NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome / Metatranscriptome Family F076995

Metagenome / Metatranscriptome Family F076995

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F076995
Family Type Metagenome / Metatranscriptome
Number of Sequences 117
Average Sequence Length 68 residues
Representative Sequence IVESMIAVLGLQDLERPEPAAGESSFPFERRFGRLQLDDQNLYATTFSLQFADSGTTQSFWPAAPTGAAEVM
Number of Associated Samples 99
Number of Associated Scaffolds 117

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 0.85 %
% of genes near scaffold ends (potentially truncated) 95.73 %
% of genes from short scaffolds (< 2000 bps) 88.89 %
Associated GOLD sequencing projects 90
AlphaFold2 3D model prediction Yes
3D model pTM-score0.28

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Bacteria (96.581 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil
(17.949 % of family members)
Environment Ontology (ENVO) Unclassified
(41.026 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Plant → Plant rhizosphere
(58.120 % of family members)


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Multiple Sequence Alignments

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 10.00%    β-sheet: 17.00%    Coil/Unstructured: 73.00%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.28
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 117 Family Scaffolds
PF00923TAL_FSA 3.42
PF010733Beta_HSD 1.71
PF07690MFS_1 0.85
PF03795YCII 0.85
PF01261AP_endonuc_2 0.85
PF13946DUF4214 0.85
PF01370Epimerase 0.85
PF01841Transglut_core 0.85
PF13578Methyltransf_24 0.85
PF00144Beta-lactamase 0.85

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 117 Family Scaffolds
COG0176Transaldolase/fructose-6-phosphate aldolaseCarbohydrate transport and metabolism [G] 3.42
COG1680CubicO group peptidase, beta-lactamase class C familyDefense mechanisms [V] 0.85
COG1686D-alanyl-D-alanine carboxypeptidaseCell wall/membrane/envelope biogenesis [M] 0.85
COG2350YciI superfamily enzyme, includes 5-CHQ dehydrochlorinase, contains active-site pHisSecondary metabolites biosynthesis, transport and catabolism [Q] 0.85
COG2367Beta-lactamase class ADefense mechanisms [V] 0.85

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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms96.58 %
UnclassifiedrootN/A3.42 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300000033|ICChiseqgaiiDRAFT_c0482094All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium577Open in IMG/M
3300000787|JGI11643J11755_11201763All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium572Open in IMG/M
3300000956|JGI10216J12902_103674399All Organisms → cellular organisms → Bacteria779Open in IMG/M
3300000956|JGI10216J12902_116705100Not Available600Open in IMG/M
3300000956|JGI10216J12902_121420913All Organisms → cellular organisms → Bacteria → Acidobacteria1184Open in IMG/M
3300004463|Ga0063356_101619164All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium964Open in IMG/M
3300004463|Ga0063356_104136911All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium624Open in IMG/M
3300004479|Ga0062595_101653463All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae → Ruegeria → unclassified Ruegeria → Ruegeria sp. HKCCD8929600Open in IMG/M
3300004479|Ga0062595_102238886All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium537Open in IMG/M
3300005295|Ga0065707_10017122All Organisms → cellular organisms → Bacteria → Acidobacteria2109Open in IMG/M
3300005330|Ga0070690_100813076All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium726Open in IMG/M
3300005332|Ga0066388_103345380All Organisms → cellular organisms → Bacteria → Acidobacteria819Open in IMG/M
3300005353|Ga0070669_100391856All Organisms → cellular organisms → Bacteria → Acidobacteria1135Open in IMG/M
3300005364|Ga0070673_100866972All Organisms → cellular organisms → Bacteria836Open in IMG/M
3300005366|Ga0070659_100647268All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium911Open in IMG/M
3300005367|Ga0070667_102128546All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae → Ruegeria → unclassified Ruegeria → Ruegeria sp. HKCCD8929528Open in IMG/M
3300005459|Ga0068867_101794992All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae → Ruegeria → unclassified Ruegeria → Ruegeria sp. HKCCD8929577Open in IMG/M
3300005468|Ga0070707_101675842All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium603Open in IMG/M
3300005471|Ga0070698_100717011All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium943Open in IMG/M
3300005535|Ga0070684_102165280All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium525Open in IMG/M
3300005543|Ga0070672_101787706All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium552Open in IMG/M
3300005577|Ga0068857_100811215All Organisms → cellular organisms → Bacteria → Acidobacteria894Open in IMG/M
3300005578|Ga0068854_100528778All Organisms → cellular organisms → Bacteria → Acidobacteria997Open in IMG/M
3300005841|Ga0068863_100979986All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium848Open in IMG/M
3300005844|Ga0068862_100022975All Organisms → cellular organisms → Bacteria5221Open in IMG/M
3300006042|Ga0075368_10390565Not Available610Open in IMG/M
3300006049|Ga0075417_10741561All Organisms → cellular organisms → Bacteria → Acidobacteria506Open in IMG/M
3300006058|Ga0075432_10402404All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium591Open in IMG/M
3300006844|Ga0075428_100929515All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium922Open in IMG/M
3300006844|Ga0075428_101728830All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium652Open in IMG/M
3300006846|Ga0075430_100544496All Organisms → cellular organisms → Bacteria → Acidobacteria957Open in IMG/M
3300006876|Ga0079217_11107692Not Available592Open in IMG/M
3300006894|Ga0079215_11453691All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae → Ruegeria → unclassified Ruegeria → Ruegeria sp. HKCCD8929538Open in IMG/M
3300006969|Ga0075419_11338754All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium533Open in IMG/M
3300007004|Ga0079218_11258993All Organisms → cellular organisms → Bacteria → Acidobacteria774Open in IMG/M
3300009094|Ga0111539_12604441All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae → Ruegeria → unclassified Ruegeria → Ruegeria sp. HKCCD8929586Open in IMG/M
3300009098|Ga0105245_12651574All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae → Ruegeria → unclassified Ruegeria → Ruegeria sp. HKCCD8929554Open in IMG/M
3300009177|Ga0105248_10132418All Organisms → cellular organisms → Bacteria → Acidobacteria2813Open in IMG/M
3300009553|Ga0105249_10497773All Organisms → cellular organisms → Bacteria → Acidobacteria1263Open in IMG/M
3300009789|Ga0126307_10586352All Organisms → cellular organisms → Bacteria → Acidobacteria900Open in IMG/M
3300010045|Ga0126311_10061586All Organisms → cellular organisms → Bacteria → Acidobacteria2453Open in IMG/M
3300010397|Ga0134124_10075615All Organisms → cellular organisms → Bacteria → Acidobacteria2884Open in IMG/M
3300010400|Ga0134122_12113970All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium604Open in IMG/M
3300011119|Ga0105246_11259065All Organisms → cellular organisms → Bacteria → Acidobacteria684Open in IMG/M
3300011444|Ga0137463_1148607All Organisms → cellular organisms → Bacteria → Acidobacteria882Open in IMG/M
3300012501|Ga0157351_1069370All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae → Ruegeria → unclassified Ruegeria → Ruegeria sp. HKCCD8929502Open in IMG/M
3300012897|Ga0157285_10279790All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium559Open in IMG/M
3300012899|Ga0157299_10299259All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium532Open in IMG/M
3300012899|Ga0157299_10347962All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium508Open in IMG/M
3300012905|Ga0157296_10424352All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae → Ruegeria → unclassified Ruegeria → Ruegeria sp. HKCCD8929504Open in IMG/M
3300012912|Ga0157306_10109877All Organisms → cellular organisms → Bacteria813Open in IMG/M
3300012912|Ga0157306_10415765All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium530Open in IMG/M
3300013297|Ga0157378_10033599All Organisms → cellular organisms → Bacteria4535Open in IMG/M
3300013297|Ga0157378_12137925All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium611Open in IMG/M
3300013306|Ga0163162_10547022All Organisms → cellular organisms → Bacteria → Acidobacteria1286Open in IMG/M
3300013306|Ga0163162_13245278All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium522Open in IMG/M
3300014326|Ga0157380_11696246All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium689Open in IMG/M
3300014879|Ga0180062_1167591All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae → Ruegeria → unclassified Ruegeria → Ruegeria sp. HKCCD8929504Open in IMG/M
3300015373|Ga0132257_103696703All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium557Open in IMG/M
3300015374|Ga0132255_103917259All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium632Open in IMG/M
3300017997|Ga0184610_1188218All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium687Open in IMG/M
3300018067|Ga0184611_1009488All Organisms → cellular organisms → Bacteria2722Open in IMG/M
3300018432|Ga0190275_12517540All Organisms → cellular organisms → Bacteria592Open in IMG/M
3300018466|Ga0190268_12124689All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae → Ruegeria → unclassified Ruegeria → Ruegeria sp. HKCCD8929522Open in IMG/M
3300018469|Ga0190270_12442897All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium584Open in IMG/M
3300018476|Ga0190274_10830154All Organisms → cellular organisms → Bacteria985Open in IMG/M
3300018476|Ga0190274_11310997All Organisms → cellular organisms → Bacteria → Acidobacteria811Open in IMG/M
3300018476|Ga0190274_12435719All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium620Open in IMG/M
3300018476|Ga0190274_12796247All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium584Open in IMG/M
3300018476|Ga0190274_12979137All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium568Open in IMG/M
3300018481|Ga0190271_10493595All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales1334Open in IMG/M
3300019356|Ga0173481_10249560All Organisms → cellular organisms → Bacteria798Open in IMG/M
3300019377|Ga0190264_10426349All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium873Open in IMG/M
3300019377|Ga0190264_11227059All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium625Open in IMG/M
3300022915|Ga0247790_10150070All Organisms → cellular organisms → Bacteria → Acidobacteria600Open in IMG/M
3300025905|Ga0207685_10747341All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium535Open in IMG/M
3300025908|Ga0207643_10269081All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1054Open in IMG/M
3300025917|Ga0207660_10370798All Organisms → cellular organisms → Bacteria → Acidobacteria1150Open in IMG/M
3300025923|Ga0207681_10104809All Organisms → cellular organisms → Bacteria → Acidobacteria2046Open in IMG/M
3300025925|Ga0207650_11872938All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium507Open in IMG/M
3300025931|Ga0207644_10224961All Organisms → cellular organisms → Bacteria → Acidobacteria1489Open in IMG/M
3300025938|Ga0207704_11350126All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium610Open in IMG/M
3300025960|Ga0207651_10364678All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1220Open in IMG/M
3300025960|Ga0207651_11378286All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium634Open in IMG/M
3300025961|Ga0207712_10379845All Organisms → cellular organisms → Bacteria → Acidobacteria1182Open in IMG/M
3300025972|Ga0207668_10463503All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae → Ruegeria → unclassified Ruegeria → Ruegeria sp. HKCCD89291084Open in IMG/M
3300026023|Ga0207677_11865487All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium558Open in IMG/M
3300026075|Ga0207708_10381300Not Available1162Open in IMG/M
3300026088|Ga0207641_10092084All Organisms → cellular organisms → Bacteria → Acidobacteria2654Open in IMG/M
3300026118|Ga0207675_101134708All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium802Open in IMG/M
3300026118|Ga0207675_101970773All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium602Open in IMG/M
3300027818|Ga0209706_10347300All Organisms → cellular organisms → Bacteria → Acidobacteria696Open in IMG/M
3300027873|Ga0209814_10008712All Organisms → cellular organisms → Bacteria3967Open in IMG/M
3300027880|Ga0209481_10557636All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium593Open in IMG/M
3300028380|Ga0268265_10845249All Organisms → cellular organisms → Bacteria → Acidobacteria895Open in IMG/M
3300028381|Ga0268264_12660669All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae → Ruegeria → unclassified Ruegeria → Ruegeria sp. HKCCD8929504Open in IMG/M
3300028803|Ga0307281_10353971All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium556Open in IMG/M
3300028803|Ga0307281_10386487All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae → Ruegeria → unclassified Ruegeria → Ruegeria sp. HKCCD8929534Open in IMG/M
3300028889|Ga0247827_10279612All Organisms → cellular organisms → Bacteria → Acidobacteria964Open in IMG/M
3300031229|Ga0299913_12046708All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium518Open in IMG/M
3300031547|Ga0310887_10404260All Organisms → cellular organisms → Bacteria → Acidobacteria804Open in IMG/M
3300031562|Ga0310886_10027351All Organisms → cellular organisms → Bacteria2366Open in IMG/M
3300031731|Ga0307405_10085031All Organisms → cellular organisms → Bacteria → Acidobacteria2078Open in IMG/M
3300031740|Ga0307468_100988633All Organisms → cellular organisms → Bacteria → Acidobacteria739Open in IMG/M
3300031740|Ga0307468_101966044All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium559Open in IMG/M
3300031858|Ga0310892_11141501All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae → Ruegeria → unclassified Ruegeria → Ruegeria sp. HKCCD8929554Open in IMG/M
3300031892|Ga0310893_10095668All Organisms → cellular organisms → Bacteria → Acidobacteria1081Open in IMG/M
3300031908|Ga0310900_10602248All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium869Open in IMG/M
3300031911|Ga0307412_11527024All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium608Open in IMG/M
3300032002|Ga0307416_102043121All Organisms → cellular organisms → Bacteria → Acidobacteria675Open in IMG/M
3300032005|Ga0307411_11522481All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae → Ruegeria → unclassified Ruegeria → Ruegeria sp. HKCCD8929615Open in IMG/M
3300032122|Ga0310895_10007365All Organisms → cellular organisms → Bacteria → Acidobacteria3137Open in IMG/M
3300032144|Ga0315910_11010720All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium649Open in IMG/M
3300032180|Ga0307471_103204107All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium580Open in IMG/M
3300034149|Ga0364929_0079970All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_40CM_65_141016Open in IMG/M
3300034661|Ga0314782_051028All Organisms → cellular organisms → Bacteria → Acidobacteria824Open in IMG/M
3300034818|Ga0373950_0170580All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae → Ruegeria → unclassified Ruegeria → Ruegeria sp. HKCCD8929507Open in IMG/M


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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil17.95%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere7.69%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere7.69%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural → Soil6.84%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere5.98%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil4.27%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere3.42%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere3.42%
RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere3.42%
Agricultural SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil2.56%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil2.56%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere2.56%
SoilEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Soil1.71%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment1.71%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil1.71%
Serpentine SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil1.71%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil1.71%
Corn RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere1.71%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere1.71%
Corn RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere1.71%
Arabidopsis Thaliana RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere1.71%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere1.71%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere1.71%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere1.71%
Freshwater SedimentEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment0.85%
Unplanted SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Unplanted Soil0.85%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere0.85%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil0.85%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Uranium Contaminated → Soil0.85%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil0.85%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere0.85%
SedimentEnvironmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment0.85%
Populus EndosphereHost-Associated → Plants → Roots → Bulk Soil → Unclassified → Populus Endosphere0.85%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere0.85%
Rhizosphere SoilHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere Soil0.85%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere0.85%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere0.85%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300000033Soil microbial communities from Great Prairies - Iowa, Continuous Corn soilEnvironmentalOpen in IMG/M
3300000787Soil microbial communities from Great Prairies - Iowa, Continuous Corn soilEnvironmentalOpen in IMG/M
3300000956Soil microbial communities from Great Prairies - Kansas, Native Prairie soilEnvironmentalOpen in IMG/M
3300004463Combined assembly of Arabidopsis thaliana microbial communitiesHost-AssociatedOpen in IMG/M
3300004479Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAsEnvironmentalOpen in IMG/M
3300005295Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3EnvironmentalOpen in IMG/M
3300005330Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaGEnvironmentalOpen in IMG/M
3300005332Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300005353Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaGHost-AssociatedOpen in IMG/M
3300005364Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaGHost-AssociatedOpen in IMG/M
3300005366Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaGHost-AssociatedOpen in IMG/M
3300005367Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaGHost-AssociatedOpen in IMG/M
3300005459Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2Host-AssociatedOpen in IMG/M
3300005468Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaGEnvironmentalOpen in IMG/M
3300005471Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaGEnvironmentalOpen in IMG/M
3300005535Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaGEnvironmentalOpen in IMG/M
3300005543Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaGHost-AssociatedOpen in IMG/M
3300005577Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2Host-AssociatedOpen in IMG/M
3300005578Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2Host-AssociatedOpen in IMG/M
3300005841Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2Host-AssociatedOpen in IMG/M
3300005844Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2Host-AssociatedOpen in IMG/M
3300006042Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3Host-AssociatedOpen in IMG/M
3300006049Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1Host-AssociatedOpen in IMG/M
3300006058Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1Host-AssociatedOpen in IMG/M
3300006844Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2Host-AssociatedOpen in IMG/M
3300006846Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4Host-AssociatedOpen in IMG/M
3300006876Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS200EnvironmentalOpen in IMG/M
3300006894Agricultural soil microbial communities from Utah to study Nitrogen management - NC ControlEnvironmentalOpen in IMG/M
3300006969Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3Host-AssociatedOpen in IMG/M
3300007004Agricultural soil microbial communities from Utah to study Nitrogen management - NC CompostEnvironmentalOpen in IMG/M
3300009094Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)Host-AssociatedOpen in IMG/M
3300009098Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaGHost-AssociatedOpen in IMG/M
3300009177Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaGHost-AssociatedOpen in IMG/M
3300009553Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaGHost-AssociatedOpen in IMG/M
3300009789Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot28EnvironmentalOpen in IMG/M
3300010045Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot61EnvironmentalOpen in IMG/M
3300010397Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4EnvironmentalOpen in IMG/M
3300010400Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2EnvironmentalOpen in IMG/M
3300011119Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaGHost-AssociatedOpen in IMG/M
3300011444Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT800_2EnvironmentalOpen in IMG/M
3300012501Unplanted soil (control) microbial communities from North Carolina - M.Soil.4.yng.170610EnvironmentalOpen in IMG/M
3300012897Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S074-202C-1EnvironmentalOpen in IMG/M
3300012899Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S058-202B-2EnvironmentalOpen in IMG/M
3300012905Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S013-104B-2EnvironmentalOpen in IMG/M
3300012912Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S163-409C-2EnvironmentalOpen in IMG/M
3300013297Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaGHost-AssociatedOpen in IMG/M
3300013306Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaGHost-AssociatedOpen in IMG/M
3300014326Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaGHost-AssociatedOpen in IMG/M
3300014879Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLIBT45_16_10DEnvironmentalOpen in IMG/M
3300015373Combined assembly of cpr5 rhizosphereHost-AssociatedOpen in IMG/M
3300015374Col-0 rhizosphere combined assemblyHost-AssociatedOpen in IMG/M
3300017997Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_100_coexEnvironmentalOpen in IMG/M
3300018067Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_5_coexEnvironmentalOpen in IMG/M
3300018432Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 550 TEnvironmentalOpen in IMG/M
3300018466Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 TEnvironmentalOpen in IMG/M
3300018469Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 TEnvironmentalOpen in IMG/M
3300018476Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 TEnvironmentalOpen in IMG/M
3300018481Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 356 TEnvironmentalOpen in IMG/M
3300019356Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S073-202C-2 (version 2)EnvironmentalOpen in IMG/M
3300019377Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 112 TEnvironmentalOpen in IMG/M
3300022915Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S171-409R-4EnvironmentalOpen in IMG/M
3300025905Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025908Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300025917Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025923Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025925Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025931Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025938Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300025960Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025961Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025972Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300026023Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026075Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300026088Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026118Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300027818Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 19-21cm September2015 (SPAdes)EnvironmentalOpen in IMG/M
3300027873Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1 (SPAdes)Host-AssociatedOpen in IMG/M
3300027880Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3 (SPAdes)Host-AssociatedOpen in IMG/M
3300028380Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300028381Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300028803Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_120EnvironmentalOpen in IMG/M
3300028889Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day2EnvironmentalOpen in IMG/M
3300031229Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT155D38EnvironmentalOpen in IMG/M
3300031547Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D4EnvironmentalOpen in IMG/M
3300031562Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D3EnvironmentalOpen in IMG/M
3300031731Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1Host-AssociatedOpen in IMG/M
3300031740Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05EnvironmentalOpen in IMG/M
3300031858Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D2EnvironmentalOpen in IMG/M
3300031892Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D2EnvironmentalOpen in IMG/M
3300031908Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D1EnvironmentalOpen in IMG/M
3300031911Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1Host-AssociatedOpen in IMG/M
3300032002Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3Host-AssociatedOpen in IMG/M
3300032005Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1Host-AssociatedOpen in IMG/M
3300032122Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D4EnvironmentalOpen in IMG/M
3300032144Garden soil microbial communities collected in Santa Monica, California, United States - Edamame soilEnvironmentalOpen in IMG/M
3300032180Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515EnvironmentalOpen in IMG/M
3300034149Sediment microbial communities from East River floodplain, Colorado, United States - 20_j17EnvironmentalOpen in IMG/M
3300034661Metatranscriptome of lab incibated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60R3 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300034818Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_3Host-AssociatedOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
ICChiseqgaiiDRAFT_048209413300000033SoilSMIALLALQDLGRPPAGAGEYSFPVERRPGHLQLDDDNLYATSFTLRFSDSGTTRQFWPLTTPGDFEVM*
JGI11643J11755_1120176313300000787SoilIAVLGLQSLSRPDPRSGETDFPCERRFGRLQLDDQNLYAMTFSLQFADSGTTQLFWPSASAGAVEVM*
JGI10216J12902_10367439913300000956SoilRYVSPVIIVESVIALLGLQDLARPEPAPGEPSFPLERRFGRLQLDDQNLYTTTFSLRFADSGTTRRFWPLAN*
JGI10216J12902_11670510023300000956SoilLGLQDLARPRPRAGEHARPLERRFGRLQLDDQNLYATTFSLKFADDGSTREFWPPV*
JGI10216J12902_12142091323300000956SoilIIVESMIALLGLQDLARPEPRPGEAAVPLERRFGRLQLDDQNLYTTTFSLKFADSGTTERFWP*
Ga0063356_10161916413300004463Arabidopsis Thaliana RhizosphereLQRPQPRAGEPAFPLERRFGRMQLDDNNLYATTFSLQFSDSGTTRQFYPLAAH*
Ga0063356_10413691123300004463Arabidopsis Thaliana RhizosphereWNRHTCLGQYVSPVVIVESLVALLALQGLKRPEPRTGDSSFPYERRFGHLQLDDQNLYATTFSLQFADSGTTRQFWPVTSLR*
Ga0062595_10165346323300004479SoilLGLQDLSRPDPAPGEPTFPFERRFGRLQLDDQNLYATTFSLRFADAGTTRLFWPLAAAGNAEVI*
Ga0062595_10223888623300004479SoilERPEPQPGELAFPLERRFGRMQLDDNNLYATTFSLRFSDSGTTRQFYPPAAH*
Ga0065707_1001712223300005295Switchgrass RhizosphereIVESMIVVLGLQGLTRPEPRAGELEFPFERRFGRLQLDDQNLYATTFSLQFADSGTTQSFWPAAPTGAAEVM*
Ga0070690_10081307623300005330Switchgrass RhizosphereHVSPVIIVESIIAVLGLQDLSRPDPAFGEPAFPLERRFGRLQLDDQNLYATTFSLRFADAGTTRLFWPLAAAGNAEVI*
Ga0066388_10334538013300005332Tropical Forest SoilESIIAVLGLQDLSRPDPAPGESAFPFERRFGRLQLDDQNLYATTFSLRFADAGTTRLFWPLAAGNAEVI*
Ga0070669_10039185613300005353Switchgrass RhizosphereSPVVIVETMIAVLGLQSLARPEPRAGESSFPFERRFGRLQLDDQNLYATTFSLQFADSGTTQLFWPSASAGTAEVM*
Ga0070673_10086697213300005364Switchgrass RhizosphereVESMIAVLGLQDLARPRPRVGEHARPLERRFGRLQLDDQNLYATTFSLKFADEGSTREFWPAV*
Ga0070659_10064726823300005366Corn RhizosphereLERPEPGPGELAFPLERRFGRMQLDDNNLYAKTFSLRFSDTGTTRKFYPATTDRH*
Ga0070667_10212854613300005367Switchgrass RhizosphereVIVETMIAVLGLQSLARPEPRAGESSFPFERRFGRLQLDDQNLYATTFSLQFADSGTTQLFWPSASAGTAEVM*
Ga0068867_10179499213300005459Miscanthus RhizosphereVSPVIIVESMIVALGLQGLTRPEPRAGELEFPFERRFGRLQLDDQNLYATTFSLQFADSGTTQSFWPAAPTGAAEVM*
Ga0070707_10167584213300005468Corn, Switchgrass And Miscanthus RhizosphereIVESMIAVLGLQDLERPEPAAGESSFPFERRFGRLQLDDQNLYATTFSLQFADSGTTQSFWPAAPTGAAEVM*
Ga0070698_10071701113300005471Corn, Switchgrass And Miscanthus RhizosphereALLGLQDLGRPEPRAGEPSFPFERRFGWLQLDDQNLYTTTFSLRFADSGTTRRFWPLTASS*
Ga0070684_10216528023300005535Corn RhizosphereRPEPGPGELAFPLERRFGRMQLDDNNLYAKTFSLRFSDTGTTRKFYPATTDRH*
Ga0070672_10178770613300005543Miscanthus RhizosphereIIVESMVALLGLQDLGRPEPRAGEPSFPFERRFGRLQFDDQNLYTTTFSLQFSDSGTTQRFWPLTAAS*
Ga0068857_10081121513300005577Corn RhizosphereGQHVSPVIIVESMIGVLGLQDLSRPDPNPGESSFPFERRFGRLQLDDQNLYATTFSLRFADGGTTRLFWPSAPASTVEVI*
Ga0068854_10052877813300005578Corn RhizosphereSPVIIVESIIAVLGLQDLSRPDPAFGEPAFPLERRFGRLQLDDQNLYATTFSLRFADAGTTRQFWPLAAAGNAEVI*
Ga0068863_10097998623300005841Switchgrass RhizospherePEPGPGELAFPLERRFGRMQLDDDNLYAKTFSLRFSDTGTTRKFYPATTDRH*
Ga0068862_10002297543300005844Switchgrass RhizosphereIIVESMIAVLGLQDLARPEPAAGESSFPFERRFGRLQLDDQNLYATAFSLRFADAGTTRLFWPVAPAGNVEVM*
Ga0075368_1039056513300006042Populus EndosphereAVLGLQDLARPRPRAGEHARPLERRFGRLQLDDQNLYATTFSLKFADEGSTREFWPAV*
Ga0075417_1074156123300006049Populus RhizosphereIALLGLQDLSRPEPRPGEPAFPFERRFGRLQLDDQNLYATTFTLQFADAGTTRLFWPFVPAADVEVL*
Ga0075432_1040240423300006058Populus RhizosphereRHTCLGQHVSPVIIIESVAAVLALEGLQRPEPRPGERSFPLERRFGRMQLDDNNLYATTFSLQFSDSGTTRQFYPPTAH*
Ga0075428_10092951513300006844Populus RhizosphereMIALLGLQDLKRPAAVPGESSFPFERRFGRLQLDDQNLYATTFSLQFSDSGTTRRFWP*
Ga0075428_10172883023300006844Populus RhizosphereMIAVLGLQGLSRPEPRAGELEFPFERRFGRLQLDDQNLYATTFSLQFADSGTTQLFWPPSAGSVEVM*
Ga0075430_10054449613300006846Populus RhizosphereSLARPEPRAGEPSFPFERRFGRLQLDDQNLYATTFSLQFADSGTTQLFWPPSAGSVEVM*
Ga0079217_1110769223300006876Agricultural SoilSPVIVVETMVALLALQDLSRAEARPGEPSFPLERRRGRLQLDDQNLYATSLEVEYSDSGTTRQFWPLAAADAEVM*
Ga0079215_1145369113300006894Agricultural SoilYGWDRHTCLGQYVSPVVIVESMIVILGLQDLSRPAPGPGETAFPFERRFGRLQLDENNLYATTFALRFADSGTTQLFWPATAAAADEVI*
Ga0075419_1133875423300006969Populus RhizospherePVIAVLGLQSLARPEPRAGEPSFPFERRFGRLQLDDQNLYATTFSLQFADSGTTQLFWPPSAGSVEVM*
Ga0079218_1125899313300007004Agricultural SoilVESMVALLGLQDLVRPAAREGEATFPSERRFGRLQLDDQNLYATTFSLAFTDAGTTRRFWPMAPGAPAENVEVM*
Ga0111539_1260444123300009094Populus RhizosphereAVLGLQDLSRPDPAPGESSFPFERRFGRLQLDDQNLYATTFSLRFADAGSTRLFWPHAAAGKVEVI*
Ga0105245_1265157413300009098Miscanthus RhizosphereRHTCLGQHVSPVIIIESMAAVLGLQDVGRPEPQPGEPSFPLERRFGRLQLDDQNLYAKTFSLRFSDSGTTRQFWPVASH*
Ga0105248_1013241833300009177Switchgrass RhizosphereIAMLALEGLERPEPGPGELAFPLERRFGRMQLDDNNLYAKTFSLRFSDTGTTRKFYPATTDRH*
Ga0105249_1049777323300009553Switchgrass RhizosphereLGQHVSPVIIVESMIGVLGLQDLSRPDPNPGESSFPFERRFGRLQLDDQNLYATTFSLRFADGGTTRLFWPSAPASTVEVI*
Ga0126307_1058635223300009789Serpentine SoilQYVSPLIIVESMIALFGLLDLRRPEPRPGDTAFPLERRFGRLQFDDQNLYSTTFSLQFADSV*
Ga0126311_1006158613300010045Serpentine SoilHTCLGQYVSPVIIIETMIALLGLQDLERPEPRPGERSFPVERRFGRLQLDDQNLYTTTFSLRFSDSGTTAQLWPAAAGV*
Ga0134124_1007561533300010397Terrestrial SoilVESLIAMLALEGLERPEPGPGELAFPLERRFGRMQLDDNNLYAKTFSLRFSDTGTTRKFYPATTDRH*
Ga0134122_1211397013300010400Terrestrial SoilVIIVETMIAVLGLQSLSRPDPRSGETDFPCERRFGRLQLDDQNLYAMTFSLQFADSGTTQLFWPSASAGAVEVM*
Ga0105246_1125906513300011119Miscanthus RhizosphereRPEPRAGELEFPFERRFGRLQLDDQNLYATTFSLQFADSGTTQSFWPATPSGAAEVM*
Ga0137463_114860723300011444SoilSMMAPLALQDLRPPEAAAGEPSLPFERRFGRLQLDDQNLYATTFSLQFTDSGTTRRFWP*
Ga0157351_106937013300012501Unplanted SoilVSPVIIVESIIAVLGLQDLSRPDPAPGEPAFPLERRFGRLQLDDQNLYATTFSLRFADAGTTRQFWPLAAAGNAEVI*
Ga0157285_1027979013300012897SoilIAVLGLQDLSRPDPAPGEPTFPFERRFGRLQLDDQNLYATTFSLRFADAGTTRLFWPLAAAGNAEVI*
Ga0157299_1029925923300012899SoilDLGRPEPQAGEPSFPFERRFGRLQLDDQNLYTTTFSLRFADSGTTRRFWPLTASS*
Ga0157299_1034796223300012899SoilVSPVIIVETMIALLGLQDLERPEARPGESSFPFERRFGRLQLDDQNLYTTTFSLRFSDSGTTKRFWPATTGN*
Ga0157296_1042435223300012905SoilGQHVSPVIIIESMAAVLGLQDVGRPEPQPGEPSFPLERRFGRLQLDDQNLYAKTFSLRFSDSGTTRQFWPVASH*
Ga0157306_1010987723300012912SoilSPVVIVESMVALLALQDLGRPEPRAGDSSFPYERRFGHLQLDDQNLYTTTFSLRFADAGTTRHFWPVTPLS*
Ga0157306_1041576523300012912SoilVLGLQSLSRPDPRSGETDFPCERRFGRLQLDDQNLYAMTFSLQFADSGTTQLFWPSASAGAVEVM*
Ga0157378_1003359943300013297Miscanthus RhizosphereSPMIIMESLIALLALDGLERPEPQPDELAFPLERRFGRMQLDDNNLYATTFSLRFSDTGTTRQFYPPDAH*
Ga0157378_1213792523300013297Miscanthus RhizosphereLQDLSRPDPAFGEPAFPLERRFGRLQLDDQNLYATTFSLRFADAGTTRLFWPLAAAGNAEVI*
Ga0163162_1054702223300013306Switchgrass RhizosphereSPVIIVESMIVVLGLQGLTRPEPRAGELEFPFERRFGRLQLDDQNLYATTFSLQFADSGTTQSFWPAAPTGAAEVM*
Ga0163162_1324527823300013306Switchgrass RhizosphereIGRPEPNAGEPSFPLERRFGRLQLDDQNLYAKTFSLRFSDSGTTRQFWPVASH*
Ga0157380_1169624613300014326Switchgrass RhizosphereHVSPVVIVETMIALLGLQDLARPAPGAGEPSAPFERRRGRLQLDDQNLYATSLVLQYSDSGTTLQFWPLAGSGAEVM*
Ga0180062_116759123300014879SoilPVIIVESLVALLGLPDLRRPDPRAGETAFPLERRFGRLQLDDQNLYATTFSLRFTDAGGARSAGPGPSRS*
Ga0132257_10369670313300015373Arabidopsis RhizospherePVIIVESMIALLGLQDLARPEAGPGEAAFPLERRFGRLQLDDQNLYATTFSLRFADSGTTRMFWPLAAAGAVEVI*
Ga0132255_10391725923300015374Arabidopsis RhizosphereALGLQGLTRPEPRAGELEFPFERRFGRLQLDDQNLYATTFSLQFADSGTTQSFWPAAPTGAAEVM*
Ga0184610_118821823300017997Groundwater SedimentAALLALQDLGRPEPGGSDSSFPFERRFGHLQLDDQNLYTTTFSLRFADAGTTRHFWPLTSRS
Ga0184611_100948833300018067Groundwater SedimentLLGLQDLERPEARPGEPSFPFERRFGRLQLDDQNLYTTTFSLRFSDSGTTKRFWPGTGN
Ga0190275_1251754013300018432SoilLGLQDLARPRPRAGEHARPLERRFGRLQLDDQNLYATTFSLKFADEGSTREFWP
Ga0190268_1212468913300018466SoilIIVESMVALLALQSLTRPLPRAGEPAIPLDRRFGRFQLDDQNLYATTFSLRFADSGTTRLYWPFTSGAGVEVI
Ga0190270_1244289723300018469SoilQYVSPVIIVESMIALLGLQDLARPDPRPGESAFPFERRFGRLQLDDQNLYATTFSLRFADTGTTRRFWPTAAGN
Ga0190274_1083015413300018476SoilVVIVESMVALLGLQDLRRPEPAAGDSSFPFERRFGHLQLDDQNLYTTTFSLQFTDAGTTRQFWPVSSPN
Ga0190274_1131099713300018476SoilLLGLQDLGRADARAGEPAFPFERRTGQLQLDDQNLYATTFVLRFADSGTTRRFWPAN
Ga0190274_1243571923300018476SoilPVIIVESMVALLGLQDLGRPEPRAGEPTFPFERRFGRLQFDDQNLYTTTFSLRFADSGTTRRFWPLTARS
Ga0190274_1279624713300018476SoilTMIALLGLQDLERPEARSGEPSFPFERRFGRLQLDDQNLYTTTFSLRFSDSGTTKRFWPN
Ga0190274_1297913723300018476SoilVETMIALLGLQDLARPAPGAGEPSVPFERRRGRLQLDDQNLYATSFVLQYSDSGTTLQFWPLAGAGAEVT
Ga0190271_1049359513300018481SoilLIVESMIVVLALQDLARPDVGAGESSFPLERRVGHLQLDDNNLYATTFSLRLEDSGTTRKYWPATRAAS
Ga0173481_1024956023300019356SoilVSPVIIVESMIAVLGLQDLARPRPRAGEHARPLERRFGRLQLDDQNLYATTFSLKFADEGSTREFWPAV
Ga0190264_1042634913300019377SoilVSPVIIMESMVVMLGLQDLGRPAARAGERSFPLERRTGHLQLDDNNLYATTFSLQFADSGTTQLFWPGTPAAADEVI
Ga0190264_1122705913300019377SoilVVIVEAMIAILGLQDLSRPAAGAGETAFPFERRFGRLQLDDNNLYATSFALQFADSGTTPLFWPVTAATGKEVM
Ga0247790_1015007013300022915SoilVSPVIIVESMIVVLGLQGLTRPEPRAGELEFPFERRFGRLQLDDQNLYATTFSLQFADSGTTQSFWPAAPTGAAEVM
Ga0207685_1074734113300025905Corn, Switchgrass And Miscanthus RhizosphereGRHTCLGQHVSPLIIMESLTALLALEGLERPEPQPGELAFPLERRFGRMQLDDNNLYATTFSLRFSDSGTTRQFYSPAAR
Ga0207643_1026908123300025908Miscanthus RhizosphereALEGLERPEPGPGELAFPLERRFGRMQLDDNNLYSKTFSLRFSDTGTTRKFYPATTDRH
Ga0207660_1037079813300025917Corn RhizosphereLARPEPAAGESSFPFERRFGRLQLDDQNLYATTFSLQFADSGTTQSFWPAAPTGAEVM
Ga0207681_1010480913300025923Switchgrass RhizosphereLQDLSRPDSAPGEPAFPLERRFGRLQLDDQNLYATTFSLRFADAGTTRQFWPLAAAGNAEVI
Ga0207650_1187293813300025925Switchgrass RhizosphereDLGRPEPRAGEPSFPFERRFGRLQFDDQNLYTTTFSLRFADSGTTQRFWPLTAGS
Ga0207644_1022496123300025931Switchgrass RhizosphereVLGLQGLTRPEPRAGELEFPFERRFGRLQLDDQNLYATTFSLQFADSGTTQSFWPAAPTGAAEVM
Ga0207704_1135012613300025938Miscanthus RhizospherePVIIVESLIAMLALEGLERPEPGPGELAFPLERRFGRMQLDDNNLYAKTFSLRFSDTGTTRKFYPATTDR
Ga0207651_1036467813300025960Switchgrass RhizospherePISPLIIMESLIALLALEGLERPEPQPGELAFPLERRFGRMQLDENNLYASTFSLRFSDTGTTRQFYPPAGH
Ga0207651_1137828623300025960Switchgrass RhizosphereSPLIIMESLTALLALEGLERPEPQPGELAFPLERRFGRMQLDDNNLYATTFSLRFSDSGTTRQFYPPAAH
Ga0207712_1037984523300025961Switchgrass RhizosphereGLQGLTRPEPRAGELEFPFERRFGRLQLDDQNLYATTFSLQFADSGTTQSFWPAAPTGAAEVM
Ga0207668_1046350323300025972Switchgrass RhizosphereVIIIESMAAVLGLQDVGRPEPRPGEPSFPLERRFGRLQLDDQNLYAKTFSLRFSDSGTTRQFWPVASH
Ga0207677_1186548713300026023Miscanthus RhizosphereSPVIIVESIIAVLGLQDLSRPDPAPGEPAFPLERRFGRLQLDDQNLYATTFSLRFADAGTTRQFWPLAAAGNAEVI
Ga0207708_1038130023300026075Corn, Switchgrass And Miscanthus RhizosphereLQDLKRPEPKPGEPSFPFERRFGRVQFDDQNLYTTTFSLAFTDSGTTQRYHL
Ga0207641_1009208413300026088Switchgrass RhizosphereAVLGLQDLSRPDPAPGEPAFPLERRFGRLQLDDQNLYATTFSLRFADAGTTRLFWPLAAAGNAEVI
Ga0207675_10113470813300026118Switchgrass RhizosphereQHVSPVIIIESVAAVLALEGLQRPEPRPGERSFPLERRFGRMQLDDNNLYATTFSLQFSDSGTTRQFYPPTAH
Ga0207675_10197077313300026118Switchgrass RhizosphereQHVSPVIIVESMIGVLGLQDLSRPDPNPGESSFPFERRFGRLQLDDQNLYATTFSLRFADGGTTRLFWPSAPASTVEVI
Ga0209706_1034730013300027818Freshwater SedimentAALLALQDLRRPEPRAGESSFPFERRFGRLQLDDQNLYATTFSVAFSDSGTTRQFWPATSSN
Ga0209814_1000871213300027873Populus RhizosphereSMVALLGLQDLSRPQPRPGEQSFPFERRFGRFQLDDQNLYAATFSLQFADSGTTRLFWPIGSAAEVI
Ga0209481_1055763613300027880Populus RhizosphereSMIAVLGLQSLARPEPRAGEPSFPFERRFGRLQLDDQNLYATTFSLQFADSGTTQLFWPPSAGSVEVM
Ga0268265_1084524913300028380Switchgrass RhizosphereIVETMIAVLGLQSLSRPDPRSGETDFPCERRFGRLQLDDQNLYAMTFSLQFADSGTTQLFWPSASAGAVEVM
Ga0268264_1266066923300028381Switchgrass RhizosphereSPVIIIESMAAVLGLQDIGRPEPNAGEPSFPLERRFGRLQLDDQNLYAKTFSLRFSDSGTTRQFWPVASH
Ga0307281_1035397113300028803SoilGQYVSPVIIVESMVALLGLQDLGRPEPRAGEPSFPFERRFGRLQFDDQNLYTTTFSLRFSDSGTTRRFWPLTAGS
Ga0307281_1038648713300028803SoilGWQRHTCLGQYVSPVVIVESMIALLGLQNLRRPEPKAGEPAFPFERRFGRVQFDDQNLYTTTFSLAFTT
Ga0247827_1027961213300028889SoilSRPDPAPGEPAFPLERRFGRLQLDDQNLYATTFSLRFADAGTTRQFWPLAAAGNAEVI
Ga0299913_1204670823300031229SoilVSPVIIVESMVALLGLQDLARPRPRPGERAFPLERRFGRLQLDDNNLYATSFSLQFADSGTTPLYWPAVPPPADVEVI
Ga0310887_1040426023300031547SoilIVESMIVVLGLQGLTRPEPRAGELEFPFERRFGRLQLDDQNLYATTFSLQFADSGTTQSFWPGPPTGATEVM
Ga0310886_1002735123300031562SoilMIALLGLQDLSRPEPRPGEPAFPFERRFGRLQLDDQNLYATTFTLQFADAGTTRLFWPFVPAADVEVL
Ga0307405_1008503113300031731RhizosphereIVESMIALLGLQDLSRPQPRPGEPAFPFERRFGRLQLDDQNLYATTFTLQFADAGTTRLFWPLVPAGDVEVL
Ga0307468_10098863313300031740Hardwood Forest SoilIVVLGLQGLTRPEPRAGELEFPFERRFGRLQLDDQNLYATTFSLQFADSGTTQLFWPAASTGAAEVM
Ga0307468_10196604413300031740Hardwood Forest SoilSRPEPRPGESSFPFERRFGRLQLDDQNLYTTTFSLRFTDSGATQQFFPSTSS
Ga0310892_1114150123300031858SoilGQYVSPVIIVESMIVVLGLQGLTRPEPRAGELEFPFERRFGRLQLDDQNLYATTFSLQFADSGTTQSFWPAAPTGAAEVM
Ga0310893_1009566813300031892SoilVIIVETMIALLGLQDLARPAARAGEPSFPLERRHGRLQLDDQNLYATSFILGFSDSGTTQQFWPLAPTDVEVM
Ga0310900_1060224823300031908SoilHVSPVVIVETMIALLGLQDLARPAPEAGEPSAPFERRRGRLQLDEQNLYATSFVLQYSDSGTTLQFWPQTEAGAEVM
Ga0307412_1152702423300031911RhizosphereDLSRPAARAGERAFPLERRFGRLQLDDNNLYATTFSLQFADVGTTQLFWPATSMAADEVL
Ga0307416_10204312113300032002RhizosphereLSRPEARAGESAFPLERRFGRLQLDDQNLYATTFSLLYADSGTTRMFCPPAPAADLEVI
Ga0307411_1152248113300032005RhizosphereNRHTCLGQYVSGVVIVESMVALLGLPGLRRPEPRAGESSFPFERRFGHLQLDDQNLYTTAFSLQFDHRDTIQH
Ga0310895_1000736513300032122SoilESIIAVLGLQDLSRPDPAPGEPAFPLERRFGRLQLDDQNLYATTFSLRFADAGTTRQFWPLAAAGNAEVI
Ga0315910_1101072013300032144SoilVSPVVIVETMIALLGLQDLARPAPGAGEPAAPFERRRGRLQLDDPNLYATSFVLEYSDSGTTLQFWPLADAGAEVI
Ga0307471_10320410713300032180Hardwood Forest SoilLQDLKRPAAVPGESSFPFERRFGRLQLDDQNLYATTFTLQYSDSGTTRRFWP
Ga0364929_0079970_18_2363300034149SedimentVSPVIIVESMAALLGLQDLARPEPRAGESSFPFERRFGRLQLDDQNLYATTFSLQFTDSGTTRQFWPTAMRM
Ga0314782_051028_28_2613300034661SoilVSPVIIVESMIVALGLQGLTRPEPRAGELEFPFERRFGRLQLDDQNLYATTFSLQFADSGTTQSFWPAAPTGAAEVM
Ga0373950_0170580_251_4603300034818Rhizosphere SoilVIIVESLIAMLALEGLERPEPGPGELAFPLERRFGRMQLDDNNLYAKTFSLRFSDTGTTRKFYPATTDR

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