Metagenome Family F077774

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F077774
Family Type	Metagenome
Number of Sequences	117
Average Sequence Length	48 residues
Representative Sequence	VSKRSEVVYINGAPSTPGYLLALLRELSHVPRGLTEIAEAKQVRKT
Number of Associated Samples	19
Number of Associated Scaffolds	113

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	76.99 %
% of genes near scaffold ends (potentially truncated)	95.73 %
% of genes from short scaffolds (< 2000 bps)	85.47 %
Associated GOLD sequencing projects	10
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.38

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Unclassified (98.291 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Freshwater → Ice → Glacial Lake → Freshwater (78.633 % of family members)
Environment Ontology (ENVO)	Unclassified (78.632 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Water (non-saline) (78.632 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 32.43% β-sheet: 5.41% Coil/Unstructured: 62.16%
Feature Viewer

Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.38
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.38
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 113 Family Scaffolds
PF02493	MORN	0.88

COG ID	Name	Functional Category	% Frequency in 113 Family Scaffolds
COG2849	Antitoxin component YwqK of the YwqJK toxin-antitoxin module	Defense mechanisms [V]	0.88
COG4642	Uncharacterized conserved protein	Function unknown [S]	0.88

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	98.29 %
All Organisms	root	All Organisms	1.71 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	98.29 %
cellular organisms	root	All Organisms → cellular organisms	1.71 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	98.29 %
Eukaryota	superkingdom	All Organisms → cellular organisms → Eukaryota	0.85 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	98.29 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	0.85 %
Cryptophyceae	class	All Organisms → cellular organisms → Eukaryota → Cryptophyceae	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	98.29 %
Pyrenomonadales	order	All Organisms → cellular organisms → Eukaryota → Cryptophyceae → Pyrenomonadales	0.85 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	98.29 %
Geminigeraceae	family	All Organisms → cellular organisms → Eukaryota → Cryptophyceae → Pyrenomonadales → Geminigeraceae	0.85 %
Verrucomicrobiae	class	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	98.29 %
Guillardia	genus	All Organisms → cellular organisms → Eukaryota → Cryptophyceae → Pyrenomonadales → Geminigeraceae → Guillardia	0.85 %
Verrucomicrobiales	order	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	98.29 %
Verrucomicrobiaceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobiaceae	0.85 %
Guillardia theta	species	All Organisms → cellular organisms → Eukaryota → Cryptophyceae → Pyrenomonadales → Geminigeraceae → Guillardia → Guillardia theta	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	98.29 %
unclassified Verrucomicrobiaceae	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobiaceae → unclassified Verrucomicrobiaceae	0.85 %
Guillardia theta	species	All Organisms → cellular organisms → Eukaryota → Cryptophyceae → Pyrenomonadales → Geminigeraceae → Guillardia → Guillardia theta	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	98.29 %
Verrucomicrobiaceae bacterium TMED86	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobiaceae → unclassified Verrucomicrobiaceae → Verrucomicrobiaceae bacterium TMED86	0.85 %
Guillardia theta	species	All Organisms → cellular organisms → Eukaryota → Cryptophyceae → Pyrenomonadales → Geminigeraceae → Guillardia → Guillardia theta	0.85 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300006165\|Ga0075443_10389104	Not Available	521	Open in IMG/M
3300006165\|Ga0075443_10389104	Not Available	521	Open in IMG/M
3300007516\|Ga0105050_10550727	Not Available	676	Open in IMG/M
3300007516\|Ga0105050_10872594	Not Available	510	Open in IMG/M
3300007519\|Ga0105055_10026537	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobiaceae → unclassified Verrucomicrobiaceae → Verrucomicrobiaceae bacterium TMED86	6471	Open in IMG/M
3300007519\|Ga0105055_10207149	Not Available	1920	Open in IMG/M
3300007519\|Ga0105055_10281165	Not Available	1556	Open in IMG/M
3300007519\|Ga0105055_10343451	Not Available	1347	Open in IMG/M
3300007519\|Ga0105055_10369080	Not Available	1278	Open in IMG/M
3300007519\|Ga0105055_10668203	Not Available	817	Open in IMG/M
3300007519\|Ga0105055_10733903	Not Available	761	Open in IMG/M
3300007519\|Ga0105055_10900210	Not Available	654	Open in IMG/M
3300007519\|Ga0105055_11062908	Not Available	579	Open in IMG/M
3300007519\|Ga0105055_11163251	Not Available	543	Open in IMG/M
3300007519\|Ga0105055_11170619	Not Available	541	Open in IMG/M
3300007520\|Ga0105054_10061301	Not Available	3960	Open in IMG/M
3300007520\|Ga0105054_10164715	Not Available	2186	Open in IMG/M
3300007520\|Ga0105054_10367934	Not Available	1249	Open in IMG/M
3300007520\|Ga0105054_10461594	Not Available	1051	Open in IMG/M
3300007520\|Ga0105054_10630613	Not Available	825	Open in IMG/M
3300007520\|Ga0105054_10839307	Not Available	662	Open in IMG/M
3300007520\|Ga0105054_10999096	Not Available	582	Open in IMG/M
3300007520\|Ga0105054_11197175	Not Available	511	Open in IMG/M
3300007522\|Ga0105053_10049681	Not Available	4429	Open in IMG/M
3300007522\|Ga0105053_10497496	Not Available	996	Open in IMG/M
3300007522\|Ga0105053_10593903	Not Available	868	Open in IMG/M
3300007522\|Ga0105053_10609603	Not Available	851	Open in IMG/M
3300007522\|Ga0105053_10622081	Not Available	838	Open in IMG/M
3300007522\|Ga0105053_10741808	Not Available	732	Open in IMG/M
3300007522\|Ga0105053_10948362	Not Available	608	Open in IMG/M
3300007522\|Ga0105053_10987658	Not Available	590	Open in IMG/M
3300007522\|Ga0105053_10996634	Not Available	586	Open in IMG/M
3300007522\|Ga0105053_11225913	Not Available	505	Open in IMG/M
3300007522\|Ga0105053_11225913	Not Available	505	Open in IMG/M
3300007522\|Ga0105053_11235361	Not Available	502	Open in IMG/M
3300007522\|Ga0105053_11237185	Not Available	501	Open in IMG/M
3300007522\|Ga0105053_11237185	Not Available	501	Open in IMG/M
3300007523\|Ga0105052_10366974	Not Available	947	Open in IMG/M
3300007523\|Ga0105052_10986916	Not Available	524	Open in IMG/M
3300007523\|Ga0105052_11067349	Not Available	500	Open in IMG/M
3300007722\|Ga0105051_10213465	Not Available	1475	Open in IMG/M
3300007722\|Ga0105051_10287972	Not Available	1241	Open in IMG/M
3300007722\|Ga0105051_10589884	Not Available	817	Open in IMG/M
3300007722\|Ga0105051_10803779	Not Available	681	Open in IMG/M
3300007722\|Ga0105051_11043006	Not Available	584	Open in IMG/M
3300007722\|Ga0105051_11233959	Not Available	530	Open in IMG/M
3300011188\|Ga0136587_1057988	Not Available	949	Open in IMG/M
3300011188\|Ga0136587_1144368	Not Available	611	Open in IMG/M
3300011188\|Ga0136587_1173124	Not Available	560	Open in IMG/M
3300012037\|Ga0136559_1009863	Not Available	2523	Open in IMG/M
3300012037\|Ga0136559_1092186	Not Available	807	Open in IMG/M
3300012037\|Ga0136559_1111193	Not Available	737	Open in IMG/M
3300012037\|Ga0136559_1139258	Not Available	662	Open in IMG/M
3300012037\|Ga0136559_1167013	Not Available	607	Open in IMG/M
3300012037\|Ga0136559_1171464	Not Available	599	Open in IMG/M
3300012037\|Ga0136559_1237510	Not Available	514	Open in IMG/M
3300012037\|Ga0136559_1249177	Not Available	502	Open in IMG/M
3300012272\|Ga0136586_1084083	Not Available	745	Open in IMG/M
3300012272\|Ga0136586_1113288	Not Available	650	Open in IMG/M
3300012272\|Ga0136586_1125716	Not Available	620	Open in IMG/M
3300012272\|Ga0136586_1185198	Not Available	521	Open in IMG/M
3300027832\|Ga0209491_10096329	Not Available	2818	Open in IMG/M
3300027832\|Ga0209491_10096828	Not Available	2809	Open in IMG/M
3300027832\|Ga0209491_10106896	All Organisms → cellular organisms → Eukaryota → Cryptophyceae → Pyrenomonadales → Geminigeraceae → Guillardia → Guillardia theta	2637	Open in IMG/M
3300027832\|Ga0209491_10141945	Not Available	2185	Open in IMG/M
3300027832\|Ga0209491_10159768	Not Available	2013	Open in IMG/M
3300027832\|Ga0209491_10194780	Not Available	1748	Open in IMG/M
3300027832\|Ga0209491_10269715	Not Available	1359	Open in IMG/M
3300027832\|Ga0209491_10453516	Not Available	873	Open in IMG/M
3300027832\|Ga0209491_10486651	Not Available	817	Open in IMG/M
3300027848\|Ga0209390_10036164	Not Available	5005	Open in IMG/M
3300027848\|Ga0209390_10138982	Not Available	2220	Open in IMG/M
3300027848\|Ga0209390_10217942	Not Available	1619	Open in IMG/M
3300027848\|Ga0209390_10305808	Not Available	1241	Open in IMG/M
3300027848\|Ga0209390_10344259	Not Available	1125	Open in IMG/M
3300027848\|Ga0209390_10383209	Not Available	1027	Open in IMG/M
3300027848\|Ga0209390_10510807	Not Available	794	Open in IMG/M
3300027848\|Ga0209390_10557692	Not Available	731	Open in IMG/M
3300027848\|Ga0209390_10754311	Not Available	548	Open in IMG/M
3300027848\|Ga0209390_10754311	Not Available	548	Open in IMG/M
3300027976\|Ga0209702_10274924	Not Available	691	Open in IMG/M
3300027983\|Ga0209284_10098746	Not Available	1554	Open in IMG/M
3300027983\|Ga0209284_10161429	Not Available	1172	Open in IMG/M
3300027983\|Ga0209284_10420671	Not Available	655	Open in IMG/M
3300027983\|Ga0209284_10484420	Not Available	596	Open in IMG/M
3300027983\|Ga0209284_10595599	Not Available	517	Open in IMG/M
3300028369\|Ga0306896_1045409	Not Available	676	Open in IMG/M
3300028369\|Ga0306896_1072248	Not Available	539	Open in IMG/M
3300028369\|Ga0306896_1076781	Not Available	524	Open in IMG/M
3300028373\|Ga0306897_1067622	Not Available	615	Open in IMG/M
3300028373\|Ga0306897_1087914	Not Available	538	Open in IMG/M
3300028373\|Ga0306897_1098377	Not Available	509	Open in IMG/M
3300028413\|Ga0306870_1042021	Not Available	820	Open in IMG/M
3300028413\|Ga0306870_1042529	Not Available	815	Open in IMG/M
3300032435\|Ga0335398_10180383	Not Available	1961	Open in IMG/M
3300032435\|Ga0335398_10342694	Not Available	1222	Open in IMG/M
3300032435\|Ga0335398_10357462	Not Available	1182	Open in IMG/M
3300032435\|Ga0335398_10383281	Not Available	1117	Open in IMG/M
3300032435\|Ga0335398_10455497	Not Available	967	Open in IMG/M
3300032435\|Ga0335398_10538593	Not Available	832	Open in IMG/M
3300032435\|Ga0335398_10610699	Not Available	740	Open in IMG/M
3300032435\|Ga0335398_10775260	Not Available	594	Open in IMG/M
3300032435\|Ga0335398_10871914	Not Available	533	Open in IMG/M
3300032435\|Ga0335398_10878228	Not Available	530	Open in IMG/M
3300032462\|Ga0335396_10091103	Not Available	2011	Open in IMG/M
3300032462\|Ga0335396_10170362	Not Available	1434	Open in IMG/M
3300032462\|Ga0335396_10251196	Not Available	1158	Open in IMG/M
3300032462\|Ga0335396_10476079	Not Available	795	Open in IMG/M
3300032462\|Ga0335396_10608833	Not Available	680	Open in IMG/M
3300032462\|Ga0335396_10852351	Not Available	543	Open in IMG/M
3300032462\|Ga0335396_10908813	Not Available	520	Open in IMG/M
3300032462\|Ga0335396_10927001	Not Available	513	Open in IMG/M
3300032462\|Ga0335396_10958093	Not Available	502	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	100.00%

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater	78.63%
Non-Marine Saline And Alkaline	Environmental → Aquatic → Non-Marine Saline And Alkaline	19.66%
Marine	Environmental → Aquatic → Marine	1.71%

Habitat	Taxonomy	Distribution
Ice	Environmental → Aquatic → Freshwater → Ice	78.63%
Saline	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline	19.66%
Unclassified	Environmental → Aquatic → Marine → Unclassified	1.71%

Habitat	Taxonomy	Distribution
Glacial Lake	Environmental → Aquatic → Freshwater → Ice → Glacial Lake	78.63%
Unclassified	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified	19.66%
Unclassified	Environmental → Aquatic → Marine → Unclassified → Unclassified	1.71%

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater → Ice → Glacial Lake → Freshwater	78.63%
Saline Lake	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified → Saline Lake	19.66%
Marine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine	1.71%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300006165	Marine microbial communities from the West Antarctic Peninsula - Coastal water metaG006-DNA	Environmental	Open in IMG/M
3300007516	Freshwater microbial communities from Lake Fryxell liftoff mats and glacier meltwater in Antarctica - FRY-01	Environmental	Open in IMG/M
3300007519	Freshwater microbial communities from Lake Bonney liftoff mats and glacier meltwater in Antarctica - BON-03	Environmental	Open in IMG/M
3300007520	Freshwater microbial communities from Lake Bonney liftoff mats and glacier meltwater in Antarctica - BON-02 (megahit assembly)	Environmental	Open in IMG/M
3300007522	Freshwater microbial communities from Lake Bonney liftoff mats and glacier meltwater in Antarctica - BON-01	Environmental	Open in IMG/M
3300007523	Freshwater microbial communities from Lake Fryxell liftoff mats and glacier meltwater in Antarctica - FRY-03	Environmental	Open in IMG/M
3300007722	Freshwater microbial communities from Lake Fryxell liftoff mats and glacier meltwater in Antarctica - FRY-02 (megahit assembly)	Environmental	Open in IMG/M
3300011188	Saline lake microbial communities from Rauer Islands, Antarctica - Metagenome Filla 1 #563	Environmental	Open in IMG/M
3300012037	Saline lake microbial communities from Rauer Islands, Antarctica - Metagenome Hop E1 #496	Environmental	Open in IMG/M
3300012272	Saline lake microbial communities from Rauer Islands, Antarctica - Metagenome Filla 1 #562	Environmental	Open in IMG/M
3300027832	Freshwater microbial communities from Lake Bonney liftoff mats and glacier meltwater in Antarctica - BON-02 (SPAdes)	Environmental	Open in IMG/M
3300027848	Freshwater microbial communities from Lake Bonney liftoff mats and glacier meltwater in Antarctica - BON-01 (SPAdes)	Environmental	Open in IMG/M
3300027976	Freshwater microbial communities from Lake Fryxell liftoff mats and glacier meltwater in Antarctica - FRY-01 (SPAdes)	Environmental	Open in IMG/M
3300027983	Freshwater microbial communities from Lake Fryxell liftoff mats and glacier meltwater in Antarctica - FRY-03 (SPAdes)	Environmental	Open in IMG/M
3300028369	Saline lake microbial communities from Rauer Islands, Antarctica - Metagenome Filla 1 #562 (v2)	Environmental	Open in IMG/M
3300028373	Saline lake microbial communities from Rauer Islands, Antarctica - Metagenome Filla 1 #563 (v2)	Environmental	Open in IMG/M
3300028413	Saline lake microbial communities from Rauer Islands, Antarctica - Metagenome Hop E1 #496 (v2)	Environmental	Open in IMG/M
3300032435	Freshwater microbial communities from Lake Bonney liftoff mats and glacier meltwater in Antarctica - BON-03 (spades assembly)	Environmental	Open in IMG/M
3300032462	Freshwater microbial communities from Lake Fryxell liftoff mats and glacier meltwater in Antarctica - FRY-02 (spades assembly)	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0075443_103891041	3300006165	Marine	MSQVSKRSEVVYINGAPSTPGYLLALLRELSHVPRGLTEIAEAKQVRKTN
Ga0075443_103891042	3300006165	Marine	MSQVSRRSEVAYINGAPSTPGYLLALLRELSHVPRGLTEIAEAKQVRKTN
Ga0105050_105507271	3300007516	Freshwater	VVPERMSQMSKPSEVVYINGAPSTPGYLLALLRELSHVPRGLTE
Ga0105050_108725941	3300007516	Freshwater	RMSQVSKRPEVVYINGAPSTPGYLLAFLQELSHIPRDLTEIAEAT*
Ga0105055_100265379	3300007519	Freshwater	VSKRSEVAYINGAPSTPGYLLALLRELLHVPRGLTEIAEAKQVRKTNQ
Ga0105055_102071491	3300007519	Freshwater	VSKRSEVVYINGAPSTPGYLLALLRELSHVPRGLTEIAEAKQVRKT
Ga0105055_102811651	3300007519	Freshwater	MSQVLWRSEVAYINGAPSTPGYLLALLRELSHVPRGLTEIAEAKQV
Ga0105055_103434511	3300007519	Freshwater	VSKRSEVVYINGAPSTPGYLLALLRELSHVPRGLTEIAEAKQVRKTN
Ga0105055_103690801	3300007519	Freshwater	VYINGAPSTHGYLLALLRELLQCPRALTEITKPKQVRKMNLTRFLYHFN
Ga0105055_106682031	3300007519	Freshwater	SEVAYINGAPSTPGYLLALLRELSHVPRGLTEIAEAKQVRKTNQSGMLYH*
Ga0105055_107339031	3300007519	Freshwater	MSQVLKGSEVVYINSAPSTPGYLLALLRELSHVPRGLTEIAEAKQVRKTNQSGIL
Ga0105055_109002102	3300007519	Freshwater	VSKRSEVVYINGAPSSPGYLLALLQKLSHVPRGLTEIAEAKQVRKTNQSGILYHFKKRVQKS
Ga0105055_109505581	3300007519	Freshwater	MIYCLDPVVPARMSQVSRRSEVVYINGAPSTPGYLLALLRELSHVPRGLTEIAE
Ga0105055_110629081	3300007519	Freshwater	KRSEVVYINGAPSTPGYLLALLRELSHVPRGLTEIAEAKQAQ*
Ga0105055_111632511	3300007519	Freshwater	VSRRSEVACINGAPSTPGYLLALLRELSQCPRALTEITKPKQVRKMNLTRFLY
Ga0105055_111706191	3300007519	Freshwater	VVPEGMSQVSRRSEVAYINGAPSTPGYLLALLRERSHVPRGLTEIAEAKQV*
Ga0105054_100613011	3300007520	Freshwater	NGAPSTPGYLLALLRELSHVPRGLTEIAEAKQVRKTNQSGNRSE*
Ga0105054_100864944	3300007520	Freshwater	MDRVVPEGLSQFSRRSEVAYINGAPSTPGFLLALLRELSQCPWALTEITKPKQVRKMNL
Ga0105054_101647151	3300007520	Freshwater	VERMSQVSKRSEVVYINGAPSTPGYLLALLRELSHVPRGLTEIAEAKQ
Ga0105054_103679341	3300007520	Freshwater	MSQVSKRSEVVYINGAPSTFGYFLALLRELSHVPRGLTEIAEAKQVRKTN
Ga0105054_104615941	3300007520	Freshwater	LEVVHINGAPSTPGYLLALLRELSHVPRGLTEIAEA
Ga0105054_106306131	3300007520	Freshwater	VSKRSEVVYINSAPSTPGCLLALLRELSHVPRGLTEIAEAKQVRKTNQSGILY
Ga0105054_108393072	3300007520	Freshwater	VSTRSEVVYINGAPSTPGYRLALLRELSHVPRGLTEIAEAK
Ga0105054_109990961	3300007520	Freshwater	RSEVAYINGAPSTPGYLLALLRELSHVPRGLTEIAEAKQVRKTNQSGMLYH*
Ga0105054_111971751	3300007520	Freshwater	VSRRSEVVYINGAPSTPGYLLALLRELSQCPRALTEITKLKQ
Ga0105053_100496811	3300007522	Freshwater	EVAYINGAPSTPGYLLALLRELSHVPRGLTEIAEAKQVRKTNQSGMLYH*
Ga0105053_104974963	3300007522	Freshwater	SEVVYINGAPSAPGYLLALLRELSHVPRGLTEIAEAKQVRKTIQTCIL*
Ga0105053_105939031	3300007522	Freshwater	MSQGLRRSEVVYTNGAPSTPGYLLALLRELSQCPRALTEITKPKQ
Ga0105053_106096031	3300007522	Freshwater	VSRRLEVAYINGAPSTPGNLLALLRELWHVLRGLTEIAEAKQVRKTNQ
Ga0105053_106220811	3300007522	Freshwater	MSQVSKRSEVVYINGAPSTPSYLLALLRELSHVPRGLTEIAEAKQVRKTNQS
Ga0105053_107418082	3300007522	Freshwater	VYTNGAPSTPGYLLALLRKLSQCPQALTEITKPKQVRKMNLTRFLYHF
Ga0105053_109483621	3300007522	Freshwater	ERMSQVSKRSEVVYINGAPSTPGYLLALLWELSHVPRDLTENAEAKQVQKTTKEVFCTS*
Ga0105053_109876581	3300007522	Freshwater	VSRRSEVAHINGAPSTPGYLLALLRELSQCPRALTEITKPKQV
Ga0105053_109966341	3300007522	Freshwater	VSKGSEIVYISGAPSTPGYLLALLRELSQCPRALT
Ga0105053_112259131	3300007522	Freshwater	MSQVSKQPEVVYLNGSPPTPGYLLALLRELSHVPRGLTEITEAKQV
Ga0105053_112259132	3300007522	Freshwater	VSRRSEVVYINGAPSTPGYLLALLRELSQCPRALTEITKLKQVRKM
Ga0105053_112353611	3300007522	Freshwater	VSRRSEIAYINGAPSTPGYLLALLRELSQCPRALTEITKPKQVRKMNL
Ga0105053_112371851	3300007522	Freshwater	MSQVSKRSEVVYINGAPSTPGYLLALLRELSHVPRGLTEIAEAKQV
Ga0105053_112371852	3300007522	Freshwater	MSQVSRRSEVVYINGAPSTPGYLLALLRELSQCPRALTEITKLKQVRK
Ga0105052_103669741	3300007523	Freshwater	VVPERMSQMSKPSEVVYINGAPSTPGYLLALLRELSHVPRGLTEMAE
Ga0105052_109869161	3300007523	Freshwater	MSQVSRRLEFAYLHGVPSTPGYLLALLRELSLCPRALTEITKLKQVRKMN
Ga0105052_110673491	3300007523	Freshwater	VSKRSEVVYISSAPSTSGYLLALLQEPSHVPRELTEIAEAKQVRKTN
Ga0105051_102134651	3300007722	Freshwater	VSKRSEVLYINSAPLTPGNLLALLRELSHVPRGLTEI
Ga0105051_102879722	3300007722	Freshwater	VSKRSEVVYINGAPSTPGYLLALLRELSHVPRGLTE
Ga0105051_105898841	3300007722	Freshwater	MSQVSKRSEVVYINGAPSTPGYLLALLQELSHVPRDLTEIAEAKQV
Ga0105051_108037791	3300007722	Freshwater	MSQVSRRSEVAYINGAPSTPGYLLALLRELSHVPRGLTEIAEAKQVRKTNQSGILYHFKKRGPKVD
Ga0105051_110430061	3300007722	Freshwater	MGSRCQVSKRSDVAYINGAPSTPGYLLALLRELSHVPRGLTEIAE
Ga0105051_112339592	3300007722	Freshwater	VSRRSEVAYINGAPSTPGYLLALLRELSQCPRALTEITKPKQVRK
Ga0136587_10579881	3300011188	Saline Lake	MGEVSRRLEVVYINGAPSTPGYLLALLWELSHVPRGLTEIAEAKQVRKTNQS
Ga0136587_11443682	3300011188	Saline Lake	VSKRSEIVYINGAPSKPGYLLALLRELSHVPRGLTEI
Ga0136587_11731241	3300011188	Saline Lake	INGAPSTPGYLLALLRELSHVPRGLTEIAEAKQVRKTNQSGMLHH*
Ga0136559_10098631	3300012037	Saline Lake	MSQVSKRSEVVYINGAPSTPGYLLALLRELSHVPRGLTEIAESK
Ga0136559_10921861	3300012037	Saline Lake	VSRRSEVAYINGAPSTPGYLLTLLRELSHVPRDFTEIAEVKQVRKTNQTGI
Ga0136559_11111932	3300012037	Saline Lake	MSQVPRRSEVACINGAPSTPGYLLALLRELSHVPQGLTEIAE
Ga0136559_11392581	3300012037	Saline Lake	MSHVSRRSEVAYINGAPSTPGYLLALLRELSHVPRGLTEIAEAKQ
Ga0136559_11670132	3300012037	Saline Lake	VPEGMSQVSRRSEVVYINGALSTPGYLLAILRELSQCLRALTEITKPKQVEK*
Ga0136559_11714641	3300012037	Saline Lake	MSQVLKRLEVVHINGAPSTPGYLLALLRELSHVPRGLTEIAEA
Ga0136559_12375102	3300012037	Saline Lake	VSKRSEVVYINGAPSTPGYLLALERELSHVPRGLTEIAEAKQVRKTNQSGILY
Ga0136559_12491771	3300012037	Saline Lake	VSRRSEVAYINGAPSTLCCLLALLRELSHVPRGLTEIAEAKQVRKTNQTGILY
Ga0136586_10840831	3300012272	Saline Lake	VSKRSEVVYINGAPSTPGYLLALLRELSHVPRGLTEIAEA
Ga0136586_11132881	3300012272	Saline Lake	MSQGLRRSEVVYTNGAPSTPGYLLALLRELSQCPRALTEITKPKQVRKMNLTR
Ga0136586_11257161	3300012272	Saline Lake	VSKRSEVVYINGAPTTPGYRLALLRELSHVPRGLTEIAEAKQVRKTNQS
Ga0136586_11851981	3300012272	Saline Lake	MSQVSKRSEVVYINGALSTPGYLLALLRELSHVPRDLTEIAE
Ga0209491_100769231	3300027832	Freshwater	MDRVVPEGLSQFSRRSEVAYINGAPSTPGFLLALLRELSQCPWALTEITKPKQVRK
Ga0209491_100963291	3300027832	Freshwater	PVVPEGMSQVSRRSEVAYINGAPSTPGYLLALLRERSHVPRGLTEIAEAKQV
Ga0209491_100968281	3300027832	Freshwater	PGGMSQVLWRSEVAYINGAPSTPGYLLALLRELSHVPRGLTEIAEAKQVRKTNQSGMLYH
Ga0209491_101068961	3300027832	Freshwater	VSKRSEVVYINGAPSTPGYLLALLRELSHVPRGLAEIAEAKQVRKTNQSGILYQSKKRVA
Ga0209491_101419451	3300027832	Freshwater	RMSQVSKRSEVVYINGAPSTPGYLLALLRELSHVPRGLTEIAEAKQAQ
Ga0209491_101597681	3300027832	Freshwater	VSKRSEVVYINGAPSTPGYLLALLRELSHVPRGLTEIAEAKQ
Ga0209491_101947803	3300027832	Freshwater	MSQVSKRSEVVYINGAPSTPSYLLALLRELSHVPRGLTEIAEAKQVRKT
Ga0209491_102697151	3300027832	Freshwater	VSRRSEVAYINSAPSTPGYLLALLRELSHVPRGLTEIAEVKQVRKTNQSGILYQ
Ga0209491_104535161	3300027832	Freshwater	VSKRSEVVYINGAPSTPGYLLALLRELSHVPRGLTEIAEAK
Ga0209491_104866511	3300027832	Freshwater	VSKRSEVVYINGAPSTPGYLLALLRELSHVPLGLTEIAEAKQVRKTN
Ga0209390_100361641	3300027848	Freshwater	MSQVLWRSEVAYINGAPSTPGYLLALLRELSHVPRGLTEIAEAKQVRKTNQSGMLYH
Ga0209390_101389823	3300027848	Freshwater	MMSQVSKRSEVLYKKGAPSTPGYLLALLRELSHVPRGLAEIAEAKQVQKTNQSGIVYQF
Ga0209390_101723221	3300027848	Freshwater	MIYCLDPVVPARMSQVSRRSEVVYINGAPSTPGYLLALLRELSHVPRGLTEIAEAKQVRKTNQ
Ga0209390_102179421	3300027848	Freshwater	VSRRSEDAYINGAPSTPGYLLALLRELSHVPRGLTEIAEAKQVR
Ga0209390_103058081	3300027848	Freshwater	MSQASKRSEVVYINGAPSTPGYLLALLRELSHVPRGLTGIA
Ga0209390_103442591	3300027848	Freshwater	MSQVSKRSEVVYINGAPSTPGYLLALLRELSHVPRDLTPVA
Ga0209390_103832091	3300027848	Freshwater	AYINGAPSTPGYLLALLRELSHVPRGLTEIAEAKQVRKTNQSGILY
Ga0209390_105108071	3300027848	Freshwater	SRRSEVAYINGAPSTPGYLMALLRALSHVPRGLTENAETKHV
Ga0209390_105576921	3300027848	Freshwater	VSRRSEVAYINGAPSTPGYLLALLRERSHVPRGLTEIAEAKQV
Ga0209390_107543111	3300027848	Freshwater	MSQVSKRSEVAYINGAPSTPGYLLTLLWELLQCPRALTDITKPQVRKINLTRCLYQ
Ga0209390_107543112	3300027848	Freshwater	MSQVSKRSEIAYINGAPSTPGYLLALLRELSRVQRGLTEIAEAKQVRKTKQS
Ga0209702_102749241	3300027976	Freshwater	MSKPSEVVYINGAPSTPGYLLALLRELSHVPRGLTEMAEAKQV
Ga0209284_100987461	3300027983	Freshwater	MSQVSRRSEVAYINGAPPTPGYLLALLRELSQCPRALTEITKPKQLRK
Ga0209284_101614291	3300027983	Freshwater	LVVVERMSQVSKRSEVVYINGAPSTPGYLLALLRELSHVPRGLTEIAEEKQVRKTNQSGILY
Ga0209284_104206711	3300027983	Freshwater	MSKRSEVVYINGAPSTPGYLLALLRELSHVPRGLTEIAEAKQVRKTSQS
Ga0209284_104844201	3300027983	Freshwater	VSRRSEVAYINGAPSTPGYLLALLRELSQCPRALTEITNPKQVRKMSLTRFL
Ga0209284_105955991	3300027983	Freshwater	VSRRSDVANINDAPSTPGYLLALLRELSHVPRGLT
Ga0306896_10454091	3300028369	Saline Lake	VSKRSEVVYINGAPSTPGYLLALLRELSHVPRGLTEIAESK
Ga0306896_10722481	3300028369	Saline Lake	MSQVSRRSEVAYINGVPSTPGYLVTILWELSHVPRGLTAIAEAKQVR
Ga0306896_10767811	3300028369	Saline Lake	MSQVSKRSEVVYINGAPTTPCYLLALVRELSHVPRGLTEIAEARAKLARKTNQSGILYQ
Ga0306897_10676222	3300028373	Saline Lake	VSRRLEVVYINGAPSTPGYLLALLWELSHVPRGLTEIAEAKQVRKTNQS
Ga0306897_10879141	3300028373	Saline Lake	MSQVSRRSEVAYINGVPSTPGYLVTILWELSHVPRGLTAIA
Ga0306897_10983771	3300028373	Saline Lake	VSKRSEVVYINGAPSTPSYLLALLRELLHVSRGLTEIAEA
Ga0306870_10420211	3300028413	Saline Lake	VSRRSEVVYINGAPSTPGYLLALLRELSQCPRALTEITKPKQVQKM
Ga0306870_10425291	3300028413	Saline Lake	MSQVSRRSEVAYINGAPSTPGYLLALLQELLQCPWALTEIT
Ga0335398_101803832	3300032435	Freshwater	VSRRSEVAYINGAPSTPGYLLALLRELSHVPRALTEITK
Ga0335398_103426941	3300032435	Freshwater	VSRRSEVVYINGAPSTPGYLLALLRELSHIPRGLT
Ga0335398_103574621	3300032435	Freshwater	MSQVSKRSEVVYIHGAPSTPGYLLALLRELSHVPRGLTEIAEAKQVRKTNQSGIL
Ga0335398_103832811	3300032435	Freshwater	VSKQPEVVYLNGSPPTPGYLLALLRELSHVPRGLTEITEAKQVRKTNQSGILY
Ga0335398_104554972	3300032435	Freshwater	LDPIVPERMGQVSKRSEVVYINGAPSAPGYLLALLRELSHVPRGLTEIAEAKQVRKTIQTCIL
Ga0335398_105385931	3300032435	Freshwater	MSQVSRRSEVAYINGAPSTSGYLLALLWELSQCPWALTEITKPKQVRKM
Ga0335398_106106991	3300032435	Freshwater	MSQVSRRSEVAYTNGAPSTPGYLLALLRELSHVPRGLTENAETKQ
Ga0335398_107752601	3300032435	Freshwater	MNQVSRRSESVYINSAPSTPGYLLALLRELSQCSQALTEI
Ga0335398_108719141	3300032435	Freshwater	VSKRSQVAYINGAPSAPGYLLALLRELSHVPRGLTEIAEAKQIRK
Ga0335398_108782281	3300032435	Freshwater	VSRRWEVAYINGAPSTPGFFLALLRELSQCPRTLTEITVSQQVRKMNLTRFLYH
Ga0335396_100911031	3300032462	Freshwater	MSQVSKRSEVACINRAPSTPGYLLALLWELLQCPRALTEITKPKQVRKTNLTRVLYQ
Ga0335396_101703622	3300032462	Freshwater	VSKRSEVLYINSAPLTPGNLLALLRELSHVPRGLTEIAEA
Ga0335396_102511962	3300032462	Freshwater	MSQVSKRSEGVYINAAPSTPGYLLALLRELSHVPRGLTQIAEAKKVWKKNLTRFLYQFKK
Ga0335396_104760792	3300032462	Freshwater	VSKGSEIVYISGAPSTPGYLLALLRELSQCPRALTAIIKLKQV
Ga0335396_106088332	3300032462	Freshwater	VSRRLEVAYINSAPSTPGYLLAPLRELSQFPRALTEITKPKQVRKM
Ga0335396_108523511	3300032462	Freshwater	VVYINGAPSTPGYLLALLRELSQCLRALTEITQPRQVRKMNLTHFLYHFK
Ga0335396_109088131	3300032462	Freshwater	MMSQVSKQSEVVYVNGAPSTPSYLLALLRELSHVPRGLTEIAEAKQVRKTNQSGTL
Ga0335396_109270011	3300032462	Freshwater	VSRRSEVAYINGAPSTPGYLLALLRELSQCPRALTEI
Ga0335396_109580931	3300032462	Freshwater	VSKRSEVVYINGAPSTPGYLLALLRELSHVPRGLTEIA

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F077774

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences