NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome Family F077040

Metagenome Family F077040

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F077040
Family Type Metagenome
Number of Sequences 117
Average Sequence Length 45 residues
Representative Sequence MITETLELLSKIKKPPKKASKELKFAFGNDYLPFSFRDMIRHLKKLV
Number of Associated Samples 61
Number of Associated Scaffolds 117

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 53.85 %
% of genes near scaffold ends (potentially truncated) 52.99 %
% of genes from short scaffolds (< 2000 bps) 77.78 %
Associated GOLD sequencing projects 41
AlphaFold2 3D model prediction No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Unclassified (82.906 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Environmental → Aquatic → Marine → Coastal → Unclassified → Aqueous
(59.829 % of family members)
Environment Ontology (ENVO) Unclassified
(76.923 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Saline → Water (saline)
(79.487 % of family members)



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Multiple Sequence Alignments

Select alignment to view:      


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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 65.96%    β-sheet: 0.00%    Coil/Unstructured: 34.04%
Feature Viewer
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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 117 Family Scaffolds
PF14550Peptidase_S78_2 4.27
PF04466Terminase_3 1.71
PF09206ArabFuran-catal 0.85
PF16677GP3_package 0.85

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 117 Family Scaffolds
COG1783Phage terminase large subunitMobilome: prophages, transposons [X] 1.71


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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
UnclassifiedrootN/A82.91 %
All OrganismsrootAll Organisms17.09 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300000101|DelMOSum2010_c10073436Not Available1558Open in IMG/M
3300000101|DelMOSum2010_c10088278Not Available1339Open in IMG/M
3300000116|DelMOSpr2010_c10003163Not Available9444Open in IMG/M
3300000116|DelMOSpr2010_c10136829Not Available859Open in IMG/M
3300005613|Ga0074649_1002452Not Available19693Open in IMG/M
3300005613|Ga0074649_1083787Not Available1211Open in IMG/M
3300005613|Ga0074649_1090038Not Available1143Open in IMG/M
3300006025|Ga0075474_10000879All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage12152Open in IMG/M
3300006027|Ga0075462_10207075Not Available588Open in IMG/M
3300006027|Ga0075462_10263793Not Available509Open in IMG/M
3300006802|Ga0070749_10079497Not Available1960Open in IMG/M
3300006802|Ga0070749_10082586Not Available1918Open in IMG/M
3300006802|Ga0070749_10099367Not Available1721Open in IMG/M
3300006802|Ga0070749_10168210Not Available1268Open in IMG/M
3300006802|Ga0070749_10211254Not Available1109Open in IMG/M
3300006802|Ga0070749_10238573Not Available1033Open in IMG/M
3300006802|Ga0070749_10343341Not Available831Open in IMG/M
3300006802|Ga0070749_10687578Not Available547Open in IMG/M
3300006810|Ga0070754_10078579All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → unclassified Phycisphaerae → Phycisphaerae bacterium1669Open in IMG/M
3300006810|Ga0070754_10199168Not Available934Open in IMG/M
3300006810|Ga0070754_10342010Not Available664Open in IMG/M
3300006916|Ga0070750_10053362Not Available1952Open in IMG/M
3300006916|Ga0070750_10203950Not Available874Open in IMG/M
3300006916|Ga0070750_10252246Not Available766Open in IMG/M
3300006916|Ga0070750_10475564Not Available514Open in IMG/M
3300006919|Ga0070746_10053809All Organisms → Viruses → Predicted Viral2092Open in IMG/M
3300006919|Ga0070746_10412186Not Available604Open in IMG/M
3300007236|Ga0075463_10007622Not Available3640Open in IMG/M
3300007344|Ga0070745_1231723Not Available673Open in IMG/M
3300007344|Ga0070745_1247476Not Available646Open in IMG/M
3300007344|Ga0070745_1348255Not Available520Open in IMG/M
3300007345|Ga0070752_1317008Not Available591Open in IMG/M
3300007345|Ga0070752_1356415Not Available548Open in IMG/M
3300007538|Ga0099851_1023852Not Available2470Open in IMG/M
3300007538|Ga0099851_1028568Not Available2238Open in IMG/M
3300007538|Ga0099851_1075163All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → unclassified Phycisphaerae → Phycisphaerae bacterium1305Open in IMG/M
3300007538|Ga0099851_1124520Not Available972Open in IMG/M
3300007540|Ga0099847_1086225Not Available964Open in IMG/M
3300007540|Ga0099847_1142548All Organisms → cellular organisms → Bacteria715Open in IMG/M
3300007540|Ga0099847_1172404Not Available638Open in IMG/M
3300007540|Ga0099847_1197096Not Available588Open in IMG/M
3300007540|Ga0099847_1204496Not Available575Open in IMG/M
3300007542|Ga0099846_1052769Not Available1538Open in IMG/M
3300007542|Ga0099846_1059644All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → unclassified Phycisphaerae → Phycisphaerae bacterium1438Open in IMG/M
3300007542|Ga0099846_1283780Not Available569Open in IMG/M
3300007640|Ga0070751_1022100Not Available3033Open in IMG/M
3300007960|Ga0099850_1266253Not Available657Open in IMG/M
3300009079|Ga0102814_10042136Not Available2557Open in IMG/M
3300009086|Ga0102812_10603062Not Available602Open in IMG/M
3300009149|Ga0114918_10089467Not Available1937Open in IMG/M
3300009149|Ga0114918_10112844Not Available1669Open in IMG/M
3300009149|Ga0114918_10238195All Organisms → Viruses → Predicted Viral1040Open in IMG/M
3300009495|Ga0115571_1025834Not Available2933Open in IMG/M
3300009507|Ga0115572_10030000All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage3638Open in IMG/M
3300009507|Ga0115572_10097788Not Available1767Open in IMG/M
3300010316|Ga0136655_1051407Not Available1288Open in IMG/M
3300010316|Ga0136655_1254852Not Available522Open in IMG/M
3300010368|Ga0129324_10239498Not Available726Open in IMG/M
3300010368|Ga0129324_10284051Not Available654Open in IMG/M
3300013010|Ga0129327_10207268Not Available991Open in IMG/M
3300013010|Ga0129327_10207801Not Available990Open in IMG/M
3300017697|Ga0180120_10114399Not Available1164Open in IMG/M
3300017697|Ga0180120_10194664Not Available842Open in IMG/M
3300021378|Ga0213861_10135936Not Available1414Open in IMG/M
3300021389|Ga0213868_10289761Not Available942Open in IMG/M
3300022050|Ga0196883_1000110All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage8380Open in IMG/M
3300022053|Ga0212030_1000294All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses → Prokaryotic dsDNA virus sp.3457Open in IMG/M
3300022053|Ga0212030_1006082Not Available1381Open in IMG/M
3300022053|Ga0212030_1024181Not Available829Open in IMG/M
3300022053|Ga0212030_1026508All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → unclassified Phycisphaerae → Phycisphaerae bacterium796Open in IMG/M
3300022063|Ga0212029_1017263Not Available946Open in IMG/M
3300022065|Ga0212024_1006798Not Available1596Open in IMG/M
3300022072|Ga0196889_1021101Not Available1355Open in IMG/M
3300022167|Ga0212020_1051565Not Available698Open in IMG/M
3300022178|Ga0196887_1023817Not Available1783Open in IMG/M
3300022187|Ga0196899_1031505All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → unclassified Phycisphaerae → Phycisphaerae bacterium1857Open in IMG/M
3300022200|Ga0196901_1030451Not Available2107Open in IMG/M
3300022200|Ga0196901_1067823Not Available1296Open in IMG/M
(restricted) 3300023210|Ga0233412_10028960Not Available2213Open in IMG/M
3300024262|Ga0210003_1029869Not Available3073Open in IMG/M
3300024262|Ga0210003_1050264Not Available2132Open in IMG/M
3300024262|Ga0210003_1113664Not Available1211Open in IMG/M
3300024433|Ga0209986_10148843Not Available1213Open in IMG/M
3300025543|Ga0208303_1004307Not Available5023Open in IMG/M
3300025543|Ga0208303_1012955Not Available2522Open in IMG/M
3300025543|Ga0208303_1040842Not Available1177Open in IMG/M
3300025543|Ga0208303_1104728Not Available592Open in IMG/M
3300025626|Ga0209716_1015737Not Available3223Open in IMG/M
3300025647|Ga0208160_1013434Not Available2720Open in IMG/M
3300025647|Ga0208160_1052778All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → unclassified Phycisphaerae → Phycisphaerae bacterium1150Open in IMG/M
3300025647|Ga0208160_1138839Not Available599Open in IMG/M
3300025652|Ga0208134_1036965Not Available1661Open in IMG/M
3300025671|Ga0208898_1038959All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → unclassified Phycisphaerae → Phycisphaerae bacterium1841Open in IMG/M
3300025759|Ga0208899_1048637Not Available1830Open in IMG/M
3300025759|Ga0208899_1176552Not Available702Open in IMG/M
3300025769|Ga0208767_1029886All Organisms → Viruses → Predicted Viral2835Open in IMG/M
3300025769|Ga0208767_1135628Not Available920Open in IMG/M
3300025803|Ga0208425_1087412Not Available738Open in IMG/M
3300025849|Ga0209603_1034761Not Available2876Open in IMG/M
3300025849|Ga0209603_1056717Not Available2005Open in IMG/M
3300025853|Ga0208645_1077414All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → unclassified Phycisphaerae → Phycisphaerae bacterium1456Open in IMG/M
3300025889|Ga0208644_1074017Not Available1773Open in IMG/M
3300025889|Ga0208644_1169356Not Available980Open in IMG/M
3300027751|Ga0208304_10287799Not Available576Open in IMG/M
3300027917|Ga0209536_100815571Not Available1155Open in IMG/M
3300027917|Ga0209536_101670499Not Available771Open in IMG/M
3300027917|Ga0209536_103357115All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → unclassified Phycisphaerae → Phycisphaerae bacterium506Open in IMG/M
3300031539|Ga0307380_10305037All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → unclassified Phycisphaerae → Phycisphaerae bacterium1475Open in IMG/M
3300031565|Ga0307379_10498780Not Available1139Open in IMG/M
3300031565|Ga0307379_10615984Not Available991Open in IMG/M
3300031566|Ga0307378_10061738Not Available4084Open in IMG/M
3300031566|Ga0307378_10160885Not Available2251Open in IMG/M
3300031578|Ga0307376_10198171Not Available1371Open in IMG/M
3300031658|Ga0307984_1046272Not Available1370Open in IMG/M
3300031669|Ga0307375_10166396All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage1511Open in IMG/M
3300031673|Ga0307377_10226366All Organisms → Viruses → Predicted Viral1443Open in IMG/M
3300032136|Ga0316201_10346850Not Available1282Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).



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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
AqueousEnvironmental → Aquatic → Marine → Coastal → Unclassified → Aqueous59.83%
Freshwater To Marine Saline GradientEnvironmental → Aquatic → Marine → Coastal → Unclassified → Freshwater To Marine Saline Gradient6.84%
SoilEnvironmental → Terrestrial → Soil → Clay → Unclassified → Soil6.84%
Deep SubsurfaceEnvironmental → Aquatic → Marine → Oceanic → Sediment → Deep Subsurface5.98%
Pelagic MarineEnvironmental → Aquatic → Marine → Pelagic → Unclassified → Pelagic Marine5.13%
MarineEnvironmental → Aquatic → Marine → Neritic Zone → Unclassified → Marine3.42%
Marine SedimentEnvironmental → Aquatic → Marine → Oceanic → Sediment → Marine Sediment2.56%
EstuarineEnvironmental → Aquatic → Marine → Intertidal Zone → Estuary → Estuarine2.56%
Saline Water And SedimentEnvironmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Sediment → Saline Water And Sediment2.56%
SeawaterEnvironmental → Aquatic → Marine → Coastal → Unclassified → Seawater1.71%
SeawaterEnvironmental → Aquatic → Marine → Inlet → Unclassified → Seawater0.85%
Worm BurrowEnvironmental → Aquatic → Marine → Coastal → Sediment → Worm Burrow0.85%
MarineEnvironmental → Aquatic → Marine → Unclassified → Unclassified → Marine0.85%

Visualization
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Associated Samples

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Taxon OIDSample NameHabitat TypeIMG/M Link
3300000101Marine microbial communities from Delaware Coast, sample from Delaware MO Early Summer May 2010EnvironmentalOpen in IMG/M
3300000116Marine microbial communities from Delaware Coast, sample from Delaware MO Spring March 2010EnvironmentalOpen in IMG/M
3300005613Saline sediment microbial communities from Etoliko Lagoon, Greece - sedimentEnvironmentalOpen in IMG/M
3300006025Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_22_D_<0.8_DNAEnvironmentalOpen in IMG/M
3300006027Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Fall_30_<0.8_DNAEnvironmentalOpen in IMG/M
3300006802Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_18EnvironmentalOpen in IMG/M
3300006810Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Sep_01EnvironmentalOpen in IMG/M
3300006916Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_24EnvironmentalOpen in IMG/M
3300006919Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_21EnvironmentalOpen in IMG/M
3300007236Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Fall_30_>0.8_DNAEnvironmentalOpen in IMG/M
3300007344Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_4EnvironmentalOpen in IMG/M
3300007345Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Aug_30EnvironmentalOpen in IMG/M
3300007538Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_2 Viral MetaGEnvironmentalOpen in IMG/M
3300007540Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1504_2 Viral MetaGEnvironmentalOpen in IMG/M
3300007542Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1504_1 Viral MetaGEnvironmentalOpen in IMG/M
3300007640Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Aug_28EnvironmentalOpen in IMG/M
3300007960Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_1D Viral MetaGEnvironmentalOpen in IMG/M
3300009079Estuarine microbial communities from the Columbia River estuary - Flood tide ETM metaG S.741EnvironmentalOpen in IMG/M
3300009086Estuarine microbial communities from the Columbia River estuary - Flood tide ETM metaG S.713EnvironmentalOpen in IMG/M
3300009149Deep subsurface microbial communities from Baltic Sea to uncover new lineages of life (NeLLi) - Landsort_02402 metaGEnvironmentalOpen in IMG/M
3300009495Pelagic marine microbial communities from North Sea - COGITO_mtgs_120531EnvironmentalOpen in IMG/M
3300009507Pelagic marine microbial communities from North Sea - COGITO_mtgs_120607EnvironmentalOpen in IMG/M
3300010316Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Spr_15_0.8_DNAEnvironmentalOpen in IMG/M
3300010368Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Spr_15_0.2_DNAEnvironmentalOpen in IMG/M
3300013010Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Spr_31_0.8_DNAEnvironmentalOpen in IMG/M
3300017697Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Spr_31_0.2_DNA (version 2)EnvironmentalOpen in IMG/M
3300021378Coastal seawater microbial communities near Pivers Island, North Carolina, United States - PICO131EnvironmentalOpen in IMG/M
3300021389Coastal seawater microbial communities near Pivers Island, North Carolina, United States - PICO127EnvironmentalOpen in IMG/M
3300022050Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_4 (v3)EnvironmentalOpen in IMG/M
3300022053Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1504_2 Viral MetaG (v2)EnvironmentalOpen in IMG/M
3300022063Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1504_1 Viral MetaG (v2)EnvironmentalOpen in IMG/M
3300022065Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_24 (v2)EnvironmentalOpen in IMG/M
3300022072Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_12 (v3)EnvironmentalOpen in IMG/M
3300022167Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_4 (v2)EnvironmentalOpen in IMG/M
3300022178Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_31 (v3)EnvironmentalOpen in IMG/M
3300022187Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Sep_01 (v3)EnvironmentalOpen in IMG/M
3300022200Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1504_1 Viral MetaG (v3)EnvironmentalOpen in IMG/M
3300023210 (restricted)Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Na_anoxic_4_MGEnvironmentalOpen in IMG/M
3300024262Deep subsurface microbial communities from Baltic Sea to uncover new lineages of life (NeLLi) - Landsort_02402 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300024433Deep subsurface microbial communities from Black Sea to uncover new lineages of life (NeLLi) - Black_00105 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025543Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1504_2 Viral MetaG (SPAdes)EnvironmentalOpen in IMG/M
3300025626Pelagic marine microbial communities from North Sea - COGITO_mtgs_120531 (SPAdes)EnvironmentalOpen in IMG/M
3300025647Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1504_1 Viral MetaG (SPAdes)EnvironmentalOpen in IMG/M
3300025652Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_31 (SPAdes)EnvironmentalOpen in IMG/M
3300025671Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_4 (SPAdes)EnvironmentalOpen in IMG/M
3300025759Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_24 (SPAdes)EnvironmentalOpen in IMG/M
3300025769Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_21 (SPAdes)EnvironmentalOpen in IMG/M
3300025803Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Fall_30_<0.8_DNA (SPAdes)EnvironmentalOpen in IMG/M
3300025849Pelagic marine microbial communities from North Sea - COGITO_mtgs_120607 (SPAdes)EnvironmentalOpen in IMG/M
3300025853Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Sep_01 (SPAdes)EnvironmentalOpen in IMG/M
3300025889Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_18 (SPAdes)EnvironmentalOpen in IMG/M
3300027751Estuarine microbial communities from the Columbia River estuary - Flood tide ETM metaG S.713 (SPAdes)EnvironmentalOpen in IMG/M
3300027917Marine sediment microbial communities from White Oak River estuary, North Carolina - WOR-2-8_12 (SPAdes)EnvironmentalOpen in IMG/M
3300031539Soil microbial communities from Risofladan, Vaasa, Finland - UN-3EnvironmentalOpen in IMG/M
3300031565Soil microbial communities from Risofladan, Vaasa, Finland - UN-2EnvironmentalOpen in IMG/M
3300031566Soil microbial communities from Risofladan, Vaasa, Finland - UN-1EnvironmentalOpen in IMG/M
3300031578Soil microbial communities from Risofladan, Vaasa, Finland - TR-2EnvironmentalOpen in IMG/M
3300031658Marine microbial communities from Ellis Fjord, Antarctic Ocean - #78EnvironmentalOpen in IMG/M
3300031669Soil microbial communities from Risofladan, Vaasa, Finland - TR-1EnvironmentalOpen in IMG/M
3300031673Soil microbial communities from Risofladan, Vaasa, Finland - TR-3EnvironmentalOpen in IMG/M
3300032136Coastal sediment microbial communities from Delaware Bay, Delaware, United States - CS-6 worm burrowEnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID Sample Taxon ID Habitat Sequence
DelMOSum2010_1007343623300000101MarineMISETLALLSKIKKTPKKSSDFMKFAMGEYYLPFSFKDMFRHLKKKV*
DelMOSum2010_1008827823300000101MarineMISETLALLSKMKKTPKKSSDFMKFAMGEYYLPFSFKDMFRHLKKKV*
DelMOSpr2010_1000316323300000116MarineMITETLEILSKIKKPPKKASKELKFAFGNDYLPFSFRDMIRHLKKTL*
DelMOSpr2010_1013682923300000116MarineMITETLEILSKIKKPPKKASKELKFAFGNDYLPFSFRDMITHLKKLV*
Ga0074649_100245293300005613Saline Water And SedimentMIAETIKLLIEVKELPKKASKDLKFAYGNDYLPFSFRDMFRHLKKIL*
Ga0074649_108378733300005613Saline Water And SedimentMITETLELLSKIKKPPKKASKELKFAFGNDYLPFSFRDMINHLKKLV*
Ga0074649_109003813300005613Saline Water And SedimentMIAETIKLLIEVKELPKKASKDLKFAYGNDYLPFSFRDMWRHFKKLR*
Ga0075474_1000087993300006025AqueousMITETLELLSKIKKPPKKASKELKFAFGNEYLPFSFRDMFRHLKKIL*
Ga0075462_1020707523300006027AqueousMITETLELLSKIKKPPKKASKEVKFAFGNDYLPFSFRDMI
Ga0075462_1026379313300006027AqueousKPPKKASKEVKFAFGNDYLPFSFRDMIRHLKKLV*
Ga0070749_1007949723300006802AqueousMITETLELLSKIKKPPKKASKEVKFAFGNDYLPFSFRDMIRHLKKLI*
Ga0070749_1008258623300006802AqueousIIMITETLEILSKIKKPPKKASKELKFAFGNDYLPFSFRDMFRHLKKIL*
Ga0070749_1009936723300006802AqueousMITETLEILSKIKKPPKKASKELKFAFGNDYLPFSFRDMIRHLKKLV*
Ga0070749_1016821013300006802AqueousMIIETLEILSKIKKPPKKASKELKFAFGNDYLPFSFRDMITHLKKLV*
Ga0070749_1021125423300006802AqueousMITETLELLRKIKKPPKKASKELKFAFGNDYLPFSFRDIIRHLKKLL*
Ga0070749_1023857323300006802AqueousMITETLELLSKIKKPPKKASKELKFAFGNDYLPFSFRDMIRHLKKLV*
Ga0070749_1034334123300006802AqueousMITETLEILSKIKKPPKKASKELKFAFGNDYLPFSFRDM
Ga0070749_1068757813300006802AqueousKPPKKASKELKFAFGNDYLPFSFRDMITHLKKLV*
Ga0070754_1007857923300006810AqueousMRIIMITETLELLSKIKKPPKKASKEVKFAFGNDYLPFSFRDMINHLKKLV*
Ga0070754_1019916813300006810AqueousETLELLSKIKKPPKKASKEVKFAFGNDYLPFSFRDMITHLKKLV*
Ga0070754_1034201013300006810AqueousMITETLELLSKIKKPPKKASKEVKFAFGNDYLPFSFRDMITHLKK
Ga0070750_1005336213300006916AqueousIMITETLELLSKIKKPPKKASKELKFAFGNDYLPFSFRDIIRHLKKLL*
Ga0070750_1020395023300006916AqueousMITETLELLSKIKKPPKKASKEVKFAFGNDYLPFSFRDMIRHLKKLV*
Ga0070750_1025224613300006916AqueousMITETLELLSKIKKPPKKASKELKFAFGNDYLPFSFRD
Ga0070750_1047556413300006916AqueousMRIIMITETLEILSKIKKPPKKASKELKFAFGNDYLPFSFRDMF
Ga0070746_1005380923300006919AqueousMITETLELLSKIKKPPKKASKELKFAFGNDYLPFSFRDIIRHLKKLL*
Ga0070746_1041218613300006919AqueousMRIIMITETLEILSKIKKPPKKASKELKFAFGNDYLPFSFRDMFRHLKK
Ga0075463_1000762223300007236AqueousMITETLELLSKIKKPPKKASKEVKFAFGNDYLPFSFRDMITHLKKLV*
Ga0070745_123172323300007344AqueousMITETLEILSKIKKPPKKASKELKFAFGNEYLPFSFRDMFR
Ga0070745_124747623300007344AqueousIEILSKIKKPPKKASKEVKFAFGNDYLPFSFRDMIRHLKKLV*
Ga0070745_134825523300007344AqueousMITETLELLSKIKKPPKKASKEVKFAFGNDYLPFSFRDMFRHLKKIL*
Ga0070752_131700813300007345AqueousMKTETLELLSKIKKPPKKAHKEVNFAFGNDYQPFSFR
Ga0070752_135641513300007345AqueousKIKKPPKKASKEVKFAFGNDYLPFSFRDMIRHLKKLV*
Ga0099851_102385223300007538AqueousMITETLEILSKIKKPPKKASKELKFAFGNYYLPFSFRDMIRHLKKTL*
Ga0099851_102856823300007538AqueousMITETLELLSKIKKPPKKASKELKFAFGNDYLPFSFRDMITHLKKLI*
Ga0099851_107516323300007538AqueousMITETLELLSKIKKPPKKASKELKFAFGNDYLPFSFRDMIRHLKKLI*
Ga0099851_112452013300007538AqueousKIKKPPKKASKELKFAFGNDYLPFSCRDMITHLKKLV*
Ga0099847_108622523300007540AqueousMITETLEILSKIKKPPKKASKEVKFAFGNDYLPFSFRDMITHLKKLV*
Ga0099847_114254813300007540AqueousKPPKKASKELKFAFGNDYLPFSFRDMIRHLKKLI*
Ga0099847_117240423300007540AqueousMITETLELLSKIKKPPKKASKELKFAFGNDYLPFSFRDMFRHLKKTL*
Ga0099847_119709623300007540AqueousMITETLELLSKIKKPPKKASKEVKFAFGNDYLPFSFRDMFRHLK
Ga0099847_120449613300007540AqueousKKTPKKSSDFMKFAMGEYYLPFSFKDMFRHLKKKV*
Ga0099846_105276913300007542AqueousTETLEILSKIKKPPKKASKELKFAFGNDYLPFSFRDMITHLKKLV*
Ga0099846_105964423300007542AqueousRRRRIIMITETLEILSKIKKPPKKASKELKFAFGNDYLPFSFRDMIRHLKKLI*
Ga0099846_128378023300007542AqueousMISETLALLSKIKKTPKKSSDFMKFAMGEYYLPFSFKDMFRHLKKKVQWQRQ*
Ga0070751_102210013300007640AqueousRIIMITETLELLSKIKKPPKKASKEVKFAFGNDYLPFSFRDMIRHLKKLV*
Ga0099850_126625323300007960AqueousMITETLELLSKIKKPPKKASKELKFAFGNEYLPFSFRDMITHLKKLV*
Ga0102814_1004213623300009079EstuarineMITETLEILSKIKKPPKKASKELKFAFGNDYLPFSFRDMFRHLKKIL*
Ga0102812_1060306223300009086EstuarineRIIMITETLEILSKIKKPPKKASKELKFAFGNDYLPFSFRDMFRHLKKIL*
Ga0114918_1008946723300009149Deep SubsurfaceMIAETIKLLIEVKELPKKASKDLKFAYGNDYLPFSFRDMW
Ga0114918_1011284423300009149Deep SubsurfaceMIAETIKLLIEVKELPKKASKDLKFAYGNEYLPFSLRDMFRHLKKIL*
Ga0114918_1023819513300009149Deep SubsurfaceRRIIMIAETIKLLIEVKELPKKASKDLKFAYGNDYLPFSFRDMWRHFKKLR*
Ga0115571_102583423300009495Pelagic MarineMIAETIKLLIEVKKLPKKASKELKFAFGNDYLPFSFRDMITHLKKLV*
Ga0115572_1003000063300009507Pelagic MarineMITETLEILSKIKKPPKKASKELKFAFGKDYLPFSFRDMITHLKKLV*
Ga0115572_1009778823300009507Pelagic MarineMIAETIKLLIEVKKLPKKASKELKFAFGNDYLPFSFRDMIKHLKKLV*
Ga0136655_105140713300010316Freshwater To Marine Saline GradientRRRIIMITETLEILSKIKKPPKKASKELKFAFGNDYLPFSFRDMITHLKKLV*
Ga0136655_125485223300010316Freshwater To Marine Saline GradientMITETLEILSKIKKPPKKASKELKFAFGNDYLPFSFRDMIRHLKKLI*
Ga0129324_1023949823300010368Freshwater To Marine Saline GradientMITETLELLSKIKKPPKKASKELKFAFGNDYLPFSFRDMFRHLKKIL*
Ga0129324_1028405123300010368Freshwater To Marine Saline GradientMITETLEILSKIKKPPKKASKELKFAFGNDYLPFSFRDMIT
Ga0129327_1020726813300013010Freshwater To Marine Saline GradientVRRRRIIMITETLEILSKIKKPPKKASKELKFAFGNDYLPFSFRDMITHLKKLV*
Ga0129327_1020780123300013010Freshwater To Marine Saline GradientMITETLELLSKIKKPPKKASKELKFAFGNDYLPFSFRDMITHLKKLV*
Ga0180120_1011439913300017697Freshwater To Marine Saline GradientEILSKIKKPPKKASKELKFAFGNDYLPFSFRDMITHLKKLV
Ga0180120_1019466423300017697Freshwater To Marine Saline GradientMISETLALLSKIKKTPKKSSDFMKFAMGEYYLPFSFKDMFRHLKKK
Ga0213861_1013593623300021378SeawaterMITETLEILSNIKKPPKKASKEVKFAFGNDYLPFSFRDMITHLKKLV
Ga0213868_1028976113300021389SeawaterMITETLEILSKIKKPPKKASKELKFAFGNEYLPFSFRDMFRHLKKIL
Ga0196883_100011083300022050AqueousMITETLELLSKIKKPPKKASKELKFAFGNEYLPFSFRDMFRHLKKIL
Ga0212030_100029433300022053AqueousMISETLALLSKMKKTPKKSSDFMKFAMGEYYLPFSFKDMFRHLKKKV
Ga0212030_100608223300022053AqueousMITETLELLSKIKKPPKKASKELKFAFGNDYLPFSFRDMFRHLKKIL
Ga0212030_102418123300022053AqueousMITETLEILSKIKKPPKKASKELKFAFGNYYLPFSFRDMIRHLKKTL
Ga0212030_102650823300022053AqueousNMITETLEILSKIKKPPKKASKELKFAFGNDYLPFSFRDMIRHLKKLI
Ga0212029_101726323300022063AqueousRFTRRRIIMITETLEILSKIKKPPKKASKELKFAFGNDYLPFSFRDMITHLKKLV
Ga0212024_100679823300022065AqueousMITETLEILSKIKKPPKKASKELKFAFGNDYLPFSFRDMITHLKKL
Ga0196889_102110113300022072AqueousMISETLALLSKMKKTPKKSSDFMKFAMGEYYLPFSFKDMF
Ga0212020_105156523300022167AqueousMITETLEILSKIKKPPKKASKELKFAFGNDYLPFSFRDMFRHLKKIL
Ga0196887_102381723300022178AqueousMISETLALLSKIKKTPKKSSDFMKFAMGEYYLPFSFKDMFRHLKKKV
Ga0196899_103150513300022187AqueousLELLSKIKKPPKKASKEVKFAFGNDYLPFSFRDMINHLKKLV
Ga0196901_103045123300022200AqueousMITETLELLSKIKKPPKKASKEVKFAFGNDYLPFSFRDMFRHLKKLI
Ga0196901_106782323300022200AqueousRRRRIIMITETLEILSKIKKPPKKASKELKFAFGNDYLPFSFRDMITHLKKLV
(restricted) Ga0233412_1002896023300023210SeawaterMITETLEILSKIKKPPKKASKELKFAFGNDYLPFSFRDMIRHLKKLV
Ga0210003_102986933300024262Deep SubsurfaceMIAETIKLLIEVKELPKKASKDLKFAYGNDYLPFSFRDMWR
Ga0210003_105026413300024262Deep SubsurfaceMIAETIKLLIEVKELPKKASKDLKFAYGNDYLPFSF
Ga0210003_111366413300024262Deep SubsurfaceIEVKELPKKASKDLKFAYGNDYLPFSFRDMWRHFKKLR
Ga0209986_1014884323300024433Deep SubsurfaceMIAETIKLLIEVKELPKKASKDLKFAYGNDYLPFSFRDMWRHLKKLR
Ga0208303_100430733300025543AqueousMITETLEILSKIKKPPKKASKDLKFAFGNEYLPFSFRDMFRHLKKIL
Ga0208303_101295523300025543AqueousMITETLELLSKIKKPPKKASKELKFAFGNDYLPFSFRDMIT
Ga0208303_104084223300025543AqueousMITETLEILSKIKKPPKKASKEVKFAFGNDYLPFSFRDMITHLKKLV
Ga0208303_110472823300025543AqueousMITETLEILSKIKKPPKKASKELKFAFGNDYLPFSFRDMITHLKKFV
Ga0209716_101573733300025626Pelagic MarineMIAETIKLLIEVKKLPKKASKELKFAFGNDYLPFSFRDMITHLKKLV
Ga0208160_101343423300025647AqueousMITETLELLSKIKKPPKKASKELKFAFGNDYLPFSFRDMITHLKKLV
Ga0208160_105277823300025647AqueousKKPPKKASKELKFAFGNDYLPFSFRDMIRHLKKLI
Ga0208160_113883913300025647AqueousKKTPKKSSDFMKFAMGEYYLPFSFKDMFRHLKKKV
Ga0208134_103696523300025652AqueousKNKKTMISETLALLSKMKKTPKKSSDFMKFAMGEYYLPFSFKDMFRHLKKKV
Ga0208898_103895923300025671AqueousMITETLELLSKIKKPPKKASKEVKFAFGNDYLPFSFRDMITHLKKLV
Ga0208899_104863723300025759AqueousMITETLELLSKIKKPPKKASKEVKFAFGNDYLPFSFRDMIRHLKKLV
Ga0208899_117655223300025759AqueousMRIIMITETLEILSKIKKPPKKASKELKFAFGNDYLPFSFRDMFRHLKKLI
Ga0208767_102988623300025769AqueousMITETLELLSKIKKPPKKASKELKFAFGNDYLPFSFRDIIRHLKKLL
Ga0208767_113562813300025769AqueousMITETLEILSKIKKPPKKASKELKFAFGNDYLPFSFRDMFRHLKKTLXKY
Ga0208425_108741213300025803AqueousRCTRRRIIMITETLEILSKIKKPPKKASKELKFAFGNDYLPFSFRDMITHLKKLV
Ga0209603_103476113300025849Pelagic MarineMIAETIKLLIEVKKLPKKASKELKFAFGNDYLPFSFRDMIKHLKKLV
Ga0209603_105671733300025849Pelagic MarineNMIAETIKLLIEVKKLPKKASKELKFAFGNDYLPFSFRDMITHLKKLV
Ga0208645_107741423300025853AqueousRRIIMITETLELLSKIKKPPKKASKEVKFAFGNDYLPFSFRDMITHLKKLV
Ga0208644_107401713300025889AqueousLSKIKKPPKKASKELKFAFGNDYLPFSFRDMFRHLKKLI
Ga0208644_116935613300025889AqueousLELLRKIKKPPKKASKELKFAFGNDYLPFSFRDIIRHLKKLL
Ga0208304_1028779913300027751EstuarineITETLEILSKIKKPPKKASKELKFAFGNDYLPFSFRDMFRHLKKIL
Ga0209536_10081557123300027917Marine SedimentITETLEILSKIKKPPKKASKELKFAFGNDYLPFSFRDMIRHLKKLV
Ga0209536_10167049913300027917Marine SedimentMITETLELLSKVKKPPKKASKEVKFAFGNDFLPFSF
Ga0209536_10335711523300027917Marine SedimentRIIMITETLEILSKIKKPPKKASKELKFAFGNDYLPFSFRDMITHLKKLV
Ga0307380_1030503713300031539SoilMIAETIKLLIEVKELPKKASKDLKFAYGNDYLPFSFRDMWRHFKKLR
Ga0307379_1049878023300031565SoilTIKLLIEVKELPKKASKNLKFAYGNDYLPFSFRDMWRHFKKLR
Ga0307379_1061598423300031565SoilMIAETIKLLIEVKELPKKASKDLKFAYGNDYLPFSFRDMWRH
Ga0307378_1006173823300031566SoilMITETIKLLIEVKELPKKASKDLKFAYGNEYLPFSFRDMWRHFKKLR
Ga0307378_1016088533300031566SoilMIAETIKLLIEVKELPKKASKDLKFAYGNEYLPFSLRDMFRHLKKIL
Ga0307376_1019817113300031578SoilMIAETIKLLIEVKELPKKASKDLKFAYGNDYLPFSFRD
Ga0307984_104627223300031658MarineMISETLALLIKMKKTPKKSSEFMKFAMGEDYLPFSFKDMFRHLKKKL
Ga0307375_1016639623300031669SoilLLIEVKELPKKASKDLKFAYGNDYLPFSLRDMFRHLKKIL
Ga0307377_1022636623300031673SoilMHPKEDNMIAETIKLLIEVKELPKKASKDLKFAYGNDYLPFSFRDMWRQFKKLR
Ga0316201_1034685023300032136Worm BurrowIIMITETLELLSKIKKPPKKASKELKFAFGNDYLPFSFRDMFRHLKKLI


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