Metagenome / Metatranscriptome Family F078092

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F078092
Family Type	Metagenome / Metatranscriptome
Number of Sequences	116
Average Sequence Length	55 residues
Representative Sequence	MYETAAIARKSSGDFTVVLTFSLLGLALSLFVIGTAGLIDPEYMANLFLSF
Number of Associated Samples	80
Number of Associated Scaffolds	116

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	55.65 %
% of genes near scaffold ends (potentially truncated)	43.97 %
% of genes from short scaffolds (< 2000 bps)	93.97 %
Associated GOLD sequencing projects	73
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.45

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Bacteria (74.138 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (41.379 % of family members)
Environment Ontology (ENVO)	Unclassified (56.897 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (57.759 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 55.70% β-sheet: 0.00% Coil/Unstructured: 44.30%
Feature Viewer

Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.45
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.45
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 116 Family Scaffolds
PF03328	HpcH_HpaI	24.14
PF01557	FAA_hydrolase	8.62
PF10009	DUF2252	3.45
PF13714	PEP_mutase	1.72
PF03949	Malic_M	1.72
PF00390	malic	0.86
PF09935	DUF2167	0.86

COG ID	Name	Functional Category	% Frequency in 116 Family Scaffolds
COG0469	Pyruvate kinase	Carbohydrate transport and metabolism [G]	24.14
COG2301	Citrate lyase beta subunit	Carbohydrate transport and metabolism [G]	24.14
COG3836	2-keto-3-deoxy-L-rhamnonate aldolase RhmA	Carbohydrate transport and metabolism [G]	24.14
COG0281	Malic enzyme	Energy production and conversion [C]	2.59
COG0686	Alanine dehydrogenase (includes sporulation protein SpoVN)	Amino acid transport and metabolism [E]	1.72

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	74.14 %
Unclassified	root	N/A	25.86 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	74.14 %
Unclassified	root	N/A	25.86 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	74.14 %
Unclassified	root	N/A	25.86 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	32.76 %
Unclassified	root	N/A	25.86 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	30.17 %
Unclassified	root	N/A	25.86 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	25.86 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	17.24 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.86 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	25.86 %
Elioraeaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Elioraeaceae	10.34 %
Acetobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	3.45 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.86 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	25.86 %
Elioraea	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Elioraeaceae → Elioraea	10.34 %
Rhodopila	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Rhodopila	0.86 %
Acidisphaera	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Acidisphaera	0.86 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.86 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	25.86 %
unclassified Elioraea	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Elioraeaceae → Elioraea → unclassified Elioraea	10.34 %
Acidisphaera rubrifaciens	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Acidisphaera → Acidisphaera rubrifaciens	0.86 %
Rhodopila	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Rhodopila	0.86 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.86 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	25.86 %
Elioraea sp. Yellowstone	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Elioraeaceae → Elioraea → unclassified Elioraea → Elioraea sp. Yellowstone	10.34 %
Acidisphaera rubrifaciens	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Acidisphaera → Acidisphaera rubrifaciens	0.86 %
Rhodopila	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Rhodopila	0.86 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.86 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300005332\|Ga0066388_103478255	All Organisms → cellular organisms → Bacteria	804	Open in IMG/M
3300005332\|Ga0066388_107615847	Not Available	543	Open in IMG/M
3300005764\|Ga0066903_101172113	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1424	Open in IMG/M
3300005764\|Ga0066903_106463429	Not Available	611	Open in IMG/M
3300005764\|Ga0066903_107096877	Not Available	580	Open in IMG/M
3300009792\|Ga0126374_10129182	All Organisms → cellular organisms → Bacteria → Proteobacteria	1493	Open in IMG/M
3300010043\|Ga0126380_11712699	All Organisms → cellular organisms → Bacteria	565	Open in IMG/M
3300010048\|Ga0126373_10350686	All Organisms → cellular organisms → Bacteria	1488	Open in IMG/M
3300010048\|Ga0126373_11636118	Not Available	708	Open in IMG/M
3300010048\|Ga0126373_13049486	Not Available	522	Open in IMG/M
3300010154\|Ga0127503_11122103	All Organisms → cellular organisms → Bacteria	603	Open in IMG/M
3300010358\|Ga0126370_10102563	All Organisms → cellular organisms → Bacteria	1983	Open in IMG/M
3300010358\|Ga0126370_12556777	Not Available	510	Open in IMG/M
3300010359\|Ga0126376_10556377	All Organisms → cellular organisms → Bacteria	1075	Open in IMG/M
3300010360\|Ga0126372_12002713	All Organisms → cellular organisms → Bacteria	626	Open in IMG/M
3300010360\|Ga0126372_12830084	Not Available	537	Open in IMG/M
3300010362\|Ga0126377_10854628	All Organisms → cellular organisms → Bacteria	971	Open in IMG/M
3300010366\|Ga0126379_10888392	All Organisms → cellular organisms → Bacteria	993	Open in IMG/M
3300010376\|Ga0126381_100463672	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1779	Open in IMG/M
3300010376\|Ga0126381_101340632	Not Available	1034	Open in IMG/M
3300010376\|Ga0126381_103081511	Not Available	661	Open in IMG/M
3300010376\|Ga0126381_103778346	All Organisms → cellular organisms → Bacteria	592	Open in IMG/M
3300010398\|Ga0126383_11300640	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Elioraeaceae → Elioraea → unclassified Elioraea → Elioraea sp. Yellowstone	817	Open in IMG/M
3300011120\|Ga0150983_14845121	All Organisms → cellular organisms → Bacteria	514	Open in IMG/M
3300012971\|Ga0126369_13338952	All Organisms → cellular organisms → Bacteria	526	Open in IMG/M
3300012989\|Ga0164305_11366314	Not Available	622	Open in IMG/M
3300016270\|Ga0182036_10614664	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Elioraeaceae → Elioraea → unclassified Elioraea → Elioraea sp. Yellowstone	873	Open in IMG/M
3300016270\|Ga0182036_10818648	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	759	Open in IMG/M
3300016270\|Ga0182036_11449815	Not Available	575	Open in IMG/M
3300016294\|Ga0182041_10356416	All Organisms → cellular organisms → Bacteria	1231	Open in IMG/M
3300016294\|Ga0182041_10733947	All Organisms → cellular organisms → Bacteria	878	Open in IMG/M
3300016294\|Ga0182041_10837639	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Elioraeaceae → Elioraea → unclassified Elioraea → Elioraea sp. Yellowstone	824	Open in IMG/M
3300016319\|Ga0182033_12170150	Not Available	507	Open in IMG/M
3300016357\|Ga0182032_12010060	Not Available	507	Open in IMG/M
3300016371\|Ga0182034_11350334	All Organisms → cellular organisms → Bacteria	622	Open in IMG/M
3300016387\|Ga0182040_10599293	All Organisms → cellular organisms → Bacteria	892	Open in IMG/M
3300016387\|Ga0182040_10889683	Not Available	738	Open in IMG/M
3300016387\|Ga0182040_11090850	Not Available	668	Open in IMG/M
3300016404\|Ga0182037_10243869	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Elioraeaceae → Elioraea → unclassified Elioraea → Elioraea sp. Yellowstone	1418	Open in IMG/M
3300016404\|Ga0182037_10863692	All Organisms → cellular organisms → Bacteria	783	Open in IMG/M
3300018058\|Ga0187766_11185675	All Organisms → cellular organisms → Bacteria	552	Open in IMG/M
3300020579\|Ga0210407_10046466	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Rhodopila	3236	Open in IMG/M
3300020579\|Ga0210407_11091797	Not Available	605	Open in IMG/M
3300020580\|Ga0210403_11030092	Not Available	643	Open in IMG/M
3300020581\|Ga0210399_10801254	Not Available	769	Open in IMG/M
3300020581\|Ga0210399_11475570	All Organisms → cellular organisms → Bacteria	529	Open in IMG/M
3300021405\|Ga0210387_10747966	All Organisms → cellular organisms → Bacteria	865	Open in IMG/M
3300021406\|Ga0210386_11348491	Not Available	599	Open in IMG/M
3300021476\|Ga0187846_10082013	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Elioraeaceae → Elioraea → unclassified Elioraea → Elioraea sp. Yellowstone	1399	Open in IMG/M
3300021478\|Ga0210402_10545148	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	1076	Open in IMG/M
3300021560\|Ga0126371_10592387	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Elioraeaceae → Elioraea → unclassified Elioraea → Elioraea sp. Yellowstone	1258	Open in IMG/M
3300021560\|Ga0126371_10592391	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	1258	Open in IMG/M
3300021560\|Ga0126371_10791483	All Organisms → cellular organisms → Bacteria	1095	Open in IMG/M
3300021560\|Ga0126371_13739025	Not Available	513	Open in IMG/M
3300022533\|Ga0242662_10335299	All Organisms → cellular organisms → Bacteria	512	Open in IMG/M
3300031057\|Ga0170834_100904728	All Organisms → cellular organisms → Bacteria	733	Open in IMG/M
3300031057\|Ga0170834_113647842	All Organisms → cellular organisms → Bacteria	537	Open in IMG/M
3300031231\|Ga0170824_125525752	All Organisms → cellular organisms → Bacteria	875	Open in IMG/M
3300031446\|Ga0170820_16684836	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1482	Open in IMG/M
3300031469\|Ga0170819_16304417	All Organisms → cellular organisms → Bacteria	700	Open in IMG/M
3300031474\|Ga0170818_102834892	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Elioraeaceae → Elioraea → unclassified Elioraea → Elioraea sp. Yellowstone	777	Open in IMG/M
3300031474\|Ga0170818_114259400	All Organisms → cellular organisms → Bacteria	645	Open in IMG/M
3300031543\|Ga0318516_10024551	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	3122	Open in IMG/M
3300031543\|Ga0318516_10877277	All Organisms → cellular organisms → Bacteria	505	Open in IMG/M
3300031544\|Ga0318534_10342034	Not Available	861	Open in IMG/M
3300031545\|Ga0318541_10100649	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	1551	Open in IMG/M
3300031545\|Ga0318541_10150195	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	1278	Open in IMG/M
3300031545\|Ga0318541_10221092	All Organisms → cellular organisms → Bacteria	1050	Open in IMG/M
3300031561\|Ga0318528_10024832	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2900	Open in IMG/M
3300031561\|Ga0318528_10067192	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1841	Open in IMG/M
3300031564\|Ga0318573_10501026	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Elioraeaceae → Elioraea → unclassified Elioraea → Elioraea sp. Yellowstone	654	Open in IMG/M
3300031572\|Ga0318515_10381563	All Organisms → cellular organisms → Bacteria	755	Open in IMG/M
3300031573\|Ga0310915_10461873	All Organisms → cellular organisms → Bacteria	902	Open in IMG/M
3300031640\|Ga0318555_10479803	All Organisms → cellular organisms → Bacteria	674	Open in IMG/M
3300031679\|Ga0318561_10186200	All Organisms → cellular organisms → Bacteria	1124	Open in IMG/M
3300031713\|Ga0318496_10531723	Not Available	650	Open in IMG/M
3300031719\|Ga0306917_10086058	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2220	Open in IMG/M
3300031719\|Ga0306917_10281962	All Organisms → cellular organisms → Bacteria	1280	Open in IMG/M
3300031719\|Ga0306917_10331062	All Organisms → cellular organisms → Bacteria → Proteobacteria	1180	Open in IMG/M
3300031744\|Ga0306918_10296901	All Organisms → cellular organisms → Bacteria	1244	Open in IMG/M
3300031747\|Ga0318502_10107321	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1554	Open in IMG/M
3300031748\|Ga0318492_10613413	All Organisms → cellular organisms → Bacteria	581	Open in IMG/M
3300031751\|Ga0318494_10425014	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Elioraeaceae → Elioraea → unclassified Elioraea → Elioraea sp. Yellowstone	772	Open in IMG/M
3300031753\|Ga0307477_10315898	Not Available	1077	Open in IMG/M
3300031763\|Ga0318537_10207482	Not Available	729	Open in IMG/M
3300031764\|Ga0318535_10561024	Not Available	506	Open in IMG/M
3300031770\|Ga0318521_10552641	All Organisms → cellular organisms → Bacteria	694	Open in IMG/M
3300031778\|Ga0318498_10157249	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1035	Open in IMG/M
3300031792\|Ga0318529_10102796	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Elioraeaceae → Elioraea → unclassified Elioraea → Elioraea sp. Yellowstone	1291	Open in IMG/M
3300031795\|Ga0318557_10444177	Not Available	596	Open in IMG/M
3300031796\|Ga0318576_10301538	Not Available	757	Open in IMG/M
3300031799\|Ga0318565_10327670	All Organisms → cellular organisms → Bacteria	743	Open in IMG/M
3300031821\|Ga0318567_10895287	All Organisms → cellular organisms → Bacteria	503	Open in IMG/M
3300031833\|Ga0310917_11062094	All Organisms → cellular organisms → Bacteria	541	Open in IMG/M
3300031879\|Ga0306919_10107998	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Acidisphaera → Acidisphaera rubrifaciens	1970	Open in IMG/M
3300031879\|Ga0306919_10249757	All Organisms → cellular organisms → Bacteria → Proteobacteria	1334	Open in IMG/M
3300031890\|Ga0306925_10307558	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1705	Open in IMG/M
3300031890\|Ga0306925_10312983	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1688	Open in IMG/M
3300031890\|Ga0306925_11136736	All Organisms → cellular organisms → Bacteria	787	Open in IMG/M
3300031896\|Ga0318551_10544295	Not Available	668	Open in IMG/M
3300031910\|Ga0306923_10532442	All Organisms → cellular organisms → Bacteria	1326	Open in IMG/M
3300031910\|Ga0306923_10806996	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Elioraeaceae → Elioraea → unclassified Elioraea → Elioraea sp. Yellowstone	1036	Open in IMG/M
3300031912\|Ga0306921_10601736	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1271	Open in IMG/M
3300031941\|Ga0310912_11325353	All Organisms → cellular organisms → Bacteria	545	Open in IMG/M
3300031942\|Ga0310916_10095282	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2382	Open in IMG/M
3300031942\|Ga0310916_11314391	All Organisms → cellular organisms → Bacteria	595	Open in IMG/M
3300031945\|Ga0310913_10612921	Not Available	772	Open in IMG/M
3300031947\|Ga0310909_11100859	All Organisms → cellular organisms → Bacteria	645	Open in IMG/M
3300031962\|Ga0307479_10074813	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3276	Open in IMG/M
3300032035\|Ga0310911_10866740	All Organisms → cellular organisms → Bacteria	521	Open in IMG/M
3300032039\|Ga0318559_10124882	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Elioraeaceae → Elioraea → unclassified Elioraea → Elioraea sp. Yellowstone	1156	Open in IMG/M
3300032089\|Ga0318525_10101453	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1467	Open in IMG/M
3300032089\|Ga0318525_10704501	All Organisms → cellular organisms → Bacteria	514	Open in IMG/M
3300032094\|Ga0318540_10465424	All Organisms → cellular organisms → Bacteria	611	Open in IMG/M
3300032261\|Ga0306920_100450610	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	1912	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	99.14%
Aquatic	Environmental → Aquatic	0.86%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	98.28%
Freshwater	Environmental → Aquatic → Freshwater	0.86%
Cave	Environmental → Terrestrial → Cave	0.86%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	92.24%
Loam	Environmental → Terrestrial → Soil → Loam	5.17%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	0.86%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	0.86%
Unclassified	Environmental → Terrestrial → Cave → Unclassified	0.86%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	72.41%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	19.83%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	5.17%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	0.86%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.86%
Unclassified	Environmental → Terrestrial → Cave → Unclassified → Unclassified	0.86%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	41.38%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	23.28%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	18.97%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	6.03%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	4.31%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.72%
Soil	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil	0.86%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.86%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	0.86%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	0.86%
Biofilm	Environmental → Terrestrial → Cave → Unclassified → Unclassified → Biofilm	0.86%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010154	Soil microbial communities from Willow Creek, Wisconsin, USA - WC-WI-TBF metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300018058	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_20_MG	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300021405	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-O	Environmental	Open in IMG/M
3300021406	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-O	Environmental	Open in IMG/M
3300021476	Biofilm microbial communities from the roof of an iron ore cave, State of Minas Gerais, Brazil - TC_06 Biofilm (v2)	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300022533	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-7-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300031057	Oak Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031446	Fir Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031469	Fir Spring Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031474	Fir Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031544	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f26	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031561	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f26	Environmental	Open in IMG/M
3300031564	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f21	Environmental	Open in IMG/M
3300031572	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f19	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031640	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f23	Environmental	Open in IMG/M
3300031679	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f23	Environmental	Open in IMG/M
3300031713	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f22	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031747	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f22	Environmental	Open in IMG/M
3300031748	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f22	Environmental	Open in IMG/M
3300031751	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f24	Environmental	Open in IMG/M
3300031753	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_515	Environmental	Open in IMG/M
3300031763	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f29	Environmental	Open in IMG/M
3300031764	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f27	Environmental	Open in IMG/M
3300031770	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f17	Environmental	Open in IMG/M
3300031778	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f24	Environmental	Open in IMG/M
3300031779	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f22	Environmental	Open in IMG/M
3300031792	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f23	Environmental	Open in IMG/M
3300031795	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f19	Environmental	Open in IMG/M
3300031796	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f24	Environmental	Open in IMG/M
3300031799	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f21	Environmental	Open in IMG/M
3300031821	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f20	Environmental	Open in IMG/M
3300031833	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031896	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f19	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032035	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF170	Environmental	Open in IMG/M
3300032039	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f21	Environmental	Open in IMG/M
3300032089	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f23	Environmental	Open in IMG/M
3300032094	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f25	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0066388_1034782552	3300005332	Tropical Forest Soil	MYQTAAVAKKSRGDLTVVMAFSLLGLALSLLAIGKASLIDPEYLATLIASF*
Ga0066388_1076158472	3300005332	Tropical Forest Soil	MYQSAVLAKKSGGDFTVVLTFSLLGLALSLLAIGQAGLIDPEYLATVLVSF*
Ga0066903_1011721131	3300005764	Tropical Forest Soil	MYQSAAVAKKSSGDFTVVMAFSLLGLALSLLAIGKAGLIDPEYLGTLLVSF*
Ga0066903_1064634292	3300005764	Tropical Forest Soil	MMYQTAAVAKKSRGDLTVVIAFSLLGLALSLLAIGKASLIDPEYLATLIASF*
Ga0066903_1070968772	3300005764	Tropical Forest Soil	MYQSAAVARKSDGNFTIVMTFALLGFALSLLLIGKASLIDPEYMATLLLSF*
Ga0126374_101291822	3300009792	Tropical Forest Soil	MMYQSAAVARKSDGNFTIVMTFALLGFALSLLLIGKASLIDPEYMATLLLSF*
Ga0126380_117126991	3300010043	Tropical Forest Soil	LMYQTAAVAKKASGDFTVVMAFSLLGLALSLLAIGKAGLIDPEYLGTLLVSF*
Ga0126373_103506864	3300010048	Tropical Forest Soil	MYQSAAVARKSDGNFTIVMTFALLGFALSLLLIGKASLIDPEYMAALLLSF*
Ga0126373_116361181	3300010048	Tropical Forest Soil	MMYQTAAVAKKSRGDFTVVIAFSLLGLALSLLAIGKASLIDPEYLATLIASF*
Ga0126373_130494861	3300010048	Tropical Forest Soil	PGLGCSILRKTAIPLALFDDVEEVMYEAAAIAKKSSGDFTIVLTFSMLGLALSMLLIGKAGFIDPEHMANLFLSF*
Ga0127503_111221032	3300010154	Soil	MMYQSAAVAKKSSGDFTVVMAFSLLGLAISLLAIGKAGLIDPEYLATLLISF*
Ga0126370_101025632	3300010358	Tropical Forest Soil	MMYQSAAVARKSDGNFTIVMTFALLGFALSLLLIGKASLIDPEYMAALLLSF*
Ga0126370_125567771	3300010358	Tropical Forest Soil	MYETAAIAKKSSGDFSIVLTLSLLGLALSLLLIGRAGFIDPEYMGNLFLSF*
Ga0126376_105563771	3300010359	Tropical Forest Soil	MYQSAAVARKSDGNFTIVMTFALLGFALSLLLIGKASLIDPEYLAALLLSF*
Ga0126372_120027131	3300010360	Tropical Forest Soil	VEEVMYQTAAVAKKSRGDLTVVMAFSLLGLALSLLAIGKASLIDPEYLATLIASF*
Ga0126372_128300842	3300010360	Tropical Forest Soil	MMYQSAAVARKSDGNFTIVMTFALLGFALSLLLISKASLIDPEYMAALLLSF*
Ga0126377_108546281	3300010362	Tropical Forest Soil	GVEEMMYQSAAVARKSDGNFTIVMTFALLGFALSLLLIGKASLIDPEYMAALLLSF*
Ga0126379_108883921	3300010366	Tropical Forest Soil	EMMYQSAAVARKSDGNFTIVMTFALLGFALSLLLIGKESLIDPEYMAALLLSF*
Ga0126381_1004636722	3300010376	Tropical Forest Soil	LALFDDVEEVMYEAAAIAKKSSGDFTIVLTFSMLGLALSMLLIGKAGFIDPEHMANLFLSF*
Ga0126381_1013406322	3300010376	Tropical Forest Soil	MMYQSAAVAKKSRGDFTVVIAFSLLGLALSLLAIGKASLIDPEYLATLIASF*
Ga0126381_1030815112	3300010376	Tropical Forest Soil	MYASVSVAKKSSEDFTVVMMFSLLGLAISLLAIGKAGLIDPEYLATLLASF*
Ga0126381_1037783462	3300010376	Tropical Forest Soil	VEELMYQTAAVAKKSSGDFTVVMAFSLLGLALSLLAIGKAGLIDPEYLGTLLVSF*
Ga0126383_113006402	3300010398	Tropical Forest Soil	MYQSAAVAKKSSGDFTVVMAFSLLGLALSLLAIGKAGLIDPEYLATILV*
Ga0150983_148451211	3300011120	Forest Soil	SHFALIGDVEEVMYESATLARTSSGDLTAVLTFSLLGLALSLLIIGKAGLIDPEYMVNLFLSF*
Ga0126369_133389522	3300012971	Tropical Forest Soil	LFYDVEDIMYETAAIAKKSSGDFSIVLTLSLLGLALSLLLIGRAGFIDPEYMGNLFLSF*
Ga0164305_113663141	3300012989	Soil	MMYQSAAVAKKSSGDFTVVMAFSLLGLAIYLLAIGKAGLIDPEYLATLLISF*
Ga0182036_106146642	3300016270	Soil	MYETAAVAKKSGGKFTIVLTFSLLGLALSLLMLGRAGFIHAEYMANLVLSF
Ga0182036_108186482	3300016270	Soil	VEELMYQSAAVARKSDGNFTIVMTFALLGFALSLLLIGKASLIDPEYMAALLLSF
Ga0182036_114498151	3300016270	Soil	MCLVLLESSHPFGSFHVEEVMYETAAIAEKSSGHFTIVLTLSLLGLALSLFVIGTAGMVDPEAMAKLFLSF
Ga0182041_103564162	3300016294	Soil	MMYQSAAVAKKSRGDFTVVIAFSLLGLALSLLAIGKASLIDPEYLATLIASF
Ga0182041_107339472	3300016294	Soil	VMYETAAIAEKSSGHFTIALTLSLLGLALSLFVIGTAGLIDPEYMANLFLSF
Ga0182041_108376392	3300016294	Soil	MCLVLLESSHPFGSFHVEEVMYETAAIAEKSSGHFTIVLTLSLLGLALSLFVIGTAGLVDPEAMAKLFLSF
Ga0182033_121701502	3300016319	Soil	MYETAAIARKSSGDFTVVLTFSLLGLALSLFVIGTAGLIDPEYMANLFL
Ga0182032_120100602	3300016357	Soil	MYETAAIAEKSSGHFTIVLTLSLLGLALSLFVIGTAGLIDPEYMA
Ga0182034_113503342	3300016371	Soil	FGDVEEVMYESAALARTSSGDLTSVLTFPLLGLAVSLLIIGKAGLIDPEYMVNLFLSF
Ga0182040_105992931	3300016387	Soil	IMYEIAAIAKKSSGDFTVVLTFSLLGLALSLFVIGTAGLIDPEYMANLFLSF
Ga0182040_108896831	3300016387	Soil	MYETAAIARKSSGDFTVVLTFSLLGLALSLFVIGTAGLIDPEYMANLFLSF
Ga0182040_110908501	3300016387	Soil	VEELMYQSAAVARKSDGNFTIVMTFALLGFALSLLLIGKSSLIDPEYMAALLLSF
Ga0182037_102438692	3300016404	Soil	MEEVMYETAAIARKSSGDFTIVLTFSLLGLALSLFVIGTAGLIDPEYMANLFLSF
Ga0182037_108636922	3300016404	Soil	EEMMYQTAAVAKKSRGDLTVVMAFSLLGLALSLLAIGKASLIDPEYLATLIASF
Ga0187766_111856752	3300018058	Tropical Peatland	QRSHPVRSLRRLEEVMYQSAALVRKSSGDFTIVLTFSLLGLALSLLAIGSTGFIDPEQMAHMILSF
Ga0210407_100464662	3300020579	Soil	MYQSAAVAKKSSGDFAVVMAFSLLGLAISLLAIGKAGLIDPEYLATLLISF
Ga0210407_110917971	3300020579	Soil	MYQSAAVAKKSSGDFTVVMAFSLLGLAISLLAIGKAGLIDPEYLATLIASF
Ga0210403_110300922	3300020580	Soil	MYQSVSVARKSSGDFTVVMTFALLGLTLSLLVIGKASLIDPEYMATLLLSF
Ga0210399_108012542	3300020581	Soil	MYESATLARTSSGDLTAVLTFSLLGLALSLLIIGKAGLIDPEYMVNLFLSF
Ga0210399_114755701	3300020581	Soil	FGSLRCVEEIMYQSTAIAKKSSGDLTVVMIFSLLGLALSLFAIGKAGLIDPEYLATLLVS
Ga0210387_107479662	3300021405	Soil	REALRLGSLRCVEEIMYQSTAIAKKSSGDLTVVMIFSLLGLALSLFAIGKAGLIDPEYLATLIASF
Ga0210386_113484911	3300021406	Soil	MMYQSAAVAKKSRGDLTVVMAFSLLGLALSLLAIGKASLIDPEYLATLIASF
Ga0187846_100820131	3300021476	Biofilm	MYETAAIARKSSGDFTIVLTFSLLGLALSLFVIGTAGMIDPEAVANLFLSF
Ga0210402_105451482	3300021478	Soil	VEEIMYQSTAIAKKSSGDLTVVMIFSLLGLALSLFAIGKAGLIDPEYLATLIASF
Ga0126371_105923871	3300021560	Tropical Forest Soil	MYETAAIAKKSSGDFSIVLTLSLLGLALSLLLIGRAGFIDPEYMGNLFLSF
Ga0126371_105923912	3300021560	Tropical Forest Soil	MMYQSAAVARKSDGNFTIVMTFALLGFALSLLLIGKASLIDPEYMAALLLSF
Ga0126371_107914832	3300021560	Tropical Forest Soil	LAVFDDAEEVMYETAAIAKKSSSDFTVVLTFSLLGLALSLLLIGKAGFIDPQYMAGLLLS
Ga0126371_137390252	3300021560	Tropical Forest Soil	MYETVAIAKKSTGDFTVVLTFSLLGLAFSLLLIGKAGFIDPQYMASLLLSF
Ga0242662_103352991	3300022533	Soil	HSRALPIGVEEIMYQSVSVARKSSGDFTVVMTFALLGLTLSLFVIGKASLIDPEYMATLLLSF
Ga0170834_1009047281	3300031057	Forest Soil	SAAVAKKSSGDFTVVMAFSLLGLAISLLAIGKAGLIDPEYLATLIASF
Ga0170834_1136478422	3300031057	Forest Soil	SVSLSPRGVEEMMYQSAAVAKKSSGDFTVVMMFSLLGLAISLLAIGKAGLIDPEYLATLLISF
Ga0170824_1255257521	3300031231	Forest Soil	GSAVFNPRRESPSVSLSPRGVEEMMYQSAAVAKKSSGDFTVVMMFSLLGLAISLLAIGKAGLIDPEYLATLLISF
Ga0170820_166848362	3300031446	Forest Soil	MYQSAAVAKKSSGDFTVVMMFSLLGLAISLLAIGKAGLIDPEYLATLLISF
Ga0170819_163044172	3300031469	Forest Soil	SVSLSPRGVEEMMYQSAAVAKKSSGDFTVVMAFSLLGLAISLLAIGKAGLIDPEYLATLLISF
Ga0170818_1028348922	3300031474	Forest Soil	MYQSTAIAKKSSGDFTVVMIFSLLGLALSLFAIGKAGLIDPEYLATLLVSF
Ga0170818_1142594001	3300031474	Forest Soil	VEEIMYQSTAIAKKSSGDFTVVMIFSLLGLALSLFAIGKAGLIDPEYLATLLVSF
Ga0318516_100245514	3300031543	Soil	MYESAALARTSSGDLTSVLTFPLLGLAVSLLIIGKAGLIDPEYMVNLFLSF
Ga0318516_108772772	3300031543	Soil	LVLLESSHPFGSFHVEEVMYETAAIAEKSSGHFTIVLTLSLLGLALSLFVIGTAGLIDPEYMANLFLSF
Ga0318534_103420342	3300031544	Soil	VFNPPSQGSHFALFGDVEEVMYESAALARTSSGDLTSVLTFPLLGLAVSLLIIGKAGLIDPEYMVNLFLSF
Ga0318541_101006493	3300031545	Soil	QTGAGSTVFNPPSQGSHFALFGDVEEVMYESAALARTSSGDLTSVLTFPLLGLAVSLLIIGKAGLIDPEYMVNLFLSF
Ga0318541_101501952	3300031545	Soil	MYETAAVAKKSGGKFTIVLTFSLLGLALSLLMIGRGGFIDAEYMANLVLSF
Ga0318541_102210922	3300031545	Soil	PFGSFHVEEVMYETAAIAEKSSGHFTIALTLSLLGLALSLFVIGTAGLIDPEYMANLFLS
Ga0318528_100248322	3300031561	Soil	MYETAAIAEKSSGHFTIVLTLSLLGLALSLFVIGTAGLIDPEYMANLFLSF
Ga0318528_100671923	3300031561	Soil	MYEIAAIAKKSSGDFTVVLTFSLLGLALSLFVIGTAGLIDPEY
Ga0318573_105010261	3300031564	Soil	MCLVLLESSHPFGSFHVEEVMYETAAIAEKSSGHFTIVLTLSLLGLALSLFVIGTAGLIDPEYMANLFLSF
Ga0318515_103815632	3300031572	Soil	LREPPSLCSFRCVEEIMYETAAVAKKSGGKFTIVLTFSLLGLALSLLMIGRGGFIDAEYMANLVLSF
Ga0310915_104618731	3300031573	Soil	YEIAAIAKKSSGDFTVVLTFSLLGLALSLFVIGTAGLIDPEYMANLFLSF
Ga0318555_104798032	3300031640	Soil	MCLVLLESSHPFGSFHVEEVMYETAAIAEKSSGHFTIALTLSLLGLALSLFVIGTAGLIDPEYMANLFLSF
Ga0318561_101862001	3300031679	Soil	MYEIAAIAKKSSGDFTVVLTFSLLGLALSLFVIGTAGLIDPEYMANLFLSF
Ga0318496_105317232	3300031713	Soil	LALFDDAEEIMYEIAAIAKKSSGDFTVVLTFSLLGLALSLFVIGTAGLIDPEYMANLFLS
Ga0306917_100860582	3300031719	Soil	MYETAAIAEKSSGHFTIALTLSLLGLALSLFVIGTAGLIDPEYMANLFLSF
Ga0306917_102819622	3300031719	Soil	MYQSAAVARKSDGNFTIVMTFALLGFALSLLLIGKASLIDPEYMAALLLSF
Ga0306917_103310621	3300031719	Soil	SGGKFTIVLTFSLLGLALSLLMIGRGGFIDAEYMANLVLSF
Ga0306918_102969011	3300031744	Soil	MEEVMYETAAIARKSSGDFTIVLTFSLLGLALSLFVIGTPGMIDPEAMANLFLSF
Ga0318502_101073211	3300031747	Soil	MYESAALARTSSGDLTSVLTFPLLGLAVSLLIIGKAGLIDPEYMVNLFL
Ga0318492_106134132	3300031748	Soil	IMYETAAVAKKSGGKFTIVLTFSLLGLALSLLMIGRGGFIDAEYMANLVLSF
Ga0318494_104250141	3300031751	Soil	MYETAAVAKKSGGKFTIVLTFSLLGLALSLLMIGRGGFIDAEYMAN
Ga0307477_103158981	3300031753	Hardwood Forest Soil	VEEVMYESATLARTSSGDLTAVLTFSLLGLALSLLIIGKAGLIDPEYMVNLFLSF
Ga0318537_102074821	3300031763	Soil	MEVVMYETAAIARKSSGDFTIVLTFSLLGLALSLFVIGTAGLIDPEYMANLFLSF
Ga0318535_105610242	3300031764	Soil	MYETAAIARKSSGDFTIVLTFSLLGLALSLFVIGTAGMVDPE
Ga0318521_105526412	3300031770	Soil	FDDVEEVMYETAAIARKSSGDFTIVLTFSLLGLALSLFVIGTAGMVDPEAMAKLFLSF
Ga0318498_101572492	3300031778	Soil	VFNPPSQGSHFALFGDVEEVMYESAALARTSSGDLTAMLTFSLLGLALSLLIIGKAGLIDPEYMVNLFLSF
Ga0318566_105988602	3300031779	Soil	DFTIVLTFSLLGLALSLFVIGTAGMVDPEAMAKLFLSF
Ga0318529_101027962	3300031792	Soil	MYESAALARTSSGDLTSVLTFPLLGLAVSLLIIGKAGLIDPEYMVNLF
Ga0318557_104441771	3300031795	Soil	LALFDDAEEIMYEIAAIAKKSSGDFTVVLTFSLLGLALSGTAGLIDPEYMANLFLSF
Ga0318576_103015382	3300031796	Soil	MYETAAIARKSSGDFTIVLTFSLLGLALSLFVIGTAGMVDPEAMAKLFLSF
Ga0318565_103276702	3300031799	Soil	EEIMYETAAVAKKSGGKFTIVLTFSLLGLALSLLMIGRGGFIDAEYMANLVLSF
Ga0318567_108952872	3300031821	Soil	FHVEEVMYETAAIAEKSSGHFTIVLTLSLLGLALSLFVIGTAGLIDPEYMANLFLSF
Ga0310917_110620942	3300031833	Soil	RAAIPLALFDDAEEIMYEIAAIAKKSSGDFTVVLTFSLLGLALSLFVIGTAGLIDPEYMANLFLSF
Ga0306919_101079983	3300031879	Soil	MYESAALARTSSGDLTAMLTFSLLGLALSLLIIGKAGLIDPEYMVNLFLSF
Ga0306919_102497571	3300031879	Soil	EIAAIAKKSSGDFTVVLTFSLLGLALSLFVIGTAGLIDPEYMANLFLSF
Ga0306925_103075581	3300031890	Soil	MYETAAIARKSSGDFTIVLTFSLLGLALSLFVIGTPGMIDPEAMANLFLSF
Ga0306925_103129832	3300031890	Soil	MYETAAIARKSSGDFTIVLTFSLLGLALSLFVIGTAGLVDPEAMAKLFLSF
Ga0306925_111367362	3300031890	Soil	RFDSVEEVMYETAAIARKSSGDFTVVLTFSLLGLALSLFVIGTAGLIDPEYMANLFLSF
Ga0318551_105442952	3300031896	Soil	MYETAAIARKSSGDFTIVLTFSLLGLALSLFVIGTAGMVDPEAMAKLFL
Ga0306923_105324421	3300031910	Soil	MMYQTAAVAKKSRGDLTVVMAFSLLGLALSLLAIGKASLIDPEYLATLIASF
Ga0306923_108069961	3300031910	Soil	MYETAAIARKSSGDFTIVLTFSLLGLALSLFVIGTAGLVDPEAMAK
Ga0306921_106017362	3300031912	Soil	MEVVMYETAAIARKSSGDFTIVLTFSLLGLALSLFVIGTAGMVDPEAMAKLFLSF
Ga0310912_113253531	3300031941	Soil	RKSDGNFTIVMTFALLGFALSLLLIGKASLIDPEYMAALLLSF
Ga0310916_100952821	3300031942	Soil	YGGSMCLVLLESSHPFGSFHVEEVMYETAAIAEKSSGHFTIVLTLSLLGLALSLFVIGTAGLIDPEYMANLFLSF
Ga0310916_113143911	3300031942	Soil	REAARLALSSDGVEELMYQSAAVARKSDGNFTIVMTFALLGFALSLLLIGKASLIDPEYMAALLLSF
Ga0310913_106129211	3300031945	Soil	MEVVMYETAAIARKSSGDFTIVLTFSLLGLALSLFVIGTAGLVDPEAMAKLFLSF
Ga0310909_111008591	3300031947	Soil	CVEEIMYETAAVAKKSGGKFTIVLTFSLLGLALSLLMIGRGGFIDAEYMANLVLSF
Ga0307479_100748134	3300031962	Hardwood Forest Soil	MYESATLARTSSGDLTAVLTFSLLGLALSLLIIGKAGLIDPEYTVNLFLSF
Ga0310911_108667401	3300032035	Soil	ETAAIARKSSGDFTIVLTFSLLGLALSLFVIGTAGMVDPEAMAKLFLSF
Ga0318559_101248822	3300032039	Soil	MYESAALARTSSGDLTAMLTFSLLGLALSLLIIGKAGLIDPEYMVHLFLSF
Ga0318525_101014533	3300032089	Soil	MYETAAIARKSSGDFTIVLTFSLLGLALSLFVIGTAGMVDPEAMAKLFLS
Ga0318525_107045011	3300032089	Soil	PLREPPSLCSFRCVEEIMYETAAVAKKSGGKFTIVLTFSLLGLALSLLMIGRGGFIDAEYMANLVLSF
Ga0318540_104654241	3300032094	Soil	PPSLCSFRCVEEIMYETAAVAKKSGGKFTIVLTFSLLGLALSLLMIGRGGFTDAEYMANLVLSF
Ga0306920_1004506102	3300032261	Soil	MYQTAAVAKKSRGDLTVVMAFSLLGLALSLLAIGKASLIDPEYLATLIASF

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F078092

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences