NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome / Metatranscriptome Family F077265

Metagenome / Metatranscriptome Family F077265

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F077265
Family Type Metagenome / Metatranscriptome
Number of Sequences 117
Average Sequence Length 72 residues
Representative Sequence MALRIATRLPRLAIVGVVLLLASATLAVGAAKRLTAVPQGAPAPVAAATLVVPDLSGQAFVFAKGTLE
Number of Associated Samples 112
Number of Associated Scaffolds 117

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 11.11 %
% of genes near scaffold ends (potentially truncated) 99.15 %
% of genes from short scaffolds (< 2000 bps) 94.02 %
Associated GOLD sequencing projects 108
AlphaFold2 3D model prediction Yes
3D model pTM-score0.39

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Bacteria (100.000 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil
(21.367 % of family members)
Environment Ontology (ENVO) Unclassified
(30.769 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(56.410 % of family members)


 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      

 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Fibrous Signal Peptide: Yes Secondary Structure distribution: α-helix: 35.42%    β-sheet: 8.33%    Coil/Unstructured: 56.25%
Feature Viewer
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.39
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 117 Family Scaffolds
PF01551Peptidase_M23 80.34
PF13406SLT_2 9.40
PF00437T2SSE 1.71
PF01494FAD_binding_3 0.85

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 117 Family Scaffolds
COG06542-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductasesEnergy production and conversion [C] 1.71
COG0644Dehydrogenase (flavoprotein)Energy production and conversion [C] 0.85
COG0665Glycine/D-amino acid oxidase (deaminating)Amino acid transport and metabolism [E] 0.85
COG0578Glycerol-3-phosphate dehydrogenaseEnergy production and conversion [C] 0.85

 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms100.00 %
UnclassifiedrootN/A0.00 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
2199352025|deepsgr__Contig_177252All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria663Open in IMG/M
3300000891|JGI10214J12806_11994112All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria732Open in IMG/M
3300000955|JGI1027J12803_103427163All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1107Open in IMG/M
3300001538|A10PFW1_10369466All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria517Open in IMG/M
3300001686|C688J18823_10774019All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium610Open in IMG/M
3300002568|C688J35102_120417190All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia1053Open in IMG/M
3300005093|Ga0062594_101458683All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium699Open in IMG/M
3300005347|Ga0070668_100149324All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1889Open in IMG/M
3300005435|Ga0070714_101163898All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium752Open in IMG/M
3300005436|Ga0070713_101097630All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium769Open in IMG/M
3300005437|Ga0070710_11299083All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia541Open in IMG/M
3300005439|Ga0070711_100930519All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia743Open in IMG/M
3300005526|Ga0073909_10481564All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria598Open in IMG/M
3300005535|Ga0070684_100550126All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1071Open in IMG/M
3300005540|Ga0066697_10253932All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1041Open in IMG/M
3300005545|Ga0070695_100887886All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia719Open in IMG/M
3300005546|Ga0070696_101882520All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria518Open in IMG/M
3300005549|Ga0070704_100862732All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium812Open in IMG/M
3300005554|Ga0066661_10884675All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria522Open in IMG/M
3300005560|Ga0066670_10619803All Organisms → cellular organisms → Bacteria658Open in IMG/M
3300005843|Ga0068860_101775346All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium639Open in IMG/M
3300006031|Ga0066651_10611357All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium580Open in IMG/M
3300006032|Ga0066696_10627007All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium696Open in IMG/M
3300006058|Ga0075432_10115784All Organisms → cellular organisms → Bacteria1003Open in IMG/M
3300006581|Ga0074048_12676347All Organisms → cellular organisms → Bacteria549Open in IMG/M
3300006581|Ga0074048_12804036All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria794Open in IMG/M
3300006800|Ga0066660_10337715All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1218Open in IMG/M
3300006847|Ga0075431_101466121All Organisms → cellular organisms → Bacteria641Open in IMG/M
3300006953|Ga0074063_14293178All Organisms → cellular organisms → Bacteria573Open in IMG/M
3300009012|Ga0066710_104041497All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium549Open in IMG/M
3300009012|Ga0066710_104824293All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria504Open in IMG/M
3300009101|Ga0105247_11598137All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium535Open in IMG/M
3300009137|Ga0066709_103243629All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria593Open in IMG/M
3300009137|Ga0066709_103946602All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria539Open in IMG/M
3300009148|Ga0105243_11248993All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium758Open in IMG/M
3300009176|Ga0105242_12870494All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria532Open in IMG/M
3300009177|Ga0105248_12373332All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium604Open in IMG/M
3300010038|Ga0126315_11059235All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria546Open in IMG/M
3300010040|Ga0126308_11242958All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria528Open in IMG/M
3300010042|Ga0126314_11477545All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium511Open in IMG/M
3300010321|Ga0134067_10358429All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria576Open in IMG/M
3300010322|Ga0134084_10186132All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium719Open in IMG/M
3300010360|Ga0126372_10052172All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria2780Open in IMG/M
3300010366|Ga0126379_11463524All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium789Open in IMG/M
3300010375|Ga0105239_12913253All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria558Open in IMG/M
3300010403|Ga0134123_11930456All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium647Open in IMG/M
3300011003|Ga0138514_100058245All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria792Open in IMG/M
3300011271|Ga0137393_11221386All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium638Open in IMG/M
3300012096|Ga0137389_10130564All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium2036Open in IMG/M
3300012200|Ga0137382_10080926All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria2106Open in IMG/M
3300012204|Ga0137374_10343673All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1206Open in IMG/M
3300012208|Ga0137376_10448777All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1119Open in IMG/M
3300012209|Ga0137379_10576973All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1032Open in IMG/M
3300012209|Ga0137379_10831080All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria828Open in IMG/M
3300012211|Ga0137377_10630074All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1009Open in IMG/M
3300012354|Ga0137366_10489712All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria889Open in IMG/M
3300012356|Ga0137371_10455979All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria989Open in IMG/M
3300012917|Ga0137395_10807281All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium679Open in IMG/M
3300012948|Ga0126375_10802830All Organisms → cellular organisms → Bacteria745Open in IMG/M
3300012960|Ga0164301_10729034All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium749Open in IMG/M
3300012961|Ga0164302_10495144All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria861Open in IMG/M
3300012975|Ga0134110_10454293All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria576Open in IMG/M
3300012977|Ga0134087_10355705All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium701Open in IMG/M
3300012989|Ga0164305_10687748All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria834Open in IMG/M
3300013294|Ga0120150_1113033All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria510Open in IMG/M
3300013307|Ga0157372_13326029All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium512Open in IMG/M
3300013308|Ga0157375_10177202All Organisms → cellular organisms → Bacteria2282Open in IMG/M
3300013308|Ga0157375_11384868All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria828Open in IMG/M
3300013768|Ga0120155_1207665All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium515Open in IMG/M
3300014056|Ga0120125_1054819All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria882Open in IMG/M
3300014058|Ga0120149_1231341All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria518Open in IMG/M
3300014154|Ga0134075_10514935All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium537Open in IMG/M
3300014166|Ga0134079_10300447All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria713Open in IMG/M
3300015358|Ga0134089_10565169All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium505Open in IMG/M
3300015373|Ga0132257_104161456All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria526Open in IMG/M
3300018071|Ga0184618_10486150All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium518Open in IMG/M
3300018431|Ga0066655_10937916All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium594Open in IMG/M
3300018433|Ga0066667_11880722All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium545Open in IMG/M
3300019255|Ga0184643_1413234All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria557Open in IMG/M
3300019872|Ga0193754_1018282All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium753Open in IMG/M
3300019890|Ga0193728_1299208All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium612Open in IMG/M
3300020002|Ga0193730_1000837All Organisms → cellular organisms → Bacteria8520Open in IMG/M
3300020012|Ga0193732_1077538All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium542Open in IMG/M
3300024288|Ga0179589_10258096All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium776Open in IMG/M
3300025898|Ga0207692_10882398All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium588Open in IMG/M
3300025916|Ga0207663_10769151All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria766Open in IMG/M
3300025933|Ga0207706_11513712All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria547Open in IMG/M
3300025935|Ga0207709_10447708All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria997Open in IMG/M
3300026527|Ga0209059_1127731All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria960Open in IMG/M
3300026530|Ga0209807_1335434All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria514Open in IMG/M
3300026538|Ga0209056_10206387All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1433Open in IMG/M
3300026550|Ga0209474_10473515All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria635Open in IMG/M
3300027056|Ga0209879_1071997All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria547Open in IMG/M
3300027846|Ga0209180_10103202All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1626Open in IMG/M
3300027882|Ga0209590_10493124All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria791Open in IMG/M
3300028380|Ga0268265_12722621All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria500Open in IMG/M
3300028708|Ga0307295_10150556All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium646Open in IMG/M
3300028711|Ga0307293_10243734All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria571Open in IMG/M
3300028714|Ga0307309_10005920All Organisms → cellular organisms → Bacteria2042Open in IMG/M
3300028716|Ga0307311_10024969All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1509Open in IMG/M
3300028719|Ga0307301_10236697All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium595Open in IMG/M
3300028721|Ga0307315_10030680All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1435Open in IMG/M
3300028778|Ga0307288_10248399All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium697Open in IMG/M
3300028782|Ga0307306_10143894All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium659Open in IMG/M
3300028784|Ga0307282_10556929All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria557Open in IMG/M
3300028787|Ga0307323_10065540All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1288Open in IMG/M
3300028799|Ga0307284_10211372All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium764Open in IMG/M
3300028807|Ga0307305_10054219All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1846Open in IMG/M
3300028824|Ga0307310_10189040All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium968Open in IMG/M
3300028828|Ga0307312_10326696All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1001Open in IMG/M
3300028872|Ga0307314_10305779All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria508Open in IMG/M
3300028875|Ga0307289_10050269All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1666Open in IMG/M
3300028884|Ga0307308_10013340All Organisms → cellular organisms → Bacteria3691Open in IMG/M
3300028885|Ga0307304_10535765All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium539Open in IMG/M
3300031820|Ga0307473_11174273All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium569Open in IMG/M
3300032180|Ga0307471_103682724All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium542Open in IMG/M
3300032205|Ga0307472_102068837All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria572Open in IMG/M


 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil21.37%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil11.97%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil10.26%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere6.84%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil5.98%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil5.13%
PermafrostEnvironmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost4.27%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil3.42%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil2.56%
Serpentine SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil2.56%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil2.56%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere2.56%
SoilEnvironmental → Terrestrial → Soil → Loam → Grasslands → Soil1.71%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere1.71%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere1.71%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere1.71%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere1.71%
Groundwater SedimentEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment0.85%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment0.85%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil0.85%
Surface SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil0.85%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil0.85%
Corn RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere0.85%
Agricultural SoilEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil0.85%
Groundwater SandEnvironmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand0.85%
SoilEnvironmental → Terrestrial → Agricultural Field → Unclassified → Unclassified → Soil0.85%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere0.85%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere0.85%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere0.85%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere0.85%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere0.85%

Visualization
Powered by ApexCharts



Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
2199352025Soil microbial communities from Rothamsted, UK, for project Deep Soil - DEEP SOILEnvironmentalOpen in IMG/M
3300000891Soil microbial communities from Great Prairies - Wisconsin, Continuous corn soilEnvironmentalOpen in IMG/M
3300000955Soil microbial communities from Great Prairies - Iowa, Native Prairie soilEnvironmentalOpen in IMG/M
3300001538Permafrost active layer microbial communities from McGill Arctic Research Station, Canada - (A10-PF 4A)- 1 week illuminaEnvironmentalOpen in IMG/M
3300001686Grasslands soil microbial communities from Hopland, California, USAEnvironmentalOpen in IMG/M
3300002568Grasslands soil microbial communities from Hopland, California, USA - 2EnvironmentalOpen in IMG/M
3300005093Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All BlocksEnvironmentalOpen in IMG/M
3300005347Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaGHost-AssociatedOpen in IMG/M
3300005435Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaGEnvironmentalOpen in IMG/M
3300005436Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaGEnvironmentalOpen in IMG/M
3300005437Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaGEnvironmentalOpen in IMG/M
3300005439Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaGEnvironmentalOpen in IMG/M
3300005526Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1EnvironmentalOpen in IMG/M
3300005535Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaGEnvironmentalOpen in IMG/M
3300005540Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_146EnvironmentalOpen in IMG/M
3300005545Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaGEnvironmentalOpen in IMG/M
3300005546Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaGEnvironmentalOpen in IMG/M
3300005549Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaGEnvironmentalOpen in IMG/M
3300005554Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110EnvironmentalOpen in IMG/M
3300005560Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_119EnvironmentalOpen in IMG/M
3300005843Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2Host-AssociatedOpen in IMG/M
3300006031Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Angelo_100EnvironmentalOpen in IMG/M
3300006032Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145EnvironmentalOpen in IMG/M
3300006058Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1Host-AssociatedOpen in IMG/M
3300006581Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLPB (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300006800Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109EnvironmentalOpen in IMG/M
3300006847Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5Host-AssociatedOpen in IMG/M
3300006953Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHMB (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300009012Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159EnvironmentalOpen in IMG/M
3300009101Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaGHost-AssociatedOpen in IMG/M
3300009137Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158EnvironmentalOpen in IMG/M
3300009148Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaGHost-AssociatedOpen in IMG/M
3300009176Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaGHost-AssociatedOpen in IMG/M
3300009177Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaGHost-AssociatedOpen in IMG/M
3300010038Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot106EnvironmentalOpen in IMG/M
3300010040Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot55EnvironmentalOpen in IMG/M
3300010042Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105BEnvironmentalOpen in IMG/M
3300010321Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09212015EnvironmentalOpen in IMG/M
3300010322Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_2_24_1 metaGEnvironmentalOpen in IMG/M
3300010360Tropical forest soil microbial communities from Panama - MetaG Plot_6EnvironmentalOpen in IMG/M
3300010366Tropical forest soil microbial communities from Panama - MetaG Plot_24EnvironmentalOpen in IMG/M
3300010375Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaGHost-AssociatedOpen in IMG/M
3300010403Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3EnvironmentalOpen in IMG/M
3300011003Agricultural soil microbial communities from Tamara ranch near Red Deer, Alberta, Canada - d1t9i015EnvironmentalOpen in IMG/M
3300011271Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaGEnvironmentalOpen in IMG/M
3300012096Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaGEnvironmentalOpen in IMG/M
3300012200Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaGEnvironmentalOpen in IMG/M
3300012204Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_100_16 metaGEnvironmentalOpen in IMG/M
3300012208Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaGEnvironmentalOpen in IMG/M
3300012209Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaGEnvironmentalOpen in IMG/M
3300012211Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaGEnvironmentalOpen in IMG/M
3300012354Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_60_16 metaGEnvironmentalOpen in IMG/M
3300012356Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaGEnvironmentalOpen in IMG/M
3300012917Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaGEnvironmentalOpen in IMG/M
3300012948Tropical forest soil microbial communities from Panama - MetaG Plot_14EnvironmentalOpen in IMG/M
3300012960Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MGEnvironmentalOpen in IMG/M
3300012961Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MGEnvironmentalOpen in IMG/M
3300012975Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_11112015EnvironmentalOpen in IMG/M
3300012977Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_5_24_1 metaGEnvironmentalOpen in IMG/M
3300012989Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MGEnvironmentalOpen in IMG/M
3300013294Permafrost microbial communities from Nunavut, Canada - A3_65cm_0MEnvironmentalOpen in IMG/M
3300013307Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaGHost-AssociatedOpen in IMG/M
3300013308Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaGHost-AssociatedOpen in IMG/M
3300013768Permafrost microbial communities from Nunavut, Canada - A35_65cm_0MEnvironmentalOpen in IMG/M
3300014056Permafrost microbial communities from Nunavut, Canada - A20_5cm_0MEnvironmentalOpen in IMG/M
3300014058Permafrost microbial communities from Nunavut, Canada - A3_65cm_0.25MEnvironmentalOpen in IMG/M
3300014154Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09212015EnvironmentalOpen in IMG/M
3300014166Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09182015EnvironmentalOpen in IMG/M
3300015358Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_40cm_5_24_1 metaGEnvironmentalOpen in IMG/M
3300015373Combined assembly of cpr5 rhizosphereHost-AssociatedOpen in IMG/M
3300018071Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_b1EnvironmentalOpen in IMG/M
3300018431Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104EnvironmentalOpen in IMG/M
3300018433Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116EnvironmentalOpen in IMG/M
3300019255Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300019872Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H1a1EnvironmentalOpen in IMG/M
3300019890Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1c1EnvironmentalOpen in IMG/M
3300020002Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1a1EnvironmentalOpen in IMG/M
3300020012Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1s1EnvironmentalOpen in IMG/M
3300024288Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_08_16fungalEnvironmentalOpen in IMG/M
3300025898Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025916Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025933Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025935Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300026527Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_151 (SPAdes)EnvironmentalOpen in IMG/M
3300026530Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_154 (SPAdes)EnvironmentalOpen in IMG/M
3300026538Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114 (SPAdes)EnvironmentalOpen in IMG/M
3300026550Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145 (SPAdes)EnvironmentalOpen in IMG/M
3300027056Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N3_20_30 (SPAdes)EnvironmentalOpen in IMG/M
3300027846Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300027882Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300028380Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300028708Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_152EnvironmentalOpen in IMG/M
3300028711Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_150EnvironmentalOpen in IMG/M
3300028714Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_196EnvironmentalOpen in IMG/M
3300028716Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_198EnvironmentalOpen in IMG/M
3300028719Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_182EnvironmentalOpen in IMG/M
3300028721Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_355EnvironmentalOpen in IMG/M
3300028778Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_142EnvironmentalOpen in IMG/M
3300028782Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_193EnvironmentalOpen in IMG/M
3300028784Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_121EnvironmentalOpen in IMG/M
3300028787Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_381EnvironmentalOpen in IMG/M
3300028799Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_123EnvironmentalOpen in IMG/M
3300028807Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_186EnvironmentalOpen in IMG/M
3300028824Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_197EnvironmentalOpen in IMG/M
3300028828Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_202EnvironmentalOpen in IMG/M
3300028872Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_204EnvironmentalOpen in IMG/M
3300028875Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_143EnvironmentalOpen in IMG/M
3300028884Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_195EnvironmentalOpen in IMG/M
3300028885Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_185EnvironmentalOpen in IMG/M
3300031820Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515EnvironmentalOpen in IMG/M
3300032180Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515EnvironmentalOpen in IMG/M
3300032205Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05EnvironmentalOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap


 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
deepsgr_030134202199352025SoilMALRIATRLPRLVIVGVVLLLASATLAVGAAKRLTAVPQGAPAPVSAPTLVVPDLSGQAF
JGI10214J12806_1199411223300000891SoilMALRIATRLPRLAILGVVLLLASATLAVGAAKRLTAVPSGAPAPVAVATLVVPDVSGQAF
JGI1027J12803_10342716313300000955SoilMALRIALRLPRLAIVGVVLLLASATLAVGAAKRMAAVPQGAPAPVATPTVTVPDITGQAFVFA
A10PFW1_1036946623300001538PermafrostMALRIATRLPRLAIVGVVLLLASATLAVGAAKRLTAVPSGAPAPVAVATLVVPDV
C688J18823_1077401923300001686SoilMALRIATRLPRLAVLGAVLLLASATLAVGAAQRMAAIPQGAPAPVPVATVVVPDVTGQAFVFAKGTL
C688J35102_12041719023300002568SoilMALRIATRLPRLAIVGIVLLLASATLAVGAAKRMAAVPQGAPAPVTTPTVTVPDIKGQAFVFAK
Ga0062594_10145868313300005093SoilMALRIATRLPRLAVVGVVLLLASATLAVGAAKRMAAVPQGAPAPVPVATVVVPDVTGQAFVFAKGT
Ga0070668_10014932433300005347Switchgrass RhizosphereMALRIATRLPRLVIVGVVLLLASATLAVGAAKRLTAVPQGAPAPVSAPTLVVPDLSGQAFVFA
Ga0070714_10116389813300005435Agricultural SoilMALRIATRLPRLVIVGVVLLLASATLAVGAAKRLTAVPQGAPAPVSAPTLVVPDLSGQAFVFAKGTLEDTGFAWHVMGPVHGYAANKVASQ
Ga0070713_10109763013300005436Corn, Switchgrass And Miscanthus RhizosphereMALRIATRLPRLVIVGVVLLLASATLAVGAAKRLTAVPQGAPAPVSAPTLVVPDLSGQAFVFAKGTLED
Ga0070710_1129908323300005437Corn, Switchgrass And Miscanthus RhizosphereMALRIATRLPRLAIVGVVLLLASATLAVGAAKRMAAVPQGAPAPVATPTVTVPDITGQAFVF
Ga0070711_10093051923300005439Corn, Switchgrass And Miscanthus RhizosphereMAALAARLPRLAVIGGVLLFASATLTWGAAQRLTAVPTTKRTVFVKPTVVVPDVTGQAFVFAKGTLEDAGFAWHV
Ga0073909_1048156413300005526Surface SoilMALRIATRLPRLVIVGAVLLLASATLAVGAAKRLTAVPQGAPAPVSAPTLVVPDLSGQAFVFAKGTLEDTGF
Ga0070684_10055012613300005535Corn RhizosphereMALRIATRLPRLVIVGVVLLLASATLAVGAAKRLTAVPQGAPAPVSAPTLVVPDLSG
Ga0066697_1025393213300005540SoilMALRTAQRLPRLVIVGAVLLLASATLAVGAAKRLTAVPKGAPAPVAAPTLVVPDV
Ga0070695_10088788623300005545Corn, Switchgrass And Miscanthus RhizosphereMALRIATRLPRLAIVGLVLLLASATLAVGAAKKMAATPQGAPAPVATPTVIVPDIAGQAFVFAKGTLEDAGLAWKVVGSV
Ga0070696_10188252023300005546Corn, Switchgrass And Miscanthus RhizosphereMASSASPVVGLEFKPFSADATCMALRIAHRLPRLAVVGVVLLLASATLAVGAAKRLTAVPKTTPVPVTTPTLVVPD
Ga0070704_10086273223300005549Corn, Switchgrass And Miscanthus RhizosphereMALRIATRLPRLAVVGVVLMLASATLAVGAAKRMAAVPKGAPAPVPVATVVVPDVTGQAFVFA
Ga0066661_1088467523300005554SoilMALRIATRLPRLVVVGAVLLLASATLAVGAAKRLTAVPKGAPAPLTAPTVVVPDVIGQAFVFAKGALEDTGF
Ga0066670_1061980313300005560SoilMALRIATRLPRLAIVGLVLLLASATLAVGAAKRMAAVPQGAPAPVATPTVTVPDIAGQAFVFAKGTLED
Ga0068860_10177534623300005843Switchgrass RhizosphereMALRIATRLPRLVIVGVVLLLASATLAVGAAKRLTAVPQGAPAPVSAPTLVVPDLSGQAFVFAKGTLEDTGFAWHVMGPV
Ga0066651_1061135713300006031SoilMALRIATRLPRLAIVGVVLLLASATLAVGAAKRMAAVPQGAPAPVTTPTVGVPDITGQAFVFAKGTLEDAGLAWKVVGSVHGYAANKVS
Ga0066696_1062700723300006032SoilMALRIATRLPRLAAVGIVLLLASATLAVGAAKRMSAVPKGAPAPVPVATVIVPDVT
Ga0075432_1011578413300006058Populus RhizosphereMPWSPSPAPGVEFKLFSADCRSMALRIATRLPRLAIVGLVLLLASATLAVGAAKRMAAVPQGAPAPVAPPTVTVPDIAGQAFVFAKGTLE
Ga0074048_1267634713300006581SoilMALRIASRLPRLAIVGVVLLLASATLAVGAAKRLTAVPQGAPAPVSAPTLVVPDLSGQAFVFAKGTLEDTG
Ga0074048_1280403613300006581SoilMALRIATRLPRLAIVGMVVMLASATLAVGAAKRLTAVPKGAPAPVAPATLVVPDLAGQAFVFAKG
Ga0066660_1033771523300006800SoilMALRIATRLPRLAVVGAVVLLASATLAVGAAKRLTAVPRGAPAPVTAATVVVP
Ga0075431_10146612123300006847Populus RhizosphereMPWSPSPAPGVEFKPFFADCRSMALRIATRLPRLAIVGLVLLLASATLAVGAAKRMAAVPQGAPAPVSPPTVTVPDIAGQAFVFAKG
Ga0074063_1429317813300006953SoilMALRIATRLPRLVIVGVVLLLASATLAVGAAKRLTAVPQGAPAPVSAPTLVVPDLSGQAFVFAKGTLEDTGFAWHVMG
Ga0066710_10404149723300009012Grasslands SoilMALRIATRLPRLAIVGVVLLLASATLAVGAAKRLTAVPQGTPAPIAAATLVVPDLSGQAFVFAKGTLEDTGFAWQVIGSVRGYAA
Ga0066710_10482429323300009012Grasslands SoilMALRIATRLPRLAIVGVVLLLASATLAVGAAKRLTAVPNGAPAPLTPATVVVPDVTGQAFVFAKGTLEDTGFAWHVVGSVHGYAANKVS
Ga0105247_1159813713300009101Switchgrass RhizosphereVGLEFDPVYADSRNMALRIATRLPRLVIVGVVLLLASATLAVGAAKRLTAVPSGAPAPVAVATMVVPDLSGQAFVFAKGTLEDTGFAWHVMG
Ga0066709_10324362923300009137Grasslands SoilMALRIATRLPRLAVVGIVLLLASATLAIGAAKRMSAVPKGAPAPVPVATVVVPDITRQAFVFAK
Ga0066709_10394660213300009137Grasslands SoilMALRIATRLPRLVVVGAVLLLASATLAVGAAKRLTAVPQGAPAPLTPATVVVPDVTGQASVFAKGTL
Ga0105243_1124899323300009148Miscanthus RhizosphereVGLEFDPVYADSRNMALRIATRLPRLVIVGVVLLLASATLAVGAAKRLTAVPSGAPAPVAVA
Ga0105242_1287049413300009176Miscanthus RhizosphereMALRIATRLPRLAIVGVVLLLASATLAVGAAKRMATVPQGAPAPVTTPTVTVPDIRGQAFVFAKGTLEDAGLAWKVVGSVHGFAANKVAEQ
Ga0105248_1237333213300009177Switchgrass RhizosphereMALRIATRLPRLAILGVVLLLASATLAVGAAKRMATVPQGAPAPVTTPTVTVPDI
Ga0126315_1105923513300010038Serpentine SoilMAALAARLPRVVVLGAVLLFASATLTWGAAKRLTAVPAASPTPVAKPTVVVPDVTGQAFVFAKGT
Ga0126308_1124295823300010040Serpentine SoilVGVEFPHVLADSQDMALRIATRLPRLAIVGVVLLLASATLAVGAAKRLTAVPNGAPAPVAAATIVVPDVTGQAFVFAKGTLEDTGFAW
Ga0126314_1147754523300010042Serpentine SoilVGVELVRALADAQDMALRIATRLPRLVVVGLVLLLASGTLAIGAAKRLTAVPTGAPAPVAAPTIVVPDVDGQAFVFAKGTLEDTGFAWHVVGS
Ga0134067_1035842913300010321Grasslands SoilMALRIATRLPRLAIVGVVLLLASATLAVGAAKRMTAVPEGPPPPVAAATLVVPDLSGQAFVFAKGTL
Ga0134084_1018613213300010322Grasslands SoilMALRIATRLPRLAIVGVVLLLASATLAVGAAKRMAAVPQGASAPVTTPTVGVPDITGQAFVF
Ga0126372_1005217233300010360Tropical Forest SoilMALRIATRLPRLAIVGVVLLLASATLAVGAAKKMAATPQGAPAPVAIPTVTVPDITGQAFVFAKGTLEDAGLAWKVVGSVHGFAANKVATQ
Ga0126379_1146352423300010366Tropical Forest SoilMALRIATRLPRLAIVGVVLLLASATLAVGAAKKMAATPQGAPAPVAIPTVTVPDITGQAFVFAKGTLE
Ga0105239_1291325313300010375Corn RhizosphereMALRIATRLPRLAILGVVLLLASATLAVGAAKRMATVPQGAPAPVTTPTVTVPDIRGQAFVFAKGTLEDAGLAWKVV
Ga0134123_1193045623300010403Terrestrial SoilMALRIATRLPRLAVVGVVLLLASATLAVGAAKRMAAVPQGAPAPVPVATVVVPDVT
Ga0138514_10005824523300011003SoilVVGLEFKRFSADGTSMALRIAQRLPRLAVVGVVLLLASATLAVGAAKRLTAVPKGAPAPITAPTLVVP
Ga0137393_1122138623300011271Vadose Zone SoilVGLEFKPLSADSRSMALRIATRLPRLAIVGVVLLLASATLAVGAAKRMTAVPEGAPAPVAPATLVVPD
Ga0137389_1013056413300012096Vadose Zone SoilVVGLEFKLFSADSRSMALRIATRLRRLVIVGAVLLLASAALAVGAAKRLTAVPPGAPAPVPVATLVVPDLSGQAFVFVK
Ga0137382_1008092613300012200Vadose Zone SoilMALRIATRLPRLAIVGVVLLLASATLAVGAAKRMTAVPKGAPAPVAAATLVVPDLAGQAFVFPKGTLEDTGFAWQVIGSVHGYAGITVVRQ
Ga0137374_1034367323300012204Vadose Zone SoilMALRIATRLPRLAVIGAVLLLASATLAVGAAKRMAAVPQGAPAPVPVATVVVPDVTGQAFVFAKGTLEDTGLAW
Ga0137376_1044877713300012208Vadose Zone SoilVGLEFKPLSADSRSMALRIATRLPRLAIVGVVLLLASATLAVGAAKRMTAVPEGPPPPVAAATLVVP
Ga0137379_1057697313300012209Vadose Zone SoilVGLEFKPISADSRNMALRIATRLPRLAIVGVVLLLASATLAVGAAKRMTAVPNGAAPPVAVATLV
Ga0137379_1083108023300012209Vadose Zone SoilMALRIATRLPRLVIVGVVLLLASATLAVGAAKRMTAVPKGAPAPVTAATLVVPDLSGQAFVFAKGTLED
Ga0137377_1063007423300012211Vadose Zone SoilMALRIATRLPRLAIVGVVLLLASATLAVGAAKRLTAVPQGAPAPVAAATLVVPDLSGQAFVFAKGTLEDTGFAWQVIGSVHGYAANKVAR
Ga0137366_1048971223300012354Vadose Zone SoilVGLEFKRRRADLRNMALRIATRLPRLAVVGLVMLLASATLAVGAAKRLTAVPKGASAPVTAPTMVVPDITGQAFVFAKGTLEDTGFAWKVIGSVHGF
Ga0137371_1045597913300012356Vadose Zone SoilMGVSADGRNMAALAARLPRLAVIGGVLLFASATLTWGAAKRLTAVPAAKHTVVAKTTVIVPDVTGQAFVFAKGTLEDAGFAWQVGGRVHGYS
Ga0137395_1080728113300012917Vadose Zone SoilMALRIATRLPRLAIVGVVLLLASATLAVGAAKRMTAVPNGAPAPVAAATLVVPDL
Ga0126375_1080283013300012948Tropical Forest SoilMALRIATGLPRLAIVGVVLLLASATLAVGAAKKMAVTPQGAPAPVTTPTVTVPDITGQAF
Ga0164301_1072903413300012960SoilVGLEFKPIYADSRNMALRIATRLPRLVIVGVVLLLASATLAVGAAERLTAVPSGAPPPVAVPTMVVPDLSGQAF
Ga0164302_1049514423300012961SoilVGLEFKPISADSQNMALRIATRLPRLAIVGVVLLLASATLAVGAAKRMTAVPEGVPAPVAPATLVVPDLSGQAFVFAKGTL
Ga0134110_1045429323300012975Grasslands SoilMALRIATRLPRLAVVGIVLLLASATLAVGAAKRMSAVPKGAPAPVPVATVIVLDVTGQAFVFA
Ga0134087_1035570523300012977Grasslands SoilMALRIATRLPRLAIVGVVLLLASATLAVGAAKRLTAVPQGAPAPVAAATLVVPDLSGQAFVFAKGTLE
Ga0164305_1068774813300012989SoilVGLEFKPIYADSRNMALRIATRLPRLAIVGVVLLLASATLAVGAAKRLTAVPSGAPPPVAVPT
Ga0120150_111303313300013294PermafrostVGLEFKPVSADSRDMALRIATRLPRLAIVGVVLLLASATLAVGAAKRMTAVPNGPAPPVAVATLVVPDVSGQAFVFAKGT
Ga0157372_1332602913300013307Corn RhizosphereMALRIATRLPRLAVVGVVLLLASATLAVGAAKKMAATPQGAPAPVATPTVIVPDIAGQAFVFAKGTLEDAGLAWKVVGSVHG
Ga0157375_1017720233300013308Miscanthus RhizosphereVGLEFDPVYADSRNMALRIATRLPRLLIVGVVLLLASATLAVGAAKRLTAVPSGAPAPVAVATMVVPDLSGQAFVFAK
Ga0157375_1138486813300013308Miscanthus RhizosphereVGLEFKPISADSQNMALRIATRLPRLAILGVVLLLASATLAVGAAKRLTAVPSGAPAPVAVATMVVPDVSGQAF
Ga0120155_120766513300013768PermafrostMGLEFKPGYADSRNMALRIATRLPRLAIVGVVLLLASATLAVGAAKRLTAVPKGAPAPVAVATLVVPD
Ga0120125_105481913300014056PermafrostVVGLEFKLLSADSQSMALRIATRLPRLVIVGVVLLLASATLAVGAAKRLTAVPPGAPAPVPVATLVVPDLSGQAFVFAKGTLEDTGFAWQVIGSVHGYA
Ga0120149_123134113300014058PermafrostVGLEFKPISADSGNMALRIATRLPRLAIVGVVLLLASATLAVGAAKRLTAVPSGAPAPVAVATLVVPD
Ga0134075_1051493523300014154Grasslands SoilMALRIATRLPRLAIVGVVLLLASATLAVGAAKRLTAVPQGAPAPVAAATLVVPDLSGQAFVFAKGTLEDTGFAWQVIGSV
Ga0134079_1030044723300014166Grasslands SoilMALRIATRLPRLAIVGLVLLLASATLAVGAAKRISAVPKGAPAPVPVATVVVPDVTGQAFVFAKGTLEDT
Ga0134089_1056516913300015358Grasslands SoilVGLEFKPISADSWSMALRIATRLPRLAIVGVVLLLASATLAVGAAKRLTAVPNGAPAPVAVATLVVPDVSGQAFV
Ga0132257_10416145623300015373Arabidopsis RhizosphereMALRIATRLPRLAILGVVLLLASATLAVGAAKRMATVPQGAPAPVTTPTVTVP
Ga0184618_1048615023300018071Groundwater SedimentLWASLVVGLESKPVSADSRTMALRIATRLPRLVIVGVVLLLASATLAVGAAKRLTAVPQGAPAPVSAPTLVVPDLSGQAF
Ga0066655_1093791613300018431Grasslands SoilMALRIATRLPRLAIVGVVLLLASATLAVGAAKRMAAVPQGAPAPVTTPTVTFPDITGQASVFAKGTLEDAGLAWKVAGTVHGYAANKVAKQSP
Ga0066667_1188072223300018433Grasslands SoilMALRIATRLPRLAIVGVVLLLASATLAVGAAKRLTAVPQGAPAPVAAASLVVPDLSGQAFVFAKGTLEDTGFAWQV
Ga0184643_141323423300019255Groundwater SedimentMALRIATRLPRLAIVGVVLLLASATLAVGAAKRLTAVPSGAPAPVAVATLVVPDLSGQAFVFAKGTLE
Ga0193754_101828223300019872SoilMALRIASRLPRLAIVGVVLLLASATLAVGAAKRLTAVPQGAPAPVSAPTLVVPDLSGQAFVFAKGTLEDTGFAWHVMGPVHGYA
Ga0193728_129920813300019890SoilMALRIATRLPRLAIVGVVLLLASATLAVGAAKRLTAVPQGAPAPVDAATLVVPDLSG
Ga0193730_100083713300020002SoilMALRIATRLPRLVIVGVVLLLASATLAVGAAKRLTAVPQGAPAPVSAPTLVVPDLSGQAFVFAK
Ga0193732_107753813300020012SoilMALRIATRLPRLVIVGVVLLLASATLAVGAAKRLTAVPQGAPAPVSAPTLVVPDLSGQAFVFAKGTLEDTGFAW
Ga0179589_1025809623300024288Vadose Zone SoilMALRIASRLPRLAIVGVVLPLASATLAVGAAKRLTAVPQGAPAPVSAPTLVVPDLSGQAFVFAKGTLEDTGFAWHVMGSVRG
Ga0207692_1088239823300025898Corn, Switchgrass And Miscanthus RhizosphereMALRIATRLPRLAIVGVVLLLASATLAVGAAKRMAAVPQGAPAPVATPTVTVPDITGQAFVFAK
Ga0207663_1076915123300025916Corn, Switchgrass And Miscanthus RhizosphereMAALAARLPRLAVIGGVLLFASATLTWGAAQRLTAVPTTKRTVFVKPTVVVPDVTGQAFVFAKGTLEDAGFAWHVGGKVQGF
Ga0207706_1151371223300025933Corn RhizosphereMALRIATRLPRLAVVGVVLLLASATLAVGAAKRMAAVPQGAPAPVPVATVVVPDVTGQAFVFAKGTLEDTGLAWKVVGSVHGYSVNK
Ga0207709_1044770813300025935Miscanthus RhizosphereMALRIATRLPRLVIVGVVLLLASATLAVGAAKRLTAVPSGAPAPVAVATMVVPDLSGQAFVFAK
Ga0209059_112773113300026527SoilMALRIATRLPRLAVVGVVLLLASATLAVGAAKRISAVPKGAPAPVPVATVVVPDVTGQA
Ga0209807_133543423300026530SoilMALRIATRLPRLAVVGIVLLLASATLAVGAAKRMAAVPKGAPAPVPVATVVVPDVTGQAFVFAKGTLEDT
Ga0209056_1020638713300026538SoilMALRIATRLPRLAIVGVVLLLASATLAVGAAKRMTAVPKGAPAPVAAATLVVPDLAGQAFVFAKGTLEDTGF
Ga0209474_1047351523300026550SoilMALRIATRLPRLAAVGIVLLLASATLAVGAAKRMSAVPKGAPAPVPVATVIVPD
Ga0209879_107199713300027056Groundwater SandMALRIATRLPRLAVIGLVLLLASATLAVGAAKRLTAVPKGASAPVSVPAMLVPDVTGQAFVFAKGTLEDT
Ga0209180_1010320223300027846Vadose Zone SoilMALRIATRLPRLAIVGVVLLLASATLAVGAAKRMTAVPEGAPAPVAPATLVVPDLSGQAFVFAKGTLEDNGFAWQVLGSVHGY
Ga0209590_1049312423300027882Vadose Zone SoilMALRIATRLPRLAVVGLVVLLASATLAVGAAKRLTAVPKAAPAPVAVPTMVVPDIAGQAFVFAKGTLEDTGFAWKVVGSV
Ga0268265_1272262123300028380Switchgrass RhizosphereMALRIATRLPRLAVVGVVLLLASATLAVGAAKRMAAVPQGAPAPVPVATVVVPDVTGQAFVFAKGTLEDTGLAWKVVGSV
Ga0307295_1015055623300028708SoilMALRIATRLPRLVIVGVVLLLASATLAVGAAKRLTAVPQGAPAPVSAPTLVVPDLSGQAFVFAKGT
Ga0307293_1024373423300028711SoilMPSSVSPLVGLEFKPISADSQNMALRIATRLPRLAILGVVLLLASATLAVGAAKRLTAVPSGAPAPVAVATMVVPDVSGQAFV
Ga0307309_1000592033300028714SoilMALRIATRLPRLVIVGVVLLLASATLAVGAAKRLTAVPQGAPAPVSAPTLVVPDLSGQ
Ga0307311_1002496913300028716SoilMALRIATRLPRLAIVGVVLLLASATLAVGAAKRLTAVPQGAPAPVAAATLVVPDLSGQAFVFAKGTLEDTGFAWQVIGSVHG
Ga0307301_1023669713300028719SoilMALRIATRLPRLVVVGVVLLLASATLAVGAAKRLTAVPQGAPAPVSAPTLVVPDLSGQAFVFAKGTLEDTGFAWHVM
Ga0307315_1003068023300028721SoilMPSSVSPLVGLEFKPISADSQNMALRIATRLPRLAILGVVLLLASATLAVGAAKRLTAVPSGAPAPVAVATLVVPD
Ga0307288_1024839913300028778SoilMALRIAHRLPRLAVLGAVLLLASATLAVGAAKRMAAVPQGAPAPVPVATVVVPDVTGQAFVFAKGTLEDTGLAWKVIGSVHGYA
Ga0307306_1014389423300028782SoilMALRIATRLPRLVVVGVVLLLASATLAVGAAKRLTAVPQGAPAPVSAPTLVVPDLSGQA
Ga0307282_1055692923300028784SoilMALRIATRLPRLAIVGVVLLLASATLAVGAAKRLTAVPQGAPAPVAAATLVVPDLSGQAFVFAKGTLEDTGFAWQVIGS
Ga0307323_1006554023300028787SoilMALRIATRLPRLAVIGAVLLLASATLAVGAAKRMAAVPQGAPAPVPVATVVVPDVTGQAFVFAKGTLEDTGLAWKV
Ga0307284_1021137213300028799SoilMALRIAHRLPRLAVLGAVLLLASATLAVGAAKRMAAVPQGAPAPVPVATVVVPDVTGQAFVFAKGTLEDTGLAWKVVGGVHGY
Ga0307305_1005421933300028807SoilMALRIATRLPRLAIVGVVLLLASATLAVGAAKRLTAVPQGAPAPVAAATLVVPDLSGQAFVFAKGTLEDTG
Ga0307310_1018904023300028824SoilMALRIATRLPRLAVLGAVLLLASATLAVGAAKRMAAVPQGAPAPVPVATVVVPDVTGQAFVFA
Ga0307312_1032669613300028828SoilMALRIATRLPRLVILGVVLLLASATLAVGAAKRLTAVPSGAPAPVAVATLVVPDVSGQAF
Ga0307314_1030577923300028872SoilMALRIATRLPRLAVIGAVLLLASATLAVGAAKRMAAVPQGAPAPVPVATVVVPDVTGQAFVFAKGTLEDTGL
Ga0307289_1005026923300028875SoilMALRIATRLPRLVIVGVVLLLASATLAVGAAKRLTAVPQGAPAPVSAPTLVVPDLSGQAFVFAKGTLEDTGFAWHVMGLVHGYA
Ga0307308_1001334013300028884SoilMALRIATRLPRLVVVGVVLLLASATLAVGAAKRLTAVPEGAPAPVSAPTLVVPDLS
Ga0307304_1053576523300028885SoilMALRIATRLPRLVIVGAVLLLASATLAVGAAKRLTAVPSGAPAPVAVATLVVPDVSGQAFVFSK
Ga0307473_1117427313300031820Hardwood Forest SoilMALRIATRLPRLAIVGVVLLLASATLAVGAAKRMTAVPEGAPAPVPAATLVVPDLSGQAFVFAKGTLE
Ga0307471_10368272423300032180Hardwood Forest SoilMALRIASRLPRLAIVGVVLLLASATLAVGAAKRLTAVPQGAPAPVSAPTLVVPDLSGQAFVFAKGTLEDTGFAWHVMGPVHGY
Ga0307472_10206883723300032205Hardwood Forest SoilMALRIALRLPRLAIVGVVLLLASATLAVGAAKRMAAVPQGAPAPVATPTVTVPDITGQAFVFAKGTLEDAGLAWKVVGSVHGYAA

 ⦗Top⦘


Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.