Metagenome Family F077468

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F077468
Family Type	Metagenome
Number of Sequences	117
Average Sequence Length	96 residues
Representative Sequence	MAIVTEISWDDMLDGKPLPETPARKAWREAVAEIAEKAKATLPECNGRVDKAVAIVLAGDVELLSDGKAKVASQSNGTTAYFVVNGEC
Number of Associated Samples	75
Number of Associated Scaffolds	117

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	90.60 %
% of genes near scaffold ends (potentially truncated)	82.91 %
% of genes from short scaffolds (< 2000 bps)	96.58 %
Associated GOLD sequencing projects	71
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.46

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (58.974 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere (31.624 % of family members)
Environment Ontology (ENVO)	Unclassified (31.624 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (67.521 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 35.34% β-sheet: 14.66% Coil/Unstructured: 50.00%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.46
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.46
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 117 Family Scaffolds
PF01381	HTH_3	23.08
PF12844	HTH_19	4.27
PF13560	HTH_31	4.27
PF08388	GIIM	0.85
PF02178	AT_hook	0.85

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.97 %
All Organisms	root	All Organisms	41.03 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.97 %
cellular organisms	root	All Organisms → cellular organisms	41.03 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.97 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	41.03 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.97 %
environmental samples	no rank	All Organisms → cellular organisms → Bacteria → environmental samples	33.33 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	2.56 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1.71 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.97 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	33.33 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	2.56 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.85 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.97 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	33.33 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	2.56 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.85 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.97 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	33.33 %
Myxococcales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	1.71 %
Streptomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales	0.85 %
Desulfuromonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfuromonadales	0.85 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.97 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	33.33 %
Nannocystineae	suborder	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Nannocystineae	1.71 %
Geobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfuromonadales → Geobacteraceae	0.85 %
Streptomycetaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	0.85 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.97 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	33.33 %
Kofleriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Nannocystineae → Kofleriaceae	1.71 %
Geobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfuromonadales → Geobacteraceae → Geobacter	0.85 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	0.85 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.97 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	33.33 %
Haliangium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Nannocystineae → Kofleriaceae → Haliangium	1.71 %
unclassified Geobacter	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfuromonadales → Geobacteraceae → Geobacter → unclassified Geobacter	0.85 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	0.85 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.97 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	33.33 %
Haliangium ochraceum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Nannocystineae → Kofleriaceae → Haliangium → Haliangium ochraceum	1.71 %
Geobacter sp. M21	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfuromonadales → Geobacteraceae → Geobacter → unclassified Geobacter → Geobacter sp. M21	0.85 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	0.85 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	0.85 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000364\|INPhiseqgaiiFebDRAFT_100290050	Not Available	589	Open in IMG/M
3300000955\|JGI1027J12803_104464352	Not Available	1627	Open in IMG/M
3300003911\|JGI25405J52794_10154202	Not Available	524	Open in IMG/M
3300005187\|Ga0066675_11417447	Not Available	509	Open in IMG/M
3300005294\|Ga0065705_10573741	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	724	Open in IMG/M
3300005294\|Ga0065705_10952543	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Nannocystineae → Kofleriaceae → Haliangium → Haliangium ochraceum	543	Open in IMG/M
3300005294\|Ga0065705_11155511	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	510	Open in IMG/M
3300005332\|Ga0066388_102720906	All Organisms → cellular organisms → Bacteria	903	Open in IMG/M
3300005332\|Ga0066388_103815996	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	769	Open in IMG/M
3300005332\|Ga0066388_104917735	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	679	Open in IMG/M
3300005332\|Ga0066388_107069308	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Nannocystineae → Kofleriaceae → Haliangium → Haliangium ochraceum	564	Open in IMG/M
3300005332\|Ga0066388_107727687	Not Available	539	Open in IMG/M
3300005332\|Ga0066388_108387258	Not Available	515	Open in IMG/M
3300005347\|Ga0070668_101667886	Not Available	585	Open in IMG/M
3300005440\|Ga0070705_101848120	Not Available	513	Open in IMG/M
3300005547\|Ga0070693_101345734	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	553	Open in IMG/M
3300005577\|Ga0068857_100811690	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	894	Open in IMG/M
3300005598\|Ga0066706_10545717	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	922	Open in IMG/M
3300005764\|Ga0066903_100948170	Not Available	1565	Open in IMG/M
3300005764\|Ga0066903_102243264	Not Available	1054	Open in IMG/M
3300005764\|Ga0066903_102537394	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	993	Open in IMG/M
3300005764\|Ga0066903_104096053	Not Available	781	Open in IMG/M
3300005764\|Ga0066903_106077512	Not Available	632	Open in IMG/M
3300005842\|Ga0068858_101962431	Not Available	578	Open in IMG/M
3300005842\|Ga0068858_102253286	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	538	Open in IMG/M
3300006196\|Ga0075422_10289767	Not Available	698	Open in IMG/M
3300006794\|Ga0066658_10573552	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	614	Open in IMG/M
3300006797\|Ga0066659_11124765	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	657	Open in IMG/M
3300006844\|Ga0075428_100296853	Not Available	1738	Open in IMG/M
3300006844\|Ga0075428_100617928	Not Available	1157	Open in IMG/M
3300006844\|Ga0075428_101602287	Not Available	681	Open in IMG/M
3300006845\|Ga0075421_100209748	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	2406	Open in IMG/M
3300006845\|Ga0075421_100483987	Not Available	1473	Open in IMG/M
3300006845\|Ga0075421_100915398	Not Available	999	Open in IMG/M
3300006845\|Ga0075421_101306868	Not Available	803	Open in IMG/M
3300006845\|Ga0075421_101987279	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	620	Open in IMG/M
3300006846\|Ga0075430_100603638	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	905	Open in IMG/M
3300006847\|Ga0075431_100609861	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	1075	Open in IMG/M
3300006847\|Ga0075431_101058198	Not Available	777	Open in IMG/M
3300006847\|Ga0075431_101141948	Not Available	743	Open in IMG/M
3300006847\|Ga0075431_101541265	Not Available	623	Open in IMG/M
3300006847\|Ga0075431_102108075	Not Available	519	Open in IMG/M
3300006853\|Ga0075420_100828870	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	796	Open in IMG/M
3300006853\|Ga0075420_101144841	Not Available	669	Open in IMG/M
3300006871\|Ga0075434_100772007	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	978	Open in IMG/M
3300006871\|Ga0075434_102181475	Not Available	558	Open in IMG/M
3300006880\|Ga0075429_100827452	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	811	Open in IMG/M
3300006904\|Ga0075424_101642093	Not Available	681	Open in IMG/M
3300006969\|Ga0075419_11054479	Not Available	594	Open in IMG/M
3300007076\|Ga0075435_101963376	Not Available	514	Open in IMG/M
3300009012\|Ga0066710_101645173	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	981	Open in IMG/M
3300009012\|Ga0066710_102021395	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	853	Open in IMG/M
3300009038\|Ga0099829_11498416	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	557	Open in IMG/M
3300009088\|Ga0099830_11521262	Not Available	557	Open in IMG/M
3300009089\|Ga0099828_10818193	Not Available	834	Open in IMG/M
3300009094\|Ga0111539_11236994	Not Available	867	Open in IMG/M
3300009100\|Ga0075418_12038834	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	625	Open in IMG/M
3300009101\|Ga0105247_11170336	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	611	Open in IMG/M
3300009137\|Ga0066709_104578607	Not Available	505	Open in IMG/M
3300009147\|Ga0114129_10127567	All Organisms → cellular organisms → Bacteria	3497	Open in IMG/M
3300009147\|Ga0114129_10194032	All Organisms → cellular organisms → Bacteria	2755	Open in IMG/M
3300009147\|Ga0114129_10486683	All Organisms → cellular organisms → Bacteria	1613	Open in IMG/M
3300009147\|Ga0114129_12017542	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	697	Open in IMG/M
3300009147\|Ga0114129_12047480	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	691	Open in IMG/M
3300009156\|Ga0111538_11561212	Not Available	832	Open in IMG/M
3300009162\|Ga0075423_11022531	Not Available	878	Open in IMG/M
3300009162\|Ga0075423_11197070	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	811	Open in IMG/M
3300009792\|Ga0126374_11009641	Not Available	653	Open in IMG/M
3300010043\|Ga0126380_11082207	Not Available	682	Open in IMG/M
3300010046\|Ga0126384_10532570	Not Available	1018	Open in IMG/M
3300010047\|Ga0126382_11582728	Not Available	607	Open in IMG/M
3300010047\|Ga0126382_11703405	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	589	Open in IMG/M
3300010047\|Ga0126382_11826374	Not Available	572	Open in IMG/M
3300010047\|Ga0126382_11894737	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	564	Open in IMG/M
3300010359\|Ga0126376_11757384	Not Available	657	Open in IMG/M
3300010359\|Ga0126376_12747382	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	542	Open in IMG/M
3300010360\|Ga0126372_12700018	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	548	Open in IMG/M
3300010362\|Ga0126377_12796820	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	562	Open in IMG/M
3300010398\|Ga0126383_10611325	Not Available	1162	Open in IMG/M
3300010398\|Ga0126383_11493673	Not Available	765	Open in IMG/M
3300010398\|Ga0126383_13473348	Not Available	515	Open in IMG/M
3300011270\|Ga0137391_11286156	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	578	Open in IMG/M
3300012096\|Ga0137389_10631250	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	921	Open in IMG/M
3300012189\|Ga0137388_10999082	Not Available	772	Open in IMG/M
3300012201\|Ga0137365_10647577	Not Available	773	Open in IMG/M
3300012203\|Ga0137399_11663773	Not Available	526	Open in IMG/M
3300012209\|Ga0137379_10906400	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	786	Open in IMG/M
3300012349\|Ga0137387_10345830	Not Available	1077	Open in IMG/M
3300012349\|Ga0137387_10373860	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	1032	Open in IMG/M
3300012349\|Ga0137387_11029516	Not Available	589	Open in IMG/M
3300012351\|Ga0137386_10023355	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	4191	Open in IMG/M
3300012357\|Ga0137384_11007536	Not Available	670	Open in IMG/M
3300012360\|Ga0137375_10840825	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	734	Open in IMG/M
3300012362\|Ga0137361_11731496	Not Available	544	Open in IMG/M
3300012363\|Ga0137390_11335391	Not Available	662	Open in IMG/M
3300012917\|Ga0137395_10888307	Not Available	645	Open in IMG/M
3300012925\|Ga0137419_11257026	Not Available	621	Open in IMG/M
3300012944\|Ga0137410_10647549	Not Available	877	Open in IMG/M
3300012948\|Ga0126375_10828114	Not Available	736	Open in IMG/M
3300013306\|Ga0163162_12462163	Not Available	598	Open in IMG/M
3300013306\|Ga0163162_13062644	Not Available	537	Open in IMG/M
3300014745\|Ga0157377_11109070	Not Available	607	Open in IMG/M
3300014968\|Ga0157379_10730875	Not Available	931	Open in IMG/M
3300014968\|Ga0157379_11361528	Not Available	687	Open in IMG/M
3300016357\|Ga0182032_11276924	Not Available	633	Open in IMG/M
3300017792\|Ga0163161_10813882	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	786	Open in IMG/M
3300017997\|Ga0184610_1099435	Not Available	921	Open in IMG/M
3300025910\|Ga0207684_10235164	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfuromonadales → Geobacteraceae → Geobacter → unclassified Geobacter → Geobacter sp. M21	1581	Open in IMG/M
3300025961\|Ga0207712_11362392	Not Available	635	Open in IMG/M
3300026023\|Ga0207677_10848876	Not Available	820	Open in IMG/M
3300026035\|Ga0207703_11747476	Not Available	598	Open in IMG/M
3300026118\|Ga0207675_100611548	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	1093	Open in IMG/M
3300027873\|Ga0209814_10375480	Not Available	624	Open in IMG/M
3300027873\|Ga0209814_10423058	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	587	Open in IMG/M
3300027909\|Ga0209382_10891334	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	938	Open in IMG/M
3300027909\|Ga0209382_12344746	Not Available	500	Open in IMG/M
3300031740\|Ga0307468_101778708	Not Available	583	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	54.70%
Host-Associated	Host-Associated	45.30%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	53.85%
Plants	Host-Associated → Plants	45.30%
Aquatic	Environmental → Aquatic	0.85%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	53.85%
Rhizosphere	Host-Associated → Plants → Rhizosphere	36.75%
Rhizoplane	Host-Associated → Plants → Rhizoplane	8.55%
Sediment	Environmental → Aquatic → Sediment	0.85%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	41.88%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	35.90%
Loam	Environmental → Terrestrial → Soil → Loam	11.97%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	8.55%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.85%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.85%

Habitat	Taxonomy	Distribution
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	35.90%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	32.48%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	9.40%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	8.55%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	7.69%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	2.56%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	1.71%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.85%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.85%

Habitat	Taxonomy	Distribution
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	31.62%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	17.09%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	12.82%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	9.40%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	5.13%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	3.42%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere	2.56%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	2.56%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.56%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	2.56%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	1.71%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	1.71%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.85%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.85%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.85%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.85%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	0.85%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.85%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.85%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.85%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000955	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300003911	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1	Host-Associated	Open in IMG/M
3300005187	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124	Environmental	Open in IMG/M
3300005294	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk Soil	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005347	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG	Host-Associated	Open in IMG/M
3300005440	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG	Environmental	Open in IMG/M
3300005547	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG	Environmental	Open in IMG/M
3300005577	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2	Host-Associated	Open in IMG/M
3300005598	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005842	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2	Host-Associated	Open in IMG/M
3300006196	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1	Host-Associated	Open in IMG/M
3300006794	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107	Environmental	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006845	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5	Host-Associated	Open in IMG/M
3300006846	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4	Host-Associated	Open in IMG/M
3300006847	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5	Host-Associated	Open in IMG/M
3300006853	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD4	Host-Associated	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300006880	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3	Host-Associated	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300006969	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3	Host-Associated	Open in IMG/M
3300007076	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4	Host-Associated	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009088	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG	Environmental	Open in IMG/M
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009101	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG	Host-Associated	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300011270	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaG	Environmental	Open in IMG/M
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012201	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012349	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaG	Environmental	Open in IMG/M
3300012351	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_100_16 metaG	Environmental	Open in IMG/M
3300012357	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaG	Environmental	Open in IMG/M
3300012360	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_113_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012363	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaG	Environmental	Open in IMG/M
3300012917	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaG	Environmental	Open in IMG/M
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012944	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300014745	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG	Host-Associated	Open in IMG/M
3300014968	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG	Host-Associated	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300017792	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG	Host-Associated	Open in IMG/M
3300017997	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_100_coex	Environmental	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025961	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026023	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026035	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026118	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300027873	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1 (SPAdes)	Host-Associated	Open in IMG/M
3300027909	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)	Host-Associated	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
INPhiseqgaiiFebDRAFT_1002900501	3300000364	Soil	GKPLPEPPARQAWRDAVTEIADKAKARLPECGGRVDAAVKITLAGDVELQADGTAKVAGQSNGATAYHIVNGPYSTPRFRQGTISAL*
JGI1027J12803_1044643521	3300000955	Soil	MAIVTEISWDDMLDGKPLPEPPARQAWRDAVTEIADKAKARLPECGGRVDAAVKITLAGDVELQADGTAKVAGQSNGATAYHIVNGPYSTPRFRQGTISAL*
JGI25405J52794_101542022	3300003911	Tabebuia Heterophylla Rhizosphere	MAIVTEISWDDMLDGKPLPETPAHMAWRDAVAEIAEKAKATLPACNGRVDKAVAIVLNGDVELLPDGKAKVASQSNGTTQYFVVNGTCECKDFPTAPSGWCKHRI
Ga0066675_114174471	3300005187	Soil	MNSVTEISWDDMWSGKPLPESPARKAYREAVGEIAEKAKQTLPDCIGRVDSAVKIVLHGDVELLQDGTAKVASQSNGTTRYFVVNG
Ga0065705_105737411	3300005294	Switchgrass Rhizosphere	MAIVTEISWDDMLDGKPLPETPARKAWREAVAEIAERAKATLPACNGRVDKAVAIVLAGDVELLPDGKAKVASQSNGTTQYFVVNGECSCPDFTKAPSHWCKHRIAAGLAKRAYPL
Ga0065705_109525431	3300005294	Switchgrass Rhizosphere	MAIVTEISWDDMLDGKPLPETPARKAWREAVAEIAEKAKATLPECNGRVDKAVAIVLAGDVELLPDGKAKVAGQSNGTTQYFVVNGECSCPDFPKAPSHWCKHRIAAGLAKRAYPLAKAKLEAATAS
Ga0065705_111555111	3300005294	Switchgrass Rhizosphere	MAIVTEISWDDMLDGKPLPETPARQAWREAVAEIADKAKAKLPECSGRVESAVKIVLAGDVALQADGTAKVASQSNGSTAYQVVNGHCNCQDFAKAPHQFCKHRV*
Ga0066388_1027209061	3300005332	Tropical Forest Soil	MAIVTELSWEDILDGKALPETPARQAWRAAVAEIADKARTKLPECSGRVDSAVKIVLAGDVELLAD
Ga0066388_1038159961	3300005332	Tropical Forest Soil	MSIVTEISWDDMWSGKSLPESPARKAFRESVAEIAEKAKATLPECNGRVDSAIKIVLNGDVELLPDGTAKIASQSNGTTKYFIVNGECSCKDYPKAPSHWCKHRI
Ga0066388_1049177351	3300005332	Tropical Forest Soil	MSIVAQFSWDDIADPAFENPTRKIWRDAVAEIAEKAKTTLPACNGRVDAATRIVLGGDVELLPDGTAKVASQSNGTTKYFIVNGECECKDYPKAPSHWCKHRIAAGLAKRASALTKQRLE
Ga0066388_1070693081	3300005332	Tropical Forest Soil	MAIVTEISWDDMLEGKPLPETSARKAWRDAVSEIAEKAKATLPACNGRVDKAVALVLAGDVELLPDGKAKVASQSNGTTQYFVVTGECSCPDFTQAPSHWCKHRIAAGL
Ga0066388_1077276872	3300005332	Tropical Forest Soil	MAIVSEISWDDMLDGKPLPETPARQAWREAVAEIADTAKARLPECNGRVDAAVKIVLAGDVELLADGTARVASQSNGTTTYQVVNGTCTCRDFERAPGQL
Ga0066388_1083872581	3300005332	Tropical Forest Soil	MAIVTEISWDDMLDGTPLPETPARQAWRAAVAEIADTARARLPECSGRVDAAVKIVLAGDVELLADGTAKVASQSNGSAVYHIAHGQCDCRDFERAPGQLCKHR*
Ga0070668_1016678862	3300005347	Switchgrass Rhizosphere	MAIVTEISWNDMFAGKALPDSPARTAFREAVAEIAEKAKQTLPDCIGRVDSAVKIVLNGDVELLQDGTARVAS
Ga0070705_1018481202	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	MAIVTEISWDDMLDGKPLPETPARKAWRDAVSEIAEKAKVTLPECNGRVDKAVALVLAGDVEILPDGKAKVASQSNGTSAYFVVNGECQCKDFPKA
Ga0070693_1013457342	3300005547	Corn, Switchgrass And Miscanthus Rhizosphere	MAIVTEISWDDMLDGKPLPETPARKAWRDAVSEIAEKAKVTLPECNGRVDKAVAIVLAGDVELLPDGKAKVASQSNGTSAYFVVNGECQCKDFPKASSGWCKHRIAAGMHKRAS
Ga0068857_1008116901	3300005577	Corn Rhizosphere	MAIVTEISWDDMLDGKPLPEPPARKAWRDAVSEIAERAKVTLPECNGRVDKAVAIVLAGDVELLPDGKAKVASQSNGTTAYFVVNGECQCKDFPKASSGWCKHRIAAGMHKRASVLA
Ga0066706_105457172	3300005598	Soil	MAMVTEISWDDMFDGKPVPENPARHAWRTAVAEIAEKAKAALPECNGRVDSAVKIVLAGDVELLADGKAKVASQSNGTTAYHIVNGSCDCKDFPRAPQGFCKHKLAYGLYKRAYPLAKAKLE
Ga0066903_1009481701	3300005764	Tropical Forest Soil	MVAVHTLSWEEVSAPDFEHSTRRAWREAVSEVAERAKAALPECNGRVEKAIAMVLAGDVELLPDGKAKVASQSNGQTVYHIADGTCDCADFPRAPQGQCKHRIARGIYLRATALA
Ga0066903_1022432643	3300005764	Tropical Forest Soil	MAIVTEISWDDMLDGKPLPETPARKAWREAVAEIDAKAKEKLPECNGRIDRAVKIVLAGDVELLPDGTAKVASQSNGTTAYHIVNGHCDCRDFEK
Ga0066903_1025373942	3300005764	Tropical Forest Soil	MAIVTEISWDDMLDGKPLPETPARKAWREAVAEIAEKAKATLPECNGRVDKAVAIVLAGDVELLPDGKAKVASQSNGTTAYFVVNGECPCKDFPQAPSGWCKHRV*
Ga0066903_1040960531	3300005764	Tropical Forest Soil	MAIVTEISWDDMLDGKPLPENPARQVWRKAVAEIADKAKAKLPECSGRVDSAIKMVLAGDVKLQADGTAK
Ga0066903_1060775121	3300005764	Tropical Forest Soil	MTIVSEISWNDIFDGKPLPETPARKAWREAVAEIADKARAKLPECSGRVDSAVKIVLAGDVELLADGT
Ga0068858_1019624311	3300005842	Switchgrass Rhizosphere	MAIVTEISWDDMLDGKPLPETPTRQAWRDAVSEIAARAKVTLPECNGRVDKAVAIVLAGDVELLPDGKAKVASQSNGT
Ga0068858_1022532861	3300005842	Switchgrass Rhizosphere	MAIVTEISWDDMLDGKPLPETPARQAWREAVAEIAEKAKVTLPECNGRVDKAVAIVLAGDVELLPDGKAKVASQSNGTPAYFVVNGECQCKDFPKASSGWCKHRIAAGMHKRA
Ga0075422_102897672	3300006196	Populus Rhizosphere	MAIVTEISWDDMLDGKPLPETPTRQAWREAVAEIAERAKAKLPECRGRIDAAIKIVLAGDVTLLADGTARVASQSNGSTAY
Ga0066658_105735521	3300006794	Soil	MAIVTEISWDDMLDGKPLPEHSARQAWREAVAEIAERAKATLPECNGRVDSAVKIVLAGDVELLTDGKAKVASQSNGTTVYHIVNGDCSCKDYAKAPSNWCKHRIA
Ga0066659_111247652	3300006797	Soil	MAIVAEISWDDMLAGKSLPENPARTAWRQAVAEIAEKAKVTLPECHGRVDSAVKIVLAGDVELLEGTKAKVASQSNGTTKYFIVNGECNCKDYAKAPSNWCKHVRFVHPKLAA*
Ga0075428_1002968531	3300006844	Populus Rhizosphere	MAIVTEISWDDMLDGKALPETPARKAWREAVAAIAEKAKTKLPECSGRVDSAVKIVLAGDIALQADGTAHVASQSNGSTAYHVVNGHC
Ga0075428_1006179282	3300006844	Populus Rhizosphere	MAIVTEISWDDMLDGKPLPETPARQAWREAVAEIADTAKAKLPECSGRVDSAVKIVLAGDVALQADGTAKVASQSNGSTAYHVVNGHCDCQDFAKAPHN
Ga0075428_1016022871	3300006844	Populus Rhizosphere	MAIVTEISWDDMLDGKPLPEHPARQAWREAVAEIAVKAKAKLPECSGRVDSAVKIVLAGDVALQADGTAKVASQSNGSTAYHVVNGHCDCALHKQH
Ga0075421_1002097484	3300006845	Populus Rhizosphere	MAIVTEISWDDMLDGKALPETPARKAWREAVAAIAEKAKTKLPECSGRVDSAVKIVLAGDIALQADGTAHVASQSNGSTAYHVVNGHCDCKDFAKAPHGFCKHVRFVHPKLA*
Ga0075421_1004839871	3300006845	Populus Rhizosphere	MRERNEAVAIVTEISWEDMFAGKALPDSPVRQAWRTAVAEIAEKAKATLPQCNGRVEKAVQIVLNGDVELLPDGKAKVASQSNGTTKYFVVNGECSCPDYPKAPQGF
Ga0075421_1009153981	3300006845	Populus Rhizosphere	MAIVTEISWDDMLDGIPLPETPARQAWREAVAEIADKAHEKLPACNGRIDKAVALVLAGDVQLLPDGTAQVASQSNGTTMYFVVNGTCECKDFAAAPSGWCQHVRFVHPKLTA*
Ga0075421_1013068681	3300006845	Populus Rhizosphere	MASVTEISWNDILDGKTLPDTPARQAWREAVAEIADKAKAKLPESASRVDRAVKLVLAGDVELLADGTAKVASQSNGT
Ga0075421_1019872792	3300006845	Populus Rhizosphere	MAIVTEISWDDMLDGKALPENPARKAWREAVPQIANKAKAKLPECSGRVDSAVKIVLAGDVELQADGTAKVASQSNGSTAYHVVNGECSCKDFAKAPHQFC
Ga0075430_1006036382	3300006846	Populus Rhizosphere	MAIVTEISWDDMLDGKSLPENPARTVWREAVAEIADKARAKLPESASRVDRAVKLVLAGDVELLADGTAKVASQSNGTSAYHVVNGHCDCRDYDKAPHQFCKHRV*
Ga0075431_1006098611	3300006847	Populus Rhizosphere	TEISWDDMLDGKALPETPARQAWREAVAEIAEKAKGTLPECNGRVDKAVAIVLAGDVELLPDGKAKVASQSNGTTQYFVVNGECQCKDFPKAPSGWCKHVRFVHSKLA*
Ga0075431_1010581981	3300006847	Populus Rhizosphere	MAIVTEMSWDDMFAGKALPESPVRQAWRTAVAEIAAKAKATLPQCNGRVESAVKIVLAGDIELLPDGKAKVASQS
Ga0075431_1011419482	3300006847	Populus Rhizosphere	MAIVTEISWDDMLDGKSLSEHPARQAWREAVAEIAEKAKATLPECNGRVDAAVKIVLAGDVELLADG
Ga0075431_1015412651	3300006847	Populus Rhizosphere	MAIVTEISWDDMLDGKPLPETPARKAWRDAVSEIAERAKATLPECNGRVDSAVKIVLAGDVELLPDGKA
Ga0075431_1021080751	3300006847	Populus Rhizosphere	MAIVTEISWDDMLDGIPLPETPARQAWREAVAEIADKAHEKLPACNGRIDKAVALVLAGDVQLLPDGTAQVASQSNGTTMYHIANSHCDCRDFERAPGQLCKHVRFV
Ga0075420_1008288701	3300006853	Populus Rhizosphere	MAIVTEISWDDMLDGKSLSEHPARQAWREAVAEIAEKAKATLPECNGRVDAAVKIVLAGDVELLADGKAKVASQSNGQTVYHVVNGECGCKDYYKAPSNWCKHRIAAGMAK
Ga0075420_1011448411	3300006853	Populus Rhizosphere	MAIVTEISWDDMLDGKPLPETATWQAWREAVAAIADKAQAKLPECSGRVDAAVKIVLAGDVTLQADDTAQVASQSNGTTAYHVINGHCDC
Ga0075434_1007720072	3300006871	Populus Rhizosphere	MAIVTEISWDDMLDGKQLPETPARKAWREAVAEIAEKAKGTLPECNGRVDKAVAIVLAGDVELLPDGKAKVASQSNGTTQYFVVNGECQCKDFPKAPSGWCKHVRFVHSKLA*
Ga0075434_1021814751	3300006871	Populus Rhizosphere	MAIVTEITWDDMLDGKLLPEMPARQAWREAVAEIADKAKAKLPECSGRVDAAVKIVLAGDVKVQSDGT
Ga0075429_1008274521	3300006880	Populus Rhizosphere	MAIVTEISWDDMLDGKSLSEHPARQAWREAVAEIAEKAKATLPECNGRVDAAVKIVLAGDVELLADGKAKVASQSNGQTVYHVVNGECSCKDYDKAPSNWCKHR
Ga0075424_1016420931	3300006904	Populus Rhizosphere	MSIVTEISWDDMWSGKPLPESPARKAYREAVTEIAEKAKATLPDCIGRVDAAVKIVLNGDVELLPDGTARVASQSNGTTKYFIVNGECT
Ga0075419_110544792	3300006969	Populus Rhizosphere	MAIVTEISWDDMLDGIPLPETPARQAWREAVAEIADKAHEKLPACNGRIDKAVALVLAGDVQLLPDGTAQVASQSNGTTMYFVVNGTCECKDFAAAPSGWC*
Ga0075435_1019633761	3300007076	Populus Rhizosphere	MAIVTEISWDDMLDGKSLPEHPARQAWREAVAEIADKARAKLPECNGRVDSAVKIVLAGDVALQADGTAKVASQSNGSTAYHVVNGHCDCKDFAK
Ga0066710_1016451731	3300009012	Grasslands Soil	MAIVAEISWDDMLAGKSLPENPARTAWRQAVAEIAEKAKVTLPECHGRVDSAVKIVLAGDVELLEGTKAKVASQSNGTTKYFIVNGECNCKDYAKAPSNWCKHVRFVHPKLAA
Ga0066710_1020213952	3300009012	Grasslands Soil	MAIVTEISWDDILDGKPLPETPARKIWREAVEEIAEKARTKLPECNGRVNSAVKIVLAGDVELMADGTA
Ga0099829_114984161	3300009038	Vadose Zone Soil	MAIVTEISWDDMFAGKALPDSPARTAFREAVAEIAEKAKITLPDCIGRVDSAVKIVLHGDVELLQDGTAKVASQSNGTTKYFIVNGECTCKDYPKAPSFWCKHRISAGL
Ga0099830_115212621	3300009088	Vadose Zone Soil	MTIVAQFSWDDIASKAFGNPARTAWREAVAEIAEKAKVTLPDCVGRVDSAVKIVLAGDVELLEGTKAKVASQSNGTTKYFIVNGECTCKDYAKAPSNW
Ga0099828_108181931	3300009089	Vadose Zone Soil	MAIVTEISWDDMFDGKPLPENPARQAWRAAVAEIAAKAKAALPETVNGRVEKAVQMVLNGDVELLPDGKAKVASQSNGTTQYVVCNGTCECALHKQHDTK*
Ga0111539_112369942	3300009094	Populus Rhizosphere	MAIVSEISWDDMLDGKPLPETPARKAWREAVAEIAEKAKATLPECTGHVDKAVAIVLAGDVELLPDGKAKVASQSNGTTQYFVVNGTCECKDFAAA
Ga0075418_120388341	3300009100	Populus Rhizosphere	MAIVTEISWDDMLDGKPLPETPARMAWREAVAEIAERAKATLPECNGRVDKAVAIVLAGDVELLPDGKAKVASQSNGSTAYFVVNGECQCKDFPKAPSGWCKHRIAAGLAKRAYP
Ga0105247_111703361	3300009101	Switchgrass Rhizosphere	MAIVTEISWDDMLDGKPLPETPARQVWRDAVSEIAARAKVTLPECNGRVDKAVAIVLAGDVELLPDGKAKVASQSNGTTAYFVVNGECQCKDFPTASSGWCKHRIAA
Ga0066709_1045786071	3300009137	Grasslands Soil	MAIVTEISWDDMLDSKPLPEHPARQAWREAVAEIADKARAKLPECSGRVDSAVKIVLAGDVELQADG
Ga0114129_101275672	3300009147	Populus Rhizosphere	MAIVTEISWDDMLDGKALPETPARQAWREAVAEIAEKAKATLPACNGRVEKAVAIVLAGDVELLPDGKAKVASQSNGTTAYFVVNGECQCKDFPKAPSGWCKHRVCRETARRNVEIP*
Ga0114129_101940326	3300009147	Populus Rhizosphere	MAIVTEISWDDMLDGKSLPENPARQAWREAVAEIADKARAKLPECSGRVDSAVKIVLAGDVELLADGTAKVASQSNGTTAYHVVNGHCDC
Ga0114129_104866831	3300009147	Populus Rhizosphere	MSIVTEISWDDMWSGKPLPESPARKAYREAVTEIAEKAKATLPDCIGRVDAAVKIVLNGDVELLPDGTTRVASQSNGTTKYF
Ga0114129_120175421	3300009147	Populus Rhizosphere	MAIVTEISWDDMLDGKPLPETPARKAWREAVAEIAEKAKATLPECNGRVDKAVAIVLAGDVELLPDGKAKVASQSNGTTQYFVVNGECQCKDFPKAPSGWCKHVRFVHSKLA*
Ga0114129_120474801	3300009147	Populus Rhizosphere	MEMEPMAIVTEISWDDMLDGKALPKHPTRKAWREAVAEIAEKAKAKLPECAGRVDSAVKIVLAGDVELQADGTAKVASQSNGSTAYHVVNGECSCKDFAKAPHQFCKHVRFVHPKLTDQR
Ga0111538_115612122	3300009156	Populus Rhizosphere	MAIVTEISWDDMLDGKPLPETPARQAWRGAVSEIAEKAKATLPECNGRVDKAVAIVLAGDVELLPDGKAKVASQSNGT
Ga0075423_110225312	3300009162	Populus Rhizosphere	MAIVTEISWDDMLDGKPLPETPARKAWREAVAEIAEKAKATLPECNGRVDKAVAIVLAGDVELLSDGKAKVASQSNGTTAYFVVNGEC
Ga0075423_111970701	3300009162	Populus Rhizosphere	MAIVTEISWNDMFAGKALPDSPARTAFREAVAEIAEKAKQTLPDCIGRVDSAVKIVLNGDVALLQDGTARVASQSNGTTKYFIVNGECECKDYPKAPSHWCKHVRFVHSKLA*
Ga0126374_110096411	3300009792	Tropical Forest Soil	MAIVTEISWDDMWSGKPLPESPARKAYREAVAEIADKAKQTLPDCIGRVDSAVKIVLNGDVELLPDGTARVASQSNGT
Ga0126380_110822072	3300010043	Tropical Forest Soil	MAIVSEISWDDMLEGKPLPETPARKAWREAVSEIAEKAKATLPACNGRVDKAVAIVLAGDVELLPDGKGKVASQSNGTTQYFV
Ga0126384_105325702	3300010046	Tropical Forest Soil	VAIVTEISWDDMLDGKPLPETPARQAWREAVAEIADKAKAKLPACAGRVDAAVKIALAGDVELLPDGTARVASQSNGSTAYQVVNGRCDCMDFAKAPHNLCKH
Ga0126382_115827282	3300010047	Tropical Forest Soil	MAIVTEISWDDMLDGKPLPEAPARQAWRDAVAEIAEKAKATLPACNGRVDKAVALVLAGDVELLPDVHSYFSLYKI*
Ga0126382_117034051	3300010047	Tropical Forest Soil	MVAVIETSWQDILDGKPLPETPARKAWREAVAEIAERAKQTLPECNGRVDSAVKIVLNGDVELLPDGKAKVASQSHGTTLYHIVNGECSCKDYGKAPSHWCKHRIAAGLAKRASALTK
Ga0126382_118263741	3300010047	Tropical Forest Soil	MAIVTEISWDDMLDGKPLPETPARKAWRDAVAEIAEKAKATLPECNGRVDSAVKIVLAGDVDLLPDGTAKVASQSN
Ga0126382_118947372	3300010047	Tropical Forest Soil	MTIVAQFSWDDIADPAFENPARKIWRDVVAEIAERAKTTLPECNGRVDSAVKIVLAGDVELLADGTAKVASASNGTTKYFIVNGECSCKDYPKAPSFWCKHRIAFGLAK
Ga0126376_117573841	3300010359	Tropical Forest Soil	MSIVTEISWDDMWSGKRLPESPARKAYREAVAEIAEKAKQTLPDCVGRVDSAIKIVLNNDVELLPDGTA
Ga0126376_127473821	3300010359	Tropical Forest Soil	MSIVAQFSWDDIADPTFENPARKIWRDAVAEIAKKAKQTLPECNGRVDSAVKIVLNGDVELLPDGKAKVASQSHGTTLYHIVNGECSCKDYAKAPSHWC
Ga0126372_127000181	3300010360	Tropical Forest Soil	IAIVTEISWDDMFDGESVSDNPARKAWREAVAEIADKAKAKLPECSGRVESAVKIVLAGDVELLEDGKAKVASQTNGSTVYHVVNGECTCKDYPKAPSNWCKHVRFVHPKLSV*
Ga0126377_127968201	3300010362	Tropical Forest Soil	MAIVTEISWDDMLEGKPLPETSARKAWRDAVSEIAEKAKATLPACNGRVDKAVAIVLAGDVELLPDGKAKVASQSNGTTQYFVVNGECSCPDFTQAPSQWCKHVLLVHHKLYI*
Ga0126383_106113251	3300010398	Tropical Forest Soil	MAIVAEISWDDIVDGKALPETPARKVWREAVAEIADKARAKLPECSGRVDSAVKIVLAGDVELLADGTAKVASQSNGASAYHVVNGHCDCRDYEKAPHQFCKHR
Ga0126383_114936732	3300010398	Tropical Forest Soil	MLTMAIVAEISWDDMFDGKPVPENPVRQAWREAVAEIAEKAKTALPECNGRVDSAVKIVLAGDVELLADGT
Ga0126383_134733482	3300010398	Tropical Forest Soil	MAIVTEISWNDMFAGKALPDSPARTAFREAVAEIAEKAKQTLPDCIGRVDSAVKIVLNGDVELLQDGTARVASQSNGTTKYFVVNGE
Ga0137391_112861561	3300011270	Vadose Zone Soil	MAIVTEISWNDMFAGKVLPDSPARTAFREAVAEIAEKAKITLPDCIGRVDSAVKIVLNGDVELFPDGTAKVASQSNGTTKYFIVNGECTCKDYPKAPSFWCKHRTLLLDSRVVEFEDVVY
Ga0137389_106312502	3300012096	Vadose Zone Soil	MAIVTEISWDDMFAGKALPDSPARTAFREAVAEIAEKAKITLPDCIGRVDSAVKIVLNGDVELLSDGTAKVASQSNGTTKYFIVNGECTCKDYPKAPSFWCKHRISAGS*
Ga0137388_109990821	3300012189	Vadose Zone Soil	MAIVTEISWDDMFAGKALPDSPARTAFREAVAEIAEKAKITLPDCIGRVDSAVKIVLNGDVELFPDGTAKVASQSNGTTQ
Ga0137365_106475772	3300012201	Vadose Zone Soil	VTIVTEISWDDMWSGKPLPESSARKAYREAVAEIAEKAKVTLPDCIGRVDSAVKIVLAGDVELLQDGTAKIASQSNGTTKYFVVNG
Ga0137399_116637731	3300012203	Vadose Zone Soil	MAIVTEISWDDMLDGKPLPETLARQAWRAAVAEIADKAKAKLPECSGRVESAIKIVLAGDVALQADGSAHVASQSNGN
Ga0137379_109064002	3300012209	Vadose Zone Soil	MAIVTEISWDDMFAGKALPDSPARTAFREAVAEIAEKAKITLPDCIGRVDSAVKIVLNGDVELLPDGTARVASQSNGTTKYFIVNGECTCKDYPKAPSFWCKHRISAGLAKRARTLAKTKLEQQ
Ga0137387_103458301	3300012349	Vadose Zone Soil	MAIVAEISWDDMLAGKSLPENPARTAWRQAVAEIAEKAKVTLPECHGRVDSAVKIVLAGDVELLEGTKAKVASQSNGTTKYFIVNGECNCKD
Ga0137387_103738601	3300012349	Vadose Zone Soil	MVTEISWDDMFDGKPVPENPARHAWRTAVAEIAEKAKAALPECNGRVDSAVKIVLAGDVELLADGKAKVASQSNGTTAYHIVNGSCDCKDFPRAPQGFCKHKLAYGLYKRAYPL
Ga0137387_110295162	3300012349	Vadose Zone Soil	MSIVAQFSWDDIADPAFENPTRKIWRDVVAEISERAKQTLPECNGRVDSAVKIVLNGDVELLPDGKAKVASQSNGTTVYHIVNGECSCKDYTKAP
Ga0137386_100233558	3300012351	Vadose Zone Soil	MVTEISWDDMFDGKPVPENPARHAWRTAVAEIAEKAKAALPECNGRVDSAVKIVLAGDVELLADGKAKVASQSNGTTAYHIVNGSCDCKDFPRAPQDFCKHKLAYGLYKRAYPLAKA
Ga0137384_110075361	3300012357	Vadose Zone Soil	MAIVTEISWDDMLDGKPLPEHPARQAWREAVAEIADKAKAKLPECSGRVDSAVKIVLAGDVALLADGTANVASQSNGCTAYQ
Ga0137375_108408252	3300012360	Vadose Zone Soil	MAIVTEISWDDMWSGKALPESPARKAFREAVAEIAEKAKATLPDCTGRVDSAVKIVLNNDVELLPDGTAKVASASNGTTKYFIVNGECSCKDYVKAPSNWCKHRIAAGLAKRAYPL
Ga0137361_117314961	3300012362	Vadose Zone Soil	MAIVTEIAWDDMLDGKPLPENPSRQAWRQAVSEVAAKAHATLPECSGRVDSAVKIVLAGDIELLANGTAKVASQSNGHVAYHIAN
Ga0137390_113353911	3300012363	Vadose Zone Soil	MAIVTEISWDDMLDGKPLPETPAHQAWRDAVAEIADKAKTKLPECSGRVDSAVKIALAGDVALQADGTAHVAS
Ga0137395_108883072	3300012917	Vadose Zone Soil	MAIVTEISWDDMFAGKAHPDSPARTAFREAVAEIAEKAKITLPDCIGRVDSAVKIVLNGDVELFPD
Ga0137419_112570261	3300012925	Vadose Zone Soil	MAIVTEISWDDMLDGKPLPETLARQAWRAAVAEIADKAKAKLPECSGRVESAIKIVLAGDVALQADGSAHVASQSNGNTAYQVVNGHCDCQDF
Ga0137410_106475492	3300012944	Vadose Zone Soil	MAIVTEISWDDMFAGKALPDSPARTAFREAVAEIAEKAKITLPDCIGRVDSAVKIVLNGDVELFPDGTAKVASQS
Ga0126375_108281141	3300012948	Tropical Forest Soil	MAIVTEISWDDMLDGKALPEHPARTAWREAVAEIVEKAKAKLPECSGRVESAVKIVLAGDVALLADGTARVASQSNGTTQYHVVNGHCDCR
Ga0163162_124621631	3300013306	Switchgrass Rhizosphere	MAIVTEISWDDMLDGKPLPETPAHQAWREAVAEIADKAHEKLPACNGRIDKAVALVLAGDVQLLPDGTVQVASQSNGTTMYHIANSHCDCRDFERAPGQLCKHRV
Ga0163162_130626441	3300013306	Switchgrass Rhizosphere	MSHTPQQQPLARGIEAMAIVTEISWDDMLDGKPLPETPARKAWRDAVAEIADKAKAKLPECRGRIDAAIKIVLAGDVALLADGTAKVASQSNGSTAYQVVNGHCDC
Ga0157377_111090701	3300014745	Miscanthus Rhizosphere	MAIVTEISWDDMLDGKPLPETPARKAWRDAVSEIAEKAKVTLPECNGRVDKAVALVLAGDVEILPDGKAKVASQSNGTSAYFVVNGECQCKDFPKASSG
Ga0157379_107308751	3300014968	Switchgrass Rhizosphere	MAIVTEISWDDMLDGKPLPETPTRQAWRDAVSEIAARAKVTLPECNGRVDKAVAIVLAGDVELLPDGKAKVASQSNGTPAYFVVNGEC
Ga0157379_113615281	3300014968	Switchgrass Rhizosphere	MEMEPMAIVTEISWDDMLDSKPLPEHPVRQAWREAVAEIADKARTTLPECSGRVDSAVKIVLAGDVEVQTDGTAQVASQSNGSTAYHVVNGH
Ga0182032_112769241	3300016357	Soil	MAIVTEISWDDMWSGKPLPESPARKAYREAVAEIADKAKQTLPDCIGRVDSAVKIVLNGDVELLPDGTAKVASQSNGTTKYFIVNGECTCKDYPKAP
Ga0163161_108138821	3300017792	Switchgrass Rhizosphere	MTIVAQFSWDDIASEDFGNPARTGWREAVADIAEKAKAKLPECSGRVDSAVKIVLAGDVELQADGTAKVASQSNGSTAYQVVNGHCNCQDFAKAPHQFCKHRV
Ga0184610_10994351	3300017997	Groundwater Sediment	MVAGTISKVEASWDQVFSGNLPENPARQAWRKAVAEVAEKAKAALPECNGRVESAVKIVLAGDVELLPDSKAKVASQSNGTTVYHVVNGECSYKDFPKAPQGF
Ga0207684_102351644	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MVSGSVSKIEMSWDDALSGNFPESPARTAWREAVAEIAEKAKATLPQCNGRVDSAVKIVLAGDVELLQD
Ga0207712_113623921	3300025961	Switchgrass Rhizosphere	MAIVTEISWDDMLDGKPLPETPARQAWREAVAEIADKAKAKLPECSGRVESAVKIVLAGDVALQADGTA
Ga0207677_108488761	3300026023	Miscanthus Rhizosphere	MAIVTEISWDDMLDGKPLPETPTRQAWRDAVSEIAARAKVTLPECNGRVDKAVAIVLAGDVELLPDGKAKVASQSNGTTAYFVVN
Ga0207703_117474761	3300026035	Switchgrass Rhizosphere	MAIVTEISWDDMLDGKPLPETPTRQAWRDAVSEIAARAKVTLPECNGRVDKAVAIVLAGDVELLPDGKAKVASQSNGTPAYFVV
Ga0207675_1006115482	3300026118	Switchgrass Rhizosphere	MAIVTEISWDDMLDGKPLPETPARQAWREAVAEIADKAKAKLPECSGRVESAVKIVLAGDVALQADGTAKVASQSNGSTAYQVVNGHCNCQDFAKAPHQFCKHRV
Ga0209814_103754802	3300027873	Populus Rhizosphere	MAIVTEISWNDILDGKTLPETPARIAWREAVAEIADKARAKLPECSGRVDSAVKIVLAGDVELLADGTAKVASQSNG
Ga0209814_104230581	3300027873	Populus Rhizosphere	MSIVTEISWDDMWSGKPLPESPARKAYREAVTEIAEKAKATLPDCIGRVDAAVKIVLNGDVELLPDGTARVASQSNGTTKYFIVNGECTCKDYPKAPSFWCKHRIAAGLM
Ga0209382_108913342	3300027909	Populus Rhizosphere	MAIVTEISWDDMLDGKPLPETPARKAWREAVAEIADKAKAKLPECSGRVDSAVKIVLAGDVALQADGTAKVASQSNGSTAYHVVNGHCDCKDFAKAPH
Ga0209382_123447461	3300027909	Populus Rhizosphere	MVIVTEITWDDIAAPACEHPARKAWRQAVAEIAEKAKAKLPECSGRVDSAVKLVLAGDVELQADGTAKVASQSRSQTVYHVANGV
Ga0307468_1017787081	3300031740	Hardwood Forest Soil	MAIVTEISWDDMLDGKPLPETPARQAWREAVAEIADKAKAKLPECSGRVDAAVKIVLVGDVELLPDGTVRVASQSSGTTAYH

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F077468

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences