Metagenome Family F077555

Basic Information
Family ID	F077555
Family Type	Metagenome
Number of Sequences	117
Average Sequence Length	51 residues
Representative Sequence	LRRLAADLRAGAFEACEARAAAARAILWRLTIGKLREGNPLFLAANGFGE
Number of Associated Samples	111
Number of Associated Scaffolds	117

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	6.36 %
% of genes near scaffold ends (potentially truncated)	85.47 %
% of genes from short scaffolds (< 2000 bps)	89.74 %
Associated GOLD sequencing projects	107
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.72

Most Common Taxonomy
Group	Unclassified (62.393 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (15.385 % of family members)
Environment Ontology (ENVO)	Unclassified (28.205 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (52.137 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 46.15% β-sheet: 0.00% Coil/Unstructured: 53.85%
Feature Viewer

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SCOP family	SCOP domain	Representative PDB	TM-score
a.104.1.0: automated matches	d2hi4a_	2hi4	0.70616
a.24.9.1: alpha-catenin/vinculin	d1dova_	1dov	0.6802
a.27.1.0: automated matches	d2d5ba1	2d5b	0.67434
a.118.1.30: FAT domain	d4jspa3	4jsp	0.67304
f.54.1.2: Amino acid antiporter-like	d3giaa_	3gia	0.67141

Pfam ID	Name	% Frequency in 117 Family Scaffolds
PF00926	DHBP_synthase	96.58
PF02894	GFO_IDH_MocA_C	0.85
PF07690	MFS_1	0.85
PF13469	Sulfotransfer_3	0.85

COG ID	Name	Functional Category	% Frequency in 117 Family Scaffolds
COG0108	3,4-dihydroxy-2-butanone 4-phosphate synthase	Coenzyme transport and metabolism [H]	96.58
COG0673	Predicted dehydrogenase	General function prediction only [R]	0.85

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	62.39 %
All Organisms	root	All Organisms	37.61 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	62.39 %
cellular organisms	root	All Organisms → cellular organisms	37.61 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	62.39 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	37.61 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	62.39 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	29.06 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	62.39 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	26.50 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	62.39 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	17.95 %
unclassified Betaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria	0.85 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	62.39 %
Beijerinckiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae	4.27 %
Phyllobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae	3.42 %
Xanthobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae	1.71 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	0.85 %
Acetobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	0.85 %
Rhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	62.39 %
Rhodoblastus	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → Rhodoblastus	4.27 %
Mesorhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium	3.42 %
unclassified Xanthobacteraceae	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → unclassified Xanthobacteraceae	1.71 %
Rhizobium/Agrobacterium group	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group	0.85 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	0.85 %
Acetobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	62.39 %
unclassified Rhodoblastus	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → Rhodoblastus → unclassified Rhodoblastus	4.27 %
unclassified Mesorhizobium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium → unclassified Mesorhizobium	3.42 %
Xanthobacteraceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → unclassified Xanthobacteraceae → Xanthobacteraceae bacterium	1.71 %
Rhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Rhizobium	0.85 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	0.85 %
Acetobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	62.39 %
Rhodoblastus sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → Rhodoblastus → unclassified Rhodoblastus → Rhodoblastus sp.	4.27 %
Mesorhizobium sp. LSJC264A00	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium → unclassified Mesorhizobium → Mesorhizobium sp. LSJC264A00	3.42 %
Xanthobacteraceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → unclassified Xanthobacteraceae → Xanthobacteraceae bacterium	1.71 %
Rhizobium etli	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Rhizobium → Rhizobium etli	0.85 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	0.85 %
Acetobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	62.39 %
Rhodoblastus sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → Rhodoblastus → unclassified Rhodoblastus → Rhodoblastus sp.	4.27 %
Mesorhizobium sp. LSJC264A00	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium → unclassified Mesorhizobium → Mesorhizobium sp. LSJC264A00	3.42 %
Xanthobacteraceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → unclassified Xanthobacteraceae → Xanthobacteraceae bacterium	1.71 %
Rhizobium etli CFN 42	strain	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Rhizobium → Rhizobium etli → Rhizobium etli CFN 42	0.85 %
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	0.85 %
Acetobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	0.85 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2170459017\|G14TP7Y01A1FZU	Not Available	501	Open in IMG/M
3300000887\|AL16A1W_10279099	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	717	Open in IMG/M
3300000955\|JGI1027J12803_101561967	All Organisms → cellular organisms → Bacteria	1141	Open in IMG/M
3300001471\|JGI12712J15308_10184622	Not Available	545	Open in IMG/M
3300001661\|JGI12053J15887_10129984	All Organisms → cellular organisms → Bacteria	1339	Open in IMG/M
3300001664\|P5cmW16_1031363	Not Available	992	Open in IMG/M
3300002245\|JGIcombinedJ26739_100658715	Not Available	925	Open in IMG/M
3300004082\|Ga0062384_100959127	Not Available	609	Open in IMG/M
3300004082\|Ga0062384_101444967	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	507	Open in IMG/M
3300004156\|Ga0062589_102746676	Not Available	513	Open in IMG/M
3300005175\|Ga0066673_10884881	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → unclassified Xanthobacteraceae → Xanthobacteraceae bacterium	508	Open in IMG/M
3300005184\|Ga0066671_10611121	Not Available	707	Open in IMG/M
3300005332\|Ga0066388_104741307	Not Available	692	Open in IMG/M
3300005335\|Ga0070666_10629609	All Organisms → cellular organisms → Bacteria → Proteobacteria	784	Open in IMG/M
3300005338\|Ga0068868_101236267	Not Available	692	Open in IMG/M
3300005343\|Ga0070687_101110619	Not Available	579	Open in IMG/M
3300005438\|Ga0070701_10665277	Not Available	697	Open in IMG/M
3300005458\|Ga0070681_10674835	All Organisms → cellular organisms → Bacteria	949	Open in IMG/M
3300005529\|Ga0070741_11280016	Not Available	614	Open in IMG/M
3300005537\|Ga0070730_10644182	Not Available	674	Open in IMG/M
3300005541\|Ga0070733_10230262	All Organisms → cellular organisms → Bacteria	1216	Open in IMG/M
3300005542\|Ga0070732_10695828	Not Available	619	Open in IMG/M
3300005564\|Ga0070664_101140770	Not Available	735	Open in IMG/M
3300005834\|Ga0068851_10982068	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → unclassified Xanthobacteraceae → Xanthobacteraceae bacterium	532	Open in IMG/M
3300005921\|Ga0070766_10906701	Not Available	604	Open in IMG/M
3300006176\|Ga0070765_100039784	All Organisms → cellular organisms → Bacteria	3752	Open in IMG/M
3300006854\|Ga0075425_101114157	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	899	Open in IMG/M
3300007982\|Ga0102924_1281406	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	670	Open in IMG/M
3300009038\|Ga0099829_11049379	Not Available	676	Open in IMG/M
3300009089\|Ga0099828_11651611	Not Available	564	Open in IMG/M
3300009090\|Ga0099827_10742284	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	849	Open in IMG/M
3300009094\|Ga0111539_11908573	Not Available	689	Open in IMG/M
3300009137\|Ga0066709_101241801	Not Available	1096	Open in IMG/M
3300009521\|Ga0116222_1156399	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → Rhodoblastus → unclassified Rhodoblastus → Rhodoblastus sp.	981	Open in IMG/M
3300010048\|Ga0126373_10593554	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → Rhodoblastus → unclassified Rhodoblastus → Rhodoblastus sp.	1159	Open in IMG/M
3300010373\|Ga0134128_10545541	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → Rhodoblastus → unclassified Rhodoblastus → Rhodoblastus sp.	1292	Open in IMG/M
3300010375\|Ga0105239_13397279	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	518	Open in IMG/M
3300010400\|Ga0134122_11678116	Not Available	662	Open in IMG/M
3300011269\|Ga0137392_11121635	Not Available	644	Open in IMG/M
3300011425\|Ga0137441_1125542	Not Available	633	Open in IMG/M
3300011999\|Ga0120148_1021717	Not Available	1431	Open in IMG/M
3300012176\|Ga0153952_1148286	Not Available	518	Open in IMG/M
3300012208\|Ga0137376_11211875	Not Available	644	Open in IMG/M
3300012210\|Ga0137378_10670680	All Organisms → cellular organisms → Bacteria	948	Open in IMG/M
3300012210\|Ga0137378_10959651	Not Available	768	Open in IMG/M
3300012210\|Ga0137378_11397188	Not Available	614	Open in IMG/M
3300012357\|Ga0137384_10783117	Not Available	772	Open in IMG/M
3300012360\|Ga0137375_10673228	Not Available	849	Open in IMG/M
3300012361\|Ga0137360_10862214	Not Available	780	Open in IMG/M
3300012685\|Ga0137397_10953218	Not Available	634	Open in IMG/M
3300012923\|Ga0137359_11220794	Not Available	640	Open in IMG/M
3300012929\|Ga0137404_11237037	Not Available	687	Open in IMG/M
3300012930\|Ga0137407_12360174	Not Available	508	Open in IMG/M
3300012988\|Ga0164306_10202070	All Organisms → cellular organisms → Bacteria	1395	Open in IMG/M
3300013503\|Ga0120127_10098367	Not Available	652	Open in IMG/M
3300014169\|Ga0181531_10078623	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1952	Open in IMG/M
3300014497\|Ga0182008_10521687	Not Available	656	Open in IMG/M
3300015245\|Ga0137409_10114951	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2485	Open in IMG/M
3300015265\|Ga0182005_1227893	Not Available	569	Open in IMG/M
3300015371\|Ga0132258_10580962	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	2811	Open in IMG/M
3300016387\|Ga0182040_10604331	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium → unclassified Mesorhizobium → Mesorhizobium sp. LSJC264A00	888	Open in IMG/M
3300017972\|Ga0187781_10820606	Not Available	675	Open in IMG/M
3300017975\|Ga0187782_10925034	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium → unclassified Mesorhizobium → Mesorhizobium sp. LSJC264A00	677	Open in IMG/M
3300018058\|Ga0187766_11143312	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	561	Open in IMG/M
3300018088\|Ga0187771_10346868	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Rhizobium → Rhizobium etli → Rhizobium etli CFN 42	1248	Open in IMG/M
3300018431\|Ga0066655_11266059	Not Available	527	Open in IMG/M
3300018433\|Ga0066667_12155013	Not Available	517	Open in IMG/M
3300018469\|Ga0190270_11849953	Not Available	660	Open in IMG/M
3300018482\|Ga0066669_10299066	All Organisms → cellular organisms → Bacteria	1305	Open in IMG/M
3300018482\|Ga0066669_11411850	Not Available	631	Open in IMG/M
3300019879\|Ga0193723_1152777	Not Available	617	Open in IMG/M
3300021171\|Ga0210405_10649711	Not Available	818	Open in IMG/M
3300021401\|Ga0210393_10345882	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → Rhodoblastus → unclassified Rhodoblastus → Rhodoblastus sp.	1210	Open in IMG/M
3300021433\|Ga0210391_10282443	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → Rhodoblastus → unclassified Rhodoblastus → Rhodoblastus sp.	1303	Open in IMG/M
3300021441\|Ga0213871_10177370	Not Available	658	Open in IMG/M
3300021560\|Ga0126371_10690908	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1169	Open in IMG/M
3300022557\|Ga0212123_10610193	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	687	Open in IMG/M
3300025157\|Ga0209399_10067013	All Organisms → cellular organisms → Bacteria	1470	Open in IMG/M
3300025664\|Ga0208849_1019768	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2252	Open in IMG/M
3300025915\|Ga0207693_11053624	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	619	Open in IMG/M
3300025961\|Ga0207712_12033265	Not Available	514	Open in IMG/M
3300026023\|Ga0207677_10355046	All Organisms → cellular organisms → Bacteria	1229	Open in IMG/M
3300026023\|Ga0207677_11358009	Not Available	654	Open in IMG/M
3300026305\|Ga0209688_1066274	Not Available	651	Open in IMG/M
3300026537\|Ga0209157_1374817	Not Available	513	Open in IMG/M
3300027381\|Ga0208983_1082161	Not Available	605	Open in IMG/M
3300027388\|Ga0208995_1023256	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1076	Open in IMG/M
3300027565\|Ga0209219_1041973	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1140	Open in IMG/M
3300027706\|Ga0209581_1174077	Not Available	689	Open in IMG/M
3300027725\|Ga0209178_1367550	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	541	Open in IMG/M
3300027862\|Ga0209701_10071851	All Organisms → cellular organisms → Bacteria → Proteobacteria	2189	Open in IMG/M
3300027882\|Ga0209590_10335497	Not Available	973	Open in IMG/M
3300027986\|Ga0209168_10634217	Not Available	510	Open in IMG/M
3300028801\|Ga0302226_10407613	Not Available	569	Open in IMG/M
3300028906\|Ga0308309_10758327	Not Available	843	Open in IMG/M
3300030494\|Ga0310037_10278116	Not Available	719	Open in IMG/M
3300031231\|Ga0170824_111469462	Not Available	542	Open in IMG/M
3300031234\|Ga0302325_13103737	Not Available	533	Open in IMG/M
3300031236\|Ga0302324_100498400	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1779	Open in IMG/M
3300031543\|Ga0318516_10578892	Not Available	642	Open in IMG/M
3300031595\|Ga0265313_10347471	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	588	Open in IMG/M
3300031681\|Ga0318572_10770829	Not Available	572	Open in IMG/M
3300031708\|Ga0310686_103744520	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium → unclassified Mesorhizobium → Mesorhizobium sp. LSJC264A00	1085	Open in IMG/M
3300031793\|Ga0318548_10252057	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium → unclassified Mesorhizobium → Mesorhizobium sp. LSJC264A00	868	Open in IMG/M
3300031910\|Ga0306923_11424261	Not Available	729	Open in IMG/M
3300031912\|Ga0306921_12728860	Not Available	507	Open in IMG/M
3300032782\|Ga0335082_11246925	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	612	Open in IMG/M
3300032782\|Ga0335082_11290437	Not Available	599	Open in IMG/M
3300032892\|Ga0335081_11208780	Not Available	861	Open in IMG/M
3300034818\|Ga0373950_0143478	Not Available	542	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	82.91%
Host-Associated	Host-Associated	16.24%
Engineered	Engineered	0.85%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	76.92%
Plants	Host-Associated → Plants	15.38%
Aquatic	Environmental → Aquatic	5.98%
Fungi	Host-Associated → Fungi	0.85%
Solid Waste	Engineered → Solid Waste	0.85%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	74.36%
Rhizosphere	Host-Associated → Plants → Rhizosphere	11.11%
Rhizoplane	Host-Associated → Plants → Rhizoplane	4.27%
Freshwater	Environmental → Aquatic → Freshwater	2.56%
Thermal Springs	Environmental → Aquatic → Thermal Springs	2.56%
Peat	Environmental → Terrestrial → Peat	2.56%
Sediment	Environmental → Aquatic → Sediment	0.85%
Mycelium	Host-Associated → Fungi → Mycelium	0.85%
Grass	Engineered → Solid Waste → Grass	0.85%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	53.85%
Loam	Environmental → Terrestrial → Soil → Loam	14.53%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	7.69%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	5.98%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	3.42%
Soil	Host-Associated → Plants → Rhizosphere → Soil	3.42%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	2.56%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	2.56%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	2.56%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.85%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.85%
Unclassified	Host-Associated → Fungi → Mycelium → Unclassified	0.85%
Composting	Engineered → Solid Waste → Grass → Composting	0.85%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	29.06%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	10.26%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	10.26%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	8.55%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	7.69%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	5.98%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	4.27%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	3.42%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	3.42%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	3.42%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	2.56%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	2.56%
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	1.71%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.71%
Unclassified	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Unclassified	0.85%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.85%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.85%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.85%
Unclassified	Host-Associated → Fungi → Mycelium → Unclassified → Unclassified	0.85%
Unclassified	Engineered → Solid Waste → Grass → Composting → Unclassified	0.85%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	15.38%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	6.84%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	6.84%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	5.13%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	4.27%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	4.27%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	3.42%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost	3.42%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	3.42%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	2.56%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	2.56%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	2.56%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	2.56%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	2.56%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	2.56%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	1.71%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	1.71%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.71%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	1.71%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	1.71%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	1.71%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	1.71%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	1.71%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	0.85%
Thermal Springs	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Unclassified → Thermal Springs	0.85%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	0.85%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.85%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.85%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	0.85%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.85%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.85%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.85%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	0.85%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.85%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.85%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.85%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.85%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.85%
Rhizosphere Soil	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere Soil	0.85%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere	0.85%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.85%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.85%
Attine Ant Fungus Gardens	Host-Associated → Fungi → Mycelium → Unclassified → Unclassified → Attine Ant Fungus Gardens	0.85%
Switchgrass, Maize And Mischanthus Litter	Engineered → Solid Waste → Grass → Composting → Unclassified → Switchgrass, Maize And Mischanthus Litter	0.85%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2170459017	Litter degradation ZMR4	Engineered	Open in IMG/M
3300000887	Permafrost active layer microbial communities from McGill Arctic Research Station, Canada - (A3-65cm-16A)- 1 week illumina	Environmental	Open in IMG/M
3300000955	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300001471	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O2	Environmental	Open in IMG/M
3300001661	Mediterranean Blodgett CA OM1_O3 (Mediterranean Blodgett coassembly)	Environmental	Open in IMG/M
3300001664	Permafrost active layer microbial communities from McGill Arctic Research Station, Canada - 5cm_reassembled	Environmental	Open in IMG/M
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300004082	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3	Environmental	Open in IMG/M
3300004156	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1	Environmental	Open in IMG/M
3300005175	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122	Environmental	Open in IMG/M
3300005184	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_120	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005335	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG	Host-Associated	Open in IMG/M
3300005338	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2	Host-Associated	Open in IMG/M
3300005343	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG	Environmental	Open in IMG/M
3300005438	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG	Environmental	Open in IMG/M
3300005458	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG	Environmental	Open in IMG/M
3300005529	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen16_06102014_R1	Environmental	Open in IMG/M
3300005537	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen01_05102014_R1	Environmental	Open in IMG/M
3300005541	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1	Environmental	Open in IMG/M
3300005542	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1	Environmental	Open in IMG/M
3300005554	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110	Environmental	Open in IMG/M
3300005564	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG	Host-Associated	Open in IMG/M
3300005834	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2	Host-Associated	Open in IMG/M
3300005921	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300007982	Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPM 11 metaG	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009521	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_9_AC metaG	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300010375	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG	Host-Associated	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental	Open in IMG/M
3300011425	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT244_2	Environmental	Open in IMG/M
3300011999	Permafrost microbial communities from Nunavut, Canada - A28_65cm_6M	Environmental	Open in IMG/M
3300012176	Attine ant fungus gardens microbial communities from New Jersey, USA - TSNJ036 MetaG	Host-Associated	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012357	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaG	Environmental	Open in IMG/M
3300012360	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_113_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012685	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaG	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012988	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_242_MG	Environmental	Open in IMG/M
3300013503	Permafrost microbial communities from Nunavut, Canada - A23_5cm_12M	Environmental	Open in IMG/M
3300014169	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin11_10_metaG	Environmental	Open in IMG/M
3300014497	Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG	Host-Associated	Open in IMG/M
3300015245	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015265	Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-103_1 MetaG	Host-Associated	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300017972	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300017975	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018058	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_20_MG	Environmental	Open in IMG/M
3300018088	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_10_MG	Environmental	Open in IMG/M
3300018431	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300018469	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 T	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300019879	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2m2	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021358	Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3	Host-Associated	Open in IMG/M
3300021401	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-O	Environmental	Open in IMG/M
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental	Open in IMG/M
3300021433	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-O	Environmental	Open in IMG/M
3300021441	Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1	Host-Associated	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300022557	Paint Pots_combined assembly	Environmental	Open in IMG/M
3300024227	Spruce rhizosphere microbial communities from Bohemian Forest, Czech Republic - CZU4	Host-Associated	Open in IMG/M
3300025157	Hot spring microbial communities from Beatty, Nevada to study Microbial Dark Matter (Phase II) - OV2 TP3 (SPAdes)	Environmental	Open in IMG/M
3300025664	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 53-3 deep-072012 (SPAdes)	Environmental	Open in IMG/M
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025961	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026023	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026305	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_142 (SPAdes)	Environmental	Open in IMG/M
3300026537	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135 (SPAdes)	Environmental	Open in IMG/M
3300027381	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA Ref_M2 (SPAdes)	Environmental	Open in IMG/M
3300027388	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM2_O2 (SPAdes)	Environmental	Open in IMG/M
3300027565	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM1_M1 (SPAdes)	Environmental	Open in IMG/M
3300027610	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M3 (SPAdes)	Environmental	Open in IMG/M
3300027706	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen15_06102014_R2 (SPAdes)	Environmental	Open in IMG/M
3300027725	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200 (SPAdes)	Environmental	Open in IMG/M
3300027862	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027882	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027986	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen07_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300028047	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300028801	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E3_3	Environmental	Open in IMG/M
3300028906	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)	Environmental	Open in IMG/M
3300030494	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_3_AS metaG (v2)	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031234	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_2	Environmental	Open in IMG/M
3300031236	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_1	Environmental	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031595	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG	Host-Associated	Open in IMG/M
3300031681	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f20	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031793	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f21	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300032782	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.1	Environmental	Open in IMG/M
3300032892	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.5	Environmental	Open in IMG/M
3300034818	Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_3	Host-Associated	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
4ZMR_03288070	2170459017	Switchgrass, Maize And Mischanthus Litter	LAAELRAGAFAECESRGRKARAILWRLTILKLREGNPGFLAENGFGE
AL16A1W_102790991	3300000887	Permafrost	RCGAFDACEMRGRAARAILWRMTMMKLREGNPHFLAQNGFG*
JGI1027J12803_1015619672	3300000955	Soil	RLALDLRNGAFETCPSQESAARAILWRLAIARLREANPQFLVANGFD*
JGI12712J15308_101846222	3300001471	Forest Soil	DLRNGAFETSPSRAAAARAILWRLTIEKLREGNPHFLAANGFRKAGRQST*
JGI12053J15887_101299841	3300001661	Forest Soil	DPLIRRFALDLRNGAFETYPSQERAARAILWRLTIARLREANPQFLAANGFG*
P5cmW16_10313631	3300001664	Permafrost	PLLHRLAADLRCGAFDACEMRGRAARAILWRMTMMKLREGNPHFLAQNGFG*
JGIcombinedJ26739_1006587151	3300002245	Forest Soil	GGEGDFGDDLLGRFAADLRNGAFETSEPRQRAARAILWRMTIARLRMGNPDFLAANGFA*
Ga0062384_1009591271	3300004082	Bog Forest Soil	FAADLRNGAFETSPSRAAAARAILWRLTIEKLREGNPQFLAANRLSDAGRQGQ*
Ga0062384_1014449671	3300004082	Bog Forest Soil	ADLRNGAFETSRSRLAAARAILWRLTIEKLREGNPHFLAANGLQRAGRQST*
Ga0062589_1027466762	3300004156	Soil	IGAFEACEARARDARAILWRLTMLKLREGNPRFLARNGFGE*
Ga0066673_108848812	3300005175	Soil	GPADRLLRRFALDLRNGAFETCPSQECAARVILWRMTIARLREANPHFLAAHGFE*
Ga0066671_106111211	3300005184	Soil	LRRFALDLRNGAFETCPSQECAARVILWRMTIARLREANPHFLAAHGFE*
Ga0066388_1047413071	3300005332	Tropical Forest Soil	RFARDLRNGAFETSPSREEAARAILWRPTIARLSEANPQFLAAHGIA*
Ga0070666_106296092	3300005335	Switchgrass Rhizosphere	LLARFADEQRIGAFEACEARDRDARALLWRLTMLKLREGNPGFLARNGFGE*
Ga0068868_1012362672	3300005338	Miscanthus Rhizosphere	LFARDLRVGAFEACEARGRAACAILWRLTILKLREGNPGFLARNGFGA*
Ga0070687_1011106191	3300005343	Switchgrass Rhizosphere	SLLSRLAADLRNGAFETTPSREAAARAILWRMVIAKLRETNPQFLAANGIGPAESES*
Ga0070701_106652771	3300005438	Corn, Switchgrass And Miscanthus Rhizosphere	DLRRLAADLRIGAFDRCESRGRKARAILWRLTILKLSEGNPGFLAENGFGE*
Ga0070681_106748352	3300005458	Corn Rhizosphere	DLRVGAFEACEARGRAARAILWRLTILKLREGNPGFLARNGFGA*
Ga0070741_112800161	3300005529	Surface Soil	SLARLAADLRRGEFETSLSRERAARAILWRLTILKLREANPQFLAAHGIV*
Ga0070730_106441821	3300005537	Surface Soil	LLRRLAADLRAGAFEQCEARAAAARAVLWRLTILKLREGNPQFLAANGFAE*
Ga0070733_102302621	3300005541	Surface Soil	LRRFATDLRAGAFERCETRQRAALAILWRLTMMKLREGNPQFLAANGFGE*
Ga0070732_106958282	3300005542	Surface Soil	GAFETSPSREKAARAILWRLTIARLREGNPHFLTVNGFRSVDGKGE*
Ga0066661_106448301	3300005554	Soil	SGIPHLTPALSAPGGGEGVSADWLLRHFAADLRNGAFETSEPRQRAARAILWRMTVARLRAGNPDFLAANGFA*
Ga0070664_1011407702	3300005564	Corn Rhizosphere	DLRNGAFETCPSQECAARVILWRIAIARLREANPYFLATHGFA*
Ga0068851_109820681	3300005834	Corn Rhizosphere	GAFEACEARDNDARAILWRLTLLKLREGNPGFLARNGFGA*
Ga0070766_109067012	3300005921	Soil	DLLRRFITDLRNGAFETSPSRAAAARAILWRLTIAKLREGNPQFLAANGFGRAGGKGE*
Ga0070765_1000397846	3300006176	Soil	AADLRNGAFETSPSRMAAARAILWRLTIEKLREGNPHFLAANGFPAGDKDG*
Ga0075425_1011141571	3300006854	Populus Rhizosphere	ASDLRAGRFDACVNRRQAARAILWRSTMMKLREGNPHFLAENGFGD*
Ga0102924_12814061	3300007982	Iron-Sulfur Acid Spring	FAADLRGGAFAASESQDRAARAILWRLTIAKLREGNPRFLAANGFR*
Ga0099829_110493791	3300009038	Vadose Zone Soil	AFEACEARAAAVRAILWRLTIGKLREGNPLFLAANGFGE*
Ga0099828_116516111	3300009089	Vadose Zone Soil	RMGAFERCDRRGRAARAILWQLTILKLREGNPQFLAENDFGE*
Ga0099827_107422842	3300009090	Vadose Zone Soil	LRRLAADLRAGAFEACEARAAAARAILWRLTIGKLREGNPLFLAANGFGE*
Ga0111539_119085732	3300009094	Populus Rhizosphere	GDLRVGAFEPCEARGRAARAILWRLTILKLREGNPGFLARNGFGA*
Ga0066709_1012418012	3300009137	Grasslands Soil	LLRRFALDLRMGAFERCDRRGRAARAILWQLTILKLREGNPQFLADNGFGE*
Ga0116222_11563992	3300009521	Peatlands Soil	DLRNGAFETSPSRGKAARAILWRLTIEKLREGNPHFLAANGFIRAGLKGE*
Ga0126373_105935541	3300010048	Tropical Forest Soil	LRRLAADLRNGAFETSPSREAAARAILWRLTSEKLREGNPQFLAANRLGNAGGRDR*
Ga0134128_105455412	3300010373	Terrestrial Soil	PGLDTLLRRFAGDLRAGAFEACEGRAEAARAILWRLTISRLREGNPSFLADNGFGA*
Ga0105239_133972792	3300010375	Corn Rhizosphere	LLSRLAADLRNGAFETTPSREAAARAILWRMVIAKLRETNPQFLAANGIGPAESES*
Ga0134122_116781161	3300010400	Terrestrial Soil	IGAFDRCGSRGRIAHAILWRLTILKLREGNPGFLAENGFGE*
Ga0137392_111216351	3300011269	Vadose Zone Soil	LAADLRADAFKACEAREAAASAILWRLTILKLREGNPLFLAANGFGD*
Ga0137441_11255422	3300011425	Soil	QGGEGDLAHLLRRLACDLRGGAFDACEARGRAARAILWRLTMMKLREGNPHFLAANGFGE
Ga0120148_10217171	3300011999	Permafrost	QREGEGLICADDIVLLRRLAADLRCGAFDACEMRGRAARAILWRMTMMKLREGNPHFLAQNGFG*
Ga0153952_11482862	3300012176	Attine Ant Fungus Gardens	LLARLAADLRNGAFETSPSRAAAARAILWRLTIGKLGEGNPHFLAANGIKAGRHGT*
Ga0137376_112118751	3300012208	Vadose Zone Soil	GDGLLRRFAGDLRNGAFETSGPRERAARAILWRMTVARLRAGNPDFLAANGFA*
Ga0137378_106706801	3300012210	Vadose Zone Soil	RFAIDLRNGAFETCPSQECAARVILWRMTIARLREANPHFLAAHGFE*
Ga0137378_109596512	3300012210	Vadose Zone Soil	LTELLRRLAADLRMGAFERCDRRGRAARAILWRLTILKLREGNPQFLAENGFGE*
Ga0137378_113971881	3300012210	Vadose Zone Soil	LLGCFAADLRMGAFERCDRRGRAARAILWQLTIMKLREGNPQFLADNGFGE*
Ga0137384_107831172	3300012357	Vadose Zone Soil	GFTADLRVGAFEACKPRAAAARAILWRLTMMKLREGNPQFLADNGFGE*
Ga0137375_106732282	3300012360	Vadose Zone Soil	AGDTLLRDFAADLRNGAFETSGPRERAARAILWRMTIARLRVGNPDFLAANGFA*
Ga0137360_108622141	3300012361	Vadose Zone Soil	LRMGAFERCDRRVRAARAILWQLTILKLREGNPQFLAANGFGE*
Ga0137397_109532182	3300012685	Vadose Zone Soil	LLRRFAADLRMGAFERCDRRERAARAILWRLTILKQREGNPQFLAENGFGE*
Ga0137359_112207941	3300012923	Vadose Zone Soil	MAGGEGDRLLHRFAADLRMGAFERCDRRGRAARAILWRLTILKLREGNPQFLAENGFGE*
Ga0137404_112370371	3300012929	Vadose Zone Soil	GPNDTTLDRFAADLRAGAFEACEARGQAARAILWRLTMLKLREGNPSFLAANGFGE*
Ga0137407_123601741	3300012930	Vadose Zone Soil	DLRMGAFERCDRRGRAARAILWRLTILKLREGNPQFLAENGFGE*
Ga0164306_102020702	3300012988	Soil	RIGAFDRCDSRVRIARAILWRLTILKLREGNPGFLAENGFGE*
Ga0120127_100983671	3300013503	Permafrost	LLHRLAADLRCGAFDACEMRGRAARAILWRMTMMKLREGNPHFLAQNGFG*
Ga0181531_100786233	3300014169	Bog	AADLRNGAFETSPSRAAAARAILWWLTIEKLREGNPQFLAANGISDASGQNK*
Ga0182008_105216872	3300014497	Rhizosphere	EDDLRRLAGDLRIGAFERCGSRGRKARAILWRLTILKLREGNPGFLAENGFGE*
Ga0137409_101149513	3300015245	Vadose Zone Soil	LSRLAADLRNGAFETCPSRESAARVILWQLVAAKLREANPQFLAANSFA*
Ga0182005_12278931	3300015265	Rhizosphere	GLLHRFAAELRAGAFDRCDSRGQKARAILWRVTILKLREGNPGFLAENGFGE*
Ga0132258_105809621	3300015371	Arabidopsis Rhizosphere	ADLRNGAFETTPSREAAARAILWRMVIAKLRETNPQFLAANGIGPAESES*
Ga0182040_106043311	3300016387	Soil	LSSVALLRRFANDLRVGAFEHSPLDGAARAILWRMTIAGLRRSNPNFLAANGFE
Ga0187781_108206062	3300017972	Tropical Peatland	FDREGETLRRFALDLRNGAFENSRSRAAAACTILWRMTIAKLREGNPGFLAANGFDGS
Ga0187782_109250342	3300017975	Tropical Peatland	RLARDLRAGAFETCEARGRAGRAILWRLTILKLREGNPQFLAANGFGE
Ga0187766_111433122	3300018058	Tropical Peatland	LAADLRAGAFEPCEVREPAARAILWRLTISKLREGNPQFLAANGFGV
Ga0187771_103468681	3300018088	Tropical Peatland	AFEACEARGRDARAILWRLTMLKSREGNPLFLAENGFGE
Ga0066655_112660592	3300018431	Grasslands Soil	RMGAFERCDRRGPAARAILWRLTILKLREGNPQFLAENGFGE
Ga0066667_121550132	3300018433	Grasslands Soil	CPEGPGDALLRRLALDLRNGAFETCPSHESAARAILWRLTMARLRAANPQFLAANGFG
Ga0190270_118499531	3300018469	Soil	RLGGDLRFGAFEACEARGWAARAVLWRLTMLKLREGNPSFLARNGFGA
Ga0066669_102990661	3300018482	Grasslands Soil	RGPADRLLRRFALDLRNGAFETCPSQECAARVILWRMTIARLREANPYFLAAHGFK
Ga0066669_114118502	3300018482	Grasslands Soil	RFALDLRNGAFETCPSHESAARAILWRLTIARLRAANPQFLAANGFD
Ga0193723_11527771	3300019879	Soil	AFEACEAREADARAILWRLTIVKLREGNPLFLAANGFGE
Ga0210403_114133282	3300020580	Soil	ISAPGGGEGDGEGLIRRFALDLRNGAFETYPSQERAARAILWRLTIARLREANPQFLAANGFG
Ga0210405_106497111	3300021171	Soil	LAADLRNGAFETSPSRAGAARAILWRLTIAKLREGNPHFLAANGFTQAGLRGE
Ga0213873_100976561	3300021358	Rhizosphere	GTFETFGSRNQAARAILWRLTIARLRQTNPKYLAANGFD
Ga0210393_103458822	3300021401	Soil	SADLHHFAADLRNGAFETSPSRAAAARAILWRLTIEKLREGNPHFLAANGFRKAGRQST
Ga0210394_115009452	3300021420	Soil	LSAPGGGEGDTDDDLLRHFAADLRNGAFETSEPRQHAARAILWRMTIARLRMGNPDFLAANGFA
Ga0210391_102824431	3300021433	Soil	PHFLARFAADLRNGAFETSPSRENAARAILWRLTIEKLREGNPHFLAANGFGAGRRST
Ga0213871_101773702	3300021441	Rhizosphere	REERENVMARFAADLRNGGFETSPSQQTAARAILWRLTIDKLREGNPHFLAANGIGAGRRST
Ga0126371_106909082	3300021560	Tropical Forest Soil	RFAADLRNGAFETSPSRETAARAILWRLTIGKLREGNPRFLVANGLKAGRRDT
Ga0212123_106101932	3300022557	Iron-Sulfur Acid Spring	FAADLRGGAFAASESQDRAARAILWRLTIAKLREGNPRFLAANGFR
Ga0228598_10268881	3300024227	Rhizosphere	CELRNGAFENSPNRDTRARAILWRMTIARLRLANPKFLAANGFF
Ga0209399_100670132	3300025157	Thermal Springs	LAADARLLLARLAADLRTGAFESCTARAAAARAILWRLTIVKLREGNPLFLAANGFGE
Ga0208849_10197683	3300025664	Arctic Peat Soil	QSSGLLARFAADLRNGAFETSRSRERAARAILWRLTIEKLREGNPHFLAANGFHDADGQE
Ga0207693_110536241	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	FALDLRNGAFETYPSQERTARAILWRLTIARLREANPQFLAANGFG
Ga0207712_120332651	3300025961	Switchgrass Rhizosphere	LRRLAADLRIGAFDRCESRGRKARAILWRLTILKLSEGNPGFLAENGFGE
Ga0207677_103550461	3300026023	Miscanthus Rhizosphere	QDAGAPTTGLFARDLRVGAFEACEARGRAACAILWRLTILKLREGNPGFLARNGFGA
Ga0207677_113580092	3300026023	Miscanthus Rhizosphere	AFEACVARDRDARPLLWRLTMLKLREGNPGFLARNGFGE
Ga0209688_10662742	3300026305	Soil	LRNGAFETCLSQERAARAILWRLTMARLRAANPQFLAANGFD
Ga0209157_13748171	3300026537	Soil	RLAAALRIGAFELCEARERAARAILWHLTIVKLREGNPEFLAANGFGD
Ga0208983_10821612	3300027381	Forest Soil	PDDTLIRRFALDLRNGAFETYPSQERAARAILWRLTIARLREANPQFLAANGFG
Ga0208995_10232561	3300027388	Forest Soil	TLIRRFALDLRNGAFETYPSQERAARAILWRLTIARLREANPQFLAANGFG
Ga0209219_10419731	3300027565	Forest Soil	FYQCAPDDNLLRRFATDLRNGAFETSEPRERAARAILWRMTIARLRMGNPDFLAANGFA
Ga0209528_10480842	3300027610	Forest Soil	PALSAPGGGEGDFGDDLLGRFAADLRNGAFETSEPRERAARAILWRMTIARLRMGNPDFLAANGFA
Ga0209581_11740772	3300027706	Surface Soil	AGPGVGPLLRRLAADLRVGAFESCAARAGLARAILWRLTISKLRASNPQFLAANGVGE
Ga0209178_13675501	3300027725	Agricultural Soil	EGLRRFALDLRNGAFETCPSQECAARVILWRIAIARLREANPYFLATHGFA
Ga0209701_100718513	3300027862	Vadose Zone Soil	RFAADLRMGAFERCDRRGRAARAILWPLTIMKLREGNPQFLAENGFGE
Ga0209590_103354972	3300027882	Vadose Zone Soil	EGDLGRLLRRFAADLRMGAFERCDRRGRAARAILWPLTIMKLREGNPQFLAENGFGE
Ga0209168_106342172	3300027986	Surface Soil	GEASLARLAADLRRGEFETSLSRERAARAILWRLTILKLREANPQFLAAHGIV
Ga0209526_102108282	3300028047	Forest Soil	PTLSAPKGGEGDTDGDRLRRFAADLRNGAFETSEPRQRAARAILWRMTIARLRMGNPDFLAANGIA
Ga0302226_104076132	3300028801	Palsa	DLARFAADLRNGAFETSPSRAAAARAILWRLTIEKLREGNPQFLAANGLSDAGRQGQ
Ga0308309_107583271	3300028906	Soil	RDLRNGAFETSEPRQRAARAILWRMTIARLRMGNPDFLAANGFA
Ga0310037_102781161	3300030494	Peatlands Soil	ADLRNGAFETSPSRGKAARAILWRLTIEKLREGNPHFLAANGFIRAGLKGE
Ga0170824_1114694622	3300031231	Forest Soil	FALDLRNGAFETYPSQERAARAILWRLTIARLREANPQFLAANGFG
Ga0302325_131037371	3300031234	Palsa	LLDHFAADLRNGGFETSPSRAAAARAILWRLTIEKLREGNPRFLAANGFGDDAGRQDE
Ga0302324_1004984003	3300031236	Palsa	ARFAADLRNGAFETSPSRAAAARAILWRLTIEKLREGNPQFLAANGLSDAGRQGQ
Ga0318516_105788922	3300031543	Soil	GEGEPALWRRFAWDLRNGAFEHSPLDRAARAILWRMTIAGLRRSNPNFLAANGFD
Ga0265313_103474712	3300031595	Rhizosphere	LRRFAADLRNGAFENSPSRSAAARAILWRLTIAKLRENNPHFLAANGIAEAGERGE
Ga0318572_107708291	3300031681	Soil	RRFAADLRIGAFANSPDREAQARALLWRLTIVRLRLANPRFLAANGFARGDGPGDRNYVP
Ga0310686_1037445202	3300031708	Soil	LAADLRNGAFETSPSRAAASRAILWRLTIEKLREANPQFLVANGFRNAGRQST
Ga0318548_102520572	3300031793	Soil	TELWRRFAWDLRVGAFEHSPLDRAARAILWRMTIAGLRRSNPNFLAANGFD
Ga0306923_114242611	3300031910	Soil	FAWDLRNGAFEHSPLDRAARAILWRMTIAGLRRSNPNYLAANGLD
Ga0306921_127288601	3300031912	Soil	RKGAFETTRSRELAARAILWRLVLAKLREGNPQFLAANGFE
Ga0335082_112469251	3300032782	Soil	ADHGEPETLLRRFAADLRAGAFEPCEARAAAARAILWRLTILKLREGNPLFLAENGFGG
Ga0335082_112904372	3300032782	Soil	GLGWLLARFADDLRAGAFENCDGRGRAARAILWWLTIAKLREGNPQFLAENGFGE
Ga0335081_112087802	3300032892	Soil	DLRAGAFEPCEVRERAARAILWRLTISKLREGNPQFLAANGFGV
Ga0373950_0143478_5_148	3300034818	Rhizosphere Soil	LAADLRIGAFDRCESRGRKARAILWRLTILKLSEGNPGFLAENGFGE

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.72
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.72
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F077555

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Structural matches with SCOPe domains

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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