Metagenome / Metatranscriptome Family F076778

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F076778
Family Type	Metagenome / Metatranscriptome
Number of Sequences	117
Average Sequence Length	68 residues
Representative Sequence	MIRITDKQLEALLLDRRFNVSDPHEPWESCPDCQIRYALLELSAIRAKARRHLRLVSQDDETADKLNSG
Number of Associated Samples	54
Number of Associated Scaffolds	117

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	77.59 %
% of genes near scaffold ends (potentially truncated)	35.90 %
% of genes from short scaffolds (< 2000 bps)	82.05 %
Associated GOLD sequencing projects	49
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.61

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Bacteria (66.667 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil (34.188 % of family members)
Environment Ontology (ENVO)	Unclassified (46.154 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (67.521 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 52.58% β-sheet: 0.00% Coil/Unstructured: 47.42%
Feature Viewer

Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.61
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.61
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 117 Family Scaffolds
PF09557	DUF2382	24.79
PF17201	Cache_3-Cache_2	11.11
PF00691	OmpA	11.11
PF14023	DUF4239	3.42
PF00196	GerE	1.71
PF04055	Radical_SAM	1.71
PF04226	Transgly_assoc	1.71
PF13581	HATPase_c_2	1.71
PF03168	LEA_2	0.85
PF06123	CreD	0.85
PF06078	DUF937	0.85
PF00111	Fer2	0.85
PF01740	STAS	0.85
PF17202	sCache_3_3	0.85
PF01565	FAD_binding_4	0.85
PF07110	EthD	0.85
PF01061	ABC2_membrane	0.85
PF13668	Ferritin_2	0.85
PF05013	FGase	0.85
PF02321	OEP	0.85
PF01799	Fer2_2	0.85
PF13450	NAD_binding_8	0.85
PF16694	Cytochrome_P460	0.85
PF12833	HTH_18	0.85

COG ID	Name	Functional Category	% Frequency in 117 Family Scaffolds
COG1538	Outer membrane protein TolC	Cell wall/membrane/envelope biogenesis [M]	1.71
COG2261	Uncharacterized membrane protein YeaQ/YmgE, transglycosylase-associated protein family	General function prediction only [R]	1.71
COG3741	N-formylglutamate amidohydrolase	Amino acid transport and metabolism [E]	0.85
COG3753	Uncharacterized conserved protein YidB, DUF937 family	Function unknown [S]	0.85
COG3931	Predicted N-formylglutamate amidohydrolase	Amino acid transport and metabolism [E]	0.85
COG4452	Inner membrane protein CreD involved in colicin E2 resistance	Defense mechanisms [V]	0.85

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	66.67 %
Unclassified	root	N/A	33.33 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	66.67 %
Unclassified	root	N/A	33.33 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	66.67 %
Unclassified	root	N/A	33.33 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	33.33 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	29.06 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	6.84 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	33.33 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	9.40 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	4.27 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	2.56 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1.71 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	33.33 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	7.69 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	4.27 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	2.56 %
unclassified Gammaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria	0.85 %
Caulobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales	0.85 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	33.33 %
Parvibaculaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Parvibaculaceae	7.69 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	4.27 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	2.56 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	0.85 %
Caulobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae	0.85 %
Acetobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	33.33 %
Rhodoligotrophos	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Parvibaculaceae → Rhodoligotrophos	7.69 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	2.56 %
Caulobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Caulobacter	0.85 %
unclassified Acidobacteriaceae	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae	0.85 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	0.85 %
Acetobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	33.33 %
Rhodoligotrophos defluvii	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Parvibaculaceae → Rhodoligotrophos → Rhodoligotrophos defluvii	7.69 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	2.56 %
Acidobacteriaceae bacterium TAA 166	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium TAA 166	0.85 %
Caulobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Caulobacter	0.85 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	0.85 %
Acetobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	0.85 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300004633\|Ga0066395_10020761	All Organisms → cellular organisms → Bacteria	2608	Open in IMG/M
3300005332\|Ga0066388_100975382	Not Available	1415	Open in IMG/M
3300005332\|Ga0066388_102191810	All Organisms → cellular organisms → Bacteria → Proteobacteria	997	Open in IMG/M
3300005332\|Ga0066388_103419927	All Organisms → cellular organisms → Bacteria	811	Open in IMG/M
3300005363\|Ga0008090_14501561	All Organisms → cellular organisms → Bacteria → Proteobacteria	680	Open in IMG/M
3300005363\|Ga0008090_15464026	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Parvibaculaceae → Rhodoligotrophos → Rhodoligotrophos defluvii	964	Open in IMG/M
3300005764\|Ga0066903_101642406	All Organisms → cellular organisms → Bacteria	1221	Open in IMG/M
3300005764\|Ga0066903_101950641	Not Available	1126	Open in IMG/M
3300005764\|Ga0066903_103207117	All Organisms → cellular organisms → Bacteria → Proteobacteria	884	Open in IMG/M
3300005764\|Ga0066903_103378953	Not Available	862	Open in IMG/M
3300005764\|Ga0066903_103403415	All Organisms → cellular organisms → Bacteria → Proteobacteria	858	Open in IMG/M
3300005764\|Ga0066903_103422546	All Organisms → cellular organisms → Bacteria	856	Open in IMG/M
3300009500\|Ga0116229_10021359	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	8098	Open in IMG/M
3300009784\|Ga0123357_10479270	All Organisms → cellular organisms → Bacteria → Proteobacteria	1053	Open in IMG/M
3300009826\|Ga0123355_10012297	All Organisms → cellular organisms → Bacteria	13256	Open in IMG/M
3300009826\|Ga0123355_10288860	All Organisms → cellular organisms → Bacteria	2253	Open in IMG/M
3300009826\|Ga0123355_10311183	All Organisms → cellular organisms → Bacteria	2135	Open in IMG/M
3300009826\|Ga0123355_10530489	All Organisms → cellular organisms → Bacteria	1435	Open in IMG/M
3300009826\|Ga0123355_10669885	Not Available	1203	Open in IMG/M
3300009826\|Ga0123355_10711039	Not Available	1150	Open in IMG/M
3300009826\|Ga0123355_10778680	Not Available	1073	Open in IMG/M
3300009826\|Ga0123355_11136795	Not Available	807	Open in IMG/M
3300009826\|Ga0123355_11153750	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Parvibaculaceae → Rhodoligotrophos → Rhodoligotrophos defluvii	798	Open in IMG/M
3300009826\|Ga0123355_11580284	Not Available	633	Open in IMG/M
3300009826\|Ga0123355_11869222	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	563	Open in IMG/M
3300010043\|Ga0126380_10472820	All Organisms → cellular organisms → Bacteria → Proteobacteria	954	Open in IMG/M
3300010046\|Ga0126384_12198645	Not Available	531	Open in IMG/M
3300010048\|Ga0126373_10010564	All Organisms → cellular organisms → Bacteria → Proteobacteria	7446	Open in IMG/M
3300010048\|Ga0126373_10015272	All Organisms → cellular organisms → Bacteria → Proteobacteria	6353	Open in IMG/M
3300010048\|Ga0126373_10038333	All Organisms → cellular organisms → Bacteria	4192	Open in IMG/M
3300010048\|Ga0126373_10054141	All Organisms → cellular organisms → Bacteria	3575	Open in IMG/M
3300010048\|Ga0126373_10213031	All Organisms → cellular organisms → Bacteria	1879	Open in IMG/M
3300010048\|Ga0126373_10572228	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	1180	Open in IMG/M
3300010048\|Ga0126373_11454155	All Organisms → cellular organisms → Bacteria → Proteobacteria	751	Open in IMG/M
3300010048\|Ga0126373_11619547	Not Available	712	Open in IMG/M
3300010049\|Ga0123356_10391934	All Organisms → cellular organisms → Bacteria	1524	Open in IMG/M
3300010049\|Ga0123356_13201847	Not Available	570	Open in IMG/M
3300010049\|Ga0123356_13301905	Not Available	561	Open in IMG/M
3300010360\|Ga0126372_12951541	Not Available	527	Open in IMG/M
3300010361\|Ga0126378_10406248	All Organisms → cellular organisms → Bacteria	1474	Open in IMG/M
3300010361\|Ga0126378_10802041	All Organisms → cellular organisms → Bacteria	1051	Open in IMG/M
3300010361\|Ga0126378_12440102	All Organisms → cellular organisms → Bacteria → Proteobacteria	597	Open in IMG/M
3300010361\|Ga0126378_13236486	Not Available	518	Open in IMG/M
3300010376\|Ga0126381_100012453	All Organisms → cellular organisms → Bacteria	9667	Open in IMG/M
3300010376\|Ga0126381_100014117	All Organisms → cellular organisms → Bacteria → Proteobacteria	9129	Open in IMG/M
3300010376\|Ga0126381_100096413	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium TAA 166	3764	Open in IMG/M
3300010376\|Ga0126381_100154882	All Organisms → cellular organisms → Bacteria	3014	Open in IMG/M
3300010376\|Ga0126381_100197221	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	2688	Open in IMG/M
3300010376\|Ga0126381_100235158	All Organisms → cellular organisms → Bacteria	2472	Open in IMG/M
3300010376\|Ga0126381_100640138	All Organisms → cellular organisms → Bacteria → Proteobacteria	1516	Open in IMG/M
3300010376\|Ga0126381_100756228	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1393	Open in IMG/M
3300010376\|Ga0126381_101103446	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1146	Open in IMG/M
3300010376\|Ga0126381_101297331	All Organisms → cellular organisms → Bacteria	1052	Open in IMG/M
3300010376\|Ga0126381_101374036	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Parvibaculaceae → Rhodoligotrophos → Rhodoligotrophos defluvii	1021	Open in IMG/M
3300010376\|Ga0126381_101818675	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	879	Open in IMG/M
3300010376\|Ga0126381_102061320	Not Available	822	Open in IMG/M
3300010376\|Ga0126381_102689610	Not Available	711	Open in IMG/M
3300010376\|Ga0126381_102932443	Not Available	679	Open in IMG/M
3300010398\|Ga0126383_10585431	All Organisms → cellular organisms → Bacteria → Proteobacteria	1185	Open in IMG/M
3300012971\|Ga0126369_10214179	All Organisms → cellular organisms → Bacteria	1869	Open in IMG/M
3300016319\|Ga0182033_11797997	Not Available	556	Open in IMG/M
3300016357\|Ga0182032_11703518	Not Available	550	Open in IMG/M
3300016371\|Ga0182034_10316218	All Organisms → cellular organisms → Bacteria	1257	Open in IMG/M
3300016404\|Ga0182037_10629881	All Organisms → cellular organisms → Bacteria	912	Open in IMG/M
3300016404\|Ga0182037_11136116	All Organisms → cellular organisms → Bacteria	684	Open in IMG/M
3300016404\|Ga0182037_12049314	Not Available	514	Open in IMG/M
3300017947\|Ga0187785_10151860	All Organisms → cellular organisms → Bacteria	973	Open in IMG/M
3300017947\|Ga0187785_10233102	All Organisms → cellular organisms → Bacteria	817	Open in IMG/M
3300017959\|Ga0187779_10029896	All Organisms → cellular organisms → Bacteria	3131	Open in IMG/M
3300017970\|Ga0187783_10319616	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1131	Open in IMG/M
3300017975\|Ga0187782_10271562	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	1277	Open in IMG/M
3300017975\|Ga0187782_10353863	Not Available	1112	Open in IMG/M
3300018060\|Ga0187765_10622013	All Organisms → cellular organisms → Bacteria → Proteobacteria	700	Open in IMG/M
3300021377\|Ga0213874_10042801	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Parvibaculaceae → Rhodoligotrophos → Rhodoligotrophos defluvii	1362	Open in IMG/M
3300021560\|Ga0126371_10079602	All Organisms → cellular organisms → Bacteria	3211	Open in IMG/M
3300021560\|Ga0126371_10226679	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Parvibaculaceae → Rhodoligotrophos → Rhodoligotrophos defluvii	1975	Open in IMG/M
3300021560\|Ga0126371_10821498	All Organisms → cellular organisms → Bacteria	1075	Open in IMG/M
3300021560\|Ga0126371_11057082	Not Available	952	Open in IMG/M
3300021560\|Ga0126371_11119653	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	926	Open in IMG/M
3300021560\|Ga0126371_11770234	Not Available	740	Open in IMG/M
3300021560\|Ga0126371_12664715	Not Available	606	Open in IMG/M
3300021560\|Ga0126371_13265067	Not Available	548	Open in IMG/M
3300027860\|Ga0209611_10285245	All Organisms → cellular organisms → Bacteria → Proteobacteria	975	Open in IMG/M
3300027874\|Ga0209465_10021783	All Organisms → cellular organisms → Bacteria → Proteobacteria	2959	Open in IMG/M
3300031543\|Ga0318516_10084052	All Organisms → cellular organisms → Bacteria → Acidobacteria	1781	Open in IMG/M
3300031544\|Ga0318534_10003723	All Organisms → cellular organisms → Bacteria	6901	Open in IMG/M
3300031544\|Ga0318534_10600902	Not Available	625	Open in IMG/M
3300031545\|Ga0318541_10128156	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Parvibaculaceae → Rhodoligotrophos → Rhodoligotrophos defluvii	1382	Open in IMG/M
3300031561\|Ga0318528_10765181	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Caulobacter	516	Open in IMG/M
3300031573\|Ga0310915_10255236	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Parvibaculaceae → Rhodoligotrophos → Rhodoligotrophos defluvii	1234	Open in IMG/M
3300031681\|Ga0318572_10653095	All Organisms → cellular organisms → Bacteria	626	Open in IMG/M
3300031719\|Ga0306917_11145304	All Organisms → cellular organisms → Bacteria → Acidobacteria	605	Open in IMG/M
3300031724\|Ga0318500_10336226	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Parvibaculaceae → Rhodoligotrophos → Rhodoligotrophos defluvii	744	Open in IMG/M
3300031748\|Ga0318492_10811819	All Organisms → cellular organisms → Bacteria	504	Open in IMG/M
3300031751\|Ga0318494_10259964	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Parvibaculaceae → Rhodoligotrophos → Rhodoligotrophos defluvii	997	Open in IMG/M
3300031771\|Ga0318546_10061250	All Organisms → cellular organisms → Bacteria	2376	Open in IMG/M
3300031879\|Ga0306919_11422898	Not Available	523	Open in IMG/M
3300031880\|Ga0318544_10431612	Not Available	513	Open in IMG/M
3300031890\|Ga0306925_10535588	All Organisms → cellular organisms → Bacteria	1243	Open in IMG/M
3300031890\|Ga0306925_11148719	Not Available	782	Open in IMG/M
3300031890\|Ga0306925_11587119	Not Available	637	Open in IMG/M
3300031890\|Ga0306925_12110630	Not Available	527	Open in IMG/M
3300031896\|Ga0318551_10548051	Not Available	665	Open in IMG/M
3300031897\|Ga0318520_11014799	Not Available	524	Open in IMG/M
3300031910\|Ga0306923_11549052	All Organisms → cellular organisms → Bacteria	691	Open in IMG/M
3300031912\|Ga0306921_10298133	All Organisms → cellular organisms → Bacteria → Proteobacteria	1888	Open in IMG/M
3300031912\|Ga0306921_10484926	All Organisms → cellular organisms → Bacteria → Acidobacteria	1438	Open in IMG/M
3300031912\|Ga0306921_12493943	Not Available	537	Open in IMG/M
3300031941\|Ga0310912_11215169	All Organisms → cellular organisms → Bacteria → Proteobacteria	573	Open in IMG/M
3300031945\|Ga0310913_11243355	Not Available	517	Open in IMG/M
3300031946\|Ga0310910_10464650	All Organisms → cellular organisms → Bacteria	1004	Open in IMG/M
3300032001\|Ga0306922_11176005	Not Available	782	Open in IMG/M
3300032001\|Ga0306922_12383884	Not Available	505	Open in IMG/M
3300032008\|Ga0318562_10522444	All Organisms → cellular organisms → Bacteria	687	Open in IMG/M
3300032059\|Ga0318533_10553474	All Organisms → cellular organisms → Bacteria	843	Open in IMG/M
3300033134\|Ga0335073_10608976	Not Available	1218	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	84.62%
Host-Associated	Host-Associated	15.38%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	84.62%
Arthropoda	Host-Associated → Arthropoda	12.82%
Plants	Host-Associated → Plants	2.56%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	84.62%
Digestive System	Host-Associated → Arthropoda → Digestive System	12.82%
Peat Moss	Host-Associated → Plants → Peat Moss	1.71%
Roots	Host-Associated → Plants → Roots	0.85%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	67.52%
Gut	Host-Associated → Arthropoda → Digestive System → Gut	12.82%
Loam	Environmental → Terrestrial → Soil → Loam	10.26%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	6.84%
Unclassified	Host-Associated → Plants → Peat Moss → Unclassified	1.71%
Unclassified	Host-Associated → Plants → Roots → Unclassified	0.85%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	34.19%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	31.62%
Unclassified	Host-Associated → Arthropoda → Digestive System → Gut → Unclassified	12.82%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	10.26%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	6.84%
Tropical Rainforest	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest	1.71%
Unclassified	Host-Associated → Plants → Peat Moss → Unclassified → Unclassified	1.71%
Unclassified	Host-Associated → Plants → Roots → Unclassified → Unclassified	0.85%

Habitat	Taxonomy	Distribution
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	34.19%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	16.24%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	15.38%
Termite Gut	Host-Associated → Arthropoda → Digestive System → Gut → Unclassified → Termite Gut	12.82%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	10.26%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	5.98%
Host-Associated	Host-Associated → Plants → Peat Moss → Unclassified → Unclassified → Host-Associated	1.71%
Tropical Rainforest Soil	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest → Tropical Rainforest Soil	1.71%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.85%
Plant Roots	Host-Associated → Plants → Roots → Unclassified → Unclassified → Plant Roots	0.85%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005363	Tropical rainforest soil microbial communities from the Amazon Forest, Brazil, analyzing deforestation - Metatranscriptome F II A100 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300009500	Host-associated microbial communities from peat moss isolated from Minnesota, USA - S1T2_Fc - Sphagnum magellanicum MG	Host-Associated	Open in IMG/M
3300009784	Embiratermes neotenicus P4 segment gut microbial communities from Petit-Saut dam, French Guiana - Emb289 P4	Host-Associated	Open in IMG/M
3300009826	Embiratermes neotenicus P1 segment gut microbial communities from Petit-Saut dam, French Guiana - Emb289 P1	Host-Associated	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010049	Embiratermes neotenicus P3 segment gut microbial communities from Petit-Saut dam, French Guiana - Emb289 P3	Host-Associated	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300017947	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0815_BV2_4_20_MG	Environmental	Open in IMG/M
3300017959	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_10_MG	Environmental	Open in IMG/M
3300017970	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300017975	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018060	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_10_MG	Environmental	Open in IMG/M
3300021377	Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7	Host-Associated	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300027860	Host-associated microbial communities from peat moss isolated from Minnesota, USA - S1T2_Fc - Sphagnum magellanicum MG (SPAdes)	Host-Associated	Open in IMG/M
3300027874	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio (SPAdes)	Environmental	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031544	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f26	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031561	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f26	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031681	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f20	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031724	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f20	Environmental	Open in IMG/M
3300031748	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f22	Environmental	Open in IMG/M
3300031751	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f24	Environmental	Open in IMG/M
3300031771	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031880	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f25	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031896	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f19	Environmental	Open in IMG/M
3300031897	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f16	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032008	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f18	Environmental	Open in IMG/M
3300032059	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27	Environmental	Open in IMG/M
3300033134	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.2	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0066395_100207612	3300004633	Tropical Forest Soil	MIRITDKQLEALLLDRRFNVSDPHEPWESCSDCQIRYALLELSAIRAKARRHLRLVTQDDGTAESLNSG*
Ga0066388_1002718373	3300005332	Tropical Forest Soil	VRFNVPDPHEVWESCPDCQIRYALLELSALRAKASRRLRLVAADESPADSAATSPGVIP*
Ga0066388_1009753823	3300005332	Tropical Forest Soil	RITDRQLDALLADRRFNVPDPHEPWESCPDCQIRYALLELSALRAKARRHLRLIAGSDSAGPGYPGFGVRTRSS*
Ga0066388_1021918102	3300005332	Tropical Forest Soil	MIRITDKQLEALLLDRRFNVSDPHEPWESCSDCQIRYALLELSAIRAKARRHLRLVSHNDETADQLNSG*
Ga0066388_1034199272	3300005332	Tropical Forest Soil	MIRITDKQLEALLLDRRFNVSDPHEPWESCPDCQIRYALLELSAIRAKARRHLRLVPQNDEATEQLNSG*
Ga0008090_145015612	3300005363	Tropical Rainforest Soil	MIRITDKQLEALLLDRRFNVPDPHEPWESCPDCQIRYALLELSAIRAKARRHLRLVPQNDETADQVNSG*
Ga0008090_154640261	3300005363	Tropical Rainforest Soil	MIRITDKQLEALLLDRRFNVSDPHEPWESCPDCQIRYALLELSAIRAKERRHLRLVSQN
Ga0066903_1016424062	3300005764	Tropical Forest Soil	MIRITDKQLEALLLDRRFNVSDPHEPWESCPDCQIRYALLELSAIRAKARRHLHLVPQNDEAGEKLNSG*
Ga0066903_1019506412	3300005764	Tropical Forest Soil	MIRITDKQLEALLLDRRFNVTDPHEPWESCPDCQIRYALLELSAIRAKARRHLRLVAPNEESATS*
Ga0066903_1032071174	3300005764	Tropical Forest Soil	LLLDRRFNVSDPHEPWESCPDCQIRYALLELSAIRAKARRHLRLVPQNDEATEQLNSG*
Ga0066903_1033789532	3300005764	Tropical Forest Soil	MIRITDKQLEALLADRRFNVPDPHEPWESCPDCQIRYALLELSALRAKASRHLRLVETPQTA*
Ga0066903_1034034151	3300005764	Tropical Forest Soil	LRSKTSGSLGMIRITDKQLEALLLDRRFNVSDPHEPWESCSDCQIRYALLELSAIRAKARRHLRLVTQDDGTAENLNSG*
Ga0066903_1034225462	3300005764	Tropical Forest Soil	MIRITDKQLEALLLDRRFNVSDPHEPWESCPDCQIRYALLELSAIRAKARRHLRLVSQDDETADKLNSG*
Ga0116229_100213592	3300009500	Host-Associated	MIRISDKQLAALLSDRRFDVPDPHEPWESCPDCHIRYALLELREYRAKARRHLRVVRASEDLVD*
Ga0123357_104792701	3300009784	Termite Gut	MIRITDKQLEALLVDPRFDVPDPHEVWQSCPDCQIRYALLELRALRDKARRHLRLVTPNELAADAGTTG*
Ga0123355_100122978	3300009826	Termite Gut	MIRITDKQLEALLLDRRFNAPDPHEPWESCPDCQIRYALLELSAIRAKARRHLRLVAQNDETADKLNSG*
Ga0123355_102888604	3300009826	Termite Gut	MIRITDKQLEALLADPRFDVPDPHEVWQSCSDCQIRYALLELRALRDKARRHLRLVTPNELAADAGTTG
Ga0123355_103111832	3300009826	Termite Gut	MICITDKQLEALLADPRFDIPDPHEVWQSCPDCQIRYALLELRALRAKARRHLRLVTPNELAADGGTTG*
Ga0123355_105304892	3300009826	Termite Gut	MIRITDKQLEALLADRRFNVPDPHEPWESCQDCQIRYALLELSALRAKARRHLKLATREGERIVEDDAV*
Ga0123355_106698853	3300009826	Termite Gut	MIRITDKQLEALLADRRFNVPDPHEPWESCPDCQIRYALLELSAIRAKARRHLRLVTQNEGPVDSVNSV*
Ga0123355_107110392	3300009826	Termite Gut	MIRITDKQLEALLADPRFDVPDPHEVWQSCSDCQIRYALLELSALRAKARRHLRLLTPDELAADASTTG*
Ga0123355_107786801	3300009826	Termite Gut	MIRITDKQLEALLADRRFNVPDPHEPWESCQDCQIRYALLELSAYRAKARRHLRLVDVSEEPADQVNSDSD*
Ga0123355_111367951	3300009826	Termite Gut	MIRITDKQLEALLLDRRFNAPDPHEPWESCPDCQVRYALLELSAIRAKARRHLRLVAQNDEAADKLNSG*
Ga0123355_111537501	3300009826	Termite Gut	MIRITDKQLEALLADPRFDVPDPHEVWQSCPDCQIRYALLELRAMRAKALRHLRVVTPNELAADAGTTG*
Ga0123355_115802841	3300009826	Termite Gut	MIRITDKQLEALLLDRRFNVPDPHEPWESCPDCQIRYALLELSAIRAKARRHLRLVPAKNDETADKLNSG
Ga0123355_118692222	3300009826	Termite Gut	MICITDKQLEALLADPRFDIPDPHEVWQSYPDCQIRYALLELRALRAKARRHLRLVTPNELTADAGTTG*
Ga0126380_104728201	3300010043	Tropical Forest Soil	ALLLDRRFNVSDPHEPWESCPDCQIRYALLELSAIRAKARRHLRLVPQNDEAPEQLNSG*
Ga0126384_121986452	3300010046	Tropical Forest Soil	MIRISDKQLEALLADRRFDVPDPHEPWESCPDCQIRYALLELNALRAKARRHLRMVVQNEPALADRLVSG*
Ga0126373_100105646	3300010048	Tropical Forest Soil	MIRITDQQLEALLLDRRFNVPDPHEPWQSCPDCQIRYALLELSAIRAKARRHLRLVSPNDEPADKANSA*
Ga0126373_100152724	3300010048	Tropical Forest Soil	MIRITDKQLEALLADRRFNVPDPHEVWESCPDCQIRYALLELSALRAKASRHLRLVSTDETSADDVSSANSA*
Ga0126373_100383333	3300010048	Tropical Forest Soil	MIRITDKQLEVLLADRRFDVPDPHEPWESCPDCQIRYALLELNALRAKARRHLRMVVQNEPALADSLVSG*
Ga0126373_100541414	3300010048	Tropical Forest Soil	MIRITDKQLEALLLDRRFNVPDPHEPWESCPDCQIRYALLELSAIRAKARRHLRLVPQNDETPDQVNSG*
Ga0126373_102130313	3300010048	Tropical Forest Soil	MIRITDRQLDALLTDRRFNVPDPHEPWEFCPDCQIRYALLELNALRAKARRHLRLLAGSDSAVADTLASG*
Ga0126373_105722283	3300010048	Tropical Forest Soil	MIRITDKQLEALLADRRFNVPDPHEVWESCPDCQIRYALLELSVLRAKASRHLRLVSTDETSADDVSSANNA*
Ga0126373_114541551	3300010048	Tropical Forest Soil	MIRITDQQLEALLLDRRFNVPDPHEPWQSCPDCQIRYALLELSAIRAKARRHLRVVPQSDETAEKLNSA*
Ga0126373_116195472	3300010048	Tropical Forest Soil	MIRITDKQLEALLLDRRFNVSDPHEPWESCPDCQIRYALLELSAIRAKARRHLRLVPQNDETADQLNSG*
Ga0123356_103919342	3300010049	Termite Gut	MIRITDKQLEALLLDRRFNVPDPHEPWESCPDCQIRYALLELSAIRAKARRHLRLVPKDDETADKLNSG*
Ga0123356_132018471	3300010049	Termite Gut	MIRITDKQLEALLADPRFDVPDPHEVWQSCSDCQIRYALLELRALRDKARRHLRLVTPNELAADAGTTG*
Ga0123356_133019051	3300010049	Termite Gut	MIRITDKQLEALLVDPRFDVPDPHEVWQSCPDCQIRYALLELRALRDKARRHLRLVTPNELAADAGTTG
Ga0126372_129515412	3300010360	Tropical Forest Soil	MIRITDKQLEALLLDRRFNVTDPHEPWESCPDCQIRYALLELSAIRAKARRHLHLVPQADQSADKLNSG*
Ga0126378_104062482	3300010361	Tropical Forest Soil	MIRITDKQLEALLLDRRFNVSDPHEPWESCPDCQIRYALLELSAIRAKARRHLRLVPQSDDAADKLNSG*
Ga0126378_108020411	3300010361	Tropical Forest Soil	MNFRITDKQLEALLADRRFSAPDPHEPWESCPDCQIRYALLELRGLREKANRHLRIVVNRD*
Ga0126378_124401022	3300010361	Tropical Forest Soil	EALLLDRRFNVPDPHEPWQSCPDCQIRYALLELSAIRAKARRHLRVVPQNEETADKLNSA
Ga0126378_132364862	3300010361	Tropical Forest Soil	LADRRFDVPDPHEPWESCPDCQIRYALLELNALRAKARRHLRIEAHNDRTVADSLVSG*
Ga0126381_1000124535	3300010376	Tropical Forest Soil	MIRITDKQLEVLLADRRCDVPDPHEPWESCPDCQIRYALLELNALRAKARRHLRIEAHNDRTVADSLVSG*
Ga0126381_1000141175	3300010376	Tropical Forest Soil	MIRITDKQLEALLLDRRFNVSDPHEPWESCSDCQIRYALLELSAIRAKARRHLRLVTQDDETVEKLNSG*
Ga0126381_1000964134	3300010376	Tropical Forest Soil	MIRITDKQLEALLLDRRFNVSDPHEPWESCSDCQIRYALLELSAIRAKARRHLRLVTHNDETADKLNSG*
Ga0126381_1001548823	3300010376	Tropical Forest Soil	MMRITDKQLEALLAERRFNVPDPHEPWESCPDCQIRYALLELNALRVKARRKLRVVAQNDRVAADTVASG*
Ga0126381_1001972213	3300010376	Tropical Forest Soil	MIRITDQQLEALLADRRFSAPDPHEPWESCPDCQIRYALLELSALRAKAKRHLRVVAG
Ga0126381_1002351582	3300010376	Tropical Forest Soil	MIRITDKQLEALLADRRFSAPDPHEPWESCPDCQIRYALLELQALRAKANRHLRIVCDNEKTADGLQSG*
Ga0126381_1006401383	3300010376	Tropical Forest Soil	MIRITDRQLDALLADRRFNVPDPHEPWESCPDCQIRYALLELNALRAKARRHLRLLAGSDSAVADTLASG*
Ga0126381_1007562281	3300010376	Tropical Forest Soil	MIRITDQQLEALLADRRFSAPDPHEPWESCPDCQIRYALLELSALRAKAKRHLRVVAGTESSAESA*
Ga0126381_1011034462	3300010376	Tropical Forest Soil	MIRITDKQLEALLADRRFSAPDPHEPWESCPDCQIRYALLELSAIRAKARRHLKLVTSRDEPADDLSCS*
Ga0126381_1012973311	3300010376	Tropical Forest Soil	GMIRITDKQLEALLLDRRFNVSDPHEPWESCPDCQIRYALLELSAIRAKARRHLRLVSQDDETADKLNSG*
Ga0126381_1013740362	3300010376	Tropical Forest Soil	MIRITDQQLEALLLDRRFNVPDPHEPWQSCQDCQIRYALLELSAIRAKARRHLRVVPQSDETAEKLNSA*
Ga0126381_1018186752	3300010376	Tropical Forest Soil	MIRITDKQLEALLADRRFNAPDPHEPWESCPDCQIRYALLELSALRAKANRHLRLVAGSEISADSVSSVNSL*
Ga0126381_1020613201	3300010376	Tropical Forest Soil	MIRLTDKQLEALLADRRFNVTDPHEVWESCPDCQIRYALLELSALRAKAKRHLRLVVADDTSADGVNADYAELRSDRS*
Ga0126381_1026896102	3300010376	Tropical Forest Soil	MIRITDRQLDALLTDRRFNVPDPHEPWEFCPDCQIRYALLELNALRAKARRHLRLVVQSESAVEDTLASG*
Ga0126381_1029324431	3300010376	Tropical Forest Soil	MIRITDKQLEALLADRRFNVTDPHEVWESCPDCQIRYALLELSALRAKANRHLRLVSTNETSADDVNSANSA*
Ga0126383_105854311	3300010398	Tropical Forest Soil	ITDKQLEALLLDRRFNVSDPHEPWESCSDCQIRYALLELSAIRAKARRHLRLVTQDDGTAENLNSG*
Ga0126369_102141792	3300012971	Tropical Forest Soil	MIRITDKQLEALLLDRRFNVSDPHEPWESCSDCQIRYALLELSAIRAKARRHLRLVTQDDGTAENLNSG*
Ga0182033_117979971	3300016319	Soil	MIRITDRQLDALLTDRRFNVPDRHEPWEFCPDCQIRYALLELNALRAKARRHLRLVVQSESAVEDTLASG
Ga0182032_117035182	3300016357	Soil	MIRITDQQLEALLLDRRFNVPDPHEPWQSCPDCQIRYALLELSAIRAKARRPLRLVTPNEETATG
Ga0182034_103162181	3300016371	Soil	TSGSLGMIRITDKQLEALLLDRRFNVSDPHEPWESCPDCQIRYALLELSAIRAKARRHLRLVSHQNDETADKLNSG
Ga0182037_106298812	3300016404	Soil	MIRITDKQLEALLADRRFNVPDPHEPWESCPDCQIRYALLELSAQRAKARRHLRIVGQNEEPAESLNSG
Ga0182037_111361162	3300016404	Soil	MIRITDKQLEALLADRRFNVTDPHEVWESCPDCQIRYALLELSALRAKAKRHLRLVATD
Ga0182037_120493142	3300016404	Soil	MIRITDRQLDALLADRRFNVPDPHEPWESCPDCQIRYALLELNALRAKARRHLRLVVQSESAVEDTLASG
Ga0187785_101518602	3300017947	Tropical Peatland	MIRITDKQLEALLADKRFNVPDPHEPWESCPDCQIRYALLELSAQRAKARRHLRIVGQNDEPVESLNSG
Ga0187785_102331021	3300017947	Tropical Peatland	MIRITDKQLEALLLDRRFNVSDPHEPWESCSDCQIRYALLELSAIRAKARRHLRLVTQDDGTSEQLNSG
Ga0187779_100298965	3300017959	Tropical Peatland	MIRITDKQLEALLLDRRFNVSDPHEPWESCSDCQIRYALLELSAIRAKARRHLRLVTQDDDTTEKLISG
Ga0187783_103196161	3300017970	Tropical Peatland	MIRITDKQLEALLADRRFNVPDPHEPWESCPDCQIRYALLELSAIRAKARRHLRLVSQDDEPADSVSSV
Ga0187782_102715622	3300017975	Tropical Peatland	MQKTGALGMIRITDKQLEALLADRRFSAPDPHEPWESCSDCQVRYALLELSAIRAKARRHLHLVTRNEEAMDSA
Ga0187782_103538632	3300017975	Tropical Peatland	MIRITDKQLGALLADRRFNVPDPHEPWESCPDCQIRYALLELSAMRAKARRHLRLVSQQDEKESDSLSFGKGLA
Ga0187765_106220132	3300018060	Tropical Peatland	MIRITDKQLEALLLDRRFNVSDPHEPWESCSDCQIRYALLELSAIRAKARRHLRLVTQEDDAAEKLISG
Ga0213874_100428012	3300021377	Plant Roots	MIRITDKQLEALLLDRRFNVSDPHEPWESCSDCQIRYALLELSAIRAKARRHLRLVHQDDETADKLNSG
Ga0126371_100796024	3300021560	Tropical Forest Soil	MIRITDKQLEALLLDRRFNVSDPHEPWESCSDCQIRYALLELSAIRAKARRHLRLVTQDDGTAENLNSG
Ga0126371_102266792	3300021560	Tropical Forest Soil	MIRITDKQLEALLLDRRFNVSDPHEPWESCPDCQIRYALLELSAIRAKARRHLRLVSQDDETADKLNSG
Ga0126371_108214981	3300021560	Tropical Forest Soil	MIRITDKQLEALLADRRFSAPDPHEPWESCPDCQIRYALLELQALRAKANRHLRIVCDNEKTADGLQSG
Ga0126371_110570821	3300021560	Tropical Forest Soil	MIRITDKQLEALLADRRFNVPDPHEVWESCPDCQIRYALLELSALRAKASRHLRLVSTDETSADDV
Ga0126371_111196532	3300021560	Tropical Forest Soil	MIRITDKQLEVLLADRRFDVPDPHEPWESCPDCQIRYALLELNALRAKARRHLRIVAHNDRTVADSLVSG
Ga0126371_117702341	3300021560	Tropical Forest Soil	MIRITDRQLDALLADRRFNVPDPHESWESCPDCQIRYALLELNALRAKARRHLRLLAGSDSAVADTLASG
Ga0126371_126647152	3300021560	Tropical Forest Soil	MIRLTDKQLEALLADRRFNVTDPHEVWESCPDCQIRYALLELSALRAKAKRHLRLVATDDTSADGVNAEYAELRSDRS
Ga0126371_132650671	3300021560	Tropical Forest Soil	MIRITDKQLETLLADRRFNVTDPHEVWESCPDCQIRYALLELSALRAKAKRHLRLVATDESSAESASREYPELQSERS
Ga0209611_102852452	3300027860	Host-Associated	MIRISDKQLAALLSDRRFDVPDPHEPWESCPDCHIRYALLELREYRAKARRHLRVVRASEDLVD
Ga0209465_100217831	3300027874	Tropical Forest Soil	MIRITDKQLEALLLDRRFNVSDPHEPWESCSDCQIRYALLELSAIRAKARRHLRLVTQDDGTAESLNSG
Ga0318516_100840523	3300031543	Soil	MIRITDKQLEALLLDRRFNVSDPHEPWESCPDCQIRYALLELSAIRAKARRHLRLVSQQN
Ga0318534_100037232	3300031544	Soil	MIRITDKQLEALLLDRRFNVSDPHEPWESCPDCQIRYALLELSAIRAKARRHLRLVSHQNDETADKLNSG
Ga0318534_106009022	3300031544	Soil	MIRITDRQLDALLTDRRFNVPDPHEPWEFCPDCQIRYALLELNALRAKARRHLRLVVQSESAVEDTLASG
Ga0318541_101281563	3300031545	Soil	MIRITDKQLEALLLDRRFNVSDPHEPWESCSDCQIRYALLELSAIRAKARRHLRLVSH
Ga0318528_107651812	3300031561	Soil	PKTWGRDRMIRITDKQLEALLADRRFNVPDPHEPWESCPDCQIRYALLELSAQRAKARRHLRLVGQNEEPVDSLNSG
Ga0310915_102552361	3300031573	Soil	MIRITDKQLEALLLDRRFNVSDPHEPWESCPDCQIRYALLELSAIRAKARRHLRLVSHQNDE
Ga0318572_106530952	3300031681	Soil	RITDKQLEALLLDRRFNVSDPHEPWESCSDCQIRYALLELSAIRAKARRHLRLVSHNDETADQLNSG
Ga0306917_111453042	3300031719	Soil	MIRITDKQLEALLADRRFNVTDPHEVWESCPDCQIRYALLELSALRAKAKRHLRLVATDGASADSVN
Ga0318500_103362261	3300031724	Soil	MIRITDKQLEALLLDRRFNVSDPHEPWESCSDCQIRYALLELSAIRAKARRHLRLVSHNDETADQLN
Ga0318492_108118192	3300031748	Soil	LLLDRRFNVSDPHEPWESCPDCQIRYALLELSAIRAKARRHLRLVSHQNDETADKLNSG
Ga0318494_102599642	3300031751	Soil	MIRITDKQLEALLLDRRFNVSDPHEPWESCSDCQIRYALLELSAIRAKARRHLRLVSHND
Ga0318546_100612504	3300031771	Soil	SQTSGSLGMIRITDKQLEALLLDRRFNVSDPHEPWESCSDCQIRYALLELSAIRAKARRHLRLVSHNDETADQLNSG
Ga0306919_114228981	3300031879	Soil	MIRITDKQLEALLADRRFNVTDPHEVWESCPDCQIRYALLELSALRAKAKRHLRLVATDGASADSVNAEYAELRS
Ga0318544_104316121	3300031880	Soil	MIRITDKQLEALLLDRRFNVSDPHEPWESCSDCQIRYALLELSAIRAKARRHLRLVSHNDETADQLNSG
Ga0306925_105355882	3300031890	Soil	MIRITDKQLEALLLDRRFNVTDPHEPWESCPDCQIRYALLELSAIRAKARRHLRLVSHQNDETADKLNSG
Ga0306925_111487191	3300031890	Soil	MIRITDRQLDALLTDRRFNVPDPHEPWEFCPDCQIRYALLELNALSAKARRHLRLVVQSESAVEDTLASG
Ga0306925_115871191	3300031890	Soil	MIRITDKQLEALLADRRFNVPDPHEPWESCPDCQIRYALLELSAQRAKARRHLRLVGQNEEPVDSLNSG
Ga0306925_121106301	3300031890	Soil	MIRITDKQLEALLADRRFNVTDPHEVWESCPDCQIRYALLELSALRAKAKRHLRLVATDGASADSVNAEYAELRSDGS
Ga0318551_105480511	3300031896	Soil	LLDRRFHVSDAHEPWESCSDCQIRYALLELSAIRAKARRHLRLVSHNDETADQLNSG
Ga0318520_110147992	3300031897	Soil	MIRITDKQLEALLLDRRFNVTDPHEPWESCPDCQIRYALLELSAIRAKARRHLRLVSHQN
Ga0306923_115490523	3300031910	Soil	TDKQLEALLLDRRFNVTDPHEPWESCPDCQIRYALLELSAIRAKARRHLRLVSHQNDETADKLNSG
Ga0306921_102981332	3300031912	Soil	MIRITDRQLDTLLAERRFNVPDPHEPFESCPDCQVRYALLELSALRAKARRHLRLVAGSDSAGPGYPGFGVGTRRS
Ga0306921_104849263	3300031912	Soil	MIRITDKQLEALLLDRRFNVTDPHEPWESCPDCQIRYALLELSAIRAKARRHLRL
Ga0306921_124939432	3300031912	Soil	MRRISDKQLETLLADRRFSAPDPHEPWESCPDCQMRYALLELKALRAKANRHLTVVREVDGAVDSR
Ga0310912_112151692	3300031941	Soil	QQLEALLLDRRFNVPDPHEPWQSCPDCQIRYALLELSAIRAKARRPLRLVTPNEETATG
Ga0310913_112433551	3300031945	Soil	ISDKQLETLLADRRFSAPDPHEPWESCPDCQMRYALLELKALRAKANRHLTVVREVDGAVDSR
Ga0310910_104646501	3300031946	Soil	GPLRSKTSGSLGMIRITDKQLEALLLDRRFNVTDPHEPWESCPDCQIRYALLELSAIRAKARRHLRLVSHQNDETADKLNSG
Ga0306922_111760051	3300032001	Soil	ITDRQLDALLTDRRFNVPDPHEPWEFCPDCQIRYALLELNALRAKARRHLRLVVQSESAVEDTLASG
Ga0306922_123838841	3300032001	Soil	KQLEALLLDRRFNVTDPHEPWESCPDCQIRYALLELSAIRAKARRHLRLVSHQNDETADKLNSG
Ga0318562_105224442	3300032008	Soil	SKTSGSLGMIRITDKQLEALLLDRRFNVSDPHEPWESCPDCQIRYALLELSAIRAKARRHLRLVSHQNDETADKLNSG
Ga0318533_105534741	3300032059	Soil	ALLLDRRFNVTDPHEPWESCPDCQIRYALLELSAIRAKARRHLRLVSHQNDETADKLNSG
Ga0335073_106089762	3300033134	Soil	MIRITDKQLEALLADRRFDVPDPHEPWESCPDCQIRYALLELRAYRAKAQRHLRIVTDTEEPAGSP

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F076778

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences