Metagenome Family F077871

Basic Information
Family ID	F077871
Family Type	Metagenome
Number of Sequences	117
Average Sequence Length	47 residues
Representative Sequence	MKFLLQVRFNGADNVIGELPAEEQQKVTAEFEAIRQSPGVLDGNQL
Number of Associated Samples	102
Number of Associated Scaffolds	117

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	100.00 %
% of genes near scaffold ends (potentially truncated)	97.44 %
% of genes from short scaffolds (< 2000 bps)	92.31 %
Associated GOLD sequencing projects	95
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.40

Most Common Taxonomy
Group	Bacteria (90.598 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (23.932 % of family members)
Environment Ontology (ENVO)	Unclassified (29.915 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (37.607 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 27.03% β-sheet: 0.00% Coil/Unstructured: 72.97%
Feature Viewer

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Pfam ID	Name	% Frequency in 117 Family Scaffolds
PF07690	MFS_1	9.40
PF00440	TetR_N	8.55
PF02567	PhzC-PhzF	7.69
PF16925	TetR_C_13	6.84
PF00106	adh_short	2.56
PF03795	YCII	1.71
PF00589	Phage_integrase	1.71
PF00085	Thioredoxin	1.71
PF09278	MerR-DNA-bind	0.85
PF00135	COesterase	0.85
PF03176	MMPL	0.85
PF13460	NAD_binding_10	0.85
PF13613	HTH_Tnp_4	0.85
PF13683	rve_3	0.85
PF02518	HATPase_c	0.85
PF09339	HTH_IclR	0.85
PF13374	TPR_10	0.85
PF00723	Glyco_hydro_15	0.85
PF12833	HTH_18	0.85
PF13411	MerR_1	0.85

COG ID	Name	Functional Category	% Frequency in 117 Family Scaffolds
COG0384	Predicted epimerase YddE/YHI9, PhzF superfamily	General function prediction only [R]	7.69
COG2350	YciI superfamily enzyme, includes 5-CHQ dehydrochlorinase, contains active-site pHis	Secondary metabolites biosynthesis, transport and catabolism [Q]	1.71
COG0789	DNA-binding transcriptional regulator, MerR family	Transcription [K]	0.85
COG1033	Predicted exporter protein, RND superfamily	General function prediction only [R]	0.85
COG2272	Carboxylesterase type B	Lipid transport and metabolism [I]	0.85
COG2409	Predicted lipid transporter YdfJ, MMPL/SSD domain, RND superfamily	General function prediction only [R]	0.85
COG3387	Glucoamylase (glucan-1,4-alpha-glucosidase), GH15 family	Carbohydrate transport and metabolism [G]	0.85

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	90.60 %
Unclassified	root	N/A	9.40 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	90.60 %
Unclassified	root	N/A	9.40 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	90.60 %
Unclassified	root	N/A	9.40 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	88.03 %
Unclassified	root	N/A	9.40 %
Bacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis	0.85 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	81.20 %
Unclassified	root	N/A	9.40 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	2.56 %
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	0.85 %

Name	Rank	Taxonomy	Distribution
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	66.67 %
Unclassified	root	N/A	9.40 %
unclassified Chloroflexi	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi	2.56 %
Thermoleophilia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	0.85 %
Candidatus Rokubacteria	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	0.85 %

Name	Rank	Taxonomy	Distribution
Streptosporangiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	24.79 %
Unclassified	root	N/A	9.40 %
Geodermatophilales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales	5.13 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	2.56 %
Streptomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales	1.71 %
Corynebacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales	1.71 %
unclassified Candidatus Rokubacteria	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria	0.85 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	0.85 %
Frankiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales	0.85 %
Solirubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	0.85 %

Name	Rank	Taxonomy	Distribution
Treboniaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae	24.79 %
Unclassified	root	N/A	9.40 %
Geodermatophilaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae	5.13 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	2.56 %
Streptomycetaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	1.71 %
Mycobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae	1.71 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.85 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	0.85 %
Frankiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae	0.85 %
Patulibacteraceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Patulibacteraceae	0.85 %

Name	Rank	Taxonomy	Distribution
Trebonia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia	24.79 %
Unclassified	root	N/A	9.40 %
unclassified Geodermatophilaceae	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → unclassified Geodermatophilaceae	5.13 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	2.56 %
Mycolicibacterium	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycolicibacterium	1.71 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	1.71 %
Patulibacter	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Patulibacteraceae → Patulibacter	0.85 %
Frankia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia	0.85 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.85 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	0.85 %

Name	Rank	Taxonomy	Distribution
Trebonia kvetii	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	24.79 %
Unclassified	root	N/A	9.40 %
Geodermatophilaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → unclassified Geodermatophilaceae → Geodermatophilaceae bacterium	5.13 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	2.56 %
Mycolicibacterium obuense	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycolicibacterium → Mycolicibacterium obuense	1.71 %
unclassified Frankia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia → unclassified Frankia	0.85 %
Streptomyces scabichelini	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → Streptomyces scabichelini	0.85 %
Streptomyces shenzhenensis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → Streptomyces shenzhenensis	0.85 %
Patulibacter medicamentivorans	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Patulibacteraceae → Patulibacter → Patulibacter medicamentivorans	0.85 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.85 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	0.85 %

Name	Rank	Taxonomy	Distribution
Trebonia kvetii	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	24.79 %
Unclassified	root	N/A	9.40 %
Geodermatophilaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → unclassified Geodermatophilaceae → Geodermatophilaceae bacterium	5.13 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	2.56 %
Mycolicibacterium obuense	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycolicibacterium → Mycolicibacterium obuense	1.71 %
Frankia sp. CiP3	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia → unclassified Frankia → Frankia sp. CiP3	0.85 %
Streptomyces scabichelini	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → Streptomyces scabichelini	0.85 %
Streptomyces shenzhenensis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → Streptomyces shenzhenensis	0.85 %
Patulibacter medicamentivorans	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Patulibacteraceae → Patulibacter → Patulibacter medicamentivorans	0.85 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.85 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	0.85 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2189573001\|GZR05M102I86SF	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	514	Open in IMG/M
2189573002\|GZIGXIF02HJ131	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	518	Open in IMG/M
3300000956\|JGI10216J12902_110242708	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1297	Open in IMG/M
3300001867\|JGI12627J18819_10392289	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	564	Open in IMG/M
3300004081\|Ga0063454_100829518	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	719	Open in IMG/M
3300004091\|Ga0062387_101449797	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	548	Open in IMG/M
3300005172\|Ga0066683_10426613	Not Available	816	Open in IMG/M
3300005332\|Ga0066388_108333243	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	517	Open in IMG/M
3300005338\|Ga0068868_100497675	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1067	Open in IMG/M
3300005364\|Ga0070673_101870258	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	569	Open in IMG/M
3300005406\|Ga0070703_10609033	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Patulibacteraceae → Patulibacter → Patulibacter medicamentivorans	505	Open in IMG/M
3300005435\|Ga0070714_100264852	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1592	Open in IMG/M
3300005435\|Ga0070714_102460482	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	505	Open in IMG/M
3300005437\|Ga0070710_10270450	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1099	Open in IMG/M
3300005437\|Ga0070710_10620898	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	754	Open in IMG/M
3300005451\|Ga0066681_10994408	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	500	Open in IMG/M
3300005468\|Ga0070707_101719081	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	594	Open in IMG/M
3300005530\|Ga0070679_100200604	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1961	Open in IMG/M
3300005548\|Ga0070665_100209843	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1948	Open in IMG/M
3300005563\|Ga0068855_100545039	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → unclassified Geodermatophilaceae → Geodermatophilaceae bacterium	1256	Open in IMG/M
3300005564\|Ga0070664_100963333	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → unclassified Geodermatophilaceae → Geodermatophilaceae bacterium	801	Open in IMG/M
3300005614\|Ga0068856_100400330	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1393	Open in IMG/M
3300005713\|Ga0066905_101274986	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	660	Open in IMG/M
3300006163\|Ga0070715_10134505	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → unclassified Geodermatophilaceae → Geodermatophilaceae bacterium	1194	Open in IMG/M
3300006175\|Ga0070712_101014294	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	719	Open in IMG/M
3300006755\|Ga0079222_12542913	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → unclassified Geodermatophilaceae → Geodermatophilaceae bacterium	514	Open in IMG/M
3300006804\|Ga0079221_10744352	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → unclassified Geodermatophilaceae → Geodermatophilaceae bacterium	691	Open in IMG/M
3300006854\|Ga0075425_100167731	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2520	Open in IMG/M
3300006954\|Ga0079219_10517110	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	842	Open in IMG/M
3300009093\|Ga0105240_12589509	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	524	Open in IMG/M
3300009177\|Ga0105248_11931829	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → unclassified Geodermatophilaceae → Geodermatophilaceae bacterium	670	Open in IMG/M
3300009700\|Ga0116217_10824100	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	571	Open in IMG/M
3300009826\|Ga0123355_11879374	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	561	Open in IMG/M
3300010048\|Ga0126373_10659509	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1102	Open in IMG/M
3300010048\|Ga0126373_12603978	All Organisms → cellular organisms → Bacteria → Terrabacteria group	564	Open in IMG/M
3300010358\|Ga0126370_10518393	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycolicibacterium → Mycolicibacterium obuense	1011	Open in IMG/M
3300010360\|Ga0126372_10103997	All Organisms → cellular organisms → Bacteria	2144	Open in IMG/M
3300010360\|Ga0126372_12260574	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	593	Open in IMG/M
3300010361\|Ga0126378_11045892	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	919	Open in IMG/M
3300010366\|Ga0126379_11209802	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	862	Open in IMG/M
3300010376\|Ga0126381_101392193	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1014	Open in IMG/M
3300010396\|Ga0134126_10376328	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1652	Open in IMG/M
3300010396\|Ga0134126_12745611	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	534	Open in IMG/M
3300012198\|Ga0137364_10541073	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	876	Open in IMG/M
3300012210\|Ga0137378_10395662	All Organisms → cellular organisms → Bacteria	1282	Open in IMG/M
3300012357\|Ga0137384_10371753	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1183	Open in IMG/M
3300012361\|Ga0137360_11831034	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	513	Open in IMG/M
3300012930\|Ga0137407_11965530	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	558	Open in IMG/M
3300012971\|Ga0126369_10552362	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1217	Open in IMG/M
3300012971\|Ga0126369_11442238	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycolicibacterium → Mycolicibacterium obuense	778	Open in IMG/M
3300014968\|Ga0157379_11496553	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	657	Open in IMG/M
3300016294\|Ga0182041_10306427	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1318	Open in IMG/M
3300016319\|Ga0182033_11669772	Not Available	577	Open in IMG/M
3300016357\|Ga0182032_11509831	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	583	Open in IMG/M
3300016422\|Ga0182039_10754978	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	861	Open in IMG/M
3300016445\|Ga0182038_10894596	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	782	Open in IMG/M
3300016445\|Ga0182038_12155373	Not Available	505	Open in IMG/M
3300017924\|Ga0187820_1245863	Not Available	573	Open in IMG/M
3300017937\|Ga0187809_10120275	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	892	Open in IMG/M
3300017946\|Ga0187879_10703481	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	563	Open in IMG/M
3300017948\|Ga0187847_10885169	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	508	Open in IMG/M
3300021404\|Ga0210389_10405754	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1072	Open in IMG/M
3300021407\|Ga0210383_10584522	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	963	Open in IMG/M
3300021479\|Ga0210410_11059246	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	700	Open in IMG/M
3300021560\|Ga0126371_13591815	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	523	Open in IMG/M
3300024279\|Ga0247692_1077413	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	523	Open in IMG/M
3300025898\|Ga0207692_11029809	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	544	Open in IMG/M
3300025915\|Ga0207693_10799722	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	727	Open in IMG/M
3300025915\|Ga0207693_10913116	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	673	Open in IMG/M
3300025924\|Ga0207694_11523844	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	564	Open in IMG/M
3300025926\|Ga0207659_11496775	Not Available	577	Open in IMG/M
3300025929\|Ga0207664_10963737	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	765	Open in IMG/M
3300026035\|Ga0207703_11306236	Not Available	698	Open in IMG/M
3300026088\|Ga0207641_11958025	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	587	Open in IMG/M
3300027775\|Ga0209177_10129565	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	834	Open in IMG/M
3300027787\|Ga0209074_10131088	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	882	Open in IMG/M
3300027882\|Ga0209590_10004514	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	5923	Open in IMG/M
3300028379\|Ga0268266_10157472	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2053	Open in IMG/M
3300028379\|Ga0268266_10222645	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1735	Open in IMG/M
3300028800\|Ga0265338_10060982	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	3308	Open in IMG/M
3300031543\|Ga0318516_10771979	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	544	Open in IMG/M
3300031546\|Ga0318538_10624274	Not Available	585	Open in IMG/M
3300031549\|Ga0318571_10262352	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → Streptomyces shenzhenensis	638	Open in IMG/M
3300031573\|Ga0310915_10586350	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	790	Open in IMG/M
3300031640\|Ga0318555_10212952	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1042	Open in IMG/M
3300031668\|Ga0318542_10249157	All Organisms → cellular organisms → Bacteria → Terrabacteria group	903	Open in IMG/M
3300031682\|Ga0318560_10021816	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2939	Open in IMG/M
3300031719\|Ga0306917_10406885	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1063	Open in IMG/M
3300031719\|Ga0306917_10747601	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	768	Open in IMG/M
3300031719\|Ga0306917_10862617	Not Available	709	Open in IMG/M
3300031747\|Ga0318502_10320710	Not Available	913	Open in IMG/M
3300031770\|Ga0318521_10270600	Not Available	996	Open in IMG/M
3300031778\|Ga0318498_10171630	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	986	Open in IMG/M
3300031779\|Ga0318566_10502217	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	594	Open in IMG/M
3300031782\|Ga0318552_10492643	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	625	Open in IMG/M
3300031819\|Ga0318568_10572376	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	704	Open in IMG/M
3300031831\|Ga0318564_10103861	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1262	Open in IMG/M
3300031896\|Ga0318551_10045178	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2202	Open in IMG/M
3300031912\|Ga0306921_11023070	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	931	Open in IMG/M
3300031945\|Ga0310913_11012610	All Organisms → cellular organisms → Bacteria → Terrabacteria group	582	Open in IMG/M
3300031981\|Ga0318531_10053736	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia → unclassified Frankia → Frankia sp. CiP3	1715	Open in IMG/M
3300032043\|Ga0318556_10647316	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	551	Open in IMG/M
3300032052\|Ga0318506_10028356	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2118	Open in IMG/M
3300032052\|Ga0318506_10159968	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	988	Open in IMG/M
3300032060\|Ga0318505_10198466	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	939	Open in IMG/M
3300032065\|Ga0318513_10304615	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → Streptomyces scabichelini	774	Open in IMG/M
3300032074\|Ga0308173_11865280	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	567	Open in IMG/M
3300032261\|Ga0306920_102184656	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	770	Open in IMG/M
3300032829\|Ga0335070_11294128	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	667	Open in IMG/M
3300032895\|Ga0335074_10643967	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1041	Open in IMG/M
3300032954\|Ga0335083_11134467	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	609	Open in IMG/M
3300032955\|Ga0335076_10069572	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	3467	Open in IMG/M
3300032955\|Ga0335076_10304933	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1481	Open in IMG/M
3300032955\|Ga0335076_10972302	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	731	Open in IMG/M
3300033004\|Ga0335084_11647271	Not Available	632	Open in IMG/M
3300033289\|Ga0310914_11187071	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	665	Open in IMG/M
3300033289\|Ga0310914_11382801	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	607	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	84.62%
Host-Associated	Host-Associated	15.38%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	80.34%
Plants	Host-Associated → Plants	14.53%
Aquatic	Environmental → Aquatic	4.27%
Arthropoda	Host-Associated → Arthropoda	0.85%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	80.34%
Rhizosphere	Host-Associated → Plants → Rhizosphere	10.26%
Freshwater	Environmental → Aquatic → Freshwater	4.27%
Rhizoplane	Host-Associated → Plants → Rhizoplane	4.27%
Digestive System	Host-Associated → Arthropoda → Digestive System	0.85%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	59.83%
Loam	Environmental → Terrestrial → Soil → Loam	14.53%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	5.98%
Soil	Host-Associated → Plants → Rhizosphere → Soil	5.98%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	4.27%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	4.27%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	4.27%
Gut	Host-Associated → Arthropoda → Digestive System → Gut	0.85%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	33.33%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	18.80%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	11.11%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	5.98%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	5.98%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	4.27%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	4.27%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	4.27%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	2.56%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	2.56%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	2.56%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	1.71%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	0.85%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.85%
Unclassified	Host-Associated → Arthropoda → Digestive System → Gut → Unclassified	0.85%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	23.93%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	9.40%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	9.40%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	7.69%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	5.98%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	5.13%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	4.27%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	3.42%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	2.56%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	2.56%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	1.71%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	1.71%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.71%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grass Soil	1.71%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	1.71%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	1.71%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.71%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.71%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	0.85%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	0.85%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	0.85%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.85%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	0.85%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	0.85%
Termite Gut	Host-Associated → Arthropoda → Digestive System → Gut → Unclassified → Termite Gut	0.85%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.85%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.85%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.85%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.85%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere	0.85%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	0.85%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.85%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2189573001	Grass soil microbial communities from Rothamsted Park, UK - FD2 (NaCl 300g/L 5ml)	Environmental	Open in IMG/M
2189573002	Grass soil microbial communities from Rothamsted Park, UK - FE1 (NaCl 30g/L 5ml)	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300001867	Texas A ecozone_OM1H0_M2 (Combined assembly for Texas A ecozone Site metagenome samples, ASSEMBLY_DATE=20130705)	Environmental	Open in IMG/M
3300004081	Grasslands soil microbial communities from Hopland, California, USA - 2 (version 2)	Environmental	Open in IMG/M
3300004091	Coassembly of ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300005172	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005338	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2	Host-Associated	Open in IMG/M
3300005364	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG	Host-Associated	Open in IMG/M
3300005406	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG	Environmental	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005437	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG	Environmental	Open in IMG/M
3300005451	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_130	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005530	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG	Environmental	Open in IMG/M
3300005548	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG	Host-Associated	Open in IMG/M
3300005563	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2	Host-Associated	Open in IMG/M
3300005564	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG	Host-Associated	Open in IMG/M
3300005614	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2	Host-Associated	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300006163	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006804	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200	Environmental	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006954	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control	Environmental	Open in IMG/M
3300009093	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG	Host-Associated	Open in IMG/M
3300009177	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG	Host-Associated	Open in IMG/M
3300009700	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_4_PS metaG	Environmental	Open in IMG/M
3300009826	Embiratermes neotenicus P1 segment gut microbial communities from Petit-Saut dam, French Guiana - Emb289 P1	Host-Associated	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010396	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2	Environmental	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012357	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300014968	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG	Host-Associated	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300017924	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_5	Environmental	Open in IMG/M
3300017937	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_4	Environmental	Open in IMG/M
3300017946	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_10	Environmental	Open in IMG/M
3300017948	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_4_10	Environmental	Open in IMG/M
3300021404	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-O	Environmental	Open in IMG/M
3300021407	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O	Environmental	Open in IMG/M
3300021479	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300024279	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK33	Environmental	Open in IMG/M
3300025898	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025924	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025926	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025929	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300026035	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026088	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300027775	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control (SPAdes)	Environmental	Open in IMG/M
3300027787	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter (SPAdes)	Environmental	Open in IMG/M
3300027882	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300028379	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300028800	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG	Host-Associated	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031546	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f23	Environmental	Open in IMG/M
3300031549	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f24	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031640	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f23	Environmental	Open in IMG/M
3300031668	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f23	Environmental	Open in IMG/M
3300031682	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f22	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031747	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f22	Environmental	Open in IMG/M
3300031770	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f17	Environmental	Open in IMG/M
3300031778	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f24	Environmental	Open in IMG/M
3300031779	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f22	Environmental	Open in IMG/M
3300031782	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f20	Environmental	Open in IMG/M
3300031819	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f21	Environmental	Open in IMG/M
3300031831	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f20	Environmental	Open in IMG/M
3300031896	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f19	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300031981	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f25	Environmental	Open in IMG/M
3300032043	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f24	Environmental	Open in IMG/M
3300032052	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f19	Environmental	Open in IMG/M
3300032060	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f18	Environmental	Open in IMG/M
3300032065	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f20	Environmental	Open in IMG/M
3300032074	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.P.R1	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300032829	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.3	Environmental	Open in IMG/M
3300032895	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.3	Environmental	Open in IMG/M
3300032954	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.2	Environmental	Open in IMG/M
3300032955	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.5	Environmental	Open in IMG/M
3300033004	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.4	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M

Geographical Distribution

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Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.40
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.40
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F077871

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
FD2_04206270	2189573001	Grass Soil	MKYMLQVRFNGADTVIGRLPTEEQQNVRAEFEAIRQSSGVLDGQPAPSR
FE1_01168910	2189573002	Grass Soil	MKYLLQVRFNGADAVIGKLPAGEQEKITAEFIAIRRSP
JGI10216J12902_1102427083	3300000956	Soil	MKYMLQVRFNGADLTINELPAEQRQAIFAEFEAIGRLPG
JGI12627J18819_103922891	3300001867	Forest Soil	MKFLLQVRFNGADKVIGTLPAEEQKQVTGEFEAIRRSPGVLDGNQLQAAGT
Ga0063454_1008295182	3300004081	Soil	MKYLLQIRFNGADAAIGRLPAAERQRIVAEFEAILDTPGVLDGNQLQPAGTA
Ga0062387_1014497971	3300004091	Bog Forest Soil	MKFLLQVRFNGAGAVISELPAEEQQKLTAEFEAIRRSPGVLDGNQLQAAGTA
Ga0066683_104266131	3300005172	Soil	MKYMLQVRFNGADTVIGRLSAEEQQNVRAEFEAIRQSAGVLDSNQL
Ga0066388_1083332432	3300005332	Tropical Forest Soil	MKYMLQVRFNGADALIGRLPAEEQHKVTAEFQAIRQFPGVLDGNQLAAAG
Ga0068868_1004976751	3300005338	Miscanthus Rhizosphere	MLQVRFNGADEMIHMLPADEQEKVTAEFIAIRESSDVLDGNQL
Ga0070673_1018702582	3300005364	Switchgrass Rhizosphere	MKFLLQVRFNGADKVIGTLPAEEQKQVTGEFEAIRRSPGVLDGNQLQA
Ga0070703_106090331	3300005406	Corn, Switchgrass And Miscanthus Rhizosphere	MKFLLQVRFNGADKVIGTLPAEEQKQVTGEFEAIRRSPGVLDGNQLQAAGAAVTVRVSDGQA
Ga0070714_1002648521	3300005435	Agricultural Soil	MKYMLQVRFNGADAVIGGLPPDEQEKVTAEFEAIRRSPGVLDGNQLQAAN
Ga0070714_1024604821	3300005435	Agricultural Soil	MKFLLQVRFNGADKVIGTLPAEKQKQVTGEFEAIRRSPGVLDGNQLQAAGTAATV
Ga0070710_102704502	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	MKYMLQVRFNGADAEIAKLPAAEQEKVTAEFEAVRRSPGVLDG
Ga0070710_106208981	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	MKFLLQVRFNGADNVIGELPAEEQQKVTAEFEAIRQSPGVLDGNQL
Ga0066681_109944081	3300005451	Soil	MKFLLQVRFNGADKVIGTLAEEQKQVTGEFEAIRRSPGVLDGNQLQAAGTAATVR
Ga0070707_1017190811	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	MKFLLQIRFNGADTMIGELPAGEQHKVTAEFEAIRQSPGV
Ga0070679_1002006041	3300005530	Corn Rhizosphere	VKYMLQVRFNGADAVIRRLPADEQERLTAEFIAIRKSSGVLDGNQLEAPSSAST
Ga0070665_1002098434	3300005548	Switchgrass Rhizosphere	MKYLLQVRFNGADAVIGTLPAGEQEKITAEFIAIR
Ga0068855_1005450392	3300005563	Corn Rhizosphere	MKYLLQVRFNGADAVIGTLPAGEQEKITAEFIAIRRSPGVLDGNQLQAA
Ga0070664_1009633332	3300005564	Corn Rhizosphere	MKYLLQVRFNGADAVIGTLPAGEQEKITAEFITIRRAPGVLDGNQ
Ga0068856_1004003303	3300005614	Corn Rhizosphere	VKYMLQVRFNGADAIIGRLPADEQERLTAEFIAIRKSSGVLDGNQLEAPSSASTV
Ga0066905_1012749861	3300005713	Tropical Forest Soil	MRYMIQVRFNGADAAIHLLPADEQAKITAEFQAIR
Ga0070715_101345052	3300006163	Corn, Switchgrass And Miscanthus Rhizosphere	MKYLLQVRFNGADAVIGTLPAGEQEKITAEFIAIRRSPGVLDGNQLQA
Ga0070712_1010142941	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	VKFMLQVRFNGADKAIGELSAGDQEKVTAEFEEIRRSPGVLDGNQLQAA
Ga0079222_125429132	3300006755	Agricultural Soil	MKYLLQIRFNGADAVIRTLPAGEQEKITAEFIAIRTSPGVL
Ga0079221_107443522	3300006804	Agricultural Soil	MKYLLQIRFNGADAVIRTLPPREQEKITAEFIAIRTSPGVLDGN
Ga0075425_1001677313	3300006854	Populus Rhizosphere	MKYLLQIRFNGADAVIRTLPAGEQEKITAEFIAIRTSPGVLDGNQLQAAS
Ga0079219_105171102	3300006954	Agricultural Soil	MKYMLQVRFNGADALIGRLAAEEQQKVTAEFQAIRQFPGVLDGNQLAAAGTAA
Ga0105240_125895093	3300009093	Corn Rhizosphere	MRFLLQIRFNGADTMIGELPAEEQHKVTAEFEAIRQSPGVLDGNQLQAAS
Ga0105248_119318292	3300009177	Switchgrass Rhizosphere	MKYLLQIRFNGADAVIRTLPAGEQEKITAEFIAIR
Ga0116217_108241002	3300009700	Peatlands Soil	MKFLLQVRFNGADKVIGALPAEDQEKVTAEFEAIRRSPGVLDGNQLQAASEAATVRV
Ga0123355_118793741	3300009826	Termite Gut	MLQVRFNGADALIGGLPAAEREKVTAEFEAIRRTAGVLDGNQ
Ga0126373_106595092	3300010048	Tropical Forest Soil	MKYMLQVRFNGADAVIHSLPAGEQEKITAEFVAVRKSSGVLDGNQLDAAGSAKTV
Ga0126373_126039781	3300010048	Tropical Forest Soil	MKYMLQVRFNGADVIGRLPVQEREQVTTEFEEIGRSPGVLDGNQLQA
Ga0126370_105183932	3300010358	Tropical Forest Soil	MLQVRFDGANAVIHKLPADEQEKVTAEFIAIRKSSGVLDGNQLQAA
Ga0126372_101039971	3300010360	Tropical Forest Soil	MKYLLQVRFNGADAVIGKLPAGEQEKITAEFIEIRRSPGVLDGNQ
Ga0126372_122605742	3300010360	Tropical Forest Soil	MKYMLQVRFNGADALIGRLPAEEQHKVTAEFQAIRQFPGVLDGNQLA
Ga0126378_110458921	3300010361	Tropical Forest Soil	MKYMLQVRFNGADAVIHKLPADEQEKVTAEFIAIRKS
Ga0126379_112098021	3300010366	Tropical Forest Soil	MKYMLQVRFNGADALIGRLPAEEQQKVTAEFQAIRAFPGVLDGNQLAAAGTAAT
Ga0126381_1013921931	3300010376	Tropical Forest Soil	MKYMLQVRFNGAGALIGRLPAEEQHKVTAEFQAIRQFPGVLDGNQLAAA
Ga0134126_103763281	3300010396	Terrestrial Soil	MLQVRFNGADKAIGELPAGDQEKVTAEFKEVRRSAGVLDGNQL
Ga0134126_127456111	3300010396	Terrestrial Soil	MQGDRVKYMLQVRFNGADAVIGGLPAAEQEKVTAEFEAIRRSAGVLDGNQLQAAA
Ga0137364_105410731	3300012198	Vadose Zone Soil	MKFLLQVRFNGADTMISELPAEEQHKVTAEFEAIRQSP
Ga0137378_103956621	3300012210	Vadose Zone Soil	MKFMLQVRFNGADKAIGELSAGDQEKVTAEFEEIRRSSGVLDGNQLQAASTA
Ga0137384_103717533	3300012357	Vadose Zone Soil	MKFLLQVRFNGAGNVIGDLPAEEQQKVTAEFEAIRQSSGVLDGNQLQAAGTAVTVRVEG
Ga0137360_118310341	3300012361	Vadose Zone Soil	MKFLLQVRFNGAGNVIGELPSEEQQKVTAEFEAIRQSSGVLDGNQ
Ga0137407_119655302	3300012930	Vadose Zone Soil	MKFLLQVRFNGADNVIGELPAEEQQKVTAEFEEIRQSSGVL
Ga0126369_105523621	3300012971	Tropical Forest Soil	MKYMLQVRFNGADTVMGRLSAEEQQNVRAEFEAVRQSSGVLDGNQLQATTQVELVEIG*
Ga0126369_114422382	3300012971	Tropical Forest Soil	MLQIRFNGADAVIHKLPADEQEKVTAEFIAIRKSSGVLDG
Ga0157379_114965532	3300014968	Switchgrass Rhizosphere	MKFMLQVRFNGADKAIGELSAGDQQKVTAEFEEIRRSPGVLDGNQLQAAGTAATVRVDGRQP
Ga0182041_103064271	3300016294	Soil	MKFLLQVRFNGAGHVIGELPAGEQQKVTAEFEAIRQSPGVLDGNQLQAAGTAATVR
Ga0182033_116697721	3300016319	Soil	VKYMLQVRFNGADAVIAKLPAGEQEKVTAEFIAIRK
Ga0182032_115098311	3300016357	Soil	MKFLLQVRFNGAGHVIGELPAGEQQKVTAEFEAIRQSPGVLDGNQLQAASGAATVRVH
Ga0182039_107549782	3300016422	Soil	MKFMLQVRFNGAETVISELPAEEQQKVTAEFEAIRWSPGVLDGNQLQAAGTAATVRLD
Ga0182038_108945961	3300016445	Soil	MTYLLQVRFNGADEVIHKLSADEQEKITAEFVAIRKSSGVLDGNQLEAAST
Ga0182038_121553731	3300016445	Soil	MKYMLQVRFNGADTVIGRLSAEEQQNVRAEFEAIRQS
Ga0187820_12458631	3300017924	Freshwater Sediment	VKYMLQVRFNGADAAIGRLPADEQEKITAEFEAIRRYPG
Ga0187809_101202752	3300017937	Freshwater Sediment	VKYMLQVRFNGADEVIRKLPADEQEKVTADFIAIRESSGVLDGNQL
Ga0187879_107034811	3300017946	Peatland	MEFLLQVRFNGADNVIGELPAEEQQKVTAEFEAIRRSPGVLDGYQLQAASTA
Ga0187847_108851692	3300017948	Peatland	MEFLLQVRFNGADNVIGELPAEEQQKVTAEFEAIR
Ga0210389_104057541	3300021404	Soil	MKFLLQVRFNGADKVIGTLPAEEQKRVTGEFEAIRRSPGVLDGNQLQAAGTAA
Ga0210383_105845222	3300021407	Soil	MKFLLQVRFNGADKVIGALPAEEQKKVTGEFEAIRETSGVLDGNQLQAASE
Ga0210410_110592461	3300021479	Soil	MKFLLQVRFNGADKVIGTLPAEEQKQVTGEFEAIRRSPGVLDGNQLQAAGTAATVRVD
Ga0126371_135918151	3300021560	Tropical Forest Soil	VKFMLQVRFNGADKAIGELSAGDQEKVTAEFEEIRRSSGVLDGNQLQAASTAAT
Ga0247692_10774132	3300024279	Soil	MKFLLQVRFNGADKVIGTLPAEEQKQVTGEFEAIRRSPGVLDGNQLQ
Ga0207692_110298091	3300025898	Corn, Switchgrass And Miscanthus Rhizosphere	VKFMLQIRFNGADKAIGGLPAAEQEKVTAEFEAIRRSPGVLDGNQLQAVGTASTVRV
Ga0207693_107997223	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	MKFLLQVRFDGADKVIGTLPAEEQKRVTGEFEAIRRSPGVLDGNQLQAAG
Ga0207693_109131161	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	VKFMLQVRFNGADKAIGELSAGDQEKVTAEFEEIRRSPGVLDGNQLQAASTAATV
Ga0207694_115238441	3300025924	Corn Rhizosphere	MKYMLQVRFNGADTVIGRLSAGEQQNVRAEFEAIRQSPGVLDGNKLQAASTAAT
Ga0207659_114967751	3300025926	Miscanthus Rhizosphere	VKYMLQVRFNGADEMIHMLPADEQEKVTAEFIAIRESSDVLDGNQLQAA
Ga0207664_109637371	3300025929	Agricultural Soil	MKFLLQVRFNGAGTVIGALPAEEQKKVTGEFEAIRRSPGVLDG
Ga0207703_113062362	3300026035	Switchgrass Rhizosphere	MKFMLQVRFNGADKAIGELSAGDQQKVTAEFEEIRRSPGVLDGNQLQAAGTAATVR
Ga0207641_119580251	3300026088	Switchgrass Rhizosphere	MKFLLQVRFNGADKVIGTLPAEEQKQVTGEFEAIRRSPGVLD
Ga0209177_101295653	3300027775	Agricultural Soil	MKFLLQVRFNGADKVIGTLPAEEQKQVTGEFEAIRRSPGVLDGNQLQAAG
Ga0209074_101310881	3300027787	Agricultural Soil	VKYLLQVRFNGAEAVIHELPADEQEKVTAEFIAIRKSPGVLDGNQLEAPG
Ga0209590_100045148	3300027882	Vadose Zone Soil	MKYMLQVRFNGADAAIGRLPADEQQKVTAEFEAIRRSPGVLDGNQL
Ga0268266_101574721	3300028379	Switchgrass Rhizosphere	MKYLLQVRFNGADAVIGTLPAGEQEKITAEFIAIRRSPGVLDGNQLQAAGAAVTVRVS
Ga0268266_102226453	3300028379	Switchgrass Rhizosphere	VKYMLQVRFNGADAIIDRLPADEQERLTAEFIAIRKSSGVLDGN
Ga0265338_100609824	3300028800	Rhizosphere	MKFLLQVRFNGADKVIGALPAADQQKVTDEFIAVRQSPGVLDGNQLQAASE
Ga0318516_107719792	3300031543	Soil	MKYMLQVRFNGADALIGRLPAEEQHKVTAEFQAIRQFPGVLDG
Ga0318538_106242742	3300031546	Soil	MKFLLQVRFNGAGHVIGELPAGEQQKVTAEFEAIR
Ga0318571_102623522	3300031549	Soil	MKYMLQVRFNGADTVIGRLSAEEQQNVRAEFEAIRQSS
Ga0310915_105863501	3300031573	Soil	MKFMLQVRFNGAETVISELPAEEQQKVTAEFEAIRWSPGVLDGNQLQAA
Ga0318555_102129521	3300031640	Soil	MKFLLQVRFNGAGHVIGELPAGEQQKVTAEFEAIRQSPGVLDGNQ
Ga0318542_102491572	3300031668	Soil	MKYMLQVRFNGADTLIGTLPAEEQQKVTAEFQVIRQFPG
Ga0318560_100218165	3300031682	Soil	VKYMLQVRFDGADAVIGKLPAGEQEKVTAEFIAIRKSSGVLDGSQLQAASGAA
Ga0306917_104068852	3300031719	Soil	MKYMLQVRFNGADALIGTLPAEEQQKVTAEFQVIRQFPGVLDGNQLAAAGTA
Ga0306917_107476012	3300031719	Soil	MKYMLQVRFNGAGALIGRLPAAEQQKVTAEFQAIRHSPGVLDGNQL
Ga0306917_108626171	3300031719	Soil	VKYMLQVRFNGVDEVIHKLPADDQEKVTAEFIAIRESSGVLDGNQ
Ga0318502_103207102	3300031747	Soil	VKYMLQVRFDGADAVIGKLPAGEQEKVTAEFIAIRKSSGVLD
Ga0318521_102706001	3300031770	Soil	VKYMLQVRFDGADAVIGKLPAGEQEKVTAEFIAIRKSSGVLDGSQLQAASGAATVRVHGG
Ga0318498_101716301	3300031778	Soil	MTYLLQVRFNGADEVIHKLPADEQEKVTAEFVAIRKSSGVLDGNQLEAASA
Ga0318566_105022171	3300031779	Soil	MKYMLQVRFNGADALIGTLPAEEQQKVTAEFQVIRQFPGVLDGNQLAAAGTAATVRV
Ga0318552_104926431	3300031782	Soil	MKFMLQVRFNGAETVISELPAEEQQKVTAEFEAIRW
Ga0318568_105723762	3300031819	Soil	MKYMLQVRFNGADIVIGRLSAREQQDVRAEFEAIRQSSGVLDGSQLQAASTA
Ga0318564_101038611	3300031831	Soil	MKFMLQVRFNGAETVISELPAEEQQKVTAEFEAIRWSPGVLDGN
Ga0318551_100451781	3300031896	Soil	MKFLLQVRFNGAGHVIGELPAGEQQKVTAEFEAIRQ
Ga0306921_110230702	3300031912	Soil	MKYMLQVRFNGAGALIGRLPAAEQQTVTAEFQAIRHSPGVLDGNQ
Ga0310913_110126101	3300031945	Soil	VKYMLQVRFNGVDEVIHKLPADEQEKVTAEFIAIRKSSGVLDGSQLQAA
Ga0318531_100537363	3300031981	Soil	VKYMLQVRFDGADAVIGKLPAGEQEKVTAEFIAIRK
Ga0318556_106473162	3300032043	Soil	MKYMLQVRFNGADALIGTLPADEQQKLTAEFQAIRQFPGVLDGNQLAAADTAATV
Ga0318506_100283561	3300032052	Soil	VKYMLQVRFDGADAVIGKLPAGEQEKVTAEFIAIRKSSGVLDGSQLQAASGAATVRE
Ga0318506_101599682	3300032052	Soil	MKFLLQVRFNGAGHVIGELPAGEQQKVTAEFEAIRQSPGVLDGN
Ga0318505_101984661	3300032060	Soil	VKYMLQVRFNGADAAIGRLPADEQEKITAEFEAIRRSPGVLDGNQLQAAS
Ga0318513_103046151	3300032065	Soil	MKFLLQVRFNGAGHVIGELPVGEQQKVTAEFEAIRQSPGVLDGNQLQAA
Ga0308173_118652802	3300032074	Soil	VKFLLQVRFNGADTVIGELPAEERQKVTGEFIAIRSSVGVLGGN
Ga0306920_1021846561	3300032261	Soil	MKFLLQVRFNGAGHVIGELPAGEQQKVTAEFEAIRQSPGVLDANQLQAAGTAATVCM
Ga0335070_112941281	3300032829	Soil	MKYMLQVRFNGADIVIGRLSAREQQHVRAEFEAIRQSSGVLDGSQLQVA
Ga0335074_106439671	3300032895	Soil	MKYMLQVRFNGADAAIGRLPADEQAKITGEFEAIRRSPGVLDGN
Ga0335083_111344671	3300032954	Soil	MKFLLQVRFNGAGAVIGALPAGEQQKVTAEFEAIRQSPGVLDDNQLQAA
Ga0335076_100695721	3300032955	Soil	MKYMLQVRFNGADTVIGRLSAEEQQNVRAEFEAIRQ
Ga0335076_103049331	3300032955	Soil	VKYMLQVRFNGADEVIRKLPAGEREKVTAEFIAIRESS
Ga0335076_109723021	3300032955	Soil	VKYMLQVRFNGADAVIGGLPADEQEKITAEFEAIRQSP
Ga0335084_116472711	3300033004	Soil	MKYVLQVRFNGADTVIGSLSAKEQQNVHAEFEAIRQSP
Ga0310914_111870712	3300033289	Soil	MKFMLQVRFNGADTVISELPAEEQQKVTAEFEAIR
Ga0310914_113828012	3300033289	Soil	MKYMLQVRFNGADIVIGRLSAREQQDVRAEFEAIRQSSGVL

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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