEPFPVSYIIRITTPQGAQADFMSTLEGFKNIGELLMALHYFAKTKLYPKDTEKLEEVLTADTIKNFAEVLKSAKFSV*
Ga0187866_121413013300018015PeatlandMPTCENVLLHEKNNGGYGLAIIAKFEEPFPVSYIIRVTTPQGVQADFVSTLDGFKNIGELLTALHYFAGTKLYPKNTERLREVLTADQIKNFAELLKSGKFGAQPLR
Ga0184616_1002643313300018055Groundwater SedimentMSACENVLLRETNDGGYSLSIIAKFQDPYPVTYIIRVTKPQGAPIDFISTLDGFKNIGELLVALHHFARTKLYPKNTEKLKEVLTADNIKNFAELLKSGKFGG
Ga0224496_1004142343300022204SedimentMNENILLQETNKGGYTLAIIARFEDPFPVQYVIRVSTPEGTEVDYMSTLEGFKNIGELLTALHYFAQTKLYPKNAVRLREVLTAENIKNFAEVLKAAKFSV
Ga0224495_1022318723300022208SedimentMHRKENILLEETNKGGFTLAIIARFEEPYPVQYIIRLSPRKGDPVEFMSTLEGFKSIGELLTALHYFAQTKLYPTDPNRLKEVLTAEKIKSFAEVLKSARLSM
Ga0224506_1001312073300022221SedimentMSMSSNENILLQETNKGGYKLAIVARFEDPYPVQYIIRLSKPDGTEVDYMSTLDGFKNIGELLSALHHFAKTKRYPKNIARLKEVLTAETIKNFAELLKATKSNE
Ga0224506_1024285623300022221SedimentMNRENVLLQETNKGGYTLLIVARFEDPIQYIIRVSTPQGERVDYMSTLEGFKNIGELLTALHYFAKAKIYPKDTAKLREVLTAENIKNFAEVLKAAKFSM
Ga0212089_1000581943300022551Lake SedimentMKENILLQETNKGGYTLAIVAKFVEPYPVQYIIRVSPPEGAPVDYMSTLEGFKKIGELLTALHYFAKTKLYPKNTDRLREVLTADTIKSFAEVLKAAKFSV
Ga0212089_1044690633300022551Lake SedimentMKWMNKHNKTENVLLKETNKGGYSLSIIAKFEDPFPVQYSIRISKPEGVEVDFVSTLDGFRNIGELLTALHYFAKTKLYPKDRNRLKEVLTAESIKSFAEVLKAAK
Ga0212121_1042117213300022556Anoxic Lake WaterMSTCENVLLHEKNQGGYGLSIIAKFQEPFPVNYIIRISTPKGVQADFISTLEGFKNIGELLTALHYFAKTKLYPKDTEKLKEVLTADTIKNFAEVLKSAKLSV
Ga0209978_1005451023300024263Deep SubsurfaceMSMPTNENILLQETNKGGYTLAIIAKFEDPFPVQYIIRVSTPEGTEVDYMSTLDGFKNIGELLTALHYFAQTKLYPKNTGRLREVLTAESIKNFAEVLKATKFSV
Ga0209978_1006850213300024263Deep SubsurfaceMSKQANENILLQETNKGGYMLEVIAKFEDPYPVAYIIRVSTPKGKKVDYISTIEGFKNIGDLLTALHYFAKTKLYPKDITKLREVLTAENIKNFAEVLKAAKFSI
Ga0209978_1007022243300024263Deep SubsurfaceMSSPNENVLLKETNKGGYTLSIIARFEEPFPVQYIIRLSTPDGNEVDFMSTLEGFKNIGELLSALHYFAKAKIYPKDTARLKEVLTAENIKNFAEVLKAAKFSV
Ga0209978_1037451713300024263Deep SubsurfaceMSVAENVLMEDSNKGGYRLAIIARFEEPFPVQYKIRVSTPKGFEVDYVSTLEGFKNIGELLTALHYFAKTKLYPKDVHRLKEVLTAENIKNFAEVLTAAKSSM
Ga0209978_1043785513300024263Deep SubsurfaceMEPSENVLLEEVNDGGFRLAIVARFGDPYPVQYRIRVSKPEGVSIDYMSTLEGFKKFGELLTALHYFAQTKLYPQDLQKLREVLTAENIKNFAEVLKSARFSV
Ga0209991_1000142623300024429Deep SubsurfaceMSASENILLEDTNKGGYRLAIVARFEEPFPVQYVIRLSTPKGIEVEYMSTLEGFKNFGELLTALHYFAKTKLYPQDLQKLREVLTAENIKNFAEVLKSARFSV
Ga0209314_1000772743300025143Lake SedimentMVIWMSMKENILLQETNKGGYTLAIVAKFVEPYPVQYIIRVSPPEGAPVDYMSTLEGFKKIGELLTALHYFAKTKLYPKNTDRLREVLTADTIKSFAEVLKAAKFSV
Ga0209323_1018810823300025314SoilLSSCENVLLHEKNQGGYSLAILAKFQEPFPVSYIIRITTPQGVQADFISTLEGFKNIGELLLALHYFAETKLYPKDTEKLKQVLTADTIKNFAEVLKSAKYGV
Ga0256868_1032868223300027811SoilMSACENVLLRETNDGGYSLSIIAKFQDLYPVTYIIRVTKPQGAPIDFISTLDGFKNIGELLVALHHFARTKLYPKNTEKLKEVLTADNIKNFAELLKSGKFGG
Ga0209635_10003118153300027888Marine SedimentLSVYENVLLEDTNKGGYRLAIIARFEEPYPVQYVIRVSTPDDVEVDYMSTLEGFKNIGELLTALSYFAKTKLYPEDPQKLREVLTAESIKSFAEVLKSARFGT
Ga0209635_1004437123300027888Marine SedimentMSCENVLLHEENKGGFSLGIIAKFEESYPVTYIIRITTPQGVQADFMSTLEGFKNIGELLVALRYFAETKLYPKDTEKLREVLTAETIKNFAEVLKSAKLSV
Ga0209635_1014540633300027888Marine SedimentMSMSTNENILLQETNKGGYKLAIVARFEDPYPVQYIIRLSKPDGTEVDYMSTLEGFKNIGELLSALHHFAKTKRYTKNIAKLKEVLTAETIKNFAELLKATKSNE
Ga0209635_1046632523300027888Marine SedimentVKMSKQGNENILLQETNKGGYRLEVIAKFEDPYPVAYIIRLSTPKGKKVDYISTIEGFKNIGDLLTALHYFAKTKLYPKDVSKLREVLTTENIKNFAEVLKAAKFSI
Ga0209635_1079306113300027888Marine SedimentMSENENILLQETNKGNYTLKIIAKFEDPYPVTYVIRVSTPEGTEVDYISTLEGFKNIGELLMALHYFAETKLYPKNTEKLREVLTADTIKNFAEVLESAKFSV
Ga0209635_1112942213300027888Marine SedimentMAFYENVLLQETNKGGYRLSIIARFEEPFPVQYVIRVSSPEGIEVDYMSTLEGFKNIGELLTALHYFAKTKLYPQDPIRLREVLTAENIKNFAEVLK
Ga0209636_10006899123300027893Marine SedimentMSVSENVFLEDTNKGGYKLAIVARFAEPFPVQYVIRLSTPKGANVEYMSTLEGFKNFGELLTALHYFAQTKLYPQDLQKLREVLTAENIKNFAEVLKAAKFSV
Ga0209636_1002115653300027893Marine SedimentMKASENVLLEEVNDGGFRLAIVARFEDPYPVQYRIRVSKPEGVTVDYMSTLEGFRKFGELLTALHYFAQTKLYPKDTQKLREVLTAENIKNFAEVLKSAKFSV
Ga0209636_1002163653300027893Marine SedimentMRGHERGLVMSCENVLLHEENKGGFSLGIIAKFEESYPVTYIIRITTPQGVQADFMSTLEGFKNIGELLVALRYFAETKLYPKDTEKLREVLTAETIKNFAEVLKSAKLSV
Ga0209636_1004066743300027893Marine SedimentMSDSENVLLEDSNKGGYRLAIIAKFEEPFPVQYIIRVSKPDGTGVDYMSTLEGFKNIGALLTALHYFAQTKLYPQDPNRLREVLTAENIKNFAEVLKAAKFSM
Ga0209636_1008364733300027893Marine SedimentMSVCENTLLEDTNKGGYRLAIIARFEEPYPVQYIIRVSTPEGVEVDYMSTLEGFKNIGELLTALHYFAQTKLYPQDPYKLREVLTAEKIKNFAEVLKAAKFGV
Ga0209636_1025905033300027893Marine SedimentVGKQVDENILLKQANKGGYTLAIVARFEDPFPVQYRIRVSKPDGTEVDFVSTIEVFKSIGELLTALHYFAKTKLYPKDTSKLRGVLTAEKIKSFAEVLKAAKFSDTF
Ga0209636_1062550323300027893Marine SedimentMSVSENVLLEDSNKGGYSLAIVARFEEPYPVQYIIRVSTPEGDEVDYMSTLEGFKNIGELLTALHYFAKAKLYPKDVHRLKEVLTAENIKNFAEVLKAAKTSM
Ga0209636_1068702523300027893Marine SedimentMSMSTNENVLVQEINKGGFKLAIVARFVDPYPVQYIIRLSTPEGTEVDYMSTLEGFKNIGELLTALHYFAKTKLYPKNTDKLKEVLTAETIKSFAEVLKSAKFSV
Ga0209636_1077755613300027893Marine SedimentMSMPTNENVLLQETNKGGYTLAIVARFEDPYPVQYVIRLSKPDGTEVDYMSTLEGFKNIGELLTALHYFAETKLYPTNTERLREVLTAENIKNFAEVLKAAKFSV
Ga0209636_1109443113300027893Marine SedimentMGMSTNENILLQETNKGGYKLAIVARFEDPYPVQYIIRLAKPDGTEADYMSTLEGFKNIGELLTALHYFAKTKIYPKNADRLREVLTAETIKSFAEVLKSAKFSV
Ga0209636_1110489913300027893Marine SedimentMSTCENVLLHEENKGGYSLAIIAKFEEPFPVSYVIRVTTPQGVKVDYISTLEGFKNIGELLMALHYFAETKLYPKNTEKLREVLTADTIKNFAEVLESAKFSV
Ga0209777_10000343333300027896Freshwater Lake SedimentMPTCENVLLHEKNNGGYGLAIIAKFEEPFPVSYIIRVTTPQGVQADFVSTLDGFKNIGELLIALHYFAGTKLYPKNTERLREVLTADQIKNFAELLKSGKFGAQRLR
Ga0209427_1061922723300027901Marine SedimentMSTCENVLFHEENKGGYSLAIIAKFEEPFPVSYVIRVTTPQGVKVDYISTLEGFKNIGELLMALHYFAETKLYPKNTEKLREVLTADTIKNFAEVLESAKFSV
Ga0209427_1082739313300027901Marine SedimentMHTNENVLLQETNKGGYKLAIVARFEDPYPVQYIIRLSKPDGTEVEYMSTLEGFKNIGELLTALHYFARTKLYPTDTVRLREVLTAEKIKSFSEVLKAAKFSM
Ga0209536_10092238023300027917Marine SedimentMSSCENVLLHEENKGGYSLEIVAKFEDPFPVSYIIRISTPQGDRADFISNLEGFKNIGELLMALHYFAETKLYPKDTEKLREVLTADSIKNFAEVLKSAKFGV
Ga0299915_1075495323300030613SoilVLLRETNDGGYSLSIIAKFQDPYPVTYIIRVTKPQGAPIDFISTLDGFKNIGELLVTLHHFARTKLYPKNTEKLKEVLTADNIKNFAELLKSGKFGG
Ga0315554_108107813300031255Salt Marsh SedimentMSACENVLLHEENKGGYSLAIIAKFEEPFPVSYIIRVTTPQGVKVDYISTLEGFKNIGELLMALHYFAETKLYPKNTEKLREVLTADTIKSFAEVLKSAKFGV
Ga0307380_1003585163300031539SoilMNTSACENILLQETNKGGYSLAIIAKVEDPYPVTYIIRVSSPKGEAVDYLCTLEGFKNIGDLLTALSHFAQNKLYPKNTAKLGEVLTPENIKNFAELFKAGKFKA
Ga0315548_103586223300031551Salt Marsh SedimentMDMPVNENILLQETNKGGYRLEVIAKFVDPYPVAYIIRVSTPEGTRADYIGTIEGFKNIGALITALHYFAKTKLYPKNTTELRKVLTAETIKNFAEVLKAARFSV
Ga0315548_121822613300031551Salt Marsh SedimentMSENILVEENNKGGYKLEILAKFQDPFPVSYIIRVSTPDGNEVDYLSTLEGFKNIGELLLALHHFAKKKMYPKRPDELREILTAENIKKFAQLMNSAEFKL
Ga0307379_10012463123300031565SoilMNTSACENILLQETNKGGYSLAIIAKVADPYPVTYIIRVSSPKGEAVDYLCTLEGFKNIGDLLTALSHFAQNKLYPKNTAKLGEVLTPENIKNFAELFKAGKFKA
(restricted) Ga0315308_100208633300031587SedimentMAFYENVLLQDTNKGGYRLSIIARFEEPFPVQYVIRVSTPEGIEVDYMSTLEGFKNIGELLTALHYFAKTKLYPHDPIRLREVLTAENIKNFAEVLKSAKFSV
(restricted) Ga0315308_103327323300031587SedimentMPRDENVLLKETNKGGYSLAIIAAFEEPFPVQYLIRVCTPEGDEVDFISTLDGFKNIGELLTALHYFARTKLYPKDRDRLREVLTAQNIKSFAEVLKAARFNL
(restricted) Ga0315308_107080533300031587SedimentRMPRNENVLLKETNKGSYSLAIVARFEEPFPVQYLIRVSTPEGDEVDFLSTLEGFKNIGELLTALHYFAKTKLYPKDRNRLKEVLTAENIKNFAEVLKAAKFDV
(restricted) Ga0315308_110698013300031587SedimentMPRNENVLLKETNKGGYSLSIIAKFEDPFPVQYSIRVSTPEGAEVDFISTLEGFKNIGELLTALHYFAKTKLYPKDKKRLKEVLTAESIKSFAEV
(restricted) Ga0315309_105494733300031604SedimentMKENILLQETNKGGYTLAIVAKFVKPYPVQYIIRVSPPEGTPVDYMSTLEGFKKIGELLTALHYFAKTKLYPKNTDRLREVLTAETIKSFAEVLKAAKFS
(restricted) Ga0315309_110527523300031604SedimentMPRNENVLLKETNKGSYSLAIVARFEEPFPVQYLIRVSTPEGDEVDFLSTLEGFKNIGELLTALHYFAKTKLYPKDRNRLKEVLTAENIKNFAEVLKAAKFDV
(restricted) Ga0315309_122420513300031604SedimentMPRNENVLLKETNKGGYSLSIIAKFEDPFPVQYSIRVSTPEGAEVDFMSTLEGFKNIGELLTALHYFAKTKLYPKDKKRLKEVLTAESIKSFAEVL
Ga0315552_123049313300031620Salt Marsh SedimentMDMPVNENILLQETNKGGYRLEVIAKFEDPYPVAYIIRVSTPEGTRADYIGTIEGFKNIGALITALHYFAKTKLYPKNTTELRKVLTAETIKNFAEVLKAARFSV
Ga0315549_127775123300031654Salt Marsh SedimentMSENILVEETNKGGYKLEILAKFKDHFPVSYIIRVSTPDGNEVDYLSTLEGFKNIGELLLALHHFAKKKMYPKKPDELREVLTAENIKKFTKLM
Ga0315291_1054485923300031707SedimentMSACENVLLRETNDGGYSLSIIAKFQDPYPVTHIIRVTKPQGAPIDFISTLDGFKNIGELLVALHHFARTKLYPKNTEKLKEVLTADNIKNFAELLKSGKFGV
Ga0315293_1059018623300031746SedimentMSACENVLLRETNDGGYSLSIIAKFQDPYPVTYIIRVTKPQGAPIDFRSTLDGFKNIGELLVALHHLARTKLYPKNTEKLKEVLTADNIKNFAELLKSGKFGV
Ga0315288_1007277843300031772SedimentMSACENVLLRETNDGGYSLSIIAKFQDPYPVTYIIRVTKPQGAPIDFISTLDGFKNIGELLVALHHFARTKLYPKNTEKLKEVLTADNIKNFAELLKSGKFGV
Ga0315280_1002267413300031862SedimentMNKHNKTENILLKETNKGGYSLSIIAKFEDPFPVQYSIRISKPEGVEVDFVSTLDGFRNIGELLTALHYFAKTKLYPKDRNRLKEVLTAESIKSFAEVLKAAK
Ga0315297_1012998723300031873SedimentMSACENVLLRETNDGGYSLSIIVKFQDPYPVTYIIRVTKPQGAPIDFISTLDGFKNIGELLVALHHFARTKLYPKNTEKLKEVLTADNIKNFAELLKSGKFGV
(restricted) Ga0315310_1003004533300031876SedimentMPRNENVLLKETNKGGYSLSIIAKFEDPFPVQYSIRVSTPEGAEVDFMSTLEGFKNIGELLTALHYFAKTKLYPKDKKRLKEVLTAESIKSFAEVLKAAK
(restricted) Ga0315310_1004561413300031876SedimentMPRNENVLLKETNKGGYSLSIIAKFEDPFPVQYSIRVSPPKGAEIDFISTLEGFKNIGELLTALHYFAKTKLYPKDKKRLKEVLTAESIKSFAEVLKAAK
(restricted) Ga0315310_1005916223300031876SedimentMAFYENVLLQDTNKGGYRLSIIARFEEPFPVQYVIRVSTPEGIEVDYMSTLEGFKNIGELLTALHYFAKTKLYPQDPIRLREVLTAENIKNFAEVLKSAKFSVW
(restricted) Ga0315310_1011408813300031876SedimentMPRNENVLLKETNKGSYSLAIVARFEEPFPVQYLIRVSTPEGDKVDFLSTLEGFKNIGELLTALHYFAKTKLYPKDRNRLKEVLTAENIKNFAEVLKAAKFDV
(restricted) Ga0315310_1021346623300031876SedimentMVIWMSMKENILLQETNKGGYTLAIVAKFVKPYPVQYIIRVSPPEGTPVDYMSTLEGFKKIGELLTALHYFAKTKLYPKNTDRLREVLTAETIKSFAEVLKAAKFSV
(restricted) Ga0315310_1026386123300031876SedimentMNENILLEETNKGGYTLAIVARFEEPFPVQYIIRVSTPEGTEVDYMSTLDGFKNIGELLTALHYFARTKLYPKNARRLRKVLTAENIKNFAEVLKAAKFSMY
(restricted) Ga0315314_1000319573300031877SedimentMAFYENVLLQDTNKGGYRLSIIARFEEPFPVQYVIRVSSPEGIKVDYMSTLEGFKNIGELLTALHYFAKTKLYPQDPIRLREVLTAENIKNFAEVLKAAKFSV
(restricted) Ga0315314_1000506383300031877SedimentMSVDENVLLKETNKGGYSLAVIARFEDPFPVQYIIRVSPPEGDEVDFISTIEGFKNIGELLTALHYFAKTKLYPTDAFRLKEVLTAENIKNFAEVLKAAKFNV
(restricted) Ga0315314_110942923300031877SedimentMVRLMDNENILLEETNKGGYKLAIVARFEDPIQYIIRVSTRQGDSIDYMSTLEGFKNIGELLTALHYFAKAKIYPKDTAKLREILTAENIKNFAEVLKTAKFSM
(restricted) Ga0315312_10000017753300031898SedimentLAFYENVLLQDANKGGYRLSIIARFEEPFPVQYVIRVSSPEGIEVDYMSTLEGFKKIGELLTALHYFAKTKLYPQDPIRLREVLTAENIKNFAEVLKAAKFSV
(restricted) Ga0315312_1000114553300031898SedimentMSKDIDENILLQETNKGGYKLSIVAKFVEPFPVQYLIRVSTPDGNEIDFICTLGGFKNIGELLTAIHYFAKTKLYPKNKDRLKEVLTAEKIKSFAEVLKEARL
Ga0315289_1153701223300032046SedimentGGYSLAIVAKFQEPYPVSYIIRIATPQGVQADFMSTLDGFKNIGELLMALHYFAETKLYPKDTEKLKEVLTADQIKNFAELLKSGKFKL
Ga0315282_1054737013300032069SedimentMSTCENVLLHEENKGGYSLAIVAKFEEPFPVSYIIRVTTPQGVKVDYISTLEGFKNIGELLVALHYFAETKLYPKNTEKLREVLTADTIKNFAEVLKSAKFSV
Ga0315279_1004922253300032070SedimentMPTCENVLLHEKNNGGYGLAIIAKFEEPFPVSYIIRVTTPQGVQADFVSTLDGFKNIGELLIALHYFAGTKLYPNNTERLREVLTADQIKNFAELLKSGKFGAQRLR
Ga0315279_1067866523300032070SedimentMSSSENELMRETNDGGYSLRIIAKFQDPFPVSYIIRVTPPQGAQVDFISTLEGFKNIGELLMALHHFARTKLYPTDTEKLKKVLTADFIKSFAELKKSGKFSV
Ga0315268_10003089153300032173SedimentMSRVENVLLKESNKGGYSLAIVAAFEEPFPVQYLIRVCPPEGDGVDFISTLDGFKNIGELLMALHYFARTKLYPKDRDRLREVLTAQNIKNFAEVLKAAKFNL
Ga0334965_0325282_220_5403300033991SedimentMLPMSTSENVLLHEKNNGGYSLAVIAKFQEPFPVSYIIRVTTPQGAQVDFMSTLEGFKNIGELLMALHYFAETKLYPKNTEKLKEVLTADTIKNFAEVLKSAKFGV

 ⦗Top⦘


Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.