Metagenome / Metatranscriptome Family F077742

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F077742
Family Type	Metagenome / Metatranscriptome
Number of Sequences	117
Average Sequence Length	68 residues
Representative Sequence	MKKFVLASLFVVAAAAMQPALAAKAAEPKLCGKGTKICACGKLPAAMWQCCNAKAKCDCSGGLPNCKH
Number of Associated Samples	99
Number of Associated Scaffolds	117

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	82.05 %
% of genes near scaffold ends (potentially truncated)	29.06 %
% of genes from short scaffolds (< 2000 bps)	82.91 %
Associated GOLD sequencing projects	91
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.36

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Bacteria (62.393 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (17.949 % of family members)
Environment Ontology (ENVO)	Unclassified (23.932 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (66.667 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 17.71% β-sheet: 14.58% Coil/Unstructured: 67.71%
Feature Viewer

Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.36
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.36
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 117 Family Scaffolds
PF05726	Pirin_C	40.17
PF00580	UvrD-helicase	23.93
PF13361	UvrD_C	7.69
PF13194	DUF4010	4.27
PF00857	Isochorismatase	0.85
PF13440	Polysacc_synt_3	0.85
PF13410	GST_C_2	0.85
PF00370	FGGY_N	0.85
PF00211	Guanylate_cyc	0.85
PF00378	ECH_1	0.85
PF13409	GST_N_2	0.85

COG ID	Name	Functional Category	% Frequency in 117 Family Scaffolds
COG1741	Redox-sensitive bicupin YhaK, pirin superfamily	General function prediction only [R]	40.17
COG0210	Superfamily I DNA or RNA helicase	Replication, recombination and repair [L]	23.93
COG1074	3Ã¢â‚¬â„¢-5Ã¢â‚¬â„¢ helicase subunit RecB of the DNA repair enzyme RecBCD (exonuclease V)	Replication, recombination and repair [L]	23.93
COG3973	DNA helicase IV	Replication, recombination and repair [L]	23.93
COG1335	Nicotinamidase-related amidase	Coenzyme transport and metabolism [H]	0.85
COG1535	Isochorismate hydrolase	Secondary metabolites biosynthesis, transport and catabolism [Q]	0.85
COG2114	Adenylate cyclase, class 3	Signal transduction mechanisms [T]	0.85

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	62.39 %
Unclassified	root	N/A	37.61 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	62.39 %
Unclassified	root	N/A	37.61 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	62.39 %
Unclassified	root	N/A	37.61 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	59.83 %
Unclassified	root	N/A	37.61 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	44.44 %
Unclassified	root	N/A	37.61 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1.71 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	37.61 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	31.62 %
Rhodobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales	8.55 %
Enterobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales	1.71 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.85 %
Sphingomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	37.61 %
Roseobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae	8.55 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	2.56 %
Enterobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Enterobacteriaceae	1.71 %
Xanthobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae	1.71 %
Sphingomonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae	0.85 %
Burkholderiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	37.61 %
Roseovarius	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae → Roseovarius	8.55 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	2.56 %
Klebsiella/Raoultella group	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Enterobacteriaceae → Klebsiella/Raoultella group	1.71 %
Xanthobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae	1.71 %
Cupriavidus	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Cupriavidus	0.85 %
Sphingomonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	37.61 %
unclassified Roseovarius	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae → Roseovarius → unclassified Roseovarius	8.55 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	2.56 %
Klebsiella	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Enterobacteriaceae → Klebsiella/Raoultella group → Klebsiella	1.71 %
Xanthobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae	1.71 %
unclassified Cupriavidus	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Cupriavidus → unclassified Cupriavidus	0.85 %
Sphingomonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	37.61 %
Roseovarius sp. SCSIO 43702	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae → Roseovarius → unclassified Roseovarius → Roseovarius sp. SCSIO 43702	8.55 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	2.56 %
Klebsiella pneumoniae	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Enterobacteriaceae → Klebsiella/Raoultella group → Klebsiella → Klebsiella pneumoniae	1.71 %
Xanthobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae	1.71 %
Cupriavidus sp. UYMSc13B	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Cupriavidus → unclassified Cupriavidus → Cupriavidus sp. UYMSc13B	0.85 %
Sphingomonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas	0.85 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2170459004\|F62QY1Z01EO09Q	Not Available	512	Open in IMG/M
3300001546\|JGI12659J15293_10141865	Not Available	524	Open in IMG/M
3300002245\|JGIcombinedJ26739_100834854	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	802	Open in IMG/M
3300003505\|JGIcombinedJ51221_10002361	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	5148	Open in IMG/M
3300004080\|Ga0062385_11060626	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Enterobacteriaceae → Klebsiella/Raoultella group → Klebsiella → Klebsiella pneumoniae	547	Open in IMG/M
3300004092\|Ga0062389_101508274	All Organisms → cellular organisms → Bacteria → Proteobacteria	856	Open in IMG/M
3300004635\|Ga0062388_100700579	Not Available	945	Open in IMG/M
3300005332\|Ga0066388_100141269	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2972	Open in IMG/M
3300005332\|Ga0066388_100367041	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	2086	Open in IMG/M
3300005332\|Ga0066388_100978306	Not Available	1413	Open in IMG/M
3300005332\|Ga0066388_106674680	All Organisms → cellular organisms → Bacteria → Proteobacteria	581	Open in IMG/M
3300005347\|Ga0070668_102202236	Not Available	509	Open in IMG/M
3300005434\|Ga0070709_11430927	Not Available	560	Open in IMG/M
3300005435\|Ga0070714_100359393	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1369	Open in IMG/M
3300005457\|Ga0070662_101198984	Not Available	652	Open in IMG/M
3300005541\|Ga0070733_10210300	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae → Roseovarius → unclassified Roseovarius → Roseovarius sp. SCSIO 43702	1274	Open in IMG/M
3300005548\|Ga0070665_102223505	Not Available	552	Open in IMG/M
3300005610\|Ga0070763_10418668	Not Available	756	Open in IMG/M
3300005616\|Ga0068852_101871059	Not Available	622	Open in IMG/M
3300005764\|Ga0066903_100858774	Not Available	1634	Open in IMG/M
3300005921\|Ga0070766_11106416	All Organisms → cellular organisms → Bacteria → Proteobacteria	547	Open in IMG/M
3300006047\|Ga0075024_100059918	Not Available	1604	Open in IMG/M
3300006057\|Ga0075026_100035786	All Organisms → cellular organisms → Bacteria → Proteobacteria	2288	Open in IMG/M
3300006086\|Ga0075019_10282882	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	995	Open in IMG/M
3300006102\|Ga0075015_100136379	Not Available	1265	Open in IMG/M
3300006172\|Ga0075018_10026387	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2287	Open in IMG/M
3300006176\|Ga0070765_100459277	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae → Roseovarius → unclassified Roseovarius → Roseovarius sp. SCSIO 43702	1194	Open in IMG/M
3300006354\|Ga0075021_10097023	Not Available	1749	Open in IMG/M
3300006953\|Ga0074063_13886492	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae → Roseovarius → unclassified Roseovarius → Roseovarius sp. SCSIO 43702	1131	Open in IMG/M
3300009521\|Ga0116222_1220832	All Organisms → cellular organisms → Bacteria → Proteobacteria	817	Open in IMG/M
3300009700\|Ga0116217_10141827	Not Available	1611	Open in IMG/M
3300010048\|Ga0126373_12577452	Not Available	567	Open in IMG/M
3300010358\|Ga0126370_10907801	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales → Enterobacteriaceae → Klebsiella/Raoultella group → Klebsiella → Klebsiella pneumoniae	796	Open in IMG/M
3300010359\|Ga0126376_12185497	Not Available	598	Open in IMG/M
3300010359\|Ga0126376_12938303	Not Available	526	Open in IMG/M
3300010366\|Ga0126379_12599249	Not Available	604	Open in IMG/M
3300010373\|Ga0134128_11093861	Not Available	880	Open in IMG/M
3300010376\|Ga0126381_101173987	All Organisms → cellular organisms → Bacteria	1109	Open in IMG/M
3300010376\|Ga0126381_101204381	Not Available	1094	Open in IMG/M
3300010376\|Ga0126381_104887109	Not Available	515	Open in IMG/M
3300010396\|Ga0134126_11243927	Not Available	826	Open in IMG/M
3300011418\|Ga0153954_1043291	All Organisms → cellular organisms → Bacteria → Proteobacteria	1154	Open in IMG/M
3300012078\|Ga0153999_1068900	Not Available	655	Open in IMG/M
3300012957\|Ga0164303_11216368	Not Available	552	Open in IMG/M
3300012984\|Ga0164309_10648022	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	831	Open in IMG/M
3300012988\|Ga0164306_10797386	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	760	Open in IMG/M
3300013307\|Ga0157372_12670678	Not Available	573	Open in IMG/M
3300015371\|Ga0132258_11638853	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Cupriavidus → unclassified Cupriavidus → Cupriavidus sp. UYMSc13B	1623	Open in IMG/M
3300015374\|Ga0132255_100391557	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2021	Open in IMG/M
3300016319\|Ga0182033_11641607	All Organisms → cellular organisms → Bacteria → Proteobacteria	582	Open in IMG/M
3300016357\|Ga0182032_10411961	All Organisms → cellular organisms → Bacteria	1095	Open in IMG/M
3300016404\|Ga0182037_10183301	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1609	Open in IMG/M
3300016445\|Ga0182038_11639177	Not Available	579	Open in IMG/M
3300017822\|Ga0187802_10363609	Not Available	570	Open in IMG/M
3300017933\|Ga0187801_10035627	All Organisms → cellular organisms → Bacteria → Proteobacteria	1765	Open in IMG/M
3300017955\|Ga0187817_10224507	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae → Roseovarius → unclassified Roseovarius → Roseovarius sp. SCSIO 43702	1197	Open in IMG/M
3300017970\|Ga0187783_10968888	Not Available	613	Open in IMG/M
3300017972\|Ga0187781_10004548	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	10329	Open in IMG/M
3300017972\|Ga0187781_10179715	Not Available	1490	Open in IMG/M
3300017972\|Ga0187781_10273833	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae → Roseovarius → unclassified Roseovarius → Roseovarius sp. SCSIO 43702	1196	Open in IMG/M
3300017972\|Ga0187781_10421440	Not Available	954	Open in IMG/M
3300017995\|Ga0187816_10031417	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2154	Open in IMG/M
3300018007\|Ga0187805_10186588	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	946	Open in IMG/M
3300018062\|Ga0187784_10783965	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	761	Open in IMG/M
3300020581\|Ga0210399_10314506	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1307	Open in IMG/M
3300020582\|Ga0210395_10013546	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	6027	Open in IMG/M
3300020582\|Ga0210395_10188535	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1546	Open in IMG/M
3300020583\|Ga0210401_10191631	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1901	Open in IMG/M
3300020583\|Ga0210401_10990647	Not Available	699	Open in IMG/M
3300020583\|Ga0210401_11270290	Not Available	594	Open in IMG/M
3300021168\|Ga0210406_10049873	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3670	Open in IMG/M
3300021180\|Ga0210396_10441942	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae → Roseovarius → unclassified Roseovarius → Roseovarius sp. SCSIO 43702	1141	Open in IMG/M
3300021401\|Ga0210393_10842649	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	745	Open in IMG/M
3300021403\|Ga0210397_10724352	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	766	Open in IMG/M
3300021404\|Ga0210389_11339253	All Organisms → cellular organisms → Bacteria → Proteobacteria	548	Open in IMG/M
3300021407\|Ga0210383_10038144	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	4009	Open in IMG/M
3300021420\|Ga0210394_11298686	All Organisms → cellular organisms → Bacteria → Proteobacteria	622	Open in IMG/M
3300021474\|Ga0210390_10062474	All Organisms → cellular organisms → Bacteria	3071	Open in IMG/M
3300021559\|Ga0210409_10832962	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	796	Open in IMG/M
3300021560\|Ga0126371_10639181	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae → Roseovarius → unclassified Roseovarius → Roseovarius sp. SCSIO 43702	1213	Open in IMG/M
3300022533\|Ga0242662_10293717	All Organisms → cellular organisms → Bacteria → Proteobacteria	540	Open in IMG/M
3300022557\|Ga0212123_10169390	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1659	Open in IMG/M
3300022708\|Ga0242670_1065141	All Organisms → cellular organisms → Bacteria → Proteobacteria	546	Open in IMG/M
3300022724\|Ga0242665_10256464	All Organisms → cellular organisms → Bacteria → Proteobacteria	597	Open in IMG/M
3300025933\|Ga0207706_10040797	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas	4115	Open in IMG/M
3300025972\|Ga0207668_12089621	Not Available	510	Open in IMG/M
3300027652\|Ga0209007_1061295	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	952	Open in IMG/M
3300027909\|Ga0209382_10823375	Not Available	986	Open in IMG/M
3300027911\|Ga0209698_10061116	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3254	Open in IMG/M
3300028906\|Ga0308309_10545010	Not Available	1005	Open in IMG/M
3300030706\|Ga0310039_10088936	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae → Roseovarius → unclassified Roseovarius → Roseovarius sp. SCSIO 43702	1305	Open in IMG/M
3300031090\|Ga0265760_10132158	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	808	Open in IMG/M
3300031231\|Ga0170824_103062536	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae → Roseovarius → unclassified Roseovarius → Roseovarius sp. SCSIO 43702	1252	Open in IMG/M
3300031446\|Ga0170820_17589864	All Organisms → cellular organisms → Bacteria → Proteobacteria	657	Open in IMG/M
3300031708\|Ga0310686_103030255	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	8452	Open in IMG/M
3300031708\|Ga0310686_115255395	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae	1209	Open in IMG/M
3300031718\|Ga0307474_10533352	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	922	Open in IMG/M
3300031744\|Ga0306918_10184843	Not Available	1563	Open in IMG/M
3300031833\|Ga0310917_10110148	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1782	Open in IMG/M
3300031890\|Ga0306925_10186752	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae → Roseovarius → unclassified Roseovarius → Roseovarius sp. SCSIO 43702	2234	Open in IMG/M
3300031890\|Ga0306925_11411051	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	686	Open in IMG/M
3300031912\|Ga0306921_10160028	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2636	Open in IMG/M
3300031912\|Ga0306921_10901420	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae	1004	Open in IMG/M
3300031942\|Ga0310916_11663471	Not Available	517	Open in IMG/M
3300031947\|Ga0310909_10039996	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3541	Open in IMG/M
3300031954\|Ga0306926_10326197	Not Available	1899	Open in IMG/M
3300032076\|Ga0306924_11986911	Not Available	600	Open in IMG/M
3300032160\|Ga0311301_10011172	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	28474	Open in IMG/M
3300032261\|Ga0306920_100141034	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3588	Open in IMG/M
3300032261\|Ga0306920_100972218	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1238	Open in IMG/M
3300032261\|Ga0306920_102790971	Not Available	665	Open in IMG/M
3300032261\|Ga0306920_104057180	Not Available	531	Open in IMG/M
3300032892\|Ga0335081_10873640	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1064	Open in IMG/M
3300032895\|Ga0335074_10580363	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1128	Open in IMG/M
3300032896\|Ga0335075_10855998	All Organisms → cellular organisms → Bacteria → Proteobacteria	841	Open in IMG/M
3300032898\|Ga0335072_10581681	Not Available	1132	Open in IMG/M
3300032955\|Ga0335076_10669216	Not Available	920	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	89.74%
Host-Associated	Host-Associated	10.26%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	76.07%
Aquatic	Environmental → Aquatic	13.68%
Plants	Host-Associated → Plants	8.55%
Fungi	Host-Associated → Fungi	1.71%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	76.07%
Freshwater	Environmental → Aquatic → Freshwater	6.84%
Sediment	Environmental → Aquatic → Sediment	5.98%
Rhizosphere	Host-Associated → Plants → Rhizosphere	5.98%
Rhizoplane	Host-Associated → Plants → Rhizoplane	2.56%
Mycelium	Host-Associated → Fungi → Mycelium	1.71%
Thermal Springs	Environmental → Aquatic → Thermal Springs	0.85%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	53.85%
Loam	Environmental → Terrestrial → Soil → Loam	12.82%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	9.40%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	6.84%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	5.98%
Soil	Host-Associated → Plants → Rhizosphere → Soil	4.27%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	1.71%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	1.71%
Unclassified	Host-Associated → Fungi → Mycelium → Unclassified	1.71%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	0.85%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	0.85%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	33.33%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	19.66%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	11.11%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	9.40%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	5.98%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	4.27%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	4.27%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	2.56%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	1.71%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	1.71%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	1.71%
Unclassified	Host-Associated → Fungi → Mycelium → Unclassified → Unclassified	1.71%
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	0.85%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	0.85%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	0.85%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	17.95%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	12.82%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	7.69%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	5.98%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	5.13%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	5.13%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	4.27%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	4.27%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	4.27%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	3.42%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	3.42%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	3.42%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	2.56%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	2.56%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.71%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	1.71%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	1.71%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	1.71%
Attine Ant Fungus Gardens	Host-Associated → Fungi → Mycelium → Unclassified → Unclassified → Attine Ant Fungus Gardens	1.71%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	0.85%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.85%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.85%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grass Soil	0.85%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.85%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	0.85%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	0.85%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.85%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.85%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.85%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2170459004	Grass soil microbial communities from Rothamsted Park, UK - March 2009 indirect MP BIO 1O1 lysis 0-21cm (2)	Environmental	Open in IMG/M
3300001546	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O1	Environmental	Open in IMG/M
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300003505	Forest soil microbial communities from Harvard Forest LTER, USA - Combined assembly of forest soil metaG samples (ASSEMBLY_DATE=20140924)	Environmental	Open in IMG/M
3300004080	Coassembly of ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300004092	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004635	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005347	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG	Host-Associated	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005457	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG	Host-Associated	Open in IMG/M
3300005541	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1	Environmental	Open in IMG/M
3300005548	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG	Host-Associated	Open in IMG/M
3300005610	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3	Environmental	Open in IMG/M
3300005616	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2	Host-Associated	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005921	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6	Environmental	Open in IMG/M
3300006047	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2013	Environmental	Open in IMG/M
3300006057	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2012	Environmental	Open in IMG/M
3300006086	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2013	Environmental	Open in IMG/M
3300006102	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2013	Environmental	Open in IMG/M
3300006172	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2014	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300006354	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2012	Environmental	Open in IMG/M
3300006953	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHMB (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300009521	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_9_AC metaG	Environmental	Open in IMG/M
3300009700	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_4_PS metaG	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010396	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2	Environmental	Open in IMG/M
3300011418	Attine ant fungus gardens microbial communities from Florida, USA - TSFL038 MetaG	Host-Associated	Open in IMG/M
3300012078	Attine ant fungus gardens microbial communities from North Carolina, USA - TSNC083 MetaG	Host-Associated	Open in IMG/M
3300012957	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MG	Environmental	Open in IMG/M
3300012984	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MG	Environmental	Open in IMG/M
3300012988	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_242_MG	Environmental	Open in IMG/M
3300013307	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG	Host-Associated	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300017822	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_2	Environmental	Open in IMG/M
3300017933	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_1	Environmental	Open in IMG/M
3300017955	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_2	Environmental	Open in IMG/M
3300017970	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300017972	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300017995	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_1	Environmental	Open in IMG/M
3300018007	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_5	Environmental	Open in IMG/M
3300018062	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300020582	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-O	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300021180	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O	Environmental	Open in IMG/M
3300021401	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-O	Environmental	Open in IMG/M
3300021403	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-O	Environmental	Open in IMG/M
3300021404	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-O	Environmental	Open in IMG/M
3300021407	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O	Environmental	Open in IMG/M
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental	Open in IMG/M
3300021474	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-O	Environmental	Open in IMG/M
3300021559	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300022533	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-7-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022557	Paint Pots_combined assembly	Environmental	Open in IMG/M
3300022708	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022724	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-17-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300025933	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025972	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300027652	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM1H0_O2 (SPAdes)	Environmental	Open in IMG/M
3300027909	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)	Host-Associated	Open in IMG/M
3300027911	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012 (SPAdes)	Environmental	Open in IMG/M
3300028906	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)	Environmental	Open in IMG/M
3300030706	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_6_BS metaG (v2)	Environmental	Open in IMG/M
3300031090	Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031446	Fir Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031718	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031833	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032160	Sb_50d combined assembly (MetaSPAdes)	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300032892	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.5	Environmental	Open in IMG/M
3300032895	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.3	Environmental	Open in IMG/M
3300032896	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.4	Environmental	Open in IMG/M
3300032898	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.1	Environmental	Open in IMG/M
3300032955	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.5	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
E4B_05601600	2170459004	Grass Soil	MKKFVLASLFVVAAAAMQPALAAKAAEPKLCGKGTKICACGKLPAAMWQCCNAKAKCDCSGGLPNCKH
JGI12659J15293_101418652	3300001546	Forest Soil	MKKFVLASLFVVSALAMQPAFAGSPADHLCTKGTKTCACGKLPGAMFQCCRAGAKCDCSHGLPDCKSH*
JGIcombinedJ26739_1008348542	3300002245	Forest Soil	LAAGAGGPPHVCAKGQLLCACGKLPGAMFQCCQAKTKAKCDCSGGVPNCKYQ*
JGIcombinedJ51221_100023614	3300003505	Forest Soil	MKKFVLASLFVVAAAAMQPTLAAKAAEPKLCGKGTNICACGKLPAAMWQCCNAKAKCDCSGGLSNCKH*
Ga0062385_110606262	3300004080	Bog Forest Soil	MKRIVLASLFMVAAASMQPAFAAGSAAQLCTKGMKLCACGKLPGAMWSCCHPQAA
Ga0062389_1015082742	3300004092	Bog Forest Soil	MKRIVLASLFMVAAASMQPAFAAGSAAQLCTKGMKLCACGKLPGAMWSCCHPQAACDCSGGLPNCKH*
Ga0062388_1007005792	3300004635	Bog Forest Soil	MKRIVLASLFMVAAASMQPAFAAGSAAQLCTKGMKLCACGKLPGAMWSCCHPQAACDCSGGLP
Ga0066388_1001412694	3300005332	Tropical Forest Soil	MKKFVLASLFVVAAAAMQPALAAKAAEPKLCGKGTKICACGKLPAAMWQCCNAKAKCDCSGGLPNCKNH*
Ga0066388_1003670413	3300005332	Tropical Forest Soil	MKKFVLASLFVVAAAAMQPALAAKGGEAKLCAKGQTVCACGKLPGAMFQCCQKKPKAKCDCSGGMPNCKYH*
Ga0066388_1009783062	3300005332	Tropical Forest Soil	MKKFVLASLFVVAAAAMQPALAAKGSEAKLCPKGQTVCACGKLPGAMFQCCQKNPKAKCDCSGGLPNCKYH*
Ga0066388_1066746802	3300005332	Tropical Forest Soil	MKKFVLASLFVVAAATMQPALAAKGGEAKLCAKGQTVCACGKLPGAMFQCCQKKPKAKCDCSGGMPNCKYH*
Ga0070668_1022022361	3300005347	Switchgrass Rhizosphere	MKKFVLASLFVVAAAAMQPALAAKAAEPKLCGKGTKICACGKMPAAMWQCCSAKAKCD
Ga0070709_114309271	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	MKKFVLASLFVVAAAAMQPALAAKGGEAKLCGKGQMVCACGKLPGAMFQCCEKKPKAKCDCSGGTPNCEYH*
Ga0070714_1003593932	3300005435	Agricultural Soil	MKKFVLASLFVVAAAAMQPALAAKGGEAKLCGKGQMVCACGKLPGAMFQCCEKKPKAKCDCSGGTPNCKYH*
Ga0070662_1011989841	3300005457	Corn Rhizosphere	MKKFVLASLFVVAAAAMQPALAAKAAEPKLCGKGTKICACGKMPAAMWQCCSAKAKCDCSGGLPNCKSH*
Ga0070733_102103002	3300005541	Surface Soil	MKKIILASVLIVAAIGAQPAFAAGPAGLCTKGMKLCACGKLPGAMWNCCDPRTTCDCSGGIPNCKH*
Ga0070665_1022235051	3300005548	Switchgrass Rhizosphere	MKKFVLASLFVVAAAAMQPALAAKGGEAKLCAKGQMVCACGKLPGAMFQCCEKKPKAKCDCSGGTPNCKYH*
Ga0070763_104186681	3300005610	Soil	MKKFVLASLFVVAAAAMQPALAAKAAEPKLCGKGTKICACGKLPAAMWQCCNAKAKCDCS
Ga0068852_1018710592	3300005616	Corn Rhizosphere	MKKFVLASLFVVAAAAMQPALAAKGGEAKLCAKGQTVCACGKLPGAMFQCCQKKPEAKCDCSGGTPNCKYH*
Ga0066903_1008587742	3300005764	Tropical Forest Soil	MKKFVLASLFVVAAAAMQPALAAKAAEPKLCGTKICACGKLPAAMWQCCNTKAKCDGSGG
Ga0070766_111064161	3300005921	Soil	MKKFVLASLFVVAAAAMQPALAAKAAEPKLCGKGTKICACGKLPAAMWQCCNAKAKCDCSGGLPNCKH*
Ga0075024_1000599183	3300006047	Watersheds	MKKFVLASLFVVAAAALQPALAAGAGGPAHVCAKGQLLCACGKLPGAMFQCCQAKTK
Ga0075026_1000357862	3300006057	Watersheds	MKKFVLASLFVVAAAALQPALAAGAGGPAHMCAKGELLCACGKLPGAMFQCCHAKTKAKCDCSSGVPNCKYH*
Ga0075019_102828822	3300006086	Watersheds	MKKFVLASLFVVAAAALQPALAAGAGGPPHVCAKGQLLCACGKLPGAMFQCCQAKTKAKCDCSGGVPNCKYQ*
Ga0075015_1001363793	3300006102	Watersheds	MKKFVLASLFVVAAAALQPALAAGAGGPAHICAKGELLCACGKLPGAMFQCCHAKTKAKCDCSSGVPNCKYH*
Ga0075018_100263873	3300006172	Watersheds	MKKFVLASLFVVAAAALQPALAAGAGGPAHVCAKGQLLCACGKLPGAMFQCCQAKTKAKCDCSGGVPNCKYQ*
Ga0070765_1004592772	3300006176	Soil	FVLASLFVVAAAALQPALAAGAGGPAHMCAKGELLCACGKLPGAMFQCCHAKTKAKCDCSGGVPNCKYQ*
Ga0075021_100970231	3300006354	Watersheds	MKKFVLASLFVVAAAALQPALAAGAGGPAHICAKGELLCACGKLPGAMFQCCQAKTKAKCDCSGGVPNCKYQ*
Ga0074063_138864921	3300006953	Soil	HKRFVISEGRMKKFVLASLFVVAAAAMQPTLAAKAAEPKLCGKGTKICACGKLPAAMWQCCNAKAKCDCSGGLSNCKH*
Ga0116222_12208321	3300009521	Peatlands Soil	MKKFVLASLFVVAATALQPAFAGGPQICAKGMKVCACGKLPAAMWNCCNAKAKCDCSGGLPDCKH*
Ga0116217_101418271	3300009700	Peatlands Soil	MKKFVLASLFVVAATALQPAFAGGPQICAKGMKVCACGKLPAAMWNCCNARAKCDCSGGLPDCKH*
Ga0126373_125774521	3300010048	Tropical Forest Soil	MKKFVLASLFVVAAAAMQPAPAAKGSEAKLCPKGQTVCACGKLPGAMFQCCQKNPKAKCDCSGGLPNCKYH*
Ga0126370_109078011	3300010358	Tropical Forest Soil	MKKSVLASLFVVAAAAMQPALGAKGSEAKLCPKGQTVCACGKLPGAMFQCCEKKPKAKCDCSGGTPNCKYH*
Ga0126376_121854971	3300010359	Tropical Forest Soil	RMKKFVLASLFVVAAAAMQPALAAKGSEAKLCPKGQTVCACGKLPGAMFQCCQKNPKAKCDCSGGLPNCKYH*
Ga0126376_129383031	3300010359	Tropical Forest Soil	MKKFVLASLFVVAAAAMQPALAAKGGEAKLCAKGQTVCACGKLPGAMFQCCEKKPKAKCDCSGGTPNCKYH*
Ga0126379_125992492	3300010366	Tropical Forest Soil	MKKFVLASLFVVAAAAMQPALAAKAAEPKLCGKGTKICACGKLPAAMWQSCNAKAKCDCSGG
Ga0134128_110938612	3300010373	Terrestrial Soil	MKKFVLASLFVVAAAAMQPALAAKAAEPKLCGKGTKICACGKMPAAMWQCCSANAKCDCSGGLPNCKSH*
Ga0126381_1011739872	3300010376	Tropical Forest Soil	MKKFVLASLFVVAAAAMQPALAAKGGEAKLCGKGQTVCACGKLPGAMFQCCQKKPKAKCDCSGGMPNCKYH*
Ga0126381_1012043812	3300010376	Tropical Forest Soil	MKKYVLASLFVVAAAAMQPALAAKAAEPKLCGKGTKICACGKLPAAMWQCCNAKAKWDCSGGLPDCKH*
Ga0126381_1048871092	3300010376	Tropical Forest Soil	MKKSVLVSLFVVAAAAMQPAIAAKGSEAKLCPKGQTVCACGKLPGAMFQCCHPKAKCDCSGGLPNCKYH*
Ga0134126_112439271	3300010396	Terrestrial Soil	MKKFVLASLFVVAAAAMQPALAAKGGEAKLCGKGQMVCACGKLPGAMFQCCEKKPKAKCDCS
Ga0153954_10432912	3300011418	Attine Ant Fungus Gardens	MKKFVLASLFAVSALAMQPAFAANPADHLCTKGTKTCACGKLPGAMFQCCHAHGKCDCSHGLPDCKYH*
Ga0153999_10689002	3300012078	Attine Ant Fungus Gardens	MKKVILVSVLIVAAIGAQPAFAAGPAGLCTKGMKLCACGKLPGAMWNCCDPRTTCDCSGGIP
Ga0164303_112163683	3300012957	Soil	MKKFVLASLFVVAAAAMQPTLAAKAAEPKLCGKGTKICACGKLPAAMWQCCNAKAKCDCSGGLSNCKH*
Ga0164309_106480222	3300012984	Soil	MKKFVLASLFVVAAAAMQPTLAAKAAEPKLCGKGTNIGACGKLPAAMWQCCNAKAKCDCSGGLSNCKH*
Ga0164306_107973862	3300012988	Soil	MKQFVLASLFVVAAAAMQPTLAAKAAEPKLCGKGTNICACGKLPAAMWQCCNAKAKCDCSGGLSNCKH*
Ga0157372_126706781	3300013307	Corn Rhizosphere	MKKFVLASLFVVAAAAMQPALAAKGGEAKLCGKGQMVCACGKLPGAMFQCCEKKPKAQCD
Ga0132258_116388533	3300015371	Arabidopsis Rhizosphere	MKKLVLASLFVVAAAAMQPALAAKGGEAKLCAKGQMVCACGKLPGAMFQCCEKKPKAKCNCSGGTPNCKYH*
Ga0132255_1003915573	3300015374	Arabidopsis Rhizosphere	GGAYKKFVLASLFVVAAAAMQPALAAKGGEAKLCAKGQMVCACGKLPGAMFQCCEKKPKAKCDCSGGTPNCKYH*
Ga0182033_116416071	3300016319	Soil	GRMKKFVFASLFVVAASAMQPALAAKAGAPQLCAKGTKVCACGKLPEAMWQCCNAKAKCDCSGGLPDCKH
Ga0182032_104119611	3300016357	Soil	MKKFVLASLFVVAAAAMQPAPAAKGSEAKLCPKGQTVCACGKLPGAMFQCCHPKAKCDCSGGLPNCKYH
Ga0182037_101833012	3300016404	Soil	MKKFVLASLFVVAAAAMQPALAAKAGVPQLCAKGTKVCACGKLPAAMWQCCNAKAKCDCSGGLPDCKH
Ga0182038_116391772	3300016445	Soil	MKKFVLASLFVVAAAAVQPALAAKAGVPQLCAKGTKVCACGKLPAAMWQCCNAKATCDCSGGL
Ga0187802_103636091	3300017822	Freshwater Sediment	VKRFAESEGRMKKIILASVLIVAAIGAQPAFAAGPAGLCTNGKKLCACGKLPGAMWSCCDPRAKCDCSGGIPNCKH
Ga0187801_100356272	3300017933	Freshwater Sediment	MKKFVLASLFVVAAAALQPALAAGAGGPAHMCAKGELLCACGKLPGAMFQCCHAKTKAKCDCSSGVPNCKYH
Ga0187817_102245072	3300017955	Freshwater Sediment	MKKFVLASLFVVAAAAMQPALAAGAGGPAHVCAKGQLLCACGKLPGAMFQCCQAKTKAKCDCSGGVPNCKYH
Ga0187783_109688882	3300017970	Tropical Peatland	MKKFVLASLFVVAAAAMQPAFAAGMGGPAHLCTKSAVLCACGKLPGGMFQCCHTHAKCDCSRGLPDCKNH
Ga0187781_100045487	3300017972	Tropical Peatland	MKKLVLASLFVVAVAGLQPALAGGPQLCAKGTQVCACGKLPAAIWQCCSAKAKCDCSGGLPDCKH
Ga0187781_101797152	3300017972	Tropical Peatland	MKKFVLASLFVVAAAAMQPAFAAGMGGPAHLCAKGTKVCACGKLPGAMFQCCPAHAVKCDCSGGLPNCKNH
Ga0187781_102738331	3300017972	Tropical Peatland	AMQPAIAAGMGGLCSKGMKVCACGKLPGAMFQCCNPMAKCDCARGLPDCAHK
Ga0187781_104214402	3300017972	Tropical Peatland	MKKIILASVLVVAAIGAQPAFAAGPAGLCSKGMKLCACGKLPGAMWNCCNPRAKCDCSGGIANCKH
Ga0187816_100314172	3300017995	Freshwater Sediment	MKKFVLASLFVVAAAALQPALAAGAGGPAHVCAKGQLLCACGKLPGAMFQCCHAKTKAKCDCSSGVPNCKYH
Ga0187805_101865881	3300018007	Freshwater Sediment	MKKFVLASLFVVAAAAMQPALAAGAGGPAHVCAKGQLLCACGKLPGAIFQCCQAKTKAKCDCSGGVPNCKYH
Ga0187784_107839651	3300018062	Tropical Peatland	SEGRMRKIILASVLVVAAIGAQPAFAAGPAGLCTKGMKLCACGKLPGAMWNCCNPRAKCDCSGGVPNCKH
Ga0210399_103145062	3300020581	Soil	MKKFVLASLFVVAAAAMQPTLAAKAAEPKLCGKGTKICACGKLPAAMWQCCNAKAKCDCSGGLPNCKH
Ga0210395_100135465	3300020582	Soil	MKKIILASVLIVAAIGAQPAFAAGPAGLCTKGMKLCACGKLPGAMWNCCDPRTTCDCSGGIPNCKH
Ga0210395_101885352	3300020582	Soil	MKKFVLASLFVVAAAAMQPALAAKAAEPKLCGKGTKICACGKLPAAMWQCCNAKAKCDCSGGLPNCKR
Ga0210401_101916312	3300020583	Soil	MKKFVLASLFVVAAAAMQPTLAAKAAEPKLCGKGTNICACGKLPAAMWQCCNAKAKCDCSGGLSNCKH
Ga0210401_109906471	3300020583	Soil	MKKFVLASLFVVSALAMQPAFAGSPADHLCTKGTKTCACGKLPGAMFQCCRAGAKCDCSHGLPDCKSH
Ga0210401_112702901	3300020583	Soil	MKKIILASVLIVAAIGAQPAFAAGPAGLCTKGMKLCACGKLPGAMWNCCDPRTTCDC
Ga0210406_100498733	3300021168	Soil	MKKFVLASLFIVAAAAMQPTLAAKAAEPKLCGKGTNICACGKLPAAMWQCCNAKAKCDCSGGLSNCKH
Ga0210396_104419422	3300021180	Soil	MKKFVLASLFVVAAAAMQPTLAAKAAEPKLCGKGTKICACGKLPAAMWQCCNAKAKCDCSGGLSNCKH
Ga0210393_108426491	3300021401	Soil	MKKIILASVFIVAAIGAQPAFAAGPAGLCTKGMKLCACGKLPGAMWNCCDPRTTCDCSGGIPNCKH
Ga0210397_107243522	3300021403	Soil	MKKFVLASLFVVAAAAMQPALAAKAAEPKLCGKGTKICACGKLPAAMWQCCNAKAKCDCSGGLSNRKH
Ga0210389_113392531	3300021404	Soil	MKKFVLASLFVVAAAAMQPALAAKAAEPKLCGKGTRICACGKLPAAMWQCCNAKAKCDCSGGLSNCKH
Ga0210383_100381443	3300021407	Soil	MKKFVLASLFVVAAAAMQPTLAAKAAEPKLCGKGTKICACGKLPAAMWQCCNAKAKCDCSGGLPNCKR
Ga0210394_112986862	3300021420	Soil	MKKIILASVLIVAAIGAQPAFAAGPAGLCTKGMKLCACGKLPGAMWNCCDPRAKCDCSGGIPNCKH
Ga0210390_100624742	3300021474	Soil	MKKFVLASLFVVAAAAMQPAIAAGPGGLCSKGMKLCACGKLPGAMFQCCNHIAKCDCSRGLPDCKH
Ga0210409_108329622	3300021559	Soil	LEGRMKKFVLASLFVVAAAAMQPTLAAKAAEPKLCGKGTKICACGKLPAAMWQCCNAKAKCDCSGGLSNCKH
Ga0126371_106391811	3300021560	Tropical Forest Soil	KFVLASLFVVAAAAMQPALAAKGGEAKLCAKGQTVCACGKLPGAMFQCCQKKPKAKCDCSGGMPNCKYH
Ga0242662_102937171	3300022533	Soil	EGRMKKFVLASLFVVAAAALQPALAAGAGGPPHVCAKGQLLCACGKLPGAMFQCCQAKTKAKRDCSGGVPNCKYQ
Ga0212123_101693902	3300022557	Iron-Sulfur Acid Spring	MKRIVLASLFFVAAASLQPALAAGPAQLCAKGMKLCACGKLPGAMWNCCHPQAKCDCSGGLPNCKH
Ga0242670_10651412	3300022708	Soil	MKKFVLASLFVVAAAAMQPALAAKAAEPKLCGKGTKICACGKLPAAMWQCCNAKAKCDCSGGPPNCKH
Ga0242665_102564641	3300022724	Soil	RMKKFVLASLFVVAAAAMQPTLAAKAAEPKLCGKGTKICACGKLPAAMWQCCNAKAKCDCSGGLSNCKH
Ga0207706_100407975	3300025933	Corn Rhizosphere	MKKFVLASLFVVAAAAMQPALAAKAAEPKLCGKGTKICACGKMPAAMWQCCSAKAKCDCSGGLPNCKSH
Ga0207668_120896211	3300025972	Switchgrass Rhizosphere	MKKFVLASLFVVAAAAMQPALAAKAAEPKLCGKGTKICACGKMPAAMWQCCSAKAKCDC
Ga0209007_10612951	3300027652	Forest Soil	MKKIVLASLFVIAAATTQPVFAASGDHLCTKGATLCACGKLPGAMWNCCHAHAKCDCSGGLPNCKR
Ga0209382_108233751	3300027909	Populus Rhizosphere	TPHKRFAISEGRMKKFVLASLFVVAAAAMQPALAAKAAEPKLCGKGTKICACGKMPAAMWQCCSAKAKCDCSGGLPNCKSH
Ga0209698_100611162	3300027911	Watersheds	MKKFVLASLFVVAAAALQPALAAGAGGPAHICAKGELLCACGKLPGAMFQCCHAKTKAKCDCSGGVPNCKYQ
Ga0308309_105450102	3300028906	Soil	MKKIILASVLIVAAIGAQPAFAAGPAGLCTKGMKLCACGKLPGAMWNCCDPRTTCDCSG
Ga0310039_100889361	3300030706	Peatlands Soil	LKRFAISEGLMKKFVLASLFVVAATALQPAFAGGPQICAKGMKVCACGKLPAAMWNCCNARAKCDCSGGLPDCKH
Ga0265760_101321582	3300031090	Soil	MKQNILASAFIVAAISAQPALAAGPAGLCTNGMKLCACGKLPGAMWNCCDPRATCDCSGGIPNCKH
Ga0170824_1030625361	3300031231	Forest Soil	MKKFVLASLFVVAAAALQPALAAGAGGPPHVCAKGQLLCACGKLPGAMFQCCQAKTKAKCDCSGGVPNCKYQ
Ga0170820_175898642	3300031446	Forest Soil	MKKLVLASLFVVAAAALQPALAAGAGGPPHVCAKGQLLCACGKLPGAMFQCCQAKTKAKCDCSGGVPNCKYQ
Ga0310686_1030302556	3300031708	Soil	MKKIILASALIVAAISAQPALAAGPAGLCTKGMKLCACGKLPGAMWNCCDPRATCDCSGGIPNCKH
Ga0310686_1152553952	3300031708	Soil	MKRIVLASLFFVAAASLQPALAAGPAQLCAKGMKLCACGKLPGAMWNCCHAQAKCDCSGGLPNCKH
Ga0307474_105333521	3300031718	Hardwood Forest Soil	VEAAAASQPALAAGAGGPPHVCAKGQLLCACGKLPGAMFQCCQAKTKAKCDCSGGVPNCKYQ
Ga0306918_101848432	3300031744	Soil	MKKFVLSSLFVVAAAAVQPALAAKAGVPQLCAKGTKVCACGKLPAAMWQCCNAKAKCDCSGGLPDCKH
Ga0310917_101101482	3300031833	Soil	MKKFVLASLFVVAAAAVQPALAAKAGVPQLCAKGTKVCACGKLPAAMWQCCNAKAKCDCSGGLPDCKH
Ga0306925_101867522	3300031890	Soil	MKKFVLASLRVVAAAAMQPAIAAGLGGLCSKGMKLCACGKLPGAMFQCCNQIAKCDCSRGLPDCKH
Ga0306925_114110511	3300031890	Soil	KTPPHKRFVISEGRMKKFVLASLFVVAAAAMQPALAAKAAEPKLCGKGTKICACGKLPAAMWQCCNAKAKCDCSGGLPDCKH
Ga0306921_101600281	3300031912	Soil	MKKFVLASLFVVAAAAMQPALAAKAAEPKLCGKGTKICACGKLPAAMWQCCNAKAKCDCSGGLPDCKH
Ga0306921_109014202	3300031912	Soil	MKKLVLLSLFAVAVAGSQPAFAAGGPHLCAKAMNVCACGKLPAAMWQCCSAKAKCDCSGGLPNCKNH
Ga0310916_116634711	3300031942	Soil	RMKKFVLASLLVVAAAAMQPAIAAGLGGLCSKGMKLCACGKLPGAMFQCCNQIAKCDCSRGLPDCKH
Ga0310909_100399962	3300031947	Soil	MKKFVLASLFVVAAAAVQPALAAMAGVPQLCAKGTKVCACGKLPAAMWQCCNAKAKCDCSGGLPDCKH
Ga0306926_103261972	3300031954	Soil	MKKFVLASLFVVAAAAMQPALAAKGSEAKLCPKGQTVCACGKLPGAMFQCCQKNPKAKCDCSGGLPNCKYH
Ga0306924_119869112	3300032076	Soil	MKKFVLASLFVVAAAAMQPALAAKAGAPQLCAKGTKVCACGKLPEAMWQCCNAKAKCDCSGGLPDCKH
Ga0311301_1001117225	3300032160	Peatlands Soil	MKKFVLASLFVVAATALQPAFAGGPQICAKGMKVCACGKLPAAMWNCCNARAKCDCSGGLPDCKH
Ga0306920_1001410344	3300032261	Soil	MKKVVLLSLFAVAVAGSQPAFAAGGSHLCAKAMNVCACGKLPAAMWQCCSAKAKCDCSGGLPNCKNH
Ga0306920_1009722182	3300032261	Soil	MKKFVLASLFVVAAAAMQPALAAKGSEAKLCPKGQTVCACGKLPGAMFQCCHPKAKCDCSGGLPNCKYH
Ga0306920_1027909713	3300032261	Soil	VLASLRVVAAAAMQPAIAAGLGGLCSKGMKLCACGKLPGAMFQCCNQIAKCDCSRGLPDCKH
Ga0306920_1040571801	3300032261	Soil	MKKFVLASLFVVAAAAMQPALAAKAGAPQLCAKGTKVCACGKLPEAMWQCCNAKATCDCSGGLPDCKH
Ga0335081_108736401	3300032892	Soil	MKKIILASVLVVAAIGAQPAFAAGPAGLCTNGKKLCACGKLPGGMWNCCDPRTKCDCSAGIPNCKH
Ga0335074_105803631	3300032895	Soil	MKKFVLASLFVVSALAMQPAFAGNPADHLCKKGTKTCACGKLPGAMFQCCSAKAKCDCSHGLPDCKNH
Ga0335075_108559981	3300032896	Soil	MKKFVLASLFVVSALAMQPAFAGNPADHLCKKGAKTCACGKLPGAMFECCSAKAKCDCSHGLPDCKNH
Ga0335072_105816811	3300032898	Soil	MKKFVLASLFVVSALAMQPAFAGNPADHLCKKGAKTCACGKLPGAMFQCCSAKAKCDCSHGLPDCKNH
Ga0335076_106692162	3300032955	Soil	MKKIILASLFIVAAIGAQPVFAASSSAGLCSKSMKLCACGKLPGAMWSCCDPRAKCDCGSGIPNCKH

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F077742

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences