Metagenome / Metatranscriptome Family F077126

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F077126
Family Type	Metagenome / Metatranscriptome
Number of Sequences	117
Average Sequence Length	58 residues
Representative Sequence	TADVLAALQAVRSVMAAERGTDVSQVPPPDLVRSRLAAFGASLQGLREPDDGRPY
Number of Associated Samples	92
Number of Associated Scaffolds	117

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	0.93 %
% of genes near scaffold ends (potentially truncated)	91.45 %
% of genes from short scaffolds (< 2000 bps)	87.18 %
Associated GOLD sequencing projects	87
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.57

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (71.795 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (50.427 % of family members)
Environment Ontology (ENVO)	Unclassified (64.103 % of family members)
Earth Microbiome Project Ontology (EMPO)	Unclassified (49.573 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 48.19% β-sheet: 0.00% Coil/Unstructured: 51.81%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.57
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.57
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 117 Family Scaffolds
PF00884	Sulfatase	15.38
PF09851	SHOCT	14.53
PF02627	CMD	5.13
PF12868	DUF3824	2.56
PF04185	Phosphoesterase	1.71
PF06271	RDD	1.71
PF00392	GntR	0.85

COG ID	Name	Functional Category	% Frequency in 117 Family Scaffolds
COG0599	Uncharacterized conserved protein YurZ, alkylhydroperoxidase/carboxymuconolactone decarboxylase family	General function prediction only [R]	5.13
COG2128	Alkylhydroperoxidase family enzyme, contains CxxC motif	Inorganic ion transport and metabolism [P]	5.13
COG1714	Uncharacterized membrane protein YckC, RDD family	Function unknown [S]	1.71
COG3511	Phospholipase C	Cell wall/membrane/envelope biogenesis [M]	1.71

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	71.79 %
Unclassified	root	N/A	28.21 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	71.79 %
Unclassified	root	N/A	28.21 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	71.79 %
Unclassified	root	N/A	28.21 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	70.09 %
Unclassified	root	N/A	28.21 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.85 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	70.09 %
Unclassified	root	N/A	28.21 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	0.85 %

Name	Rank	Taxonomy	Distribution
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	58.12 %
Unclassified	root	N/A	28.21 %
Thermoleophilia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	0.85 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	28.21 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	2.56 %
Solirubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	0.85 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.85 %
Syntrophorhabdales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophorhabdales	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	28.21 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2.56 %
Syntrophorhabdaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophorhabdales → Syntrophorhabdaceae	0.85 %
Conexibacteraceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae	0.85 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	28.21 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2.56 %
Syntrophorhabdus	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophorhabdales → Syntrophorhabdaceae → Syntrophorhabdus	0.85 %
Conexibacter	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter	0.85 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	28.21 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2.56 %
unclassified Syntrophorhabdus	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophorhabdales → Syntrophorhabdaceae → Syntrophorhabdus → unclassified Syntrophorhabdus	0.85 %
Conexibacter woesei	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter → Conexibacter woesei	0.85 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	28.21 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2.56 %
Syntrophorhabdus sp. PtaB.Bin047	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophorhabdales → Syntrophorhabdaceae → Syntrophorhabdus → unclassified Syntrophorhabdus → Syntrophorhabdus sp. PtaB.Bin047	0.85 %
Conexibacter woesei	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter → Conexibacter woesei	0.85 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.85 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300005332\|Ga0066388_101108298	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1341	Open in IMG/M
3300005435\|Ga0070714_100460820	Not Available	1208	Open in IMG/M
3300005435\|Ga0070714_100901122	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	859	Open in IMG/M
3300005435\|Ga0070714_102234988	Not Available	532	Open in IMG/M
3300005467\|Ga0070706_100435920	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1220	Open in IMG/M
3300005713\|Ga0066905_101303489	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	653	Open in IMG/M
3300005764\|Ga0066903_103720644	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	820	Open in IMG/M
3300006791\|Ga0066653_10605401	Not Available	557	Open in IMG/M
3300006854\|Ga0075425_101438129	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	779	Open in IMG/M
3300006914\|Ga0075436_101018386	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	622	Open in IMG/M
3300010043\|Ga0126380_11509971	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	595	Open in IMG/M
3300010046\|Ga0126384_11138849	Not Available	717	Open in IMG/M
3300010046\|Ga0126384_11672718	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	601	Open in IMG/M
3300010048\|Ga0126373_12743843	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	550	Open in IMG/M
3300010152\|Ga0126318_10393126	Not Available	514	Open in IMG/M
3300010154\|Ga0127503_10742365	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	930	Open in IMG/M
3300010159\|Ga0099796_10395463	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	605	Open in IMG/M
3300010337\|Ga0134062_10627163	Not Available	557	Open in IMG/M
3300010358\|Ga0126370_10194498	Not Available	1526	Open in IMG/M
3300010358\|Ga0126370_10673882	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	905	Open in IMG/M
3300010358\|Ga0126370_10948720	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	781	Open in IMG/M
3300010361\|Ga0126378_12661719	Not Available	571	Open in IMG/M
3300010366\|Ga0126379_12053269	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	674	Open in IMG/M
3300010376\|Ga0126381_102583669	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	727	Open in IMG/M
3300010880\|Ga0126350_10943306	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1046	Open in IMG/M
3300011120\|Ga0150983_13091174	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	954	Open in IMG/M
3300011270\|Ga0137391_10372049	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1225	Open in IMG/M
3300011271\|Ga0137393_11497038	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	564	Open in IMG/M
3300012209\|Ga0137379_11145527	Not Available	684	Open in IMG/M
3300012356\|Ga0137371_10917360	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	666	Open in IMG/M
3300012971\|Ga0126369_12770511	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	574	Open in IMG/M
3300012989\|Ga0164305_11081308	Not Available	687	Open in IMG/M
3300016319\|Ga0182033_10422029	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1132	Open in IMG/M
3300016341\|Ga0182035_10376940	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1186	Open in IMG/M
3300016371\|Ga0182034_12006940	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	511	Open in IMG/M
3300016387\|Ga0182040_10430839	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1041	Open in IMG/M
3300016404\|Ga0182037_10552970	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	971	Open in IMG/M
3300016422\|Ga0182039_11989982	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	534	Open in IMG/M
3300016445\|Ga0182038_10884862	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	786	Open in IMG/M
3300021560\|Ga0126371_12935556	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	578	Open in IMG/M
3300022709\|Ga0222756_1014145	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter → Conexibacter woesei	955	Open in IMG/M
3300022724\|Ga0242665_10262368	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	592	Open in IMG/M
3300025915\|Ga0207693_10182987	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Syntrophorhabdales → Syntrophorhabdaceae → Syntrophorhabdus → unclassified Syntrophorhabdus → Syntrophorhabdus sp. PtaB.Bin047	1649	Open in IMG/M
3300025915\|Ga0207693_10385546	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1096	Open in IMG/M
3300025928\|Ga0207700_10620193	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	963	Open in IMG/M
3300027826\|Ga0209060_10046563	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2106	Open in IMG/M
3300027874\|Ga0209465_10030251	Not Available	2547	Open in IMG/M
3300028906\|Ga0308309_10241743	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1507	Open in IMG/M
3300031057\|Ga0170834_103654029	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	535	Open in IMG/M
3300031543\|Ga0318516_10521056	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	681	Open in IMG/M
3300031543\|Ga0318516_10658770	Not Available	596	Open in IMG/M
3300031544\|Ga0318534_10509269	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	687	Open in IMG/M
3300031546\|Ga0318538_10298955	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	867	Open in IMG/M
3300031546\|Ga0318538_10620199	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	587	Open in IMG/M
3300031561\|Ga0318528_10332297	All Organisms → cellular organisms → Bacteria	816	Open in IMG/M
3300031564\|Ga0318573_10062990	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1837	Open in IMG/M
3300031564\|Ga0318573_10413313	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	725	Open in IMG/M
3300031668\|Ga0318542_10065894	Not Available	1683	Open in IMG/M
3300031679\|Ga0318561_10107236	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1473	Open in IMG/M
3300031679\|Ga0318561_10538623	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	643	Open in IMG/M
3300031682\|Ga0318560_10168352	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1164	Open in IMG/M
3300031719\|Ga0306917_10199969	Not Available	1512	Open in IMG/M
3300031719\|Ga0306917_10711132	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	789	Open in IMG/M
3300031719\|Ga0306917_11359323	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	548	Open in IMG/M
3300031724\|Ga0318500_10072894	Not Available	1512	Open in IMG/M
3300031724\|Ga0318500_10136629	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1145	Open in IMG/M
3300031744\|Ga0306918_10411462	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1054	Open in IMG/M
3300031744\|Ga0306918_10784131	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	744	Open in IMG/M
3300031751\|Ga0318494_10491469	Not Available	715	Open in IMG/M
3300031769\|Ga0318526_10042488	Not Available	1709	Open in IMG/M
3300031769\|Ga0318526_10286126	Not Available	674	Open in IMG/M
3300031795\|Ga0318557_10277520	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	768	Open in IMG/M
3300031796\|Ga0318576_10549014	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	545	Open in IMG/M
3300031798\|Ga0318523_10042878	Not Available	2101	Open in IMG/M
3300031799\|Ga0318565_10002841	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	6192	Open in IMG/M
3300031819\|Ga0318568_10537141	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	729	Open in IMG/M
3300031821\|Ga0318567_10138508	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1340	Open in IMG/M
3300031832\|Ga0318499_10216256	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	746	Open in IMG/M
3300031833\|Ga0310917_10786907	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	642	Open in IMG/M
3300031859\|Ga0318527_10417091	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	572	Open in IMG/M
3300031860\|Ga0318495_10126967	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1149	Open in IMG/M
3300031879\|Ga0306919_10348415	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1131	Open in IMG/M
3300031880\|Ga0318544_10098698	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1099	Open in IMG/M
3300031890\|Ga0306925_11378389	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	697	Open in IMG/M
3300031893\|Ga0318536_10149323	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1187	Open in IMG/M
3300031896\|Ga0318551_10732253	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	574	Open in IMG/M
3300031941\|Ga0310912_10513348	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	934	Open in IMG/M
3300031945\|Ga0310913_10271677	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1193	Open in IMG/M
3300031945\|Ga0310913_10984123	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	591	Open in IMG/M
3300031946\|Ga0310910_10126033	Not Available	1934	Open in IMG/M
3300031947\|Ga0310909_10079540	Not Available	2596	Open in IMG/M
3300031981\|Ga0318531_10399978	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	621	Open in IMG/M
3300032001\|Ga0306922_10494892	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1303	Open in IMG/M
3300032001\|Ga0306922_11259169	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	750	Open in IMG/M
3300032008\|Ga0318562_10242915	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1045	Open in IMG/M
3300032008\|Ga0318562_10555458	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	664	Open in IMG/M
3300032009\|Ga0318563_10604329	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	591	Open in IMG/M
3300032010\|Ga0318569_10287027	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	765	Open in IMG/M
3300032039\|Ga0318559_10170035	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	995	Open in IMG/M
3300032043\|Ga0318556_10751442	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	507	Open in IMG/M
3300032052\|Ga0318506_10281243	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	737	Open in IMG/M
3300032054\|Ga0318570_10074258	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1452	Open in IMG/M
3300032055\|Ga0318575_10026890	Not Available	2481	Open in IMG/M
3300032063\|Ga0318504_10417033	Not Available	640	Open in IMG/M
3300032065\|Ga0318513_10638168	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	522	Open in IMG/M
3300032094\|Ga0318540_10443438	Not Available	627	Open in IMG/M
3300032094\|Ga0318540_10632893	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	515	Open in IMG/M
3300032261\|Ga0306920_102073749	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	794	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	98.29%
Host-Associated	Host-Associated	1.71%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	96.58%
Aquatic	Environmental → Aquatic	1.71%
Plants	Host-Associated → Plants	1.71%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	96.58%
Freshwater	Environmental → Aquatic → Freshwater	1.71%
Rhizosphere	Host-Associated → Plants → Rhizosphere	1.71%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	85.47%
Loam	Environmental → Terrestrial → Soil → Loam	11.11%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	1.71%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	1.71%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	66.67%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	17.95%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	5.98%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	5.13%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	1.71%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	1.71%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	0.85%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	50.43%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	15.38%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	10.26%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	4.27%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	3.42%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	3.42%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	2.56%
Soil	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil	1.71%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	1.71%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.85%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	0.85%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.85%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	0.85%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.85%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	0.85%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	0.85%
Boreal Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil	0.85%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006791	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_102	Environmental	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006914	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5	Host-Associated	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010152	Soil microbial communities from Oklahoma, USA to study soil gas exchange rates - GP-OK-ARM metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010154	Soil microbial communities from Willow Creek, Wisconsin, USA - WC-WI-TBF metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010159	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_3	Environmental	Open in IMG/M
3300010337	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09082015	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010880	Boreal forest soil eukaryotic communities from Alaska, USA - C5-1 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental	Open in IMG/M
3300011270	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaG	Environmental	Open in IMG/M
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012356	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaG	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300022709	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-O (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300022724	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-17-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300027826	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen06_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027874	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio (SPAdes)	Environmental	Open in IMG/M
3300028906	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)	Environmental	Open in IMG/M
3300031057	Oak Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031544	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f26	Environmental	Open in IMG/M
3300031546	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f23	Environmental	Open in IMG/M
3300031561	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f26	Environmental	Open in IMG/M
3300031564	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f21	Environmental	Open in IMG/M
3300031668	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f23	Environmental	Open in IMG/M
3300031679	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f23	Environmental	Open in IMG/M
3300031682	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f22	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031724	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f20	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031751	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f24	Environmental	Open in IMG/M
3300031769	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f24	Environmental	Open in IMG/M
3300031770	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f17	Environmental	Open in IMG/M
3300031795	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f19	Environmental	Open in IMG/M
3300031796	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f24	Environmental	Open in IMG/M
3300031798	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f19	Environmental	Open in IMG/M
3300031799	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f21	Environmental	Open in IMG/M
3300031819	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f21	Environmental	Open in IMG/M
3300031821	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f20	Environmental	Open in IMG/M
3300031831	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f20	Environmental	Open in IMG/M
3300031832	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f25	Environmental	Open in IMG/M
3300031833	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178	Environmental	Open in IMG/M
3300031859	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f25	Environmental	Open in IMG/M
3300031860	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f25	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031880	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f25	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031893	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f28	Environmental	Open in IMG/M
3300031896	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f19	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300031981	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f25	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032008	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f18	Environmental	Open in IMG/M
3300032009	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f19	Environmental	Open in IMG/M
3300032010	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f22	Environmental	Open in IMG/M
3300032039	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f21	Environmental	Open in IMG/M
3300032043	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f24	Environmental	Open in IMG/M
3300032052	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f19	Environmental	Open in IMG/M
3300032054	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f23	Environmental	Open in IMG/M
3300032055	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f23	Environmental	Open in IMG/M
3300032063	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f17	Environmental	Open in IMG/M
3300032065	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f20	Environmental	Open in IMG/M
3300032094	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f25	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0066388_1011082982	3300005332	Tropical Forest Soil	DLAQALYAMREAAPDEDKRMRAADVLAALQAVRSAMAAERGTDVSRVPPPEQVRSRLTAFRASLEALREPDDGMPY*
Ga0070714_1004608201	3300005435	Agricultural Soil	VRTAMAAERGTDVSRVPPPDQVRSRLQSFRAALQALREPDDRMPY*
Ga0070714_1009011222	3300005435	Agricultural Soil	QSVRSVMAAERGTDVTRVPPPEMVRSRLMAFSAALQGLRGTGDRMPY*
Ga0070714_1022349882	3300005435	Agricultural Soil	AMAAERGTDVSRVPPPDQVRSRLQSFRAALQALREPDDRMPY*
Ga0070706_1004359201	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	DVLAALQSVRSVMAAERGTDVSSVPPPDLVRSRLMAFGASLQGLRGPDDTGMPY*
Ga0066905_1013034892	3300005713	Tropical Forest Soil	SAMAAERGTDVSRVPPPEQVRSRLTAFRASLEALREPDDGMHY*
Ga0066903_1037206442	3300005764	Tropical Forest Soil	MRTADVLAALQSVRSVMAAERGTDVTRVPPPEMVRSRLMAFNAALQDLRAPDDGMPY*
Ga0066653_106054011	3300006791	Soil	RMRTADVLAALQSVRSVMAAERGTDVTSVPPPEMVRSRLMAFGAALQALRAPDDGMPY*
Ga0075425_1014381293	3300006854	Populus Rhizosphere	ALQAVRSAMAAERGADVSQVPPPDLVRSRLMSFGASLQALREPDDGTPY*
Ga0075436_1010183861	3300006914	Populus Rhizosphere	LQSVRSVMAAERGTDVTRVPPPEMVRSRLMAFSAALQGLRGTDDRMPY*
Ga0126380_115099712	3300010043	Tropical Forest Soil	ADVLAALQAVRSAMAAERGTDVSRVPPPEQVRSRLTAFRASLEALREPDDGRPYDGRPY*
Ga0126384_111388492	3300010046	Tropical Forest Soil	MREAAPDEDKRMRAADVLAALQAVRSAMAAERGTDVSQVPPPDLVSSRLMSFRAALQALREPDDGMPY*
Ga0126384_116727181	3300010046	Tropical Forest Soil	DEDKRMRTDDVLVALQGVRSVMAAERGADVSQVPPPDLVRSRLMSFGASLQALREPDDGMTY*
Ga0126373_127438432	3300010048	Tropical Forest Soil	DVLAALQAVRSAMAAERGADVSQVPPPDLVRSRLMSFGASLQALREPDDGRPY*
Ga0126318_103931262	3300010152	Soil	ALQAVRSAMAAERGADVSQVPPPDLVRSRLMSFGASLQALRDPDDGMRY*
Ga0127503_107423653	3300010154	Soil	LAALQAVRSVMAAERGTDVSQVPPPDLVRSRLAAFGASLQGLREPDDGRPY*
Ga0099796_103954632	3300010159	Vadose Zone Soil	QAVRSVMAAERGRDVASVPPPEQVRSRLMAFGAAIQQLREPDDGLPY*
Ga0134062_106271631	3300010337	Grasslands Soil	DKRMCTADVLAALQSVRSVMAAERGTDVTSVPPPEMVRSRLMAFGAALQALRAPDDGMPY
Ga0126370_101944982	3300010358	Tropical Forest Soil	ALQAVRSAMAAERGTDVSRVPPPEQVRSRLTAFRASLEALREPDDGMPY*
Ga0126370_106738822	3300010358	Tropical Forest Soil	AAPDEDKRMRTADVLAALQAVRSAMAAERGTDVSQVPPPDLVRSRLASFRAALQALREPDDGRPYDGRPY*
Ga0126370_109487201	3300010358	Tropical Forest Soil	MAAERGTDVTRVPPPEMVRSRLMAFSAALQGLRGIDDRMPY*
Ga0126378_126617192	3300010361	Tropical Forest Soil	DLAQTLYAMREAAPDEDKRMRSDDVLVALQSVRSAMAAERGTDVSQVPPPDLVRSRLASFGAALQALREPDDRMPY*
Ga0126379_120532691	3300010366	Tropical Forest Soil	DEDKRMRTADVLAALQAVRSAMAAERGTDVSQVPPPDLVRSRLASFGAALQALREPDDRMPY*
Ga0126381_1025836692	3300010376	Tropical Forest Soil	LAALQAVRSAMAAERGTDVSQVPPPDLVRSRLASFGASLQALREPDDKMPY*
Ga0126350_109433064	3300010880	Boreal Forest Soil	APDEDKRMRTADVLAALQAVRAVMAAERGPDVASVPPPEQVRSRLMAFDAAIQQLREPDDGLPY*
Ga0150983_130911743	3300011120	Forest Soil	LAALQAVRSAMAAERGPDVGSVPPPEQVRSRLMAFGAALQGLREPDERPPY*
Ga0137391_103720493	3300011270	Vadose Zone Soil	QSVRSVMAAERGADVSSVPPPDLVRSRLMAFGASLQGLRGPDDGLPY*
Ga0137393_114970383	3300011271	Vadose Zone Soil	RSVMAAERGRDVASVPPPEQVRSRLVAFGAAIQQLREPDDGLPY*
Ga0137379_111455271	3300012209	Vadose Zone Soil	AAPNEDKRMRTADVLAALQGVRSVMAAERGTDVASVPPPELVRSRLMAFGAALQGLRESDERQPY*
Ga0137371_109173601	3300012356	Vadose Zone Soil	GPDVASVPPPEQVRGRLMSFGAALQGLREPDERQPY*
Ga0126369_127705112	3300012971	Tropical Forest Soil	LQSVRSVMAAERGTDVTRVPPPEMVRSRLMAFGASLQGLRAPGDGMPY*
Ga0164305_110813082	3300012989	Soil	TADVLAALQAVRSVMAAERGTDVSQVPPPDLVRSRLAAFGASLQGLREPDDGRPY*
Ga0182036_105649762	3300016270	Soil	SAMAAERGSDVSQAPPPDLVRSRLMSFGASLQALREPDDGMRH
Ga0182033_104220291	3300016319	Soil	SVRRVMAAERGTDVAAVPPPEEVRGRLQAFRASLQALREPDDGRPYNGRPY
Ga0182035_103769401	3300016341	Soil	APDEDKRMRTADVLAALQAVRTAMAAERGTDISQVPPPDLVHSRLQSFRAALQALREPDGGVPY
Ga0182034_120069402	3300016371	Soil	AAERGTDVTRVPPPEMVRSRLMAFGAALQGLRAPDDGMPY
Ga0182040_104308392	3300016387	Soil	AQALYAMREAAPDEDKRMRTADVLAALQAIRSAMAAERGRDVSQVPPPDLVHSRLAAFGASLQGLREPDDGRPYDGRPY
Ga0182037_105529702	3300016404	Soil	SVRSVMAAERGTDVTRVPPPEIVRSRLMAFGTSLQGLRAPDDGMPY
Ga0182039_119899822	3300016422	Soil	DEDKRMRTADVLAALQSVRSVMAAERGTDVTRVPPPEMVRSRLMAFGASLQGLRAPDDGMPY
Ga0182038_108848621	3300016445	Soil	QALYAMREAAPDEDKRMRTADVLAALQSVRSAMAAERGTDVSQVPPADLVRSRLMSFGASLQALREPDDGRPY
Ga0126371_129355562	3300021560	Tropical Forest Soil	AALQAVRSAMAAERGTDVSQVPPPDLVRSRLASFRAALQALREPDDGRPYDGRPY
Ga0222756_10141453	3300022709	Soil	AALQAVRSVMAAERGPDVTRVPPPEQVRSRLMAFGAALQGLREPDERTPY
Ga0242665_102623682	3300022724	Soil	DVLAALQAVRSVMAAERGTDVSAVPPPEQVRSRLVAFGAALQELRQPDDGMPY
Ga0207693_101829871	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	ADVLAALQSVRSVMAAERGTDVTRVPPPEMVRSRLMAFSAALQGLRGTDDRMPY
Ga0207693_103855462	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	RSVMAAERGTDVTRVPPPEQVRSRLMAFGAALQELRGPDTGRPY
Ga0207700_106201932	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	AMREAAPDEDKRMRTADVLAALQAVRSVMAAERGTDVTRVPPPEQVRSRLMAFGAALQELRGPDTGRPY
Ga0209060_100465631	3300027826	Surface Soil	TDVSRVPPPDMVRSRLMAFGASLQGLRGPDDTGTGMPY
Ga0209465_100302512	3300027874	Tropical Forest Soil	EDKRMRTADVLAALQAVRTAMAAERGTDVSQVPPPDLVRSRLAAFGASLQGLREPDDGRPYDGRPY
Ga0308309_102417431	3300028906	Soil	DLGQALYAMREAAPDEDKRMRTADVLAALQAVRSVMAAERGTDVSAVPPPEQVRSRLVAFGAALQELRQPDDGMPY
Ga0170834_1036540292	3300031057	Forest Soil	AERGRDVASVPPPEQVRSRLMAFGAALQELRPPDDGLPY
Ga0318516_105210562	3300031543	Soil	QALYAMREAAPDEDKRMRTADVLAALQSVRSVMAAERGTDVTRVPPPEMVRSRLMAFGAALQGLRAPDDGMPY
Ga0318516_106587701	3300031543	Soil	AMREGAPDEDKRMRAADVLAALQSVRRVMAAERGTDVAAVPPPEEVRGRLMAFGASLQALRQPDDGMPY
Ga0318534_105092691	3300031544	Soil	DVLAALQSVRSVMAAERGPDVSQVPPPDLVRSRLMAFGASLQALREPDDGMRY
Ga0318538_102989551	3300031546	Soil	RTADVLAALQAVRSAMAAERGTDVAQVPPPDLVRSRLASFRASLQALREPDNRTPY
Ga0318538_106201991	3300031546	Soil	MREAAPDEDKRMRTADVLAALQGVRSAMAAERGTDVSQVPPPDLVRSRLASFGASLQALREPDDKMPY
Ga0318528_103322972	3300031561	Soil	LTQTLYTMREAAPDEDKRMHTDDVLAALQAVRSAMAAERGSDVSQAPPPDLVRSRLMSFGASLQALREPDDGMRH
Ga0318573_100629901	3300031564	Soil	ALGSVRRVMAAERGTDVAAVPPPEEVRGRLQAFRASLQALREPDDGRPYNGRPY
Ga0318573_104133132	3300031564	Soil	RAALQAVRSAMAAERGTDVAQVPPPDLVRSRLASFRASLQALREPDNRTPY
Ga0318542_100658942	3300031668	Soil	LYAMREAAPDEDKRMRTADVLAALQAVRSAMAAERGTDVTQVPPPDLVRSRLAAFGASLQGLREPDDGRPYDGRPY
Ga0318561_101072361	3300031679	Soil	LQSVRSAMAAERGTDVSQVPPPDLVRSRLMSFGASLQALREPDDGRPY
Ga0318561_105386232	3300031679	Soil	PDEDKRMRAADVLAALGSVRRVMAAERGTDVAAVPPPEEVRGRLNAFWASLQALREPDDRTPY
Ga0318560_101683522	3300031682	Soil	IQRRADDLGQALYAMREAAPDEDKRMRTADVLAALQSVRSVMAAERGTDVTRVPPPEMVRSRLMAFSAALQGLRGADDRMPY
Ga0306917_101999691	3300031719	Soil	REAAPDEDKRMRTADVLAALQAIRSAMAAERGRDVSQVPPPDLVHSRLAAFGASLQGLREPDDGRPYDGRPY
Ga0306917_107111321	3300031719	Soil	DKRMRAADVLAALGSVRRVMAAERGTDVAAVPPPEEVRGRLQTFRASLQALREPDDGRPYNGRPY
Ga0306917_113593231	3300031719	Soil	MRSDDVLVALQSVRSAMAAERGTDVSQVPPPDLVRSRLMSFGASLQALREPDEGRPY
Ga0318500_100728941	3300031724	Soil	DKRMRSDDVLVALQSVRSAMAAERGTDVSQVPPPDLVRSRLMSFGASLQALRDPDEGRPY
Ga0318500_101366291	3300031724	Soil	APDEDKRMRTADVLAALQAVRSAMAAERGTDVSQVPPPDLVRSRLAAFGASLQGLREPDDGRPYDGRPY
Ga0318500_102442672	3300031724	Soil	IRSAMAAERGRDVSQVPPPDLVHSRLAAFGASLQGLREPDDGRPYDGRPY
Ga0306918_104114622	3300031744	Soil	LAALQSVRSVMAAERGTDVTRVPPPEMVRSRLMAFSAALQGLRGADDRMPY
Ga0306918_107841311	3300031744	Soil	ALQSVRSAMAAERGTDVSQVPPPDLVRSRLMSFGASLQALRDPDEGRPY
Ga0318494_104914691	3300031751	Soil	IQRRADDLGQALYAMREAAPDEDKRMRTADVLAALQAVRTAMAAERGTDISQVPPPDLVHSRLQSFRAALQALREPDGGVPY
Ga0318526_100424881	3300031769	Soil	RMRSDDVLAALQSVRSVMAAERGPDVSQVPPPDLVRSRLMAFGASLQALREPDDGMRY
Ga0318526_102861261	3300031769	Soil	PDEDKRMRIADVLAALQAVRTAMAAERGTDISQVPPPDLVHSRLQSFRAALQALREPDGGVPY
Ga0318521_100481791	3300031770	Soil	AMAAERGRDVSQVPPPDLVHSRLAAFGASLQGLREPDDGRPYDGRPY
Ga0318557_102775201	3300031795	Soil	AQTLYAMREAAPDEDKRMRSDDVLAALQSVRSAMAAERGTDVSQVPPADLVRSRLMSFGASLQALREPDDGRPY
Ga0318576_101060642	3300031796	Soil	RDVSQVPPPDLVHSRLAAFGASLQGLREPDDGRPYDGRPY
Ga0318576_105490142	3300031796	Soil	DKRMRSDDVLAALQSVRSAMAAERGTDVSQVPPADLVRSRLMSFGASLQALREPDDGRPY
Ga0318523_100428782	3300031798	Soil	AMREAAPDEDKRMRSDDVLAALQSVRSAMAAERGTDVSQVPPPDLVRSRLMSFGASLQALREPDDGRPY
Ga0318565_100028418	3300031799	Soil	QAVRSAMAAERGTDVSQVPPPDLVHSRLAAFGASLQGLREPDDGRPYDGRPY
Ga0318568_105371412	3300031819	Soil	GQALYAMREGAPDDDKRMRAADVLAALGSARRVMAAERGTDVAAVPPPEEVRGRLQAFWASLQALREPDDRSMPY
Ga0318567_100158181	3300031821	Soil	GRDVSQVPPPDLVHSRLAAFGASLQGLREPDDGRPYDGRPY
Ga0318567_101385082	3300031821	Soil	LYAMREAAPDEDKRMRTADVLAALQSVRSVMAAERGTDVTRVPPPEMVRSRLMAFSAALQGLRGADDRMPY
Ga0318564_104360521	3300031831	Soil	AAERGTDVSQVPPPDLVRSRLMSFGASLQALREPDDGRPY
Ga0318499_102162561	3300031832	Soil	DKRMRAADVLAALGSVRRVMAAERGTDVAAVPPPEEVRGRLQAFRASLQALREPDDGRPYNGRPY
Ga0318499_103322202	3300031832	Soil	AERTAERGTDVTQVPPPDLVRSRLAAFGASLQGLREPDDGRPYDGRPY
Ga0310917_107869071	3300031833	Soil	TQTLYAMREAAPDEDKRMRSDDVLVALQSVRSAMAAERGTDVSQVPPPDLVRSRLMSFGASLQALREPDEGRPY
Ga0318527_104170912	3300031859	Soil	LYAMREAAPDEDKRMRTADVLAALQAIRSAMAAERGTDVTQVPPPDLVRSRLAAFGASLQGLREPDDGRPYDGRPY
Ga0318495_100841941	3300031860	Soil	RSAMAAERGRDVSQVPPPDLVHSRLAAFGASLQGLREPDDGRPYDGRPY
Ga0318495_101269671	3300031860	Soil	LAALQAVRSAMAAERGTDVTQVPPPDLVRSRLAAFGASLQGLREPDDGRPYDGRPY
Ga0306919_103484151	3300031879	Soil	LQAVRTAMAAERDTDVSQVPPPEQVRSRLQSFRAALQALREPDGGVPY
Ga0318544_100986982	3300031880	Soil	ALQSVRSAMAAERGTDVSQVPPPDLVRSRLMSFGASLQALREPDDGRPY
Ga0306925_113783891	3300031890	Soil	APDEDKRMRTADVLAALQSVRSVMAAERGTDVTRVPPPEMVRSRLMAFGAALQGLRAPDDGMPY
Ga0318536_101493231	3300031893	Soil	IQRRADDLAQALYAMREAAPDEDKRMRTADVLAALQSVRSVMAAERGTDVTRVPPPEMVRSRLMAFGAALQGLRAPDDGMPY
Ga0318551_107322531	3300031896	Soil	RGTDVTRVPPPEMVRSRLMAFSAALQGLRGADDRMPY
Ga0310912_105133482	3300031941	Soil	MRTADVLAALQGVRSAMAAERGTDVSQVPPPDLVRSRLASFGASLQALREPDDKMPY
Ga0310913_102716772	3300031945	Soil	AMAAERGTDVSQVPPPDLVHSRLAAFGASLQGLREPDDGRPYDGRPY
Ga0310913_109841232	3300031945	Soil	QSVRSAMAAERGTDVSQVPPPDLVRSRLMSFGASLQALREPDDGRPY
Ga0310910_101260331	3300031946	Soil	AAERGTDVTRVPPPEMVRSRLMAFSAALQGLRGADDRMPY
Ga0310909_100795401	3300031947	Soil	EAAPDEDKRMRSDDVLAALQSVRSAMAAERGTDVSQVPPPDLVRSRLMSFGASLQALREPDDGRPY
Ga0318531_103999782	3300031981	Soil	PDEDKRMRSDDVLVALQSVRSAMAAERGTDVSQVPPPDLVRSRLMSFGASLQALREPDDGRPY
Ga0306922_104948922	3300032001	Soil	RSAMAAERGTDVSQVPPPDLVHSRLAAFGASLQGLREPDDGRPYDGRPY
Ga0306922_112591692	3300032001	Soil	DVLAALQAIRSAMAAERGTDVTQVPPPDLVRSRLAAFGASLQGLREPDDGRPYDGRPY
Ga0318562_101083292	3300032008	Soil	GTDVSQVPPPDLVHSRLAAFGASLQGLREPDDGRPYDGRPY
Ga0318562_102429151	3300032008	Soil	REEAPDEDKRMRAADVLAALGSVRRVMAAERGTDVAAVPPPEEVRGRLQAFRASLQALREPDDGRPYNGRPY
Ga0318562_105554582	3300032008	Soil	IQRRADDLAQTLYAMREAAPDEDKRMRTADVLAALQAVRSAMAAERGTDVAQVPPPDLVRSRLASFRASLQALREPDNRTPY
Ga0318563_106043291	3300032009	Soil	AAPDEDKRMRSDDVLAALQSVRSVMAAERGPDVSQVPPPDLVRSRLMAFGASLQALREPDDGMRY
Ga0318569_102870272	3300032010	Soil	LQSVRRVMAAERGTDVAAVPPPEEVRGRLNAFWASLQALREPDDRTPY
Ga0318559_101700351	3300032039	Soil	DKRMRTADVLAALQAVRSAMAAERGTDVSQVPPPDLVHSRLAAFGASLQGLREPDDGRPYDGRPY
Ga0318556_107514422	3300032043	Soil	QTLYGMREAAPDEDKRMRSDDVLAALQSVRSVMAAERGPDVSQVPPPDLVRSRLMAFGASLQALREPDDGMRY
Ga0318506_102812432	3300032052	Soil	RADDLTQTLYAMREAAPDEDKRMRSDDVLVALQSVRSAMAAERGTDVSQVPPADLVRSRLMSFGASLQALREPDDGRPY
Ga0318570_100742581	3300032054	Soil	LAQALYAMREAAPDEDKRMRTADVLAALQAVRSAMAAERGTDVSQVPPPDLVHSRLAAFGASLQGLREPDDGRPYDGRPY
Ga0318575_100268902	3300032055	Soil	PDEDKRMRTADVLAALQAIRSAMAAERGRDVSQVPPPDLVHSRLAAFGASLQGLREPDDGRPYDGRPY
Ga0318504_104170331	3300032063	Soil	LYAMREGAPDEDKRMRAADVLAALQSVRRVMAAERGTDVAAVPPPEEVRGRLMAFGASLQALRQPDDGMPY
Ga0318513_106381681	3300032065	Soil	LYGMREAAPDEDKRMRSDDVLAALQSVRSVMAAERGPDVSQVPPPDLVRSRLMAFGASLQALREPDDGMRY
Ga0318540_104434381	3300032094	Soil	TADVLAALQAVRTAMAAERGTDISQVPPPDLVHSRLQSFRAALQALREPDGGVPY
Ga0318540_106328931	3300032094	Soil	MRAADVLAALGSVRRVMAAERGTDVAAVPPPEEVRGRLQTFRASLQALREPDDGRPYNGRPY
Ga0306920_1020737492	3300032261	Soil	RMRSDDVLVALQSVRSAMAAERGTDVSQVPPPDLVRSRLMSFGASLQALREPDDGRPY

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F077126

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences