Metagenome / Metatranscriptome Family F077004

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F077004
Family Type	Metagenome / Metatranscriptome
Number of Sequences	117
Average Sequence Length	67 residues
Representative Sequence	VIVPNIGGFAGLSLRFPNAKVSFGYRADAFFGAMDGGIDARKTYDRDFYGPFATISIGLGG
Number of Associated Samples	43
Number of Associated Scaffolds	117

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	0.87 %
% of genes near scaffold ends (potentially truncated)	88.03 %
% of genes from short scaffolds (< 2000 bps)	82.91 %
Associated GOLD sequencing projects	39
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.46

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (54.701 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (22.222 % of family members)
Environment Ontology (ENVO)	Unclassified (24.786 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (70.940 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 0.00% β-sheet: 40.45% Coil/Unstructured: 59.55%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.46
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.46
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 117 Family Scaffolds
PF08281	Sigma70_r4_2	10.26
PF04542	Sigma70_r2	10.26
PF07715	Plug	4.27
PF02371	Transposase_20	3.42
PF04357	TamB	2.56
PF04773	FecR	1.71
PF03472	Autoind_bind	1.71
PF13672	PP2C_2	0.85
PF06210	DUF1003	0.85
PF09529	Intg_mem_TP0381	0.85
PF00892	EamA	0.85
PF05015	HigB-like_toxin	0.85
PF03060	NMO	0.85
PF13586	DDE_Tnp_1_2	0.85
PF00270	DEAD	0.85
PF01609	DDE_Tnp_1	0.85
PF16220	DUF4880	0.85
PF08448	PAS_4	0.85
PF01381	HTH_3	0.85
PF13358	DDE_3	0.85
PF07298	NnrU	0.85
PF05284	DUF736	0.85
PF00218	IGPS	0.85
PF02353	CMAS	0.85
PF02781	G6PD_C	0.85
PF01865	PhoU_div	0.85
PF04185	Phosphoesterase	0.85
PF14310	Fn3-like	0.85
PF13419	HAD_2	0.85
PF13411	MerR_1	0.85

COG ID	Name	Functional Category	% Frequency in 117 Family Scaffolds
COG0568	DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32)	Transcription [K]	10.26
COG1191	DNA-directed RNA polymerase specialized sigma subunit	Transcription [K]	10.26
COG1595	DNA-directed RNA polymerase specialized sigma subunit, sigma24 family	Transcription [K]	10.26
COG4941	Predicted RNA polymerase sigma factor, contains C-terminal TPR domain	Transcription [K]	10.26
COG2197	DNA-binding response regulator, NarL/FixJ family, contains REC and HTH domains	Transcription [K]	3.42
COG3547	Transposase	Mobilome: prophages, transposons [X]	3.42
COG2911	Phospholipid transport to the outer membrane protein TamB	Cell wall/membrane/envelope biogenesis [M]	2.56
COG0134	Indole-3-glycerol phosphate synthase	Amino acid transport and metabolism [E]	0.85
COG0364	Glucose-6-phosphate 1-dehydrogenase	Carbohydrate transport and metabolism [G]	0.85
COG0516	IMP dehydrogenase/GMP reductase	Nucleotide transport and metabolism [F]	0.85
COG1392	Phosphate transport regulator YkaA, distantly related to PhoU, UPF0111/DUF47 family	Inorganic ion transport and metabolism [P]	0.85
COG2070	NAD(P)H-dependent flavin oxidoreductase YrpB, nitropropane dioxygenase family	General function prediction only [R]	0.85
COG2226	Ubiquinone/menaquinone biosynthesis C-methylase UbiE/MenG	Coenzyme transport and metabolism [H]	0.85
COG2227	2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase	Coenzyme transport and metabolism [H]	0.85
COG2230	Cyclopropane fatty-acyl-phospholipid synthase and related methyltransferases	Lipid transport and metabolism [I]	0.85
COG3039	Transposase and inactivated derivatives, IS5 family	Mobilome: prophages, transposons [X]	0.85
COG3293	Transposase	Mobilome: prophages, transposons [X]	0.85
COG3385	IS4 transposase InsG	Mobilome: prophages, transposons [X]	0.85
COG3511	Phospholipase C	Cell wall/membrane/envelope biogenesis [M]	0.85
COG3549	Plasmid maintenance system killer protein	Defense mechanisms [V]	0.85
COG4094	Uncharacterized membrane protein	Function unknown [S]	0.85
COG4420	Uncharacterized membrane protein	Function unknown [S]	0.85
COG5421	Transposase	Mobilome: prophages, transposons [X]	0.85
COG5433	Predicted transposase YbfD/YdcC associated with H repeats	Mobilome: prophages, transposons [X]	0.85
COG5489	Uncharacterized conserved protein, DUF736 family	Function unknown [S]	0.85
COG5659	SRSO17 transposase	Mobilome: prophages, transposons [X]	0.85

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	54.70 %
Unclassified	root	N/A	45.30 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	54.70 %
Unclassified	root	N/A	45.30 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	54.70 %
Unclassified	root	N/A	45.30 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	47.01 %
Unclassified	root	N/A	45.30 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	1.71 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	45.30 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	27.35 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	1.71 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	45.30 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	7.69 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	2.56 %
Micropepsales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Micropepsales	1.71 %
Planctomycetia	class	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia	1.71 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	0.85 %
Rickettsiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rickettsiales	0.85 %
Sphingomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales	0.85 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	45.30 %
Micropepsaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Micropepsales → Micropepsaceae	1.71 %
Azospirillaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Azospirillaceae	1.71 %
Pirellulales	order	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Pirellulales	1.71 %
unclassified Rickettsiales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rickettsiales → unclassified Rickettsiales	0.85 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.85 %
Beijerinckiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae	0.85 %
Hyphomicrobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae	0.85 %
Sphingomonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae	0.85 %
Rhodospirillaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae	0.85 %
Methylocystaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylocystaceae	0.85 %
Phyllobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae	0.85 %
Propionibacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	45.30 %
Rhizomicrobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Micropepsales → Micropepsaceae → Rhizomicrobium	1.71 %
Nitrospirillum	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Azospirillaceae → Nitrospirillum	1.71 %
Pirellulaceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Pirellulales → Pirellulaceae	1.71 %
Rickettsiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rickettsiales → unclassified Rickettsiales → Rickettsiales bacterium	0.85 %
Nocardioidaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae	0.85 %
Telmatospirillum	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → Telmatospirillum	0.85 %
Aquabacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Aquabacter	0.85 %
Mesorhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium	0.85 %
Methylocapsa	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → Methylocapsa	0.85 %
Sphingopyxis	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingopyxis	0.85 %
Methylosinus	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylocystaceae → Methylosinus	0.85 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	45.30 %
Rhodopirellula	genus	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Pirellulales → Pirellulaceae → Rhodopirellula	1.71 %
Nitrospirillum amazonense	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Azospirillaceae → Nitrospirillum → Nitrospirillum amazonense	1.71 %
unclassified Rhizomicrobium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Micropepsales → Micropepsaceae → Rhizomicrobium → unclassified Rhizomicrobium	0.85 %
unclassified Methylocapsa	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → Methylocapsa → unclassified Methylocapsa	0.85 %
unclassified Methylosinus	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylocystaceae → Methylosinus → unclassified Methylosinus	0.85 %
Aquabacter spiritensis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Aquabacter → Aquabacter spiritensis	0.85 %
Nocardioides	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides	0.85 %
Sphingopyxis granuli	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingopyxis → Sphingopyxis granuli	0.85 %
Rhizomicrobium palustre	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Micropepsales → Micropepsaceae → Rhizomicrobium → Rhizomicrobium palustre	0.85 %
Mesorhizobium amorphae	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium → Mesorhizobium amorphae	0.85 %
Rickettsiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rickettsiales → unclassified Rickettsiales → Rickettsiales bacterium	0.85 %
Telmatospirillum	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → Telmatospirillum	0.85 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	45.30 %
Rhodopirellula solitaria	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Pirellulales → Pirellulaceae → Rhodopirellula → Rhodopirellula solitaria	1.71 %
Nitrospirillum amazonense CBAmc	strain	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Azospirillaceae → Nitrospirillum → Nitrospirillum amazonense → Nitrospirillum amazonense CBAmc	1.71 %
Methylocapsa sp. S129	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → Methylocapsa → unclassified Methylocapsa → Methylocapsa sp. S129	0.85 %
Mesorhizobium amorphae CCBAU 01583	strain	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium → Mesorhizobium amorphae → Mesorhizobium amorphae CCBAU 01583	0.85 %
Nocardioides panacis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides → Nocardioides panacis	0.85 %
Methylosinus sp. KRF6	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylocystaceae → Methylosinus → unclassified Methylosinus → Methylosinus sp. KRF6	0.85 %
Rhizomicrobium sp. SCGC AG-212-E05	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Micropepsales → Micropepsaceae → Rhizomicrobium → unclassified Rhizomicrobium → Rhizomicrobium sp. SCGC AG-212-E05	0.85 %
Aquabacter spiritensis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Aquabacter → Aquabacter spiritensis	0.85 %
Sphingopyxis granuli	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingopyxis → Sphingopyxis granuli	0.85 %
Rhizomicrobium palustre	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Micropepsales → Micropepsaceae → Rhizomicrobium → Rhizomicrobium palustre	0.85 %
Rickettsiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rickettsiales → unclassified Rickettsiales → Rickettsiales bacterium	0.85 %
Telmatospirillum	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → Telmatospirillum	0.85 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.85 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2040502000\|ACOD_F64RS5002H1B9I	Not Available	522	Open in IMG/M
2040502000\|ACOD_GAKN62C01D51NJ	Not Available	530	Open in IMG/M
3300005163\|Ga0066823_10065850	Not Available	685	Open in IMG/M
3300005341\|Ga0070691_11075125	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	506	Open in IMG/M
3300005602\|Ga0070762_10161872	All Organisms → cellular organisms → Bacteria → Proteobacteria	1346	Open in IMG/M
3300005614\|Ga0068856_102151791	Not Available	567	Open in IMG/M
3300006806\|Ga0079220_11422361	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Azospirillaceae → Nitrospirillum → Nitrospirillum amazonense → Nitrospirillum amazonense CBAmc	590	Open in IMG/M
3300006806\|Ga0079220_11822397	Not Available	537	Open in IMG/M
3300009093\|Ga0105240_10384184	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Pirellulales → Pirellulaceae → Rhodopirellula → Rhodopirellula solitaria	1585	Open in IMG/M
3300009093\|Ga0105240_10396498	Not Available	1555	Open in IMG/M
3300009093\|Ga0105240_10485946	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1376	Open in IMG/M
3300009093\|Ga0105240_10499247	Not Available	1353	Open in IMG/M
3300010371\|Ga0134125_10485412	Not Available	1369	Open in IMG/M
3300010371\|Ga0134125_10636425	Not Available	1178	Open in IMG/M
3300010371\|Ga0134125_10666063	All Organisms → cellular organisms → Bacteria → Proteobacteria	1149	Open in IMG/M
3300010371\|Ga0134125_11256158	All Organisms → cellular organisms → Bacteria → Proteobacteria	809	Open in IMG/M
3300010371\|Ga0134125_11387403	Not Available	766	Open in IMG/M
3300010371\|Ga0134125_12453941	Not Available	567	Open in IMG/M
3300010371\|Ga0134125_13145785	Not Available	500	Open in IMG/M
3300010373\|Ga0134128_10172400	All Organisms → cellular organisms → Bacteria → Proteobacteria	2442	Open in IMG/M
3300010373\|Ga0134128_10219711	Not Available	2136	Open in IMG/M
3300010373\|Ga0134128_10270626	All Organisms → cellular organisms → Bacteria → Proteobacteria	1905	Open in IMG/M
3300010373\|Ga0134128_10351514	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rickettsiales → unclassified Rickettsiales → Rickettsiales bacterium	1647	Open in IMG/M
3300010373\|Ga0134128_10755890	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1078	Open in IMG/M
3300010373\|Ga0134128_10814794	Not Available	1035	Open in IMG/M
3300010373\|Ga0134128_11050818	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	900	Open in IMG/M
3300010373\|Ga0134128_11766861	All Organisms → cellular organisms → Bacteria	680	Open in IMG/M
3300010379\|Ga0136449_100616895	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1844	Open in IMG/M
3300010379\|Ga0136449_101895185	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium → Mesorhizobium amorphae → Mesorhizobium amorphae CCBAU 01583	886	Open in IMG/M
3300010396\|Ga0134126_10000744	All Organisms → cellular organisms → Bacteria → Proteobacteria	40907	Open in IMG/M
3300010396\|Ga0134126_10037257	All Organisms → cellular organisms → Bacteria → Proteobacteria	6141	Open in IMG/M
3300010396\|Ga0134126_10206731	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2345	Open in IMG/M
3300010396\|Ga0134126_10989641	Not Available	942	Open in IMG/M
3300010396\|Ga0134126_11044733	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	913	Open in IMG/M
3300010396\|Ga0134126_11482268	All Organisms → cellular organisms → Bacteria → Proteobacteria	748	Open in IMG/M
3300010396\|Ga0134126_11483407	Not Available	748	Open in IMG/M
3300010396\|Ga0134126_11548820	All Organisms → cellular organisms → Bacteria → Proteobacteria	730	Open in IMG/M
3300010396\|Ga0134126_12416854	Not Available	572	Open in IMG/M
3300012943\|Ga0164241_10002668	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	18910	Open in IMG/M
3300012943\|Ga0164241_10192490	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylocystaceae → Methylosinus → unclassified Methylosinus → Methylosinus sp. KRF6	1459	Open in IMG/M
3300012943\|Ga0164241_10222221	All Organisms → cellular organisms → Bacteria	1351	Open in IMG/M
3300012943\|Ga0164241_10458220	Not Available	916	Open in IMG/M
3300012943\|Ga0164241_10724932	Not Available	722	Open in IMG/M
3300012943\|Ga0164241_10816856	Not Available	680	Open in IMG/M
3300012943\|Ga0164241_11247990	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	550	Open in IMG/M
3300013104\|Ga0157370_10664640	Not Available	952	Open in IMG/M
3300013104\|Ga0157370_11050718	Not Available	736	Open in IMG/M
3300014498\|Ga0182019_11050916	Not Available	593	Open in IMG/M
3300015053\|Ga0137405_1143593	Not Available	654	Open in IMG/M
3300017943\|Ga0187819_10422206	Not Available	765	Open in IMG/M
3300017943\|Ga0187819_10638815	Not Available	602	Open in IMG/M
3300017955\|Ga0187817_11135335	Not Available	502	Open in IMG/M
3300020582\|Ga0210395_11344319	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides → Nocardioides panacis	522	Open in IMG/M
3300021180\|Ga0210396_10008141	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingopyxis → Sphingopyxis granuli	9959	Open in IMG/M
3300021180\|Ga0210396_10729190	All Organisms → cellular organisms → Bacteria	854	Open in IMG/M
3300021180\|Ga0210396_11080385	Not Available	676	Open in IMG/M
3300021180\|Ga0210396_11472887	Not Available	560	Open in IMG/M
3300021401\|Ga0210393_11277978	All Organisms → cellular organisms → Bacteria → Proteobacteria	589	Open in IMG/M
3300021404\|Ga0210389_10362726	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Micropepsales → Micropepsaceae → Rhizomicrobium → Rhizomicrobium palustre	1138	Open in IMG/M
3300021405\|Ga0210387_10029899	All Organisms → cellular organisms → Bacteria → Proteobacteria	4287	Open in IMG/M
3300021405\|Ga0210387_10194194	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1758	Open in IMG/M
3300021405\|Ga0210387_10377935	All Organisms → cellular organisms → Bacteria	1254	Open in IMG/M
3300021405\|Ga0210387_10796730	All Organisms → cellular organisms → Bacteria → Proteobacteria	835	Open in IMG/M
3300021405\|Ga0210387_11871175	Not Available	504	Open in IMG/M
3300021474\|Ga0210390_10023164	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	5055	Open in IMG/M
3300021474\|Ga0210390_10121012	All Organisms → cellular organisms → Bacteria → Proteobacteria	2193	Open in IMG/M
3300021474\|Ga0210390_10270045	All Organisms → cellular organisms → Bacteria → Proteobacteria	1441	Open in IMG/M
3300021474\|Ga0210390_11267327	Not Available	592	Open in IMG/M
3300021475\|Ga0210392_10372848	All Organisms → cellular organisms → Bacteria	1036	Open in IMG/M
3300021475\|Ga0210392_10467618	Not Available	926	Open in IMG/M
3300021475\|Ga0210392_10967110	All Organisms → cellular organisms → Bacteria → Proteobacteria	637	Open in IMG/M
3300021477\|Ga0210398_10683099	Not Available	831	Open in IMG/M
3300021477\|Ga0210398_10798879	Not Available	760	Open in IMG/M
3300021477\|Ga0210398_10867538	Not Available	724	Open in IMG/M
3300021477\|Ga0210398_11576418	Not Available	509	Open in IMG/M
3300022721\|Ga0242666_1103374	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	661	Open in IMG/M
3300025464\|Ga0208076_1051663	Not Available	716	Open in IMG/M
3300025627\|Ga0208220_1002261	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	7815	Open in IMG/M
3300025627\|Ga0208220_1004642	All Organisms → cellular organisms → Bacteria → Proteobacteria	5121	Open in IMG/M
3300025627\|Ga0208220_1009582	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3325	Open in IMG/M
3300025627\|Ga0208220_1020412	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2127	Open in IMG/M
3300025627\|Ga0208220_1066929	All Organisms → cellular organisms → Bacteria	1017	Open in IMG/M
3300025627\|Ga0208220_1091869	All Organisms → cellular organisms → Bacteria → Proteobacteria	826	Open in IMG/M
3300025627\|Ga0208220_1137493	Not Available	631	Open in IMG/M
3300025627\|Ga0208220_1149488	Not Available	596	Open in IMG/M
3300025633\|Ga0208480_1003669	All Organisms → cellular organisms → Bacteria → Proteobacteria	5277	Open in IMG/M
3300025634\|Ga0208589_1071790	Not Available	842	Open in IMG/M
3300025634\|Ga0208589_1084562	Not Available	759	Open in IMG/M
3300025703\|Ga0208357_1110377	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	807	Open in IMG/M
3300025913\|Ga0207695_10257730	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Pirellulales → Pirellulaceae → Rhodopirellula → Rhodopirellula solitaria	1642	Open in IMG/M
3300025913\|Ga0207695_10573982	Not Available	1009	Open in IMG/M
3300026078\|Ga0207702_11546011	Not Available	657	Open in IMG/M
3300026078\|Ga0207702_12166836	Not Available	545	Open in IMG/M
3300027854\|Ga0209517_10455576	Not Available	706	Open in IMG/M
3300027884\|Ga0209275_10113147	All Organisms → cellular organisms → Bacteria → Proteobacteria	1403	Open in IMG/M
3300027884\|Ga0209275_10200517	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Azospirillaceae → Nitrospirillum → Nitrospirillum amazonense → Nitrospirillum amazonense CBAmc	1079	Open in IMG/M
3300027905\|Ga0209415_10741989	Not Available	695	Open in IMG/M
3300031241\|Ga0265325_10296784	Not Available	722	Open in IMG/M
3300031247\|Ga0265340_10289062	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → Methylocapsa → unclassified Methylocapsa → Methylocapsa sp. S129	728	Open in IMG/M
3300031247\|Ga0265340_10542619	All Organisms → cellular organisms → Bacteria → Proteobacteria	512	Open in IMG/M
3300031249\|Ga0265339_10392503	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	649	Open in IMG/M
3300031250\|Ga0265331_10001192	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	19667	Open in IMG/M
3300031711\|Ga0265314_10017486	All Organisms → cellular organisms → Bacteria → Proteobacteria	5628	Open in IMG/M
3300031711\|Ga0265314_10025614	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	4445	Open in IMG/M
3300031711\|Ga0265314_10267698	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → Telmatospirillum	972	Open in IMG/M
3300031711\|Ga0265314_10316561	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	870	Open in IMG/M
3300031711\|Ga0265314_10377091	Not Available	773	Open in IMG/M
3300031711\|Ga0265314_10441493	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	695	Open in IMG/M
3300031711\|Ga0265314_10521641	All Organisms → cellular organisms → Bacteria → Proteobacteria	622	Open in IMG/M
3300031711\|Ga0265314_10579488	Not Available	580	Open in IMG/M
3300031711\|Ga0265314_10614375	Not Available	558	Open in IMG/M
3300031718\|Ga0307474_10533020	All Organisms → cellular organisms → Bacteria → Proteobacteria	922	Open in IMG/M
3300031718\|Ga0307474_10562828	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Micropepsales → Micropepsaceae → Rhizomicrobium → unclassified Rhizomicrobium → Rhizomicrobium sp. SCGC AG-212-E05	897	Open in IMG/M
3300032160\|Ga0311301_10711565	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Aquabacter → Aquabacter spiritensis	1408	Open in IMG/M
3300032160\|Ga0311301_12676037	Not Available	550	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	76.92%
Host-Associated	Host-Associated	23.08%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	74.36%
Plants	Host-Associated → Plants	21.37%
Aquatic	Environmental → Aquatic	2.56%
Arthropoda	Host-Associated → Arthropoda	1.71%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	74.36%
Rhizosphere	Host-Associated → Plants → Rhizosphere	18.80%
Freshwater	Environmental → Aquatic → Freshwater	2.56%
Rhizoplane	Host-Associated → Plants → Rhizoplane	2.56%
Symbiotic Fungal Gardens And Galleries	Host-Associated → Arthropoda → Symbiotic Fungal Gardens And Galleries	1.71%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	70.09%
Soil	Host-Associated → Plants → Rhizosphere → Soil	11.97%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	6.84%
Loam	Environmental → Terrestrial → Soil → Loam	3.42%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	2.56%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	2.56%
Fungus Garden	Host-Associated → Arthropoda → Symbiotic Fungal Gardens And Galleries → Fungus Garden	1.71%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	0.85%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	33.33%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	23.93%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	11.97%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	11.11%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	6.84%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	2.56%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	2.56%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	2.56%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.71%
Unclassified	Host-Associated → Arthropoda → Symbiotic Fungal Gardens And Galleries → Fungus Garden → Unclassified	1.71%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	0.85%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	0.85%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	22.22%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	20.51%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere	11.97%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	11.11%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	5.98%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	5.13%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	5.13%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	2.56%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	2.56%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	2.56%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	1.71%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.71%
Fungus Garden	Host-Associated → Arthropoda → Symbiotic Fungal Gardens And Galleries → Fungus Garden → Unclassified → Fungus Garden	1.71%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.71%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.85%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	0.85%
Fen	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Fen	0.85%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	0.85%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2040502000	Fungus garden microbial communities from Atta colombica in Panama - dump bottom	Host-Associated	Open in IMG/M
3300005163	Soil and rhizosphere microbial communities from Laval, Canada - mgHMB	Environmental	Open in IMG/M
3300005341	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG	Environmental	Open in IMG/M
3300005602	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2	Environmental	Open in IMG/M
3300005614	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2	Host-Associated	Open in IMG/M
3300006806	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100	Environmental	Open in IMG/M
3300009093	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG	Host-Associated	Open in IMG/M
3300010371	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300010396	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2	Environmental	Open in IMG/M
3300012943	Backyard soil microbial communities from Emeryville, California, USA - Original compost - Back yard soil (BY)	Environmental	Open in IMG/M
3300013104	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG	Host-Associated	Open in IMG/M
3300014498	Permafrost microbial communities from Stordalen Mire, Sweden - 812E2M metaG	Environmental	Open in IMG/M
3300015053	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300017943	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_4	Environmental	Open in IMG/M
3300017955	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_2	Environmental	Open in IMG/M
3300020582	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-O	Environmental	Open in IMG/M
3300021180	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O	Environmental	Open in IMG/M
3300021401	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-O	Environmental	Open in IMG/M
3300021404	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-O	Environmental	Open in IMG/M
3300021405	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-O	Environmental	Open in IMG/M
3300021474	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-O	Environmental	Open in IMG/M
3300021475	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-O	Environmental	Open in IMG/M
3300021477	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-O	Environmental	Open in IMG/M
3300022721	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-4-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300025464	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 210-3 shallow-072012 (SPAdes)	Environmental	Open in IMG/M
3300025627	Arctic peat soil from Barrow, Alaska - NGEE Surface sample F53-1 deep-092012 (SPAdes)	Environmental	Open in IMG/M
3300025633	Arctic peat soil from Barrow, Alaska - NGEE Surface sample F53-1 shallow-092012 (SPAdes)	Environmental	Open in IMG/M
3300025634	Arctic peat soil from Barrow, Alaska - NGEE Surface sample F53-2 shallow-092012 (SPAdes)	Environmental	Open in IMG/M
3300025703	Arctic peat soil from Barrow, Alaska - NGEE Surface sample F52-2 deep-092012 (SPAdes)	Environmental	Open in IMG/M
3300025913	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026078	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300027854	Peat soil microbial communities from Weissenstadt, Germany - SII-2010 (SPAdes)	Environmental	Open in IMG/M
3300027884	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2 (SPAdes)	Environmental	Open in IMG/M
3300027905	Peat soil microbial communities from Weissenstadt, Germany - SII-SIP-2007 (SPAdes)	Environmental	Open in IMG/M
3300031241	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG	Host-Associated	Open in IMG/M
3300031247	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG	Host-Associated	Open in IMG/M
3300031249	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG	Host-Associated	Open in IMG/M
3300031250	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG	Host-Associated	Open in IMG/M
3300031711	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG	Host-Associated	Open in IMG/M
3300031718	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05	Environmental	Open in IMG/M
3300032160	Sb_50d combined assembly (MetaSPAdes)	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
ACODB_18668830	2040502000	Fungus Garden	VHYLTTVYKHATPHARSHSVVVPNIGGFAGFSMNYGSAKVSFGYRADFFFGAMDGGIDTRKTYDRNFHGPYATISLGLGG
ACODB_6010860	2040502000	Fungus Garden	RPRFLDTSPAIVNRDRSVVVPNIGGFAGFSFRYPNAKVSFGYRADYFFGAMDVGIVARDSSTRGFHGPFATISIGLGG
Ga0066823_100658502	3300005163	Soil	AFAGITYQIQNLKIKAGYRADFFFGAMDGGIDTRKTEDEKFYGPFATISIGLGG*
Ga0070691_110751251	3300005341	Corn, Switchgrass And Miscanthus Rhizosphere	HHSYNRPRSRSVIVPNIGGFAGLSFNYANAKIKFGYRADFFFGAMDGGIDVRKTYDRNFYGPFATISIGLGG*
Ga0070762_101618721	3300005602	Soil	AKAYTHPHHVTRSRSVVVPNLGGFAGVSVKYPNVKVSLGYRADFFFGAMDTGIDTAKRTTTGFFGPFATVSIGIGG*
Ga0068856_1021517912	3300005614	Corn Rhizosphere	VTIPNLGGFAGLSYRFTNARLSAGYRADFFFGAMDRGLDTRKSTTTGFHGPFATVSIGL*
Ga0079220_114223611	3300006806	Agricultural Soil	NIGAFAGLTYQIQNFKISAGYRADFFFGAMDGGIDARKTEDEKFYGPFATISLGL*
Ga0079220_118223971	3300006806	Agricultural Soil	HNLGRTHSVIVPNVGGFAGVSFRYAAAKMTFGYRGDFFFGAIDSGIDARKKADVGFYGPFASISIGF*
Ga0105240_103841843	3300009093	Corn Rhizosphere	GNLLINRESRRVAVPNLGGFAALSYRFTNAKISAGYLADFFFGAMDGGLDTHRSVTTAFHGPFAKISVGLGG*
Ga0105240_103964983	3300009093	Corn Rhizosphere	VNVSRSHSVTVPNVGGFAGLSFRYTNAKVSLGYRADFFFGAMDNGIDRKTLEDRGFYGPYASIGIGL*
Ga0105240_104859463	3300009093	Corn Rhizosphere	SVRYDNAKVSFGYRADYFMGAIDGGLDTRDSKNRSFHGPFAAISLGFGG*
Ga0105240_104992472	3300009093	Corn Rhizosphere	VVPNLGGFAGLSFKYPNAKVSVGYRADFFFGAMDGGIDAHKSYDRDFYGPFATVSIGLGG
Ga0134125_104854121	3300010371	Terrestrial Soil	YTPVNRTRSRMVTIPNVGGFAGLSYRFTNAKISAGYRADFFFGAKDSGLETRSTADVGFHGPYATISIGLGG*
Ga0134125_106364251	3300010371	Terrestrial Soil	LVYRNSNASVRSKTVTVPNIGGFAGVSWRYPNAKVSFGYRADIFFGAMDSGLDTRRTTDVGFHEPFASLSI
Ga0134125_106660631	3300010371	Terrestrial Soil	TVRYFPSVDALPTVQTNPPVNRTRSRMVTVPNIGGFAALSYRFPNAKLSAGYRADFFFGAKDSGLETRTTADVGFHGPFATVSIGIGG*
Ga0134125_112561581	3300010371	Terrestrial Soil	TPQSSVSCPSSTVPNIGGFAGLSYRFPNAKLSVGYRADFFFGARDGGFETRSTTDVGFHGPFATISVGLGG*
Ga0134125_113874031	3300010371	Terrestrial Soil	RSKSVIVPNVGGFAGLSFRYDAAKVSFGYRADFFFGAMDGGIDTRKTYDRNFYGPFAAISVGLGD*
Ga0134125_124539411	3300010371	Terrestrial Soil	SRSVVVPNLGGFAGFSARYSNAKLSFGYRGDFFFGAMDGGLDARDASNRSFHGPFATISFGLGG*
Ga0134125_131457851	3300010371	Terrestrial Soil	YSPVIRTRSRMVTVPNIGGFAGLSYRFPNAKLSAGYRADFFFGARDGGLEARRTTDVGFHGPYATISVGLGG*
Ga0134128_101724004	3300010373	Terrestrial Soil	IGGFAALSFRFPNAKLSAGYRADFFFGARDGGLETRSATDVGFHGPFATISVGLGG*
Ga0134128_102197113	3300010373	Terrestrial Soil	VPNIGGFAAISLKFPNAKVSLGYRGDFFFGAKDSGFETRSTTDVGFHGPYATISIGLP*
Ga0134128_102706261	3300010373	Terrestrial Soil	VGGLAGLSFRHGDAKVTFGYRADFFFGAMDGGVDARKSYDRDFYGPYATISIGLGG*
Ga0134128_103515142	3300010373	Terrestrial Soil	DRSRSVVVPNVGVLAGFSFRYPNAKVSFGYRADMFFGAMDMGIDQRDVKDRTFHGPFASVSIGLGG*
Ga0134128_107558901	3300010373	Terrestrial Soil	VPNVGGFAAMSYRFPNAKLSAGYRADFFFGAMDGGIDTRKSEDQKFYGPFATISLGLGG*
Ga0134128_108147941	3300010373	Terrestrial Soil	SKVPAYTPINANHSRSHSVVVPNIGGFAGLSFRYAEAKVSFGYRADFFFGAVDGGIDMRKTYDRDFYGPFATISVGLGG*
Ga0134128_110508181	3300010373	Terrestrial Soil	STYNTGRKPFARSRSVVVPNVGGFAGFSAQYSNAKLSFGYRADFFFGAMDGGLDTRKTYDRIFHGPFAKVSIGLGG*
Ga0134128_117668612	3300010373	Terrestrial Soil	SHTVTVPNIGAFAGLTYQIQNFKIRAGYRADFFFGAMDGGIDTRKSYDRDFYGPYATISIGLGG*
Ga0136449_1006168951	3300010379	Peatlands Soil	STSPSRSREVIVPNVGGFAGVSWRYPNAKVSLGYRADFFFGAMDGGIDAAHRENVGFYGPFATISVGLP*
Ga0136449_1018951851	3300010379	Peatlands Soil	QHTNAAGHNRMRSVVVPNLGGFAGLSYRFTNAKLSVGYRADFFFGAMDGGIDAARKENQGFFGPFATISVGLGG*
Ga0134126_1000074427	3300010396	Terrestrial Soil	LVYRSSNASVRSKMVTVPNIGGFDGISWRYPNAKVSFGYRADIFFGAMDSGLDTRRTTDVGFHEPFASLSIGLGH*
Ga0134126_100372571	3300010396	Terrestrial Soil	IPNIGGFAALSYRFPNAKLSAGYRADFFFGARDSGFETRSTADVGFHGPFATISIGLGR*
Ga0134126_102067314	3300010396	Terrestrial Soil	SVIVPNIGAFAALSLSFPNAKISLGYRADFFFGAVDGGIGVRKTYDRDFYGPFATISVGLGG*
Ga0134126_109896412	3300010396	Terrestrial Soil	SVVVPNIGGFAGVSFRYPNAKVSFGYRADFFLGAMDTGIDVRHTVDRNFYGPFATISIGLGG*
Ga0134126_110447331	3300010396	Terrestrial Soil	TYQPPPFDKTRSRSVTVPNVGGSLGLSFRYPNAKISIGYRADFFFGAEDGGVDTRKSENRGFYGPFASISIGIGD*
Ga0134126_114822681	3300010396	Terrestrial Soil	QYPTHHTRSRAVTVPNIGGFAGFSFRYDNAKIALGYRADFFFGAMDGGIDARQTYDRNFYGPFATVSIGLGG*
Ga0134126_114834071	3300010396	Terrestrial Soil	PQGRSRSAIVPNVGGFAGLSFKYDTAKLTLGYRADFFFGAMDGGIDAHKTYDRNFYGPYATISIGLGG*
Ga0134126_115488202	3300010396	Terrestrial Soil	SRSVTVPNIGAFAGLTYRIDNAKISAGYRADFFFGAMDGGLDTGRTEDQKFYGPFATVSIGLGG*
Ga0134126_124168541	3300010396	Terrestrial Soil	APTPYVSLYNHVVDRTRSRGVAVPNLGGFAGFSVIKGSAKVSFGYRADWYFGAMDTGIDVRQTKDVGFQGPFATISVGLGG*
Ga0164241_1000266811	3300012943	Soil	VVNPPVTSTRSRTVAVPNPGGFAGLSYRFTNAKLSAGYRADFFFGAMDCGLDIRQSTTTGFHGPFATTGIGLGG*
Ga0164241_101924901	3300012943	Soil	FAGVSAKFPNAKVSLGYRADYFFGAMDGGLDARKSYDRAFRGPFAMISIGLGG*
Ga0164241_102222211	3300012943	Soil	VPNAGGTAGISVRYPNAKLTLGYRADFFFGAMDGGVDARKSETRGFYGPFATVSMGFGG*
Ga0164241_104582201	3300012943	Soil	PVTVYRHTPPGQFRSRSVVVPNIGASAGFSVNYANAKVSFGYRADFFFGAMDGGIDTRKTYDRNFYGPFATVSIGLGG*
Ga0164241_107249322	3300012943	Soil	FAGISYRFPNAKVSAGYRADFFLNAMDGGLDAPRSKTVSFHGPFATVSIGLGG*
Ga0164241_108168561	3300012943	Soil	VGGSVGLSVHYPNAKFSLGYRADMFFGAMDGGIDARKTYDRAFFGPYASVSIGLGG*
Ga0164241_112479903	3300012943	Soil	VPNIGGFAGLSYRFPNAKLSLGYRADFFFGAMDGGRDLRKTYDRNFYGPFATISVGLGG*
Ga0157370_106646401	3300013104	Corn Rhizosphere	VIVPNIGGFAGLSLRFPNAKVSFGYRADAFFGAMDGGIDARKTYDRDFYGPFATISIGLGG*
Ga0157370_110507181	3300013104	Corn Rhizosphere	SATGTPAPGVSTVYNHPPRIHDRSRSVVVPNVGVLAGFSFRYPNAKVSFGYRADMFFGAMDMGIDQRDVKDRTFHGPFASVSIGLGG*
Ga0182019_110509161	3300014498	Fen	TRAHTVTVPNVGGFAGATWRIANVKASFGYRADLFFGAMDGGIDAAKKENVGFYGPFATISVGIGG*
Ga0137405_11435931	3300015053	Vadose Zone Soil	RFCGRLGASVRYRNAKVSFGYRADMFFGAMDGGIDARKTYDRNFFGPYASISLGIGG*
Ga0187819_104222061	3300017943	Freshwater Sediment	RSRMVAVPNIGAFAGVSWRYANAKVNFGYRADEFFGAMDGGIDTRRSENVGFFGPYANISIGLR
Ga0187819_106388151	3300017943	Freshwater Sediment	THVAPTKQTTSTRFHNRSRMVAVPNVGALFGISYKYRNAKVSFGYRVDEFFNVMDGGIDTRKTYDRGFNGPYATLSIGLGG
Ga0187817_111353352	3300017955	Freshwater Sediment	GPVCTKSSYQTAKSFNRSRMVAVPNIGAFAGISLRYNNAKVSFGYRADEFFGAMDGGIDTSKSYDRGFFGPFAKLSIGIGG
Ga0210395_113443192	3300020582	Soil	FKFVNAKLSLGYRGDFFFGAMDAGWDKEKNKTVGFYGPFATISFGFGG
Ga0210396_100081413	3300021180	Soil	VVPDLGGFAGLSWCVPNAKVAIGYRADFFFGAMDGGIDGAHRENVGFYGPFASISVGLGG
Ga0210396_107291901	3300021180	Soil	PPVDHSRVRTVTIPNAGGFAGVSFRYASAKVSFGYRGDFFFNAMDTGWDTRKSSTVGFYGPFANISIGLGG
Ga0210396_110803851	3300021180	Soil	QSGISFPPFGLFPMTTHYTHVGNPNRSRSVVVPNVGGFAGVSFRLADAKVSFGYRGDFFIGAIDGGLDTAKSYNRGFYGPFANFSIGMGD
Ga0210396_114728871	3300021180	Soil	GYNHPQVNAQRAHTVTVPNVGGFAGVTFSFTNVKVSAGYRGDFFFGAMDTGFDTAKKSTIGFYGPFASVSIGIGG
Ga0210393_112779782	3300021401	Soil	CPATAHHTNAGAVNRSRFVVVPDFGGFAAFSFRYADAKVSFGYRADFFSDAMDVGIEAPKKENVGFYGPFANISIGLGG
Ga0210389_103627261	3300021404	Soil	SRNVMIPNVGGFAGFSFRYDDAKISFGYRGDFFFGAMDGGIDTRKNETLGFNGPYASISVGLGD
Ga0210387_100298991	3300021405	Soil	VIVPNLGGFAGVSFKFRSAKVSLGYRGDFFFGAMDAGNDTRKIKNVGFYGPFATISVGIR
Ga0210387_101941943	3300021405	Soil	IGGFAGVSLKFPNAKISLGYRGDFFFGAMDGGIDVAKKENSGFYGPFATISIGLGG
Ga0210387_103779351	3300021405	Soil	GFAGLSWRVQNFKASMGYRADFFFNALDGGIDTRKSENVGFYGPFASISVGFGG
Ga0210387_107967301	3300021405	Soil	TVIVPNVGSFAGVTYRVENFKVALGYRGDFFFGAMDTGFDTAKRSTIGFYGPFASVSVGLGG
Ga0210387_118711751	3300021405	Soil	PNLGGFAGISYRLQNFKVKLGYRGDFFFDAMDGGINTTHKENLGFYGPFATIGVGLGG
Ga0210390_100231641	3300021474	Soil	NAASHKRSRIVAVPNVGVLFGLSYKYQNAKISFGYRADEFFGAMDGGIDTRKSENRGFNGPYASISIGLGG
Ga0210390_101210122	3300021474	Soil	VNLQRARTVAVPNVGGFAGVTYSFPNVKVSAGYRGDFFFGAMDTGFDTAKKSTIGFYGPFASIGIGIGG
Ga0210390_102334041	3300021474	Soil	VAVPNVGALFGVSYKYQNAKVSFGYRVDEFFGAMDGGIDTRKSENRGFFGPYANISIGLG
Ga0210390_102700453	3300021474	Soil	MAGVSLRFPNAKISLGYRADFFFGAMDGGIDTAHRENVSFYGPFASVSIGLGG
Ga0210390_112673271	3300021474	Soil	DRTRTVAVPNLGGFAGVSWQYRNAKVSFGYRVDEFFGAMDGGVDTYKSENRGFFGPFANISIGLGG
Ga0210390_115480992	3300021474	Soil	MVAVPNVGALFGISYKYQNAKISFGYRADEFFGAMDGGIDTHKSENRGFNGPYATISIGLGG
Ga0210392_103728482	3300021475	Soil	NLSLPVYTHATPVPARSRTVTVPNIGGMAGVSLRFPNAKVSLGYRGDFFFGAMDGGVDAVKKEKVGFYGPFATISVGLGG
Ga0210392_104676182	3300021475	Soil	MIAIPNVGGLAGVSFRYANAKVSFGYRGDFFFGAMDAGIDTRKAETVGFHGPFASISVGLGE
Ga0210392_109671102	3300021475	Soil	DETYRRARAVTVPDIGGSVAITYRVENFKVSAGYRADLFFGAMDTGIDVVKKSNASFYGPFAAISVGLGG
Ga0210398_106830991	3300021477	Soil	VPSVGGIVGAAWRIQNVKASVRCRADLFFGAVDGGIDTAMKENVGFHGPFASVSVDIGG
Ga0210398_107988793	3300021477	Soil	VGGFAGVSFKFPNAKISMGYRGDFFFGAMDTGWDTERTKTVGFYGPFASISFGFGG
Ga0210398_108675381	3300021477	Soil	PGTDRHRSRTVIVPNVGGFAGFTFRLQDFKVSAGYRADFFFGAMDGGVDTAKKENVGFYGPFASVSVGLGG
Ga0210398_115764181	3300021477	Soil	PYPIGYGGHDNVRSVTVPDGGGFAGFSYRYAGAKMSFGYRADFFFGAMDAGIDARKSENVGFYGPFATISVGIGG
Ga0242666_11033742	3300022721	Soil	YQSVNTPVGHHSASPYRSKQVTVPNVGGFAGVSWQYPDAKISVGYRADFFFGAMDGGIDVAHRENVGFYGPFASVSVGLGG
Ga0208076_10516632	3300025464	Arctic Peat Soil	VPNLGGFAGISFCYSNAKISLGYRGDFFFGAMDGGIDAAKKENVGFYGPF
Ga0208220_10022617	3300025627	Arctic Peat Soil	TQHTGMGGFNRSRALVVPNVGGFAGVSFNFTNVKVSVGYRGDFFFGAMDGGIDARKTETVGFYGPFASVSIGLGG
Ga0208220_10046421	3300025627	Arctic Peat Soil	PNVGGFAGVTFSFTDFKVSAGYRGDFFFGAMDTGFDAAKRSTIAFYGPFASVSIGIGG
Ga0208220_10095821	3300025627	Arctic Peat Soil	TNPPDRVRSRTVIVPNVGGFAGLTFRFENFKMSAGYRADLFFGAMDGGIDAAKKENRGFYGPFASVSVGLGG
Ga0208220_10204121	3300025627	Arctic Peat Soil	GFAGLSFNFTNAKVSAGYRGDFFFGAMDTGNDARKTKTVDFYGPFATISIGIGG
Ga0208220_10669291	3300025627	Arctic Peat Soil	ARTVTVPNIGGFAGLTFRLHNFKLSAGYRADLFFGAMDGGIETAKKENRGFYGPFATVSVGLGG
Ga0208220_10918691	3300025627	Arctic Peat Soil	SVTVPNAGGFAGLSFRYSDAKFSVGYRADFFFGAMDGGIDTHKSENVGFYGPFATISVGIGG
Ga0208220_11374931	3300025627	Arctic Peat Soil	PAYHHTGSPNRSRQATVPNLSGFAALSWHYPNAKVSVGYRADMFFGAMDGGVDVAHRQNVGFHGPFASISIGLGG
Ga0208220_11494882	3300025627	Arctic Peat Soil	ADHARTRTVVVPNGGAFAGFSLKVPNAKASIGYRADFFFGAMDGGIDTAHRENVGFYGPFASVSVGIGG
Ga0208480_10036691	3300025633	Arctic Peat Soil	VYQHPVGGHSGVRTVTVPNVGGFAGASYRIENFKVSLGYRADFFFGAMDGGIDAAKKENVGFYGPFMSVSVGLGG
Ga0208589_10717901	3300025634	Arctic Peat Soil	MAGLSFRYSNAKVSFGYRADFFFGAMDGGIDIRQTENVGFHGPFATISIGLGG
Ga0208589_10845621	3300025634	Arctic Peat Soil	SRSVIVPNLGGTAGISVRYSNTKFSLGYRADFFFGAMDGGIDARSTKNVSFHGPFATISLGL
Ga0208357_11103772	3300025703	Arctic Peat Soil	KNVARTRSVVVPNVGGFAGASLRFPNAKISLGYRADFFFGAVDAGVDARRTKTLGFNGPFASISIGFP
Ga0207695_102577303	3300025913	Corn Rhizosphere	AAVERIAGNLLINRESRRVAVPNLGGFAALSYRFTNAKISAGYLADFFFGAMDGGLDTHRSVTTAFHGPFAKISVGLGG
Ga0207695_105739821	3300025913	Corn Rhizosphere	GAFGRSRSVVAPNVGGFAGLTLQRSNAKVSFGYRADFFFGAMDGGLDNRARENVVFHGPFAKVSVGLGG
Ga0207702_115460112	3300026078	Corn Rhizosphere	IGGFAGVSFRYPNAKVSFGYRADFFLGAMDTGINVRHTVDRNFYGPFATISIGLGG
Ga0207702_121668362	3300026078	Corn Rhizosphere	IARSGNPDRSRSVVVPNVGGFAGLSLRYSNAKISLGYRGDFFFGALDGGIDMRKSTTLGFNGPFASISVGIGD
Ga0209517_104555761	3300027854	Peatlands Soil	SVTIPNVGGFAGVTFQKSITKISLGYRADFFFGATDGGIDMAKRVNIGFYGPFATISIGLGG
Ga0209275_101131473	3300027884	Soil	VIVPNLGGFAGVSFKFRNAKVSLGYRGDFFFGAMDAGNDTRKIKNVGFYGPFATISVGIR
Ga0209275_102005172	3300027884	Soil	GAPSRNKEVIVPNLGGFAGVSWRYPSAKISFGYRADMFFGAIDGGVDSRKTYDRGFYGPFASISIGVGG
Ga0209415_107419893	3300027905	Peatlands Soil	HPRVMLYQHSADHDRSRSVVVPNVGGFAGLSFRYSNAKVSFGYRADFFFGAMDGGLDMARKENQGFYGPFASISIGLGG
Ga0265325_102967842	3300031241	Rhizosphere	AFYGPSPAPHDRSRRVAVPNVGGFAGLSLQWNDAKLSLGYRGDFFFNALDTGIDTRRDTTRGYYGPFASISIGLGGPDN
Ga0265340_102890622	3300031247	Rhizosphere	PPSRISSRTVMVPNVGGFAGVSFKFPNVKVSAGYRADLFFGAMDGGIDARKNENRGFYGPFASVSIGLGG
Ga0265340_105426191	3300031247	Rhizosphere	NFGGFAGISYRFSRAALSVGYRADLFSGAIDGGIDTAEKSTLGFHGPFATVSIGIGG
Ga0265339_103925032	3300031249	Rhizosphere	PRSRSVIVPNIGGFAGLSFNYANAKIKFGYRADFFFGAMDGGIDVRKTYDRNFYGPFATISIGLGG
Ga0265331_1000119219	3300031250	Rhizosphere	PPITVYRHTPPDQSRSRSVVVPNVGGFAGLSFNYPNAKISVGYRADFFLGAMDGGIDTRKTYNRNFFGPFATISVGLGG
Ga0265314_100174864	3300031711	Rhizosphere	TFRRSRTVTIPNLGGFAGLSYRFPNARLSAGYRADFFFGAMDRGLDSHKSTTTGFHGPFATISIGLGG
Ga0265314_100256144	3300031711	Rhizosphere	THTFHTSPVRRSRTVIVPNAGGFAGLSVRYPNARVSLGYRAAFFFGAMDGGIDTRKSEAVGFYGPFATISIGLGG
Ga0265314_102676981	3300031711	Rhizosphere	PVIPHVYNFIPMTPYYHHSYNRPRSRSVIVPNIGGFAGLSFNYANAKIKFGYRADFFFGAMDGGIDVRKTYDRNFYGPFATISIGLGG
Ga0265314_103165612	3300031711	Rhizosphere	QSALPITYQRGPVDHTRSRNVVVPNIGGFAGFSVKYPNAKVSFGYKADFFFGAMDGGIDVRRTEDVGFHGPYASVSIGLGG
Ga0265314_103770911	3300031711	Rhizosphere	YHHQPSLVHTSPGKRDILYQTSTSRNRNRFVVVPNIGGFAGLSFRYTNAKVSFGYRADLFFGATDGGIDTAKKENVGFYGPFAAVSIGLP
Ga0265314_104414933	3300031711	Rhizosphere	IGGMAGFSIRFPNAKVSLGYRADFFFGAMDTGSDVRSTSDVGFHGPFATISIGLGG
Ga0265314_105216411	3300031711	Rhizosphere	TEYPDRSPDKHRSRTVTVPNIGAFAGLTYQIQNFKISAGYRADFFFGAMDGGLDTRQTEDEKFYGPFATVSLGL
Ga0265314_105794881	3300031711	Rhizosphere	SRTVVVPDVGGFAGFTFRLQNFKVSAGYRADFFFGPMDGGIDAAKKENVGFYGPFASVSVGMGG
Ga0265314_106143752	3300031711	Rhizosphere	RSVIVPNLGGFANVSAKFPNAKVSLGYRADYFFGAMDGGLDARKSYDRAFRGPFATMSIGLGG
Ga0307474_105330201	3300031718	Hardwood Forest Soil	PNVGALFGISYKYQNAKVSFGYRVDEFFNVMDGGIDTRKTYDRGFNGPYAALSIGLGG
Ga0307474_105628283	3300031718	Hardwood Forest Soil	TVPNIGGFAGISYRLSNAKISMGYRADEFFGARDGGFASENTHNLGFFGPFANISIGLGG
Ga0311301_107115651	3300032160	Peatlands Soil	MLYQHSADHDRSRSVVVPNVGGFAGLSFRYSNAKVSFGYRADFFFGAMDGGLDMARKENQGFYGPFASISIGLGG
Ga0311301_126760371	3300032160	Peatlands Soil	MRSVVVPNLGGFAGLSYRFTNAKLSVGYRADFFFGAMDGGIDAARKENQGFFGPFATISVGLGG

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F077004

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences