NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome Family F077983

Metagenome Family F077983

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F077983
Family Type Metagenome
Number of Sequences 117
Average Sequence Length 48 residues
Representative Sequence MKKIILSTISSLLIGVLLLPGKSAFALDKINVTLPSKSFQFIIFPLAKERGY
Number of Associated Samples 103
Number of Associated Scaffolds 117

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 98.29 %
% of genes near scaffold ends (potentially truncated) 95.73 %
% of genes from short scaffolds (< 2000 bps) 92.31 %
Associated GOLD sequencing projects 100
AlphaFold2 3D model prediction Yes
3D model pTM-score0.30

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Bacteria (73.504 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere
(12.821 % of family members)
Environment Ontology (ENVO) Unclassified
(23.932 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(35.897 % of family members)


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Multiple Sequence Alignments

Select alignment to view:      

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: Yes Secondary Structure distribution: α-helix: 40.00%    β-sheet: 0.00%    Coil/Unstructured: 60.00%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.30
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 117 Family Scaffolds
PF00793DAHP_synth_1 9.40
PF07883Cupin_2 5.13
PF09084NMT1 4.27
PF01638HxlR 3.42
PF01904DUF72 3.42
PF00773RNB 2.56
PF11794HpaB_N 2.56
PF08239SH3_3 1.71
PF07859Abhydrolase_3 1.71
PF12146Hydrolase_4 1.71
PF00296Bac_luciferase 1.71
PF10041DUF2277 1.71
PF00364Biotin_lipoyl 0.85
PF13432TPR_16 0.85
PF13578Methyltransf_24 0.85
PF13549ATP-grasp_5 0.85
PF01850PIN 0.85
PF00528BPD_transp_1 0.85
PF12804NTP_transf_3 0.85
PF12697Abhydrolase_6 0.85
PF13343SBP_bac_6 0.85
PF10604Polyketide_cyc2 0.85
PF01370Epimerase 0.85

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 117 Family Scaffolds
COG0715ABC-type nitrate/sulfonate/bicarbonate transport system, periplasmic componentInorganic ion transport and metabolism [P] 4.27
COG4521ABC-type taurine transport system, periplasmic componentInorganic ion transport and metabolism [P] 4.27
COG1733DNA-binding transcriptional regulator, HxlR familyTranscription [K] 3.42
COG1801Sugar isomerase-related protein YecE, UPF0759/DUF72 familyGeneral function prediction only [R] 3.42
COG0557Exoribonuclease RTranscription [K] 2.56
COG4776Exoribonuclease IITranscription [K] 2.56
COG0657Acetyl esterase/lipaseLipid transport and metabolism [I] 1.71
COG2141Flavin-dependent oxidoreductase, luciferase family (includes alkanesulfonate monooxygenase SsuD and methylene tetrahydromethanopterin reductase)Coenzyme transport and metabolism [H] 1.71

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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms73.50 %
UnclassifiedrootN/A26.50 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
2228664021|ICCgaii200_c0077345All Organisms → cellular organisms → Bacteria512Open in IMG/M
2228664022|INPgaii200_c1194774Not Available596Open in IMG/M
2228664022|INPgaii200_c1195254All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium1034Open in IMG/M
3300000550|F24TB_10183806All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium947Open in IMG/M
3300000550|F24TB_10328533All Organisms → cellular organisms → Bacteria731Open in IMG/M
3300000793|AF_2010_repII_A001DRAFT_10024101All Organisms → cellular organisms → Bacteria1450Open in IMG/M
3300000891|JGI10214J12806_11969686All Organisms → cellular organisms → Bacteria757Open in IMG/M
3300000955|JGI1027J12803_100011233All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium957Open in IMG/M
3300000955|JGI1027J12803_100181059All Organisms → cellular organisms → Bacteria2985Open in IMG/M
3300001372|YBBDRAFT_1208209All Organisms → cellular organisms → Bacteria571Open in IMG/M
3300003987|Ga0055471_10217082All Organisms → cellular organisms → Bacteria600Open in IMG/M
3300003999|Ga0055469_10121929All Organisms → cellular organisms → Bacteria769Open in IMG/M
3300004024|Ga0055436_10187020All Organisms → cellular organisms → Bacteria644Open in IMG/M
3300004024|Ga0055436_10245712All Organisms → cellular organisms → Bacteria570Open in IMG/M
3300004463|Ga0063356_101892579All Organisms → cellular organisms → Bacteria899Open in IMG/M
3300004463|Ga0063356_103536665All Organisms → cellular organisms → Bacteria673Open in IMG/M
3300005218|Ga0068996_10109883Not Available634Open in IMG/M
3300005293|Ga0065715_10446600All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium804Open in IMG/M
3300005332|Ga0066388_104802075Not Available687Open in IMG/M
3300005438|Ga0070701_10870803All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria620Open in IMG/M
3300005451|Ga0066681_10761016Not Available586Open in IMG/M
3300005540|Ga0066697_10113118All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium1587Open in IMG/M
3300005558|Ga0066698_10789052Not Available616Open in IMG/M
3300005568|Ga0066703_10056954All Organisms → cellular organisms → Bacteria2205Open in IMG/M
3300005576|Ga0066708_10098067All Organisms → cellular organisms → Bacteria1736Open in IMG/M
3300005713|Ga0066905_100340960All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium1193Open in IMG/M
3300005896|Ga0075282_1067261All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium536Open in IMG/M
3300005981|Ga0081538_10309343Not Available578Open in IMG/M
3300006034|Ga0066656_10931553Not Available557Open in IMG/M
3300006844|Ga0075428_102405077Not Available541Open in IMG/M
3300006845|Ga0075421_100787552All Organisms → cellular organisms → Bacteria1096Open in IMG/M
3300006852|Ga0075433_10554953All Organisms → cellular organisms → Bacteria1010Open in IMG/M
3300006853|Ga0075420_100148663All Organisms → cellular organisms → Bacteria2056Open in IMG/M
3300006853|Ga0075420_101598285Not Available559Open in IMG/M
3300006854|Ga0075425_100091371All Organisms → cellular organisms → Bacteria3452Open in IMG/M
3300006854|Ga0075425_101687961All Organisms → cellular organisms → Bacteria713Open in IMG/M
3300006854|Ga0075425_103075390All Organisms → cellular organisms → Bacteria509Open in IMG/M
3300006880|Ga0075429_100603251All Organisms → cellular organisms → Bacteria962Open in IMG/M
3300006969|Ga0075419_10178992All Organisms → cellular organisms → Bacteria1397Open in IMG/M
3300007258|Ga0099793_10389343All Organisms → cellular organisms → Bacteria684Open in IMG/M
3300009012|Ga0066710_102777694All Organisms → cellular organisms → Bacteria694Open in IMG/M
3300009147|Ga0114129_11506567All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Afipia → Candidatus Afipia apatlaquensis826Open in IMG/M
3300009153|Ga0105094_10293662All Organisms → cellular organisms → Bacteria936Open in IMG/M
3300009156|Ga0111538_11029902Not Available1041Open in IMG/M
3300009157|Ga0105092_10508046Not Available691Open in IMG/M
3300009162|Ga0075423_11029571All Organisms → cellular organisms → Bacteria875Open in IMG/M
3300009162|Ga0075423_11623089All Organisms → cellular organisms → Bacteria695Open in IMG/M
3300009610|Ga0105340_1345029All Organisms → cellular organisms → Bacteria658Open in IMG/M
3300009818|Ga0105072_1074653All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium662Open in IMG/M
3300009818|Ga0105072_1077783All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium650Open in IMG/M
3300010029|Ga0105074_1012326All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium1364Open in IMG/M
3300010047|Ga0126382_11793604All Organisms → cellular organisms → Bacteria577Open in IMG/M
3300010048|Ga0126373_12788758All Organisms → cellular organisms → Bacteria545Open in IMG/M
3300010333|Ga0134080_10377478All Organisms → cellular organisms → Bacteria651Open in IMG/M
3300010358|Ga0126370_11276453Not Available687Open in IMG/M
3300010360|Ga0126372_11246171All Organisms → cellular organisms → Bacteria770Open in IMG/M
3300010360|Ga0126372_11418595All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium727Open in IMG/M
3300010362|Ga0126377_10384289All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium1410Open in IMG/M
3300010362|Ga0126377_12463916All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium596Open in IMG/M
3300010373|Ga0134128_10271728All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium1900Open in IMG/M
3300010397|Ga0134124_12318937All Organisms → cellular organisms → Bacteria577Open in IMG/M
3300010399|Ga0134127_10292469All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium1565Open in IMG/M
3300010399|Ga0134127_11965399Not Available662Open in IMG/M
3300011420|Ga0137314_1175133Not Available520Open in IMG/M
3300011441|Ga0137452_1217932Not Available648Open in IMG/M
3300012164|Ga0137352_1031367All Organisms → cellular organisms → Bacteria1020Open in IMG/M
3300012168|Ga0137357_1089820Not Available632Open in IMG/M
3300012174|Ga0137338_1129516All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium553Open in IMG/M
3300012199|Ga0137383_11062732Not Available588Open in IMG/M
3300012206|Ga0137380_10364214All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium1288Open in IMG/M
3300012231|Ga0137465_1162137All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium676Open in IMG/M
3300012503|Ga0157313_1016234All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium709Open in IMG/M
3300012951|Ga0164300_10632894All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium637Open in IMG/M
3300012975|Ga0134110_10030990Not Available2089Open in IMG/M
3300013297|Ga0157378_12358343All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → unclassified Gemmatimonadaceae → Gemmatimonadaceae bacterium584Open in IMG/M
3300013306|Ga0163162_12223059Not Available630Open in IMG/M
3300014150|Ga0134081_10016252Not Available2060Open in IMG/M
3300014865|Ga0180078_1035017Not Available807Open in IMG/M
3300014868|Ga0180088_1043883Not Available760Open in IMG/M
3300015255|Ga0180077_1085390Not Available658Open in IMG/M
3300015264|Ga0137403_10108065All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria2785Open in IMG/M
3300015264|Ga0137403_10993787Not Available686Open in IMG/M
3300015373|Ga0132257_104138704Not Available528Open in IMG/M
3300016341|Ga0182035_11293621All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium653Open in IMG/M
3300016357|Ga0182032_11212638All Organisms → cellular organisms → Bacteria650Open in IMG/M
3300018031|Ga0184634_10423677All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium604Open in IMG/M
3300018077|Ga0184633_10078100All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium1701Open in IMG/M
3300018079|Ga0184627_10305261All Organisms → cellular organisms → Bacteria834Open in IMG/M
3300018084|Ga0184629_10331636All Organisms → cellular organisms → Bacteria801Open in IMG/M
3300018422|Ga0190265_12812874Not Available581Open in IMG/M
3300019889|Ga0193743_1056171All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium1669Open in IMG/M
3300021073|Ga0210378_10108159All Organisms → cellular organisms → Bacteria1082Open in IMG/M
3300021080|Ga0210382_10069303All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium1424Open in IMG/M
3300021081|Ga0210379_10118164All Organisms → cellular organisms → Bacteria1112Open in IMG/M
3300021560|Ga0126371_10843731All Organisms → cellular organisms → Bacteria1061Open in IMG/M
3300025930|Ga0207701_10520578All Organisms → cellular organisms → Bacteria1017Open in IMG/M
3300025936|Ga0207670_11679188Not Available540Open in IMG/M
3300025939|Ga0207665_10811215Not Available740Open in IMG/M
3300026001|Ga0208000_108759All Organisms → cellular organisms → Bacteria634Open in IMG/M
3300026315|Ga0209686_1196381Not Available551Open in IMG/M
3300026324|Ga0209470_1352146Not Available528Open in IMG/M
3300026536|Ga0209058_1076939Not Available1766Open in IMG/M
3300027573|Ga0208454_1002313All Organisms → cellular organisms → Bacteria → Proteobacteria6581Open in IMG/M
3300027654|Ga0209799_1038174All Organisms → cellular organisms → Bacteria1069Open in IMG/M
3300027909|Ga0209382_10688145All Organisms → cellular organisms → Bacteria1102Open in IMG/M
3300030006|Ga0299907_10975159All Organisms → cellular organisms → Bacteria625Open in IMG/M
3300030619|Ga0268386_10165212All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium1678Open in IMG/M
3300031170|Ga0307498_10073066All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium993Open in IMG/M
3300031720|Ga0307469_11880089All Organisms → cellular organisms → Bacteria579Open in IMG/M
3300031740|Ga0307468_101520711All Organisms → cellular organisms → Bacteria621Open in IMG/M
3300031901|Ga0307406_10994263All Organisms → cellular organisms → Bacteria719Open in IMG/M
3300031962|Ga0307479_10772496All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium937Open in IMG/M
3300032017|Ga0310899_10604631All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium549Open in IMG/M
3300032180|Ga0307471_102092031All Organisms → cellular organisms → Bacteria711Open in IMG/M
3300032205|Ga0307472_100265359All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium1357Open in IMG/M
3300034150|Ga0364933_087502All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium784Open in IMG/M
3300034178|Ga0364934_0003114All Organisms → cellular organisms → Bacteria → Proteobacteria5693Open in IMG/M


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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere12.82%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil11.97%
SoilEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Soil9.40%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil6.84%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil5.13%
Natural And Restored WetlandsEnvironmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands4.27%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil4.27%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil4.27%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment3.42%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil3.42%
Groundwater SedimentEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment2.56%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil2.56%
SoilEnvironmental → Terrestrial → Soil → Loam → Grasslands → Soil2.56%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil2.56%
Groundwater SandEnvironmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand2.56%
Freshwater SedimentEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment1.71%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil1.71%
Rice Paddy SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Rice Paddy Soil1.71%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere1.71%
SedimentEnvironmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment1.71%
Arabidopsis Thaliana RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere1.71%
Marine EstuarineEnvironmental → Aquatic → Marine → Intertidal Zone → Sediment → Marine Estuarine0.85%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil0.85%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Corn, Switchgrass And Miscanthus Rhizosphere0.85%
Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil0.85%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural → Soil0.85%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere0.85%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere0.85%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Miscanthus Rhizosphere0.85%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Rhizosphere0.85%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere0.85%
Tabebuia Heterophylla RhizosphereHost-Associated → Plants → Roots → Rhizosphere → Unclassified → Tabebuia Heterophylla Rhizosphere0.85%
RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere0.85%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere0.85%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
2228664021Soil microbial communities from Great Prairies - Iowa, Continuous Corn soilEnvironmentalOpen in IMG/M
2228664022Soil microbial communities from Great Prairies - Iowa, Native Prairie soilEnvironmentalOpen in IMG/M
3300000550Amended soil microbial communities from Kansas Great Prairies, USA - BrdU amended with acetate total DNA F2.4 TB clc assemlyEnvironmentalOpen in IMG/M
3300000793Forest soil microbial communities from Amazon forest - 2010 replicate II A001EnvironmentalOpen in IMG/M
3300000891Soil microbial communities from Great Prairies - Wisconsin, Continuous corn soilEnvironmentalOpen in IMG/M
3300000955Soil microbial communities from Great Prairies - Iowa, Native Prairie soilEnvironmentalOpen in IMG/M
3300001372YB-Back-sedEnvironmentalOpen in IMG/M
3300003987Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_TuleB_D2EnvironmentalOpen in IMG/M
3300003999Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_TuleA_D2EnvironmentalOpen in IMG/M
3300004024Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_ThreeSqB_D2EnvironmentalOpen in IMG/M
3300004463Combined assembly of Arabidopsis thaliana microbial communitiesHost-AssociatedOpen in IMG/M
3300005218Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Sandmound_ThreeSqC_D2EnvironmentalOpen in IMG/M
3300005293Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1Host-AssociatedOpen in IMG/M
3300005332Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300005438Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaGEnvironmentalOpen in IMG/M
3300005451Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_130EnvironmentalOpen in IMG/M
3300005540Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_146EnvironmentalOpen in IMG/M
3300005558Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147EnvironmentalOpen in IMG/M
3300005568Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_152EnvironmentalOpen in IMG/M
3300005576Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157EnvironmentalOpen in IMG/M
3300005713Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)EnvironmentalOpen in IMG/M
3300005896Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_10C_80N_204EnvironmentalOpen in IMG/M
3300005981Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1Host-AssociatedOpen in IMG/M
3300006034Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_105EnvironmentalOpen in IMG/M
3300006844Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2Host-AssociatedOpen in IMG/M
3300006845Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5Host-AssociatedOpen in IMG/M
3300006852Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2Host-AssociatedOpen in IMG/M
3300006853Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD4Host-AssociatedOpen in IMG/M
3300006854Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4Host-AssociatedOpen in IMG/M
3300006880Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3Host-AssociatedOpen in IMG/M
3300006969Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3Host-AssociatedOpen in IMG/M
3300007258Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3EnvironmentalOpen in IMG/M
3300009012Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159EnvironmentalOpen in IMG/M
3300009147Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)Host-AssociatedOpen in IMG/M
3300009153Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (3) Depth 10-12cm March2015EnvironmentalOpen in IMG/M
3300009156Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)Host-AssociatedOpen in IMG/M
3300009157Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 19-21cm March2015EnvironmentalOpen in IMG/M
3300009162Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2Host-AssociatedOpen in IMG/M
3300009610Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT700EnvironmentalOpen in IMG/M
3300009818Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N1_30_40EnvironmentalOpen in IMG/M
3300010029Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S1_10_20EnvironmentalOpen in IMG/M
3300010047Tropical forest soil microbial communities from Panama - MetaG Plot_30EnvironmentalOpen in IMG/M
3300010048Tropical forest soil microbial communities from Panama - MetaG Plot_11EnvironmentalOpen in IMG/M
3300010333Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_2_24_1 metaGEnvironmentalOpen in IMG/M
3300010358Tropical forest soil microbial communities from Panama - MetaG Plot_3EnvironmentalOpen in IMG/M
3300010360Tropical forest soil microbial communities from Panama - MetaG Plot_6EnvironmentalOpen in IMG/M
3300010362Tropical forest soil microbial communities from Panama - MetaG Plot_22EnvironmentalOpen in IMG/M
3300010373Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4EnvironmentalOpen in IMG/M
3300010397Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4EnvironmentalOpen in IMG/M
3300010399Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3EnvironmentalOpen in IMG/M
3300011420Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT199_2EnvironmentalOpen in IMG/M
3300011441Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT513_2EnvironmentalOpen in IMG/M
3300012164Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT730_2EnvironmentalOpen in IMG/M
3300012168Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT860_2EnvironmentalOpen in IMG/M
3300012174Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT366_2EnvironmentalOpen in IMG/M
3300012199Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaGEnvironmentalOpen in IMG/M
3300012206Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaGEnvironmentalOpen in IMG/M
3300012231Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT828_2EnvironmentalOpen in IMG/M
3300012503Arabidopsis rhizosphere microbial communities from North Carolina - M.Col.5.old.080610_RHost-AssociatedOpen in IMG/M
3300012951Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MGEnvironmentalOpen in IMG/M
3300012975Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_11112015EnvironmentalOpen in IMG/M
3300013297Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaGHost-AssociatedOpen in IMG/M
3300013306Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaGHost-AssociatedOpen in IMG/M
3300014150Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_20cm_5_24_1 metaGEnvironmentalOpen in IMG/M
3300014865Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT499_16_10DEnvironmentalOpen in IMG/M
3300014868Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT830_16_10DEnvironmentalOpen in IMG/M
3300015255Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT466_16_10DEnvironmentalOpen in IMG/M
3300015264Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300015373Combined assembly of cpr5 rhizosphereHost-AssociatedOpen in IMG/M
3300016341Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170EnvironmentalOpen in IMG/M
3300016357Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000EnvironmentalOpen in IMG/M
3300018031Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_200_b1EnvironmentalOpen in IMG/M
3300018077Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_170_b1EnvironmentalOpen in IMG/M
3300018079Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_127_b1EnvironmentalOpen in IMG/M
3300018084Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_32_b1EnvironmentalOpen in IMG/M
3300018422Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 124 TEnvironmentalOpen in IMG/M
3300019889Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L2c2EnvironmentalOpen in IMG/M
3300021073Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_60_b1 redoEnvironmentalOpen in IMG/M
3300021080Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_coex redoEnvironmentalOpen in IMG/M
3300021081Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_32_coex redoEnvironmentalOpen in IMG/M
3300021560Tropical forest soil microbial communities from Panama - MetaG Plot_4EnvironmentalOpen in IMG/M
3300025930Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)EnvironmentalOpen in IMG/M
3300025936Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025939Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300026001Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_25C_80N_104 (SPAdes)EnvironmentalOpen in IMG/M
3300026315Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_126 (SPAdes)EnvironmentalOpen in IMG/M
3300026324Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125 (SPAdes)EnvironmentalOpen in IMG/M
3300026536Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147 (SPAdes)EnvironmentalOpen in IMG/M
3300027573Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT100 (SPAdes)EnvironmentalOpen in IMG/M
3300027654Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 MoBio (SPAdes)EnvironmentalOpen in IMG/M
3300027909Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)Host-AssociatedOpen in IMG/M
3300030006Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT152D67EnvironmentalOpen in IMG/M
3300030619Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT150D86 (Novaseq)EnvironmentalOpen in IMG/M
3300031170Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 12_SEnvironmentalOpen in IMG/M
3300031720Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515EnvironmentalOpen in IMG/M
3300031740Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05EnvironmentalOpen in IMG/M
3300031901Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2Host-AssociatedOpen in IMG/M
3300031962Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515EnvironmentalOpen in IMG/M
3300032017Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D4EnvironmentalOpen in IMG/M
3300032180Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515EnvironmentalOpen in IMG/M
3300032205Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05EnvironmentalOpen in IMG/M
3300034150Sediment microbial communities from East River floodplain, Colorado, United States - 25_j17EnvironmentalOpen in IMG/M
3300034178Sediment microbial communities from East River floodplain, Colorado, United States - 27_j17EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
ICCgaii200_007734522228664021SoilMKQIILSIISLLLIGAWLLPGRSVFALDKVNVTLPSKSFQFIIFPLAKERGYMKEEGIDLNTV
INPgaii200_119477422228664022SoilMKKITLSMVSPLLISVLLLPGRSAFAVDKVNVTLPSKSFQF
INPgaii200_119525412228664022SoilMKKITLSMVSPLLISVLLLPGRSAFAVDKVNVTLPSKSFQFIIFPLAKE
F24TB_1018380623300000550SoilMKKIILSMISLLLIGVLLLPSQWAFALDKINVTLPSKSFQFIIFP
F24TB_1032853323300000550SoilMKKIIPSMISSLLIGVLLLPGKSVFGLDKVNVTLPSKSFQFIIFP
AF_2010_repII_A001DRAFT_1002410123300000793Forest SoilMKKIIPSMISPLLIGVLLLPCEAAFALDKVSVTLPAKSLQFIIFPLAKERGYMKEEGIDLNIVVMAA
JGI10214J12806_1196968613300000891SoilMIKITLWMIGPLLVGVLSLPGQSAFALDRINVTLPSKSFQFII
JGI1027J12803_10001123323300000955SoilMKKITLSMVSPLLISVLLLPGRSAFAVDKVNVTLPSKSFQFIIFPLA
JGI1027J12803_10018105943300000955SoilMVKIIPSTISSLLIGVLLLADQSALALDKVNVTLPSKSFQFIIFPLA
YBBDRAFT_120820923300001372Marine EstuarineMKRITLSMVLALLIGVLLLSGRAALALDTVNVTLPSKSFQFIIFPLAKERGYMK
Ga0055471_1021708223300003987Natural And Restored WetlandsVKKIILSMLSLLIGVWSLAGEAAFALEKVNVTLPSKSFQFIIFPLARERGYMKEE
Ga0055469_1012192923300003999Natural And Restored WetlandsMKKFIHMIVWPVAMGFLLLPGKSTLALDKINVTLPSKSFQFIIFPLAKERGYMK
Ga0055436_1018702013300004024Natural And Restored WetlandsMKKIILSMLAPLLIGMLSLPGKAALALDRINVTLPSKSFQFIVFPLAK
Ga0055436_1024571213300004024Natural And Restored WetlandsMKNIVLTMIAILMLGVLLLPGKSSFALDKINVTLPSKSFQFIIF
Ga0063356_10189257913300004463Arabidopsis Thaliana RhizosphereMKKITLSMIAPLLIGMLLLPGKSVFALDRINVTLPSKSFQFIIFPLAKERGYMKEE
Ga0063356_10353666513300004463Arabidopsis Thaliana RhizosphereMKQIILSMISPLLVSMLLLPAKAALALDKINVTLPSKSFQFIIFPLAKERGYMKEE
Ga0068996_1010988323300005218Natural And Restored WetlandsMKKIILSMLAPLLIGMLSLPGKAALALDRINVTLPSKSFQFI
Ga0065715_1044660023300005293Miscanthus RhizosphereMKKIVSITSPLMIVLCLFHSQPAFALDRVNITLPSKSFQFIIFPLAKERGY
Ga0066388_10480207513300005332Tropical Forest SoilMKKIIPSMISPLLIGVLLLPSEAAFALDKVSVTLPAKSLQFIIFPL
Ga0070701_1087080323300005438Corn, Switchgrass And Miscanthus RhizosphereMKKLIMPMISSLLIGVLLLPGKSAFALDKINVTLPSKSFQFIIFPLAKERGYMKE
Ga0066681_1076101613300005451SoilMSKITSSMISSLLIGVLLLPGQPAFALDKINVTLPSKSFQFIIFPLAKERGYM
Ga0066697_1011311813300005540SoilMSKITSSMISSLLIGVLLLPGQPAFALDKINVTLPSKSFQFIIFPLA
Ga0066698_1078905213300005558SoilMSKITSSMISSLLIGVLLLPGQPAFALDKINVTLPSKSFQFIIFPLAKERGYMKE
Ga0066703_1005695413300005568SoilMKKIILSTTASLLIGVLLPSVKSAFALDKVNVTLPSKSFQFIIFPLAKERGYMKE
Ga0066708_1009806733300005576SoilMTKITSSMISALLIGVFLLPGKSAFAVDKINVTLPSKSFQFIIFPLAKERGYMKEEGIDL
Ga0066905_10034096023300005713Tropical Forest SoilMQKITLSMISPLLIGVLLLRSQPALALDRVNVTLPSKS
Ga0075282_106726113300005896Rice Paddy SoilMKKIILSMIAPLLIGLLLLPGRSTFALDKVNVTLPSKSFQFIIFPLAKERGYMKEEGID
Ga0081538_1030934313300005981Tabebuia Heterophylla RhizosphereMKKIILSMISMLVVSVSLLPEKAAFALDKVNVTLPSKSFQFIIFPLSKERG
Ga0066656_1093155313300006034SoilMKKIIPSMISSLLIGVLLLPGQSALALDKINVTLPSKSFQFIIFP
Ga0075428_10240507713300006844Populus RhizosphereMKQVILSMISLLLIGLLLLPGRAASAFDKINVTLPSKSFQFIIFPLAKERGYM
Ga0075421_10078755223300006845Populus RhizosphereMKQIILSIISSLLVSLLLLPAKAAFTLDKINVTLPSKSFQFIIFPLAKE
Ga0075433_1055495323300006852Populus RhizosphereMKKIILSTTASLLIGVLLPSVKSAFALDKVNVTLPSKSFQFIIFPLAKERGYMKEEGIDLNV
Ga0075420_10014866333300006853Populus RhizosphereMKKIILSMISLLLIGVLLLPSQWALALDKINVTLPSKSFQFIIFPLAN*
Ga0075420_10159828523300006853Populus RhizosphereMKQIILSMISLLLIGLLLLPGKAASALDKINVTLPSKSFQFIIFPLAKER
Ga0075425_10009137143300006854Populus RhizosphereMKKIIPSTISSLLIGVLLLADQSALALDKVNVTLPSKSF
Ga0075425_10168796113300006854Populus RhizosphereMKKIILSTTASLLIGVLLPSVKSAFALDKVNVTLPSKSFQFIIFPLAKERGYM
Ga0075425_10307539023300006854Populus RhizosphereMKKIISSMISPLLVGVLLLPGKAAFALDKVSVTLPAKSLQFIIFPVAKERGYMKEEGIDLNIV
Ga0075429_10060325113300006880Populus RhizosphereMIKLTLWMIGPLLVGVLSLPGQSAFALDKINVTLPSKSFQFIIFP
Ga0075419_1017899213300006969Populus RhizosphereMKKIVLSMISLLLIGVLLLPSQWALALDKINVTLPSKS
Ga0099793_1038934313300007258Vadose Zone SoilMKKIILSTTASLLIGVLLLPGKSAFALDKINVTLPSKSFQFIIFPLAKERG
Ga0066710_10277769423300009012Grasslands SoilMKKITLSMVSPLLISVLLLPGKSAFALDKINVTLPSKSFQFIIFPLAKE
Ga0114129_1150656723300009147Populus RhizosphereMKQIILSMISLLLIGLLLLPGRAASAFDKINVTLPSKSFQFIIF
Ga0105094_1029366213300009153Freshwater SedimentMKRITPSVLAPLLMGVLLLSGKAAFGLDRINVTLPSKSFQFIIFPLAKERGYMKEE
Ga0111538_1102990213300009156Populus RhizosphereMKKIILSMISPLLIGVLLLPGKSVFGLDKINVTLPSKSFQFII
Ga0105092_1050804613300009157Freshwater SedimentMKSIILSMVSPLLIGVLLLPGPSTFALDKVNVTLPSKSFQFIIF
Ga0075423_1102957113300009162Populus RhizosphereMKKIILSTTASLLIGVLLPSVKSAFALDKVNVTLPSKSFQFIMFPLAKERGYMKEEGID
Ga0075423_1162308913300009162Populus RhizosphereMKKIAVSVIFPLLIGVLLLSDRSAFALDKVNVTLPSKSFQFIIFPLAK
Ga0105340_134502923300009610SoilMKQIILSMISPLLVGMLLLPAKAVFGLDKINVTLPSKSFQFIIFPLAKERGYMKE
Ga0105072_107465323300009818Groundwater SandMTKIILSMISPLLIGVLLLPGKSAFALDKVNVTLPSKSFQFIIFPLAKERGYMK
Ga0105072_107778323300009818Groundwater SandMTKIILSMISPLLIGVLLLPGKAAFALDKVNVTLPSKSFQFIIFPLAKERGYM
Ga0105074_101232613300010029Groundwater SandMTISTKMMVWSFLFGTLLFPTKSAFTLDKVNVTLPSKSFQFIIFPLAKERGYMKEEG
Ga0126382_1179360413300010047Tropical Forest SoilMKKIIPSMISPLLIGVLLLPSEAAFALDKVSVTLPAKSLQFIIFPLAKERGYMKEEGID
Ga0126373_1278875823300010048Tropical Forest SoilMNKIIASMISALLITLFLLSQTTFAVDKVNVTLPSKSFQFIIFPLARERGYMK
Ga0134080_1037747813300010333Grasslands SoilMRKIILSMIASLLIGVLLLPGKSAFALDKINVTLPSKSF
Ga0126370_1127645323300010358Tropical Forest SoilMKKIIPSMISPLLIGVLLLPSEAAFALDKVSVTLPAKSLQFIIFPLA
Ga0126372_1124617113300010360Tropical Forest SoilMKKIISSMTSPLLIGVLLLPGKATFALDKVSVTLPAKSLQFIIFPVAKERGYMKE
Ga0126372_1141859523300010360Tropical Forest SoilMKRIILPMISSLLFSVSLLLGQPAIALDKVNVTLP
Ga0126377_1038428923300010362Tropical Forest SoilMKKITLSMISPLLIGVLLLPGQSVFAFDKVNVTLPSKSFQFIIFPL
Ga0126377_1246391613300010362Tropical Forest SoilMKRIILSMISSLLFSVLLLSGQSAIALDKVNVTLPSKSFQFIIFPLAKERGYMKEEGI
Ga0134128_1027172813300010373Terrestrial SoilMKKILSITSPLMIVLCLFHSQPAFALDRVNVTLPSK
Ga0134124_1231893713300010397Terrestrial SoilMKTICALVIALLLGAQAAFALDRVNVTLPSKSFQFIIFPLAKER
Ga0134127_1029246933300010399Terrestrial SoilMKKILSITSPLMIVLCLFHSQPAFALDRVNVTLPS
Ga0134127_1196539923300010399Terrestrial SoilMKKIILSMSSSLLIGVLLLYSKSAFALDKINVTLPSKS
Ga0137314_117513323300011420SoilMKKIILSMISSLLIAVLLLPGESGFALDKINVTLPSKSFQFIIFPHAKERGYMKEEG
Ga0137452_121793213300011441SoilMKKITASVLAPLLIGMLWLPGKAAFALDRINVTLPSKSFQFIIFPLAKERGYMKDEGIDLNTVI
Ga0137352_103136723300012164SoilMKKFIAMISWSLVIGALLLPGKSAFALDKVNVTLPS
Ga0137357_108982013300012168SoilMKSIILSIISPLLIGVALLPGSLTFALDKVNVTLPSKSFQFII
Ga0137338_112951623300012174SoilMKSIIRSMISPLLIGVLLLPDQSTFALDKVNVTLPSKSF
Ga0137383_1106273213300012199Vadose Zone SoilMSKIISSMISSLLIGVLLLPGQPAFAIDKINVTLPSKSFQFIIFPLAKE
Ga0137380_1036421423300012206Vadose Zone SoilMKKIIPSMISSLLIGVLLLPGKSAFAIDKINVTLPSKSFQFIIFPLAKE
Ga0137465_116213713300012231SoilMKKIILSMVAALLIGVLLLPGKAAFALDRINVTLPSK
Ga0157313_101623423300012503Arabidopsis RhizosphereMKKIILITSPLLIALCLVRPQPAFALDKVNVTLPSKSFQFIIF
Ga0164300_1063289413300012951SoilMKKIIPSMIAALLIGVLLLPGKSAFAVDKINVTLPSKSFQFIIFPLAKERGYMKEEGID
Ga0134110_1003099023300012975Grasslands SoilMKKIIPSMISPLLIGVLLLPGKSAFAIDKINVTLPSKSFQFIIFPLAKERGYM
Ga0157378_1235834313300013297Miscanthus RhizosphereMINNIILLAGVLLLINQAAFALDKINVTLPSKSFQFIIFPLAKE
Ga0163162_1222305913300013306Switchgrass RhizosphereMKKLILSMISPLPIGVLFHPSQSALALDKVNVTLPSKSFQFISFPLANGLN*
Ga0134081_1001625223300014150Grasslands SoilMKKIIPSMISPLLIGVLLLPGKSAFAIDKINVTLPS
Ga0180078_103501713300014865SoilMKNMILSMISPLLIGVLLFPGKAAFALDKINVTLPSKSFQFIIFP
Ga0180088_104388313300014868SoilMKSIILSMISPLLIGVALLPGSSTFALDKVNVTLPSKSFQFIIFPLAKERGYMKEE*
Ga0180077_108539013300015255SoilMKSIILSMISPLLIGVLLLPDQSTFALDKVNVTLPSKSFQFIIFPLAKERGYMKEEG
Ga0137403_1010806533300015264Vadose Zone SoilMKQIILSVISSVLIGVLLLPCKSAFALDKINVTLPSKSFQFIIFPLAKERGYMKE
Ga0137403_1099378713300015264Vadose Zone SoilMKKIIPSMIAALLIGVLLLPDKSAFALDKINVTLPSKSFQFIIFPLANERG
Ga0132257_10413870413300015373Arabidopsis RhizosphereMKKIASITAPLLIALCLARPQPAFSLEKVNVTLPSKSFQFIIFPLAKERGYM
Ga0182035_1129362113300016341SoilMKKIITSVISPLLIGVLLLPGKSAFAVDKVNVTLPSKSFQFIIFPLAKERGYM
Ga0182032_1121263813300016357SoilMKKIIASMISALLITLFLLSRTTFAVDKVNVTLPSKSFQFIIFPLARERGYMKEEGIDLN
Ga0184634_1042367713300018031Groundwater SedimentMKKIILSMISPLLAGVLLLPGKAASADKINVTLPSKSFQF
Ga0184633_1007810013300018077Groundwater SedimentMKKIIPLMISPLLIGVLFFPGQAAFALDKINVTLPSKSFQFIIFPLAKERSYMKEE
Ga0184627_1030526123300018079Groundwater SedimentMKKIILSVISPLLIGVLLLPGKSAFALDKVNVTLPSKSFQFIIFP
Ga0184629_1033163633300018084Groundwater SedimentMKKIILSMVSSVLIGVWMLPDKSASSLDKVNVTLP
Ga0190265_1281287413300018422SoilMKKIILSMIPPLLVVVALLAGKSVFALDRVNVTLPSKSFQFIIFPIAKERGYMKEE
Ga0193743_105617113300019889SoilMKKLILSMISSLLIGVLLHPSQSAFALDKINVTLPSKSFQFIIFPLAIGLN
Ga0210378_1010815933300021073Groundwater SedimentMKKIILSTISSLLIGVLLLPGKSAFALDKINVTLPSKSFQFIIFPLAKERGY
Ga0210382_1006930313300021080Groundwater SedimentMKKIILSMISSLLIGVLSLPVKSAFALDKVNVTLP
Ga0210379_1011816423300021081Groundwater SedimentMKKFIAMISWSLVIGALLLPAKSALALDKVNVTLPSKSFQFIIFPLAKER
Ga0126371_1084373113300021560Tropical Forest SoilMNKIIASMISALLITLFLLSQTTFAVDKVNVTLPSKSFQFSIFPLARERGYMKEEGI
Ga0207701_1052057813300025930Corn, Switchgrass And Miscanthus RhizosphereMKKLILSMISSLLVGVLFHPSQSAFALDKVNVTLPSKSFQFISFPLANGLN
Ga0207670_1167918823300025936Switchgrass RhizosphereMKKLILSMISSLLVGVLFHPSQSAFALDKVNVTLPSK
Ga0207665_1081121513300025939Corn, Switchgrass And Miscanthus RhizosphereMKKITLSMVSPLLISVLLLPGRSAFAVDKVNVTLPSKSFQFIIFPLAKERGYMK
Ga0208000_10875913300026001Rice Paddy SoilMQEIMLSMISPLLIALLLLPGRPAWALDRVNVTLPSKS
Ga0209686_119638113300026315SoilMSKITSSMISSLLIGVLLLPGQPALALDKINVTLPSKSFQFIIFPLAKERGYM
Ga0209470_135214613300026324SoilMKKIIPSMISSLLIGVLLLPGQSALALDKINVTLPS
Ga0209058_107693913300026536SoilMKKIIPSMISPLLIGVLLLPGKSAFAIDKINVTLPSKSFQFIIFPLA
Ga0208454_100231383300027573SoilMKKIILSILSPLLIGVLLLPGHSALALDKINVTLPS
Ga0209799_103817423300027654Tropical Forest SoilMKKIIPSMISPLLIGVLLLPSEAAFALDKVSVTLPAKSLQFIIFPLAKERGYMKEEGIDLNIIV
Ga0209382_1068814513300027909Populus RhizosphereMKQIILSMISPLLVGMLLLPAKAVFGLDKINVTLPSKSFQFIIFPLAKERG
Ga0299907_1097515913300030006SoilMKKIILLMISPLLIGMLSLPGQAAFALEKVNVTLPSKSF
Ga0268386_1016521233300030619SoilMKKIILLMISPLLIGMLSLPGQAAFALEKVNVTLPSKSFQFIIFPLAKERGYMQEEGIDL
Ga0307498_1007306613300031170SoilMKKIIPSMIAALLIGVLLLPGKSAFALDKINVTLPSKSFQFI
Ga0307469_1188008923300031720Hardwood Forest SoilMKKIILSMISSLLIGALLLPGKSAFALDKVNVTLPSKS
Ga0307468_10152071113300031740Hardwood Forest SoilMKKIILSMISPLLVGVLLLCGKSAFALDKINVTLPSKSFQFIIFPL
Ga0307406_1099426323300031901RhizosphereMKNIIPSIIAPLLMSVLLLAGKSVYALDKVNVTLPSKS
Ga0307479_1077249613300031962Hardwood Forest SoilMKKIILSMISPLMVGVLLLPGKAAFALDKVSVTLPAKSLQFIIFPVAKERGYMK
Ga0310899_1060463123300032017SoilMKRIILSLIASPLIGVLLFLGKSAFALDKVNVTLPSKSFQFIIFPLAKERGYM
Ga0307471_10209203113300032180Hardwood Forest SoilMISSLLIGALLLADQSALALDKVNVTLPSKSFQFIIFPLAKERGYMK
Ga0307472_10026535923300032205Hardwood Forest SoilMKKITLSMVSPLLISVLLLPGRSAFAVDKVNVTLPSKSFQFIIFPLAKERGYMKVEGIDINI
Ga0364933_087502_1_1233300034150SedimentMKKLILSMISSLLIGILLHPSQSAFALDKINVTLPSKSFQF
Ga0364934_0003114_5561_56923300034178SedimentMKKIILSMISPLLIGVLLLPGKSAFALDKINVTLPSKSFQFIIF

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Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
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