Metagenome Family F077058

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F077058
Family Type	Metagenome
Number of Sequences	117
Average Sequence Length	59 residues
Representative Sequence	MADVENENEESLTCGVCRKVGQFTAPVSVILVFAPGMAKPYPLIPAEDYRVCSACDAIFT
Number of Associated Samples	96
Number of Associated Scaffolds	117

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	92.24 %
% of genes near scaffold ends (potentially truncated)	96.58 %
% of genes from short scaffolds (< 2000 bps)	88.03 %
Associated GOLD sequencing projects	84
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (61.538 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (32.479 % of family members)
Environment Ontology (ENVO)	Unclassified (42.735 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (52.137 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 10.00% β-sheet: 21.67% Coil/Unstructured: 68.33%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 117 Family Scaffolds
PF01136	Peptidase_U32	37.61
PF12392	DUF3656	14.53
PF00990	GGDEF	0.85
PF00528	BPD_transp_1	0.85

COG ID	Name	Functional Category	% Frequency in 117 Family Scaffolds
COG0826	23S rRNA C2501 and tRNA U34 5'-hydroxylation protein RlhA/YrrN/YrrO, U32 peptidase family	Translation, ribosomal structure and biogenesis [J]	37.61

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	62.39 %
Unclassified	root	N/A	37.61 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	62.39 %
Unclassified	root	N/A	37.61 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	61.54 %
Unclassified	root	N/A	37.61 %
Eukaryota	superkingdom	All Organisms → cellular organisms → Eukaryota	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	37.61 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	11.11 %
Sar	clade	All Organisms → cellular organisms → Eukaryota → Sar	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	37.61 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	10.26 %
Alveolata	clade	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	37.61 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	10.26 %
Dinophyceae	class	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	37.61 %
unclassified Deltaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria	9.40 %
Suessiales	order	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	37.61 %
Deltaproteobacteria bacterium RIFOXYA12_FULL_58_15	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium RIFOXYA12_FULL_58_15	5.13 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	4.27 %
Symbiodiniaceae	family	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales → Symbiodiniaceae	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	37.61 %
Deltaproteobacteria bacterium RIFOXYA12_FULL_58_15	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium RIFOXYA12_FULL_58_15	5.13 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	4.27 %
Symbiodinium	genus	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales → Symbiodiniaceae → Symbiodinium	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	37.61 %
Deltaproteobacteria bacterium RIFOXYA12_FULL_58_15	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium RIFOXYA12_FULL_58_15	5.13 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	4.27 %
unclassified Symbiodinium	no rank	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales → Symbiodiniaceae → Symbiodinium → unclassified Symbiodinium	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	37.61 %
Deltaproteobacteria bacterium RIFOXYA12_FULL_58_15	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium RIFOXYA12_FULL_58_15	5.13 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	4.27 %
Symbiodinium sp. CCMP2456	species	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales → Symbiodiniaceae → Symbiodinium → unclassified Symbiodinium → Symbiodinium sp. CCMP2456	0.85 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001686\|C688J18823_10069300	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	2446	Open in IMG/M
3300001686\|C688J18823_10692193	Not Available	649	Open in IMG/M
3300002561\|JGI25384J37096_10040244	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1812	Open in IMG/M
3300004153\|Ga0063455_100430116	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium RIFOXYA12_FULL_58_15	792	Open in IMG/M
3300005171\|Ga0066677_10023647	All Organisms → cellular organisms → Bacteria	2866	Open in IMG/M
3300005171\|Ga0066677_10029791	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	2604	Open in IMG/M
3300005177\|Ga0066690_10261629	Not Available	1162	Open in IMG/M
3300005178\|Ga0066688_10451637	Not Available	831	Open in IMG/M
3300005179\|Ga0066684_10804726	Not Available	621	Open in IMG/M
3300005181\|Ga0066678_10236859	Not Available	1177	Open in IMG/M
3300005184\|Ga0066671_10063418	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1923	Open in IMG/M
3300005184\|Ga0066671_10198734	All Organisms → cellular organisms → Bacteria	1204	Open in IMG/M
3300005330\|Ga0070690_101375333	All Organisms → cellular organisms → Bacteria	567	Open in IMG/M
3300005340\|Ga0070689_101961801	Not Available	535	Open in IMG/M
3300005440\|Ga0070705_101002312	Not Available	678	Open in IMG/M
3300005445\|Ga0070708_100446506	Not Available	1220	Open in IMG/M
3300005446\|Ga0066686_11136632	All Organisms → cellular organisms → Bacteria	500	Open in IMG/M
3300005467\|Ga0070706_100154964	All Organisms → cellular organisms → Bacteria	2139	Open in IMG/M
3300005518\|Ga0070699_100488585	All Organisms → cellular organisms → Bacteria	1118	Open in IMG/M
3300005536\|Ga0070697_100986318	Not Available	749	Open in IMG/M
3300005540\|Ga0066697_10173040	All Organisms → cellular organisms → Bacteria	1280	Open in IMG/M
3300005554\|Ga0066661_10118363	All Organisms → cellular organisms → Bacteria	1599	Open in IMG/M
3300005554\|Ga0066661_10204736	Not Available	1222	Open in IMG/M
3300005559\|Ga0066700_10146935	All Organisms → cellular organisms → Bacteria	1593	Open in IMG/M
3300005559\|Ga0066700_10816072	Not Available	627	Open in IMG/M
3300005561\|Ga0066699_10678273	Not Available	736	Open in IMG/M
3300005566\|Ga0066693_10373828	All Organisms → cellular organisms → Bacteria	576	Open in IMG/M
3300005566\|Ga0066693_10383563	Not Available	569	Open in IMG/M
3300005569\|Ga0066705_10157149	All Organisms → cellular organisms → Bacteria	1400	Open in IMG/M
3300005569\|Ga0066705_10235345	Not Available	1158	Open in IMG/M
3300005574\|Ga0066694_10417025	Not Available	630	Open in IMG/M
3300005764\|Ga0066903_105047818	All Organisms → cellular organisms → Bacteria	700	Open in IMG/M
3300006031\|Ga0066651_10585081	Not Available	593	Open in IMG/M
3300006046\|Ga0066652_100048412	All Organisms → cellular organisms → Bacteria	3182	Open in IMG/M
3300006800\|Ga0066660_10423300	All Organisms → cellular organisms → Bacteria	1106	Open in IMG/M
3300006806\|Ga0079220_11701141	All Organisms → cellular organisms → Bacteria	551	Open in IMG/M
3300006914\|Ga0075436_100760901	Not Available	720	Open in IMG/M
3300007076\|Ga0075435_100462156	All Organisms → cellular organisms → Bacteria	1095	Open in IMG/M
3300007255\|Ga0099791_10048253	All Organisms → cellular organisms → Bacteria	1903	Open in IMG/M
3300007258\|Ga0099793_10285623	Not Available	800	Open in IMG/M
3300007258\|Ga0099793_10637275	Not Available	535	Open in IMG/M
3300009012\|Ga0066710_101184445	All Organisms → cellular organisms → Bacteria	1183	Open in IMG/M
3300009089\|Ga0099828_10629835	All Organisms → cellular organisms → Bacteria	965	Open in IMG/M
3300009143\|Ga0099792_10896311	All Organisms → cellular organisms → Bacteria	587	Open in IMG/M
3300009792\|Ga0126374_11419231	All Organisms → cellular organisms → Bacteria	566	Open in IMG/M
3300010046\|Ga0126384_11369157	All Organisms → cellular organisms → Bacteria	659	Open in IMG/M
3300010321\|Ga0134067_10206046	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales → Symbiodiniaceae → Symbiodinium → unclassified Symbiodinium → Symbiodinium sp. CCMP2456	725	Open in IMG/M
3300010321\|Ga0134067_10456257	All Organisms → cellular organisms → Bacteria	522	Open in IMG/M
3300010325\|Ga0134064_10062838	Not Available	1159	Open in IMG/M
3300011269\|Ga0137392_11148522	All Organisms → cellular organisms → Bacteria	634	Open in IMG/M
3300011270\|Ga0137391_10280981	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium RIFOXYA12_FULL_58_15	1438	Open in IMG/M
3300012096\|Ga0137389_11375314	All Organisms → cellular organisms → Bacteria	601	Open in IMG/M
3300012203\|Ga0137399_11302385	All Organisms → cellular organisms → Bacteria	611	Open in IMG/M
3300012205\|Ga0137362_10027416	All Organisms → cellular organisms → Bacteria → Proteobacteria	4474	Open in IMG/M
3300012205\|Ga0137362_11254345	All Organisms → cellular organisms → Bacteria	626	Open in IMG/M
3300012349\|Ga0137387_10483085	Not Available	899	Open in IMG/M
3300012359\|Ga0137385_10850967	Not Available	756	Open in IMG/M
3300012362\|Ga0137361_10242252	All Organisms → cellular organisms → Bacteria	1641	Open in IMG/M
3300012469\|Ga0150984_109230862	All Organisms → cellular organisms → Bacteria	537	Open in IMG/M
3300012683\|Ga0137398_10676129	All Organisms → cellular organisms → Bacteria	717	Open in IMG/M
3300012685\|Ga0137397_11189523	All Organisms → cellular organisms → Bacteria	550	Open in IMG/M
3300012918\|Ga0137396_10747994	All Organisms → cellular organisms → Bacteria	720	Open in IMG/M
3300012918\|Ga0137396_10989541	All Organisms → cellular organisms → Bacteria	610	Open in IMG/M
3300012922\|Ga0137394_11174148	All Organisms → cellular organisms → Bacteria	631	Open in IMG/M
3300012923\|Ga0137359_11643755	Not Available	530	Open in IMG/M
3300012927\|Ga0137416_11136422	Not Available	702	Open in IMG/M
3300012927\|Ga0137416_11481476	All Organisms → cellular organisms → Bacteria	616	Open in IMG/M
3300012927\|Ga0137416_11566752	Not Available	599	Open in IMG/M
3300012927\|Ga0137416_12112407	All Organisms → cellular organisms → Bacteria	517	Open in IMG/M
3300012929\|Ga0137404_10093976	All Organisms → cellular organisms → Bacteria	2405	Open in IMG/M
3300012929\|Ga0137404_11439598	All Organisms → cellular organisms → Bacteria	637	Open in IMG/M
3300012929\|Ga0137404_12166633	Not Available	520	Open in IMG/M
3300012931\|Ga0153915_12232167	Not Available	641	Open in IMG/M
3300012944\|Ga0137410_10421972	All Organisms → cellular organisms → Bacteria	1078	Open in IMG/M
3300012944\|Ga0137410_11859655	All Organisms → cellular organisms → Bacteria	533	Open in IMG/M
3300012972\|Ga0134077_10585361	All Organisms → cellular organisms → Bacteria	503	Open in IMG/M
3300014157\|Ga0134078_10395616	Not Available	619	Open in IMG/M
3300014166\|Ga0134079_10381792	Not Available	650	Open in IMG/M
3300015052\|Ga0137411_1188035	All Organisms → cellular organisms → Bacteria	2650	Open in IMG/M
3300015054\|Ga0137420_1300734	All Organisms → cellular organisms → Bacteria	817	Open in IMG/M
3300015245\|Ga0137409_10490609	All Organisms → cellular organisms → Bacteria	1051	Open in IMG/M
3300015357\|Ga0134072_10242688	Not Available	645	Open in IMG/M
3300015358\|Ga0134089_10352055	All Organisms → cellular organisms → Bacteria	621	Open in IMG/M
3300018060\|Ga0187765_10760403	Not Available	642	Open in IMG/M
3300018433\|Ga0066667_10041324	All Organisms → cellular organisms → Bacteria	2700	Open in IMG/M
3300018433\|Ga0066667_11525988	Not Available	592	Open in IMG/M
3300026275\|Ga0209901_1081830	Not Available	665	Open in IMG/M
3300026309\|Ga0209055_1085262	Not Available	1296	Open in IMG/M
3300026309\|Ga0209055_1286916	All Organisms → cellular organisms → Bacteria	516	Open in IMG/M
3300026312\|Ga0209153_1045273	All Organisms → cellular organisms → Bacteria	1548	Open in IMG/M
3300026315\|Ga0209686_1025983	All Organisms → cellular organisms → Bacteria	2285	Open in IMG/M
3300026328\|Ga0209802_1246879	Not Available	617	Open in IMG/M
3300026331\|Ga0209267_1128699	Not Available	1061	Open in IMG/M
3300026333\|Ga0209158_1165444	Not Available	802	Open in IMG/M
3300026523\|Ga0209808_1068128	All Organisms → cellular organisms → Bacteria	1564	Open in IMG/M
3300026527\|Ga0209059_1205120	All Organisms → cellular organisms → Bacteria	666	Open in IMG/M
3300026532\|Ga0209160_1196689	Not Available	783	Open in IMG/M
3300026547\|Ga0209156_10203654	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium RIFOXYA12_FULL_58_15	942	Open in IMG/M
3300026548\|Ga0209161_10097398	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1780	Open in IMG/M
3300026550\|Ga0209474_10428261	All Organisms → cellular organisms → Bacteria	678	Open in IMG/M
3300026552\|Ga0209577_10776224	All Organisms → cellular organisms → Bacteria	536	Open in IMG/M
3300027655\|Ga0209388_1106790	All Organisms → cellular organisms → Bacteria	802	Open in IMG/M
3300027681\|Ga0208991_1127780	Not Available	756	Open in IMG/M
3300027738\|Ga0208989_10058736	Not Available	1326	Open in IMG/M
3300027875\|Ga0209283_10536422	Not Available	749	Open in IMG/M
3300027882\|Ga0209590_10162178	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium RIFOXYA12_FULL_58_15	1394	Open in IMG/M
3300027903\|Ga0209488_10020783	All Organisms → cellular organisms → Bacteria	4760	Open in IMG/M
3300027903\|Ga0209488_10796702	Not Available	670	Open in IMG/M
3300028536\|Ga0137415_11092731	Not Available	610	Open in IMG/M
3300031200\|Ga0307496_10001972	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium RIFOXYA12_FULL_58_15	2040	Open in IMG/M
3300031720\|Ga0307469_10123040	All Organisms → cellular organisms → Bacteria	1881	Open in IMG/M
3300032180\|Ga0307471_100109267	All Organisms → cellular organisms → Bacteria	2539	Open in IMG/M
3300032205\|Ga0307472_101484517	All Organisms → cellular organisms → Bacteria	661	Open in IMG/M
3300032205\|Ga0307472_101993289	All Organisms → cellular organisms → Bacteria	581	Open in IMG/M
3300033158\|Ga0335077_10922045	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	878	Open in IMG/M
3300034384\|Ga0372946_0347894	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium RIFOXYA12_FULL_58_15	719	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	97.44%
Host-Associated	Host-Associated	2.56%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	96.58%
Plants	Host-Associated → Plants	2.56%
Aquatic	Environmental → Aquatic	0.85%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	96.58%
Rhizosphere	Host-Associated → Plants → Rhizosphere	2.56%
Freshwater	Environmental → Aquatic → Freshwater	0.85%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	80.34%
Loam	Environmental → Terrestrial → Soil → Loam	13.68%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	2.56%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	1.71%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	0.85%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.85%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	41.88%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	33.33%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	5.98%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	5.13%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	4.27%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	2.56%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	1.71%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	1.71%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	0.85%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.85%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	0.85%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.85%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	32.48%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	29.91%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	6.84%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	5.13%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	4.27%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	3.42%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	3.42%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	1.71%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	1.71%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	1.71%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	1.71%
Freshwater Wetlands	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands	0.85%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.85%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.85%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.85%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.85%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	0.85%
Permafrost Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost Soil	0.85%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.85%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	0.85%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001686	Grasslands soil microbial communities from Hopland, California, USA	Environmental	Open in IMG/M
3300002561	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_40cm	Environmental	Open in IMG/M
3300004153	Grasslands soil microbial communities from Hopland, California, USA (version 2)	Environmental	Open in IMG/M
3300005171	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_126	Environmental	Open in IMG/M
3300005177	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139	Environmental	Open in IMG/M
3300005178	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137	Environmental	Open in IMG/M
3300005179	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133	Environmental	Open in IMG/M
3300005181	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127	Environmental	Open in IMG/M
3300005184	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_120	Environmental	Open in IMG/M
3300005330	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG	Environmental	Open in IMG/M
3300005340	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG	Environmental	Open in IMG/M
3300005440	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005446	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005540	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_146	Environmental	Open in IMG/M
3300005554	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110	Environmental	Open in IMG/M
3300005559	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149	Environmental	Open in IMG/M
3300005561	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148	Environmental	Open in IMG/M
3300005566	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_142	Environmental	Open in IMG/M
3300005569	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_154	Environmental	Open in IMG/M
3300005574	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_143	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006031	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Angelo_100	Environmental	Open in IMG/M
3300006046	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101	Environmental	Open in IMG/M
3300006800	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109	Environmental	Open in IMG/M
3300006806	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100	Environmental	Open in IMG/M
3300006914	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5	Host-Associated	Open in IMG/M
3300007076	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4	Host-Associated	Open in IMG/M
3300007255	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1	Environmental	Open in IMG/M
3300007258	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental	Open in IMG/M
3300009143	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2	Environmental	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010321	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09212015	Environmental	Open in IMG/M
3300010325	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_2_0_1 metaG	Environmental	Open in IMG/M
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental	Open in IMG/M
3300011270	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaG	Environmental	Open in IMG/M
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012349	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaG	Environmental	Open in IMG/M
3300012359	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012683	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz2.16 metaG	Environmental	Open in IMG/M
3300012685	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaG	Environmental	Open in IMG/M
3300012918	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaG	Environmental	Open in IMG/M
3300012922	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaG	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012931	Freshwater wetland microbial communities from Ohio, USA - Open water 3 Core 3 Depth 3 metaG	Environmental	Open in IMG/M
3300012944	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012972	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300014157	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_20cm_2_24_1 metaG	Environmental	Open in IMG/M
3300014166	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09182015	Environmental	Open in IMG/M
3300015052	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300015054	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300015245	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015357	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_5_0_1 metaG	Environmental	Open in IMG/M
3300015358	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300018060	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_10_MG	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300026275	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil DNA_2013-058 (SPAdes)	Environmental	Open in IMG/M
3300026309	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110 (SPAdes)	Environmental	Open in IMG/M
3300026312	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_120 (SPAdes)	Environmental	Open in IMG/M
3300026315	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_126 (SPAdes)	Environmental	Open in IMG/M
3300026328	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129 (SPAdes)	Environmental	Open in IMG/M
3300026331	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137 (SPAdes)	Environmental	Open in IMG/M
3300026333	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140 (SPAdes)	Environmental	Open in IMG/M
3300026523	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157 (SPAdes)	Environmental	Open in IMG/M
3300026527	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_151 (SPAdes)	Environmental	Open in IMG/M
3300026532	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153 (SPAdes)	Environmental	Open in IMG/M
3300026540	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134 (SPAdes)	Environmental	Open in IMG/M
3300026547	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124 (SPAdes)	Environmental	Open in IMG/M
3300026548	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155 (SPAdes)	Environmental	Open in IMG/M
3300026550	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145 (SPAdes)	Environmental	Open in IMG/M
3300026552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109 (SPAdes)	Environmental	Open in IMG/M
3300027655	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1 (SPAdes)	Environmental	Open in IMG/M
3300027681	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM3_M2 (SPAdes)	Environmental	Open in IMG/M
3300027738	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM3_M1 (SPAdes)	Environmental	Open in IMG/M
3300027875	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027882	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027903	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)	Environmental	Open in IMG/M
3300028536	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300031200	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 9_S	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300033158	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.1	Environmental	Open in IMG/M
3300034384	Forest soil microbial communities from Eldorado National Forest, California, USA - SNFC_MG_KNG_2.2	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
C688J18823_100693003	3300001686	Soil	MVESDETLTCSHCRKSGNFTAPVSVILVFAPGLTKPYPLIPAEDYRV
C688J18823_106921931	3300001686	Soil	MVESDSSLTCGQCRKSGNFTAPVSVILVFAPGLTKPYPLIPAEEYRVCGA
JGI25384J37096_100402441	3300002561	Grasslands Soil	MADVENENEESLTCGVCRKVGQFTAPVSVILVFAPGMAKPYPLIPAEDYRVCSAC
Ga0063455_1004301161	3300004153	Soil	MVESDETLTCSHCRKSGNFTAPVSVILVFAPGLIKPYPLIPAEDYRVCGACNAIFTLV
Ga0066677_100236472	3300005171	Soil	MADVENENEETLTCGVCRKVGQFTAPVSVILVFAPAMAKPYPLIPAEDYRVCSACDAIFTLVNRAVDAHPTTRAAGPWSR
Ga0066677_100297912	3300005171	Soil	MADVENENEESLTCGVCRKVGQFTAPVSVILVFASGMAKPYPLIPAEDYRVCSACDAIFTLVNRAVEAHPTTRA
Ga0066690_102616291	3300005177	Soil	MADVENENEESLTCGVCRKVGQFTAPVSVILVFAPGMAKPYPLIP
Ga0066688_104516372	3300005178	Soil	MEPTEETLTCGQCRKSGTFTAPVSVILLFAPALSKPYPLIPAEDYRVC
Ga0066684_108047261	3300005179	Soil	MAENDDTLTCGQCRKSGTFTAPVSVILVFAPGLAKPYPLIPAEDYRVCGACD
Ga0066678_102368591	3300005181	Soil	MADVENENEESLTCGVCRKVGQFTAPVSVILVFAPGMAKPYPLIPAEDYRVCSACDAIFTLVNRAV
Ga0066671_100634181	3300005184	Soil	MVESDSSLTCGQCRKSGNFTAPVSVILVFAPGLTKPYPLIPAEEYRVCGACNAIFTLVTRATEA
Ga0066671_101987341	3300005184	Soil	MSDVENKDETLTCGVCRRAGQFTAPVSVILVFAPGMAKPYPLIPAEDYRVCGACDAIFTLVNRAVEAHPTTRSAGPWT
Ga0070690_1013753332	3300005330	Switchgrass Rhizosphere	MSDVENENEETLTCGVCRKVGQFTAPVSVILVFAPGMAKPYPLIPAEDYRVCSACDAIFTLVNRAVEA
Ga0070689_1019618011	3300005340	Switchgrass Rhizosphere	MSDVENENEETLTCGVCRKVGQFTAPVSVILVFAPGMAKP
Ga0070705_1010023122	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	MSDVENENEETLTCGVCRKVGQFTAPVSVILVFAPGMAKPYPLIPAEDY
Ga0070708_1004465061	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MADVENENEESLTCGVCRKVGQFTAPVSVILVFAPGMAKPYPLFPAEDYRVCS
Ga0066686_111366321	3300005446	Soil	MADVENENEESLTCGVCRKVGQFTAPVSVILVFAPGMAKPYPLIPAEDYRVCSACDAIFT
Ga0070706_1001549642	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	MSDVENESEEALTCGVCRKVGQFTAPVSVILVFAPGMAKPYPLIPAEDYRVCGAC
Ga0070699_1004885852	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	MADVENENEEGLTCGVCRKVGQFTAPVSVILVFAPAMAKPYPLIPAEDYRVCSACDAIFTLVNRAVEAHPTTRAAGPWTRAIV
Ga0070697_1009863181	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	MSDVENESEEALTCGVCRKVGQFTAPVSVILVFAPGMAKPYPLIPAEDYRVCGACDAIFTLVNRAVEAHPTTR
Ga0066697_101730402	3300005540	Soil	MEPTEETLTCGQCRKSGTFTAPVSVILLFAPALSKPYPLIPAEDYRVCGACDAIFTLVNRAAEAHPTTRQAGPWSRAIIV
Ga0066661_101183631	3300005554	Soil	MADVENENEESLTCGVCRKVGQFTAPVSVILVFAPGMAKPYPL
Ga0066661_102047362	3300005554	Soil	MEGGAKSQDLMCGACRKTGTFTAPVSVILLFAPGLERPYPLIPAEDYCVCGACDAVFTLIDRASQAHP
Ga0066700_101469352	3300005559	Soil	MRQMEETEETLTCGQCRKSGTFTAPVSVILLFAPGLSKPYPLIPAEDYRVCGACDAIFTL
Ga0066700_108160721	3300005559	Soil	MSDVENESEEALTCGVCRKVGQFTAPVSVILVFAPGMAKPYPLIPAEDYRVCGACDAIFTLVNRAVE
Ga0066699_106782731	3300005561	Soil	MSDVENKDETLTCGVCRRAGQFTAPVSVILVFAPGMAKPYPLIPAEDYRV
Ga0066693_103738282	3300005566	Soil	MSDVENKDETLTCGVCRRAGQFTAPVSVILVFAPGMAKPYPLIPAEDY
Ga0066693_103835631	3300005566	Soil	MEASEETLTCGQCRKSGTFTAPVSVILLFAPGLAKPYPLIPAEDYRVCGACDAIF
Ga0066705_101571492	3300005569	Soil	MSDVENAETLTCGVCRKTGSFTAPVSVILVFAPGMAKPYPLIPAEDYRVCGACDAIFTLVNR
Ga0066705_102353451	3300005569	Soil	MEPTEETLTCGQCRKSGTFTAPVSVILLFAPALSKPYPLIPAEDYRVCGACDAIFTLVNR
Ga0066694_104170251	3300005574	Soil	MVESDSSLTCGQCRKSGNFTAPVSVILVFAPGLTKPYPLIPAEEYRVC
Ga0066903_1050478182	3300005764	Tropical Forest Soil	MSDVENENEETLTCGVCRKVGQFTAPVSVILVFAPGMAKPYPL
Ga0066651_105850812	3300006031	Soil	MSDVENENEETLTCGVCRKVGQFTAPVSVILVFAPGMTKPYPLIPAEDYRVCSAC
Ga0066652_1000484123	3300006046	Soil	MSDVENENEETLTCGVCRKVGQFTSPVSVILVFAPAMAKPYPLIPAEDYRVCGACDAIFTLVNRAV
Ga0066660_104233001	3300006800	Soil	MEQTEETLTCGQCRKSGTFTAPVSVILLFAPGLSKPYPLIPAEDYRVCGACDAIFTLVNRAADAHPTTRQAGPW
Ga0079220_117011411	3300006806	Agricultural Soil	MSDVENENEETLTCGVCRKVGQFTSPVSVILVFAPGMAKPYPLIPAEDYRVCGA
Ga0075436_1007609011	3300006914	Populus Rhizosphere	MEQTEETLTCGQCRKSGTFTAPVSVILLFAPGRSKPYPLIPAEDYRVC
Ga0075435_1004621562	3300007076	Populus Rhizosphere	MEQTEETLTCGQCRKSGTFTAPVSVILLFAPALSKPYPLIPAEDYRVCG
Ga0099791_100482532	3300007255	Vadose Zone Soil	MSDVENESEEALTCGVCRKVGQFTAPVSVILVFAPGMAKPYPLIPAEDYRVCGACD
Ga0099793_102856231	3300007258	Vadose Zone Soil	MPETEESLTCGQCRKSGTFTAPVSVILLFAPGLGKPYPLIPAEDYR
Ga0099793_106372752	3300007258	Vadose Zone Soil	MADVENESDESLSCGVCRKVGQFTAPVSVILVFAPGMTKPYPLIP
Ga0066710_1011844451	3300009012	Grasslands Soil	MEPTEETLTCGQCRKSGTFTAPVSVILLFAPALSKPYPLIPAEDYRVCGACDAIFTLVNRAVDAHPTTRAAGPW
Ga0099828_106298351	3300009089	Vadose Zone Soil	MADVEQEETLTCGICRKTGTFTAPVSVILVFAPGMPKPYPLIPAEDYRVCGA
Ga0099792_108963111	3300009143	Vadose Zone Soil	MADVENENGESLTCGVCRKVGQFTAPVSVILVFAPGMAKPYP
Ga0126374_114192312	3300009792	Tropical Forest Soil	MSDVENENEETLTCGVCRKVGQFTAPVSVILVFAPGMAKPYP
Ga0126384_113691572	3300010046	Tropical Forest Soil	MSDVENEETLTCGVCRKTGSFTAPVSVILVFAPGMAKPYPLIPAEDY
Ga0134067_102060461	3300010321	Grasslands Soil	MADVENENEESLTCGVCRKVGQFTAPVSVILVFAPGMAKPYPLIPAEDYRV
Ga0134067_104562572	3300010321	Grasslands Soil	MADVENENEETLTCGVCRKVGQFTAPVSVILVFAPAMAKPYPLIPAEDYRVCSACDAIFTLV
Ga0134064_100628382	3300010325	Grasslands Soil	MADVENENEETLTCGVCRKVGQFTAPVSVILVFAPAMAKPYPLIPAEDYRVCSACDAIFTLVNRAVD
Ga0137392_111485221	3300011269	Vadose Zone Soil	MEQTEETLTCGQCRKSGTFTAPVSVILLFAPALSKPYPLIPAEDYRVCGACDAIFTLVNRAADAHPTT
Ga0137391_102809811	3300011270	Vadose Zone Soil	MTDVENEETLTCGVCRKTGNFTAPVSVILVFAPGMAKPYPLIPAEDYRV
Ga0137389_113753141	3300012096	Vadose Zone Soil	MSEVEKEETLTCGICRKTGTFTAPVSVILVFAPGMPKPYPLIPAEDYRVCGAC
Ga0137399_113023852	3300012203	Vadose Zone Soil	MADVENESDESLSCGVCRKVGQFTAPVSVILVFAPGMTKPYPLIPAEDYRVCSACDAVFTLVNRAVEAHPT
Ga0137362_100274161	3300012205	Vadose Zone Soil	MADVENENEEGPTCGVCRKVGQFTAPVSVILVFAPGMAK
Ga0137362_112543452	3300012205	Vadose Zone Soil	MADVENENEEGPTCGVCRKVGQFTAPVSVILVFAPGMAKPYPLIPAEDYRVCSACDA
Ga0137387_104830852	3300012349	Vadose Zone Soil	MADVENENEESLTCGVCRKVGQFTAPVSVILVFAPGMAKPYPLIPAEDYRVCSACDAIFTLVNRAVEAHPT
Ga0137385_108509672	3300012359	Vadose Zone Soil	MSDVENEETLTCGVCRKVGQFTAPVSVILVFAPGMAKPYPLIPAEDYRVC
Ga0137361_102422521	3300012362	Vadose Zone Soil	VADVENEGDESLSCGVCRKVGQFTAPVSVILVFAPGMTKPYPLIPAEDYRVCSACDAVFT
Ga0150984_1092308622	3300012469	Avena Fatua Rhizosphere	MVESDETLTCSQCRKSGNFTAPVSVILVFAPGLTKPYPLIPAEDYRVCGACNAIFTLVTRATEAHPTTRDAGAW
Ga0137398_106761292	3300012683	Vadose Zone Soil	MEETEEALTCGQCRKSGTFTAPVSVILLFAPALPKQYPLIPAEDYRVCGACDAIFTLVNRAAD
Ga0137397_111895232	3300012685	Vadose Zone Soil	VLKVKGERVKLMSDVENESEEALTCGVCRKVGQFTAPVSVILVFAPGMAKPYPLIPAEDYRVCGACD
Ga0137396_107479942	3300012918	Vadose Zone Soil	MADVENESDESLSCGVCRKVGQFTAPVSVILVFAPGMPKPYPLIPAEDYRVCSACDAVFTLVNRAVEAHPTTRAAGPW
Ga0137396_109895412	3300012918	Vadose Zone Soil	MADVENESDESLSCGVCRKVGQFTAPVSVILVFAPGMTKPYPLIPAEDYRVCSACDAVFTLVNRAVEAHPTTRAAGPW
Ga0137394_111741482	3300012922	Vadose Zone Soil	MSDVDENAEPLTCGVCRKTGSFTAPVSVILVFAPGMAKPYPLIPAEDYRVCGACDAIFTLVNRAVEAHPTTRSAGPW
Ga0137359_116437551	3300012923	Vadose Zone Soil	MSDVENESEEALTCGVCRKVGQFTAPVSVILVFAPGMAKPYPLIPA
Ga0137416_111364222	3300012927	Vadose Zone Soil	MEQTEESVTCGQCRKTGTFTAPVSVILLFAPAHSKPYPLI
Ga0137416_114814762	3300012927	Vadose Zone Soil	MADVENESDESLSCGVCRKVGQFTAPVSVILVFAPGMTKPYPLIPAEDYRVCSACDAVFTLVNRAVEAHPTTR
Ga0137416_115667522	3300012927	Vadose Zone Soil	MADVENESDESLSCGVCRKVGQFTAPVSVILVFAPGMTKP
Ga0137416_121124071	3300012927	Vadose Zone Soil	MADVENESDESLSCGVCRKVGQFTAPVSVILVFAPGMPKPYPLI
Ga0137404_100939761	3300012929	Vadose Zone Soil	MSDVENESEEALTCGVCRKVGQFTAPVSVILVFAPGMAKPYPLIPAEDYRVCGACDAIFT
Ga0137404_114395981	3300012929	Vadose Zone Soil	MADVENESDEGLSCGVCRKVGQFTAPVSVILVFAPGMPKPYPLIPAEDYRV*
Ga0137404_121666332	3300012929	Vadose Zone Soil	MADVENENGESLTCGVCRKVGQFTAPVSVILVFAPGMAKPYPLI
Ga0153915_122321672	3300012931	Freshwater Wetlands	MSDVEDESTEPLTCGVCRKVGEFTAPVSVILVFAPGMA
Ga0137410_104219722	3300012944	Vadose Zone Soil	MADVENESDESLSCGVCRKVGQFTAPVSVILVFAPGMTKPYPLIPAEDYRVCSACDAVFTLVNRAVEAHPTTRAA
Ga0137410_118596552	3300012944	Vadose Zone Soil	VLKVKGERVKLMSDVENESEEALTCGVCRKVGQFTAPVSVILVFAPGMAKPYPLIPAEDYRVCGACDAIFTLVNRAVEAHPTTRAAGPWTR
Ga0134077_105853612	3300012972	Grasslands Soil	MADVENENEESLTCGVCRKVGQFTAPVSVILVFAPGMAKPYPLIPAEDYRVCSACDAIFTLVNR
Ga0134078_103956161	3300014157	Grasslands Soil	MSDVENENPETLTCGVCRKTGQFTAPVSVILVFAPGMVKPYPLIPAEDY
Ga0134079_103817921	3300014166	Grasslands Soil	MADVENENEETLTCGVCRKVGQFTAPVSVILVFAPAMAKPYPLIPAEDYRVCSACDA
Ga0137411_11880352	3300015052	Vadose Zone Soil	MADVENESDESLSCGVCRKVGQFTAPVSVILVFAPGMTKPYPL
Ga0137420_13007342	3300015054	Vadose Zone Soil	MADVENESDESLSCGVCRKVGQFTAPVSVILVFAPGMPKPYPLIPAEDYRVCSACDAVFTLVNRAVEAHPTTRAAGPWT
Ga0137409_104906091	3300015245	Vadose Zone Soil	MADVENESDEGLSCGVCRKVGQFTAPVSVILVFAPGMPKPYPLIPAEDYRVCSACDAVFTLVNRAVEAHPTTRAAGPWTRAWSGAPPRRGSPA*
Ga0134072_102426881	3300015357	Grasslands Soil	MADVENENEETLTCGVCRKVGQFTAPVSVILVFAPAMAKPYPLIPAEDYRVCSA
Ga0134089_103520552	3300015358	Grasslands Soil	MADVENENEETLTCGVCRKVGQFTAPVSVILVFAPAMAKPYPMIPAEDYRVCSACDAIFTLVNRAVDAHPTTRAAGPWSRATQR*
Ga0187765_107604032	3300018060	Tropical Peatland	MAAEEDDKSGGELSCGVCRKTGQFTAPVSVILVFAPGMAKPYPLIPAEDYRVCGACDAIFTLVNR
Ga0066667_100413241	3300018433	Grasslands Soil	MADVENENEESLTCGVCRKVGQFTAPVSVILVFAPGMAKPYPLIPAEDYRVCSACDAIFTLVNRAVDAHPTTRAAGPWSR
Ga0066667_115259881	3300018433	Grasslands Soil	MSDVDENAEPLTCGVCRKTGSFTAPVSVILVFAPGMAKPYPLIPA
Ga0209901_10818302	3300026275	Permafrost Soil	MTDEEKNDETLTCGVCRKTGQFTAPVSVILVFAPGMS
Ga0209055_10852621	3300026309	Soil	MADVENENEESLTCGVCRKVGQFTAPVSVILVFASGMAKPY
Ga0209055_12869161	3300026309	Soil	MEQTEETLTCGQCRKSGTFTAPVSVILLFAPGLSKPYPLIPAEDYRVCGACDAIFTLVNRAADAHPTTRQAGPWSRAII
Ga0209153_10452732	3300026312	Soil	MADVENENEESLTCGVCRKVGQFTAPVSVILVFAPGMAKPYPLIPAEDYRVCSACDAIFTLVNRAVDAHPTTR
Ga0209686_10259831	3300026315	Soil	MADVENENEETLTCGVCRKVGQFTAPVSVILVFAPAMAKPYPLIPAEDYRVCS
Ga0209802_12468791	3300026328	Soil	MADVENENEESLTCGVCRKVGQFTAPVSVILVFAPGMA
Ga0209267_11286991	3300026331	Soil	MEQTEETLTCGQCRKSGTFTAPVSVILLFAPGLSKPYPLIPAEDYRVCGACDAIFTLV
Ga0209158_11654442	3300026333	Soil	MADVENENEESLTCGVCRKVGQFTAPVSVILVFAPGMAKPYPLIPAEDYRVCSACDAIFTLVNRAVEAHPTTRAA
Ga0209808_10681282	3300026523	Soil	MADVENENEESLTCGVCRKVGQFTAPVSVILVFAPGMAKPYPLIPAEDYRVCSACDAIFTLVNRAVDAHPTTRAA
Ga0209059_12051202	3300026527	Soil	MEETEETLTCGQCRKSGTFTAPVSVILLFAPGLAKPYPLIPAEDYRVCGACDAIFTLVNRAVDAHPTTRAAGPWSRAIVVF
Ga0209160_11966892	3300026532	Soil	MADVENENGESLTCGVCRKVGQFTAPVSVILVFAPGMAKPYPLIPAEDYRVCSACDAIFTLVNRAVDA
Ga0209376_11942042	3300026540	Soil	MEPTEETLTCGQCRKSGTFTAPVSVILLFAPALSKPYPLIPAED
Ga0209156_102036541	3300026547	Soil	MSDVENAETLTCGVCRKTGSFTAPVSVILVFAPGMAKPYPLIPAEDYRVCGACDAIFTLVNRAVEAHPTTRQAGPWTR
Ga0209161_100973982	3300026548	Soil	MSDVENAETLTCGVCRKTGSFTAPVSVILVFAPGMAKPYPLIPAEDYRVCGACDAIFT
Ga0209474_104282612	3300026550	Soil	MEPTEETLTCGQCRKSGTFTAPVSVILLFAPALSKPYPLIPAEDYRVCGACDAIFT
Ga0209577_107762241	3300026552	Soil	MSDVENAETLTCGVCRKTGSFTAPVSVILVFAPGMAKPYPLIPAEDYRVCGACDAIFTLVNRAVEAHPTT
Ga0209388_11067901	3300027655	Vadose Zone Soil	MADVENESDESLSCGVCRKVGQFTAPVSVILVFAPGMTK
Ga0208991_11277801	3300027681	Forest Soil	MPETEESLTCGQCRKSGTFTAPVSVILLFAPGLGKPYPLIPAEDYRVCGACDAIFTLVNRAVDAHPTTRAAG
Ga0208989_100587361	3300027738	Forest Soil	MADVENESDESLSCGVCRKVGQFTAPVSVILVFAPGMTKPYPLIPA
Ga0209283_105364222	3300027875	Vadose Zone Soil	MADVEQEETLTCGICRKTGTFTAPVSVILVFAPGMPKPYPLIPAEDYRVCGACDAIFTLV
Ga0209590_101621781	3300027882	Vadose Zone Soil	MADVEQEETLTCGICRKTGTFTAPVSVILVFAPGMPKPYPLIPAEDYRVCGACDAIFTLVNRAVEAHPTTRSAGPWSRA
Ga0209488_100207834	3300027903	Vadose Zone Soil	MEETEETLTCGQCRKSGTFTAPVSVILLFAPGLSKPYPLIPAEDYRVCGACDAIFTLVNRAA
Ga0209488_107967022	3300027903	Vadose Zone Soil	MADVENENGESLTCGVCRKVGQFTAPVSVILVFAPGMAKPYPLIPAEDYRVCSACDAIFTLV
Ga0137415_110927311	3300028536	Vadose Zone Soil	MEQSEESLTCGQCRKTGTFTAPVSVILLFAPALSKPYPLIPAEDYRVCG
Ga0307496_100019722	3300031200	Soil	MAGGEEKSETLMCGSCRRSGTFTTPVSVILLFAPGLERPYPLIPAEDYRVCGACDAVFTLIDRACAAHPMTRSAGPWSR
Ga0307469_101230401	3300031720	Hardwood Forest Soil	MEQTEETLTCGQCRKSGTFTAPVSVILLFAPGLSKPYPLIPAEDY
Ga0307471_1001092671	3300032180	Hardwood Forest Soil	MEQTEETLTCGQCRKSGTFTAPVSVILLFAPGLTKPYPLIPAEDYRVCGACDAIFTLVNRAADAHPTTRQAGPWTRAIIVF
Ga0307472_1014845172	3300032205	Hardwood Forest Soil	MSDVENENEETLTCGVCRKVGQFTAPVSVILVFAPGMAKPYPLIPAEDYRVCGACDAIFTLVNRAVEAHPTTRAAGPWTRAIV
Ga0307472_1019932891	3300032205	Hardwood Forest Soil	MEPTEETLTCGQCRKSGTFTAPVSVILLFAPQLSKPYPLIPAEDYRVCGACDAIFTLVNR
Ga0335077_109220451	3300033158	Soil	METEAEPTCGRCRKTGEFSPPVSVVLLFAPGLSAPYPLIPGEEYCVCEACDAIERFVSGAAE
Ga0372946_0347894_509_718	3300034384	Soil	MEETEETLTCGQCRKSGTFTAPVSVILLFAPGLSKPYPLIPAEDYRVCGACDAIFTLVNRAAEAHPTTRQ

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F077058

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences