Metagenome Family F076473

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F076473
Family Type	Metagenome
Number of Sequences	118
Average Sequence Length	89 residues
Representative Sequence	VVAPARRAVAVLLALLVWPAVRSSAQTVTVDTVGEALKIRAPGFSFLKGDPLARLKDGRSVRVELAAMVLPAPGKSPAATT
Number of Associated Samples	94
Number of Associated Scaffolds	118

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	85.22 %
% of genes near scaffold ends (potentially truncated)	95.76 %
% of genes from short scaffolds (< 2000 bps)	91.53 %
Associated GOLD sequencing projects	89
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.29

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (86.441 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil (22.881 % of family members)
Environment Ontology (ENVO)	Unclassified (27.966 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (33.051 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 20.18% β-sheet: 14.68% Coil/Unstructured: 65.14%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.29
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.29
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 118 Family Scaffolds
PF01103	Omp85	89.83
PF02738	MoCoBD_1	0.85
PF12704	MacB_PCD	0.85

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	86.44 %
Unclassified	root	N/A	13.56 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	86.44 %
Unclassified	root	N/A	13.56 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	86.44 %
Unclassified	root	N/A	13.56 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	82.20 %
Unclassified	root	N/A	13.56 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.85 %

Name	Rank	Taxonomy	Distribution
Vicinamibacteria	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria	74.58 %
Unclassified	root	N/A	13.56 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	5.08 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	0.85 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.85 %

Name	Rank	Taxonomy	Distribution
Vicinamibacterales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales	74.58 %
Unclassified	root	N/A	13.56 %
Bryobacterales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales	5.08 %
Acidobacteria bacterium RIFCSPLOWO2_12_FULL_66_21	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_12_FULL_66_21	0.85 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.85 %

Name	Rank	Taxonomy	Distribution
Vicinamibacteraceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae	74.58 %
Unclassified	root	N/A	13.56 %
Solibacteraceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae	3.39 %
Acidobacteria bacterium RIFCSPLOWO2_12_FULL_66_21	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_12_FULL_66_21	0.85 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.85 %

Name	Rank	Taxonomy	Distribution
Luteitalea	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea	74.58 %
Unclassified	root	N/A	13.56 %
Candidatus Solibacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter	3.39 %
Acidobacteria bacterium RIFCSPLOWO2_12_FULL_66_21	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_12_FULL_66_21	0.85 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.85 %

Name	Rank	Taxonomy	Distribution
unclassified Luteitalea	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → unclassified Luteitalea	74.58 %
Unclassified	root	N/A	13.56 %
Candidatus Solibacter usitatus	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	3.39 %
Acidobacteria bacterium RIFCSPLOWO2_12_FULL_66_21	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_12_FULL_66_21	0.85 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.85 %

Name	Rank	Taxonomy	Distribution
Luteitalea sp.	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → unclassified Luteitalea → Luteitalea sp.	74.58 %
Unclassified	root	N/A	13.56 %
Candidatus Solibacter usitatus	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	3.39 %
Acidobacteria bacterium RIFCSPLOWO2_12_FULL_66_21	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_12_FULL_66_21	0.85 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.85 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000363\|ICChiseqgaiiFebDRAFT_10369160	Not Available	518	Open in IMG/M
3300000364\|INPhiseqgaiiFebDRAFT_104772335	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → unclassified Luteitalea → Luteitalea sp.	628	Open in IMG/M
3300000891\|JGI10214J12806_10885705	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	1316	Open in IMG/M
3300000956\|JGI10216J12902_109973015	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → unclassified Luteitalea → Luteitalea sp.	1002	Open in IMG/M
3300000956\|JGI10216J12902_119303872	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → unclassified Luteitalea → Luteitalea sp.	567	Open in IMG/M
3300001139\|JGI10220J13317_11216084	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	810	Open in IMG/M
3300001431\|F14TB_100924764	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → unclassified Luteitalea → Luteitalea sp.	587	Open in IMG/M
3300001431\|F14TB_102125626	Not Available	550	Open in IMG/M
3300001686\|C688J18823_11010368	Not Available	527	Open in IMG/M
3300002128\|JGI24036J26619_10092843	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	611	Open in IMG/M
3300003319\|soilL2_10122451	All Organisms → cellular organisms → Bacteria	1770	Open in IMG/M
3300003319\|soilL2_10167373	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → unclassified Luteitalea → Luteitalea sp.	1289	Open in IMG/M
3300003324\|soilH2_10039858	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → unclassified Luteitalea → Luteitalea sp.	2850	Open in IMG/M
3300004114\|Ga0062593_100002222	All Organisms → cellular organisms → Bacteria	6971	Open in IMG/M
3300004114\|Ga0062593_100129029	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → unclassified Luteitalea → Luteitalea sp.	1864	Open in IMG/M
3300004156\|Ga0062589_100846013	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → unclassified Luteitalea → Luteitalea sp.	835	Open in IMG/M
3300004157\|Ga0062590_100561236	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → unclassified Luteitalea → Luteitalea sp.	992	Open in IMG/M
3300004157\|Ga0062590_101986039	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → unclassified Luteitalea → Luteitalea sp.	603	Open in IMG/M
3300004157\|Ga0062590_102022232	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → unclassified Luteitalea → Luteitalea sp.	598	Open in IMG/M
3300004463\|Ga0063356_104557418	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → unclassified Luteitalea → Luteitalea sp.	596	Open in IMG/M
3300005093\|Ga0062594_100542801	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → unclassified Luteitalea → Luteitalea sp.	999	Open in IMG/M
3300005213\|Ga0068998_10186231	Not Available	512	Open in IMG/M
3300005332\|Ga0066388_107053695	Not Available	565	Open in IMG/M
3300005340\|Ga0070689_101587268	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → unclassified Luteitalea → Luteitalea sp.	594	Open in IMG/M
3300005353\|Ga0070669_102012734	Not Available	505	Open in IMG/M
3300005354\|Ga0070675_100613562	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → unclassified Luteitalea → Luteitalea sp.	987	Open in IMG/M
3300005441\|Ga0070700_101662078	Not Available	547	Open in IMG/M
3300005455\|Ga0070663_100544532	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → unclassified Luteitalea → Luteitalea sp.	969	Open in IMG/M
3300005507\|Ga0074259_10059801	Not Available	505	Open in IMG/M
3300005544\|Ga0070686_101124320	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → unclassified Luteitalea → Luteitalea sp.	650	Open in IMG/M
3300005544\|Ga0070686_101132749	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → unclassified Luteitalea → Luteitalea sp.	647	Open in IMG/M
3300005544\|Ga0070686_101484128	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → unclassified Luteitalea → Luteitalea sp.	571	Open in IMG/M
3300005764\|Ga0066903_106346643	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → unclassified Luteitalea → Luteitalea sp.	617	Open in IMG/M
3300005840\|Ga0068870_10358027	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → unclassified Luteitalea → Luteitalea sp.	938	Open in IMG/M
3300005840\|Ga0068870_10988812	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → unclassified Luteitalea → Luteitalea sp.	599	Open in IMG/M
3300006844\|Ga0075428_102248595	All Organisms → cellular organisms → Bacteria	562	Open in IMG/M
3300006847\|Ga0075431_101167540	All Organisms → cellular organisms → Bacteria	733	Open in IMG/M
3300006881\|Ga0068865_101617642	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → unclassified Luteitalea → Luteitalea sp.	583	Open in IMG/M
3300006894\|Ga0079215_10371930	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → unclassified Luteitalea → Luteitalea sp.	829	Open in IMG/M
3300006969\|Ga0075419_10037873	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → unclassified Luteitalea → Luteitalea sp.	3010	Open in IMG/M
3300007004\|Ga0079218_13724472	Not Available	518	Open in IMG/M
3300009147\|Ga0114129_10837389	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → unclassified Luteitalea → Luteitalea sp.	1171	Open in IMG/M
3300009156\|Ga0111538_10477049	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → unclassified Luteitalea → Luteitalea sp.	1581	Open in IMG/M
3300009156\|Ga0111538_12310399	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → unclassified Luteitalea → Luteitalea sp.	675	Open in IMG/M
3300009553\|Ga0105249_10734473	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → unclassified Luteitalea → Luteitalea sp.	1049	Open in IMG/M
3300009609\|Ga0105347_1471101	Not Available	544	Open in IMG/M
3300010044\|Ga0126310_11206371	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → unclassified Luteitalea → Luteitalea sp.	607	Open in IMG/M
3300010045\|Ga0126311_11083641	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → unclassified Luteitalea → Luteitalea sp.	658	Open in IMG/M
3300011427\|Ga0137448_1183168	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → unclassified Luteitalea → Luteitalea sp.	581	Open in IMG/M
3300012469\|Ga0150984_105612718	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → unclassified Luteitalea → Luteitalea sp.	740	Open in IMG/M
3300012469\|Ga0150984_114277553	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → unclassified Luteitalea → Luteitalea sp.	648	Open in IMG/M
3300012910\|Ga0157308_10038255	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → unclassified Luteitalea → Luteitalea sp.	1187	Open in IMG/M
3300012957\|Ga0164303_10565048	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → unclassified Luteitalea → Luteitalea sp.	742	Open in IMG/M
3300012958\|Ga0164299_10467699	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → unclassified Luteitalea → Luteitalea sp.	830	Open in IMG/M
3300012984\|Ga0164309_11695614	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → unclassified Luteitalea → Luteitalea sp.	542	Open in IMG/M
3300012988\|Ga0164306_11395510	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → unclassified Luteitalea → Luteitalea sp.	596	Open in IMG/M
3300014259\|Ga0075311_1062221	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → unclassified Luteitalea → Luteitalea sp.	745	Open in IMG/M
3300014745\|Ga0157377_10098493	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → unclassified Luteitalea → Luteitalea sp.	1738	Open in IMG/M
3300015077\|Ga0173483_10144766	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → unclassified Luteitalea → Luteitalea sp.	1042	Open in IMG/M
3300015077\|Ga0173483_10950076	Not Available	511	Open in IMG/M
3300015258\|Ga0180093_1086826	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales	753	Open in IMG/M
3300015372\|Ga0132256_100123757	All Organisms → cellular organisms → Bacteria → Acidobacteria	2556	Open in IMG/M
3300015373\|Ga0132257_100647056	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → unclassified Luteitalea → Luteitalea sp.	1310	Open in IMG/M
3300018073\|Ga0184624_10377846	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → unclassified Luteitalea → Luteitalea sp.	632	Open in IMG/M
3300018469\|Ga0190270_11536148	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → unclassified Luteitalea → Luteitalea sp.	716	Open in IMG/M
3300018476\|Ga0190274_12785425	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → unclassified Luteitalea → Luteitalea sp.	585	Open in IMG/M
3300019356\|Ga0173481_10077366	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → unclassified Luteitalea → Luteitalea sp.	1221	Open in IMG/M
3300022880\|Ga0247792_1018769	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → unclassified Luteitalea → Luteitalea sp.	1137	Open in IMG/M
3300022908\|Ga0247779_1116025	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → unclassified Luteitalea → Luteitalea sp.	700	Open in IMG/M
3300025271\|Ga0207666_1010457	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → unclassified Luteitalea → Luteitalea sp.	1270	Open in IMG/M
3300025901\|Ga0207688_10787641	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → unclassified Luteitalea → Luteitalea sp.	602	Open in IMG/M
3300025904\|Ga0207647_10549730	All Organisms → cellular organisms → Bacteria → Proteobacteria	640	Open in IMG/M
3300025926\|Ga0207659_10041145	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_12_FULL_66_21	3236	Open in IMG/M
3300025926\|Ga0207659_10464518	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → unclassified Luteitalea → Luteitalea sp.	1067	Open in IMG/M
3300025926\|Ga0207659_10728789	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → unclassified Luteitalea → Luteitalea sp.	850	Open in IMG/M
3300025930\|Ga0207701_10113096	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → unclassified Luteitalea → Luteitalea sp.	2425	Open in IMG/M
3300026075\|Ga0207708_11867268	Not Available	527	Open in IMG/M
3300027876\|Ga0209974_10033221	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → unclassified Luteitalea → Luteitalea sp.	1712	Open in IMG/M
3300027880\|Ga0209481_10292267	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → unclassified Luteitalea → Luteitalea sp.	826	Open in IMG/M
3300028590\|Ga0247823_10563121	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → unclassified Luteitalea → Luteitalea sp.	859	Open in IMG/M
3300028809\|Ga0247824_10430149	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → unclassified Luteitalea → Luteitalea sp.	767	Open in IMG/M
3300031170\|Ga0307498_10327896	Not Available	581	Open in IMG/M
3300031538\|Ga0310888_10161602	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales	1203	Open in IMG/M
3300031538\|Ga0310888_10332637	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → unclassified Luteitalea → Luteitalea sp.	876	Open in IMG/M
3300031538\|Ga0310888_10657066	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → unclassified Luteitalea → Luteitalea sp.	640	Open in IMG/M
3300031547\|Ga0310887_10626298	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → unclassified Luteitalea → Luteitalea sp.	662	Open in IMG/M
3300031547\|Ga0310887_10646998	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → unclassified Luteitalea → Luteitalea sp.	652	Open in IMG/M
3300031548\|Ga0307408_100342758	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	1265	Open in IMG/M
3300031548\|Ga0307408_101636543	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → unclassified Luteitalea → Luteitalea sp.	612	Open in IMG/M
3300031562\|Ga0310886_10258860	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → unclassified Luteitalea → Luteitalea sp.	977	Open in IMG/M
3300031562\|Ga0310886_10542160	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → unclassified Luteitalea → Luteitalea sp.	707	Open in IMG/M
3300031716\|Ga0310813_11592569	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → unclassified Luteitalea → Luteitalea sp.	610	Open in IMG/M
3300031740\|Ga0307468_101875203	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → unclassified Luteitalea → Luteitalea sp.	570	Open in IMG/M
3300031824\|Ga0307413_12171552	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → unclassified Luteitalea → Luteitalea sp.	503	Open in IMG/M
3300031847\|Ga0310907_10548563	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → unclassified Luteitalea → Luteitalea sp.	624	Open in IMG/M
3300031854\|Ga0310904_10025236	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → unclassified Luteitalea → Luteitalea sp.	2686	Open in IMG/M
3300031854\|Ga0310904_10643503	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → unclassified Luteitalea → Luteitalea sp.	728	Open in IMG/M
3300031858\|Ga0310892_10097321	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → unclassified Luteitalea → Luteitalea sp.	1601	Open in IMG/M
3300031892\|Ga0310893_10021413	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → unclassified Luteitalea → Luteitalea sp.	1908	Open in IMG/M
3300031892\|Ga0310893_10159865	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → unclassified Luteitalea → Luteitalea sp.	882	Open in IMG/M
3300031940\|Ga0310901_10425349	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → unclassified Luteitalea → Luteitalea sp.	583	Open in IMG/M
3300031943\|Ga0310885_10437870	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → unclassified Luteitalea → Luteitalea sp.	703	Open in IMG/M
3300031944\|Ga0310884_10647849	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → unclassified Luteitalea → Luteitalea sp.	635	Open in IMG/M
3300032000\|Ga0310903_10194825	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → unclassified Luteitalea → Luteitalea sp.	945	Open in IMG/M
3300032000\|Ga0310903_10306580	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → unclassified Luteitalea → Luteitalea sp.	783	Open in IMG/M
3300032075\|Ga0310890_10185377	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → unclassified Luteitalea → Luteitalea sp.	1413	Open in IMG/M
3300032075\|Ga0310890_11101478	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → unclassified Luteitalea → Luteitalea sp.	643	Open in IMG/M
3300032122\|Ga0310895_10233606	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → unclassified Luteitalea → Luteitalea sp.	841	Open in IMG/M
3300032157\|Ga0315912_11568408	All Organisms → cellular organisms → Bacteria → Acidobacteria	518	Open in IMG/M
3300032179\|Ga0310889_10067492	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → unclassified Luteitalea → Luteitalea sp.	1447	Open in IMG/M
3300032205\|Ga0307472_101348121	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → unclassified Luteitalea → Luteitalea sp.	689	Open in IMG/M
3300032211\|Ga0310896_10771472	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → unclassified Luteitalea → Luteitalea sp.	549	Open in IMG/M
3300033550\|Ga0247829_10386888	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → unclassified Luteitalea → Luteitalea sp.	1148	Open in IMG/M
3300033550\|Ga0247829_10698781	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → unclassified Luteitalea → Luteitalea sp.	844	Open in IMG/M
3300034147\|Ga0364925_0060635	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → unclassified Luteitalea → Luteitalea sp.	1299	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	73.73%
Host-Associated	Host-Associated	26.27%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	69.49%
Plants	Host-Associated → Plants	26.27%
Aquatic	Environmental → Aquatic	4.24%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	67.80%
Rhizosphere	Host-Associated → Plants → Rhizosphere	18.64%
Rhizoplane	Host-Associated → Plants → Rhizoplane	7.63%
Sediment	Environmental → Aquatic → Sediment	3.39%
Marine	Environmental → Aquatic → Marine	0.85%
Plant Litter	Environmental → Terrestrial → Plant Litter	0.85%
Floodplain	Environmental → Terrestrial → Floodplain	0.85%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	57.63%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	11.02%
Loam	Environmental → Terrestrial → Soil → Loam	9.32%
Soil	Host-Associated → Plants → Rhizosphere → Soil	7.63%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	5.93%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	3.39%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	1.69%
Wetlands	Environmental → Aquatic → Marine → Wetlands	0.85%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	0.85%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified	0.85%
Sediment	Environmental → Terrestrial → Floodplain → Sediment	0.85%

Habitat	Taxonomy	Distribution
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	22.88%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	15.25%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	11.02%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	11.02%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	7.63%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	6.78%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	5.93%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	5.08%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	3.39%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	2.54%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	1.69%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	1.69%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	1.69%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	0.85%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.85%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified	0.85%
Unclassified	Environmental → Terrestrial → Floodplain → Sediment → Unclassified	0.85%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	22.88%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	11.02%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	5.93%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	5.93%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	5.08%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	3.39%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	3.39%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	3.39%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	2.54%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	2.54%
Sugarcane Root And Bulk Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Sugarcane Root And Bulk Soil	2.54%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	2.54%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	2.54%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	1.69%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Corn, Switchgrass And Miscanthus Rhizosphere	1.69%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.69%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	1.69%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	1.69%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	1.69%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	1.69%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	1.69%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	0.85%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.85%
Termite Nest	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Termite Nest	0.85%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.85%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.85%
Natural And Restored Wetlands	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands	0.85%
Plant Litter	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified → Plant Litter	0.85%
Sediment	Environmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment	0.85%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.85%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.85%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.85%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.85%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.85%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.85%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.85%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000363	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000891	Soil microbial communities from Great Prairies - Wisconsin, Continuous corn soil	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300001139	Soil microbial communities from Great Prairies - Wisconsin, Switchgrass soil	Environmental	Open in IMG/M
3300001431	Amended soil microbial communities from Kansas Great Prairies, USA - BrdU F1.4TB clc assemly	Environmental	Open in IMG/M
3300001686	Grasslands soil microbial communities from Hopland, California, USA	Environmental	Open in IMG/M
3300002128	Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5	Environmental	Open in IMG/M
3300003319	Sugarcane bulk soil Sample L2	Environmental	Open in IMG/M
3300003324	Sugarcane bulk soil Sample H2	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004156	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1	Environmental	Open in IMG/M
3300004157	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005213	Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Sandmound_TuleB_D2	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005340	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG	Environmental	Open in IMG/M
3300005353	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG	Host-Associated	Open in IMG/M
3300005354	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG	Host-Associated	Open in IMG/M
3300005441	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG	Environmental	Open in IMG/M
3300005455	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG	Host-Associated	Open in IMG/M
3300005507	Arabidopsis rhizosphere microbial communities from the University of North Carolina - sample Mutant cpr5	Host-Associated	Open in IMG/M
3300005544	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005840	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2	Host-Associated	Open in IMG/M
3300006169	Termite nest microbial communities from Madurai, India	Environmental	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006847	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5	Host-Associated	Open in IMG/M
3300006881	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2	Host-Associated	Open in IMG/M
3300006894	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Control	Environmental	Open in IMG/M
3300006969	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3	Host-Associated	Open in IMG/M
3300007004	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Compost	Environmental	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300009609	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT890	Environmental	Open in IMG/M
3300010044	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot60	Environmental	Open in IMG/M
3300010045	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot61	Environmental	Open in IMG/M
3300010166	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot27	Environmental	Open in IMG/M
3300011427	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT418_2	Environmental	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012910	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S198-509B-2	Environmental	Open in IMG/M
3300012957	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MG	Environmental	Open in IMG/M
3300012958	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MG	Environmental	Open in IMG/M
3300012984	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MG	Environmental	Open in IMG/M
3300012988	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_242_MG	Environmental	Open in IMG/M
3300014259	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNE_CattailB_D1	Environmental	Open in IMG/M
3300014745	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG	Host-Associated	Open in IMG/M
3300015077	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S178-409R-2 (version 2)	Environmental	Open in IMG/M
3300015258	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLIBT45_16_1Da	Environmental	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300018073	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_5_b1	Environmental	Open in IMG/M
3300018469	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 T	Environmental	Open in IMG/M
3300018476	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 T	Environmental	Open in IMG/M
3300019356	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S073-202C-2 (version 2)	Environmental	Open in IMG/M
3300022880	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S106-311C-6	Environmental	Open in IMG/M
3300022908	Plant litter microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-L221-509R-5	Environmental	Open in IMG/M
3300025271	Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with spike-in - S5 (SPAdes)	Environmental	Open in IMG/M
3300025901	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes)	Host-Associated	Open in IMG/M
3300025904	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes)	Host-Associated	Open in IMG/M
3300025926	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025930	Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)	Environmental	Open in IMG/M
3300026075	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300027876	Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S PM (SPAdes)	Host-Associated	Open in IMG/M
3300027880	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3 (SPAdes)	Host-Associated	Open in IMG/M
3300028590	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_PalmiticAcid_Day30	Environmental	Open in IMG/M
3300028809	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_PalmiticAcid_Day48	Environmental	Open in IMG/M
3300031170	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 12_S	Environmental	Open in IMG/M
3300031538	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D1	Environmental	Open in IMG/M
3300031547	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D4	Environmental	Open in IMG/M
3300031548	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3	Host-Associated	Open in IMG/M
3300031562	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D3	Environmental	Open in IMG/M
3300031716	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YN3	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300031824	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2	Host-Associated	Open in IMG/M
3300031847	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D4	Environmental	Open in IMG/M
3300031854	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D1	Environmental	Open in IMG/M
3300031858	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D2	Environmental	Open in IMG/M
3300031892	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D2	Environmental	Open in IMG/M
3300031903	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1	Host-Associated	Open in IMG/M
3300031940	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D2	Environmental	Open in IMG/M
3300031943	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D2	Environmental	Open in IMG/M
3300031944	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D1	Environmental	Open in IMG/M
3300032000	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D3	Environmental	Open in IMG/M
3300032075	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D3	Environmental	Open in IMG/M
3300032122	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D4	Environmental	Open in IMG/M
3300032157	Garden soil microbial communities collected in Santa Monica, California, United States - V. faba soil	Environmental	Open in IMG/M
3300032179	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D2	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300032211	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D1	Environmental	Open in IMG/M
3300033550	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day4	Environmental	Open in IMG/M
3300034147	Sediment microbial communities from East River floodplain, Colorado, United States - 44_j17	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
ICChiseqgaiiFebDRAFT_103691602	3300000363	Soil	VVTPARRVVVTLLVVLAWPAARSVAQSVTVDAVGDALRIRAPGFSFLKGDPLVRLKEGRSVRVELGGLVLPSPGKLPAAAARRVFALSYDLWEE*
INPhiseqgaiiFebDRAFT_1047723351	3300000364	Soil	VVRAGRRAAVALLALLVWPAVECPAQALNVDTVGDALRIRATGVGFLKGEPLTRLKDGRSVRVELAAMVLPGPGKPPAATTRRIFALSYDLWEE
JGI10214J12806_108857053	3300000891	Soil	VASGPFAFALLVLLAWPVSQSSAQSLTIDTTGASLKIRAQGFSFLEGDPLARLKDGRSVRVELTAQVLPAPGKPVAAATRRIFALSYDLWEERFAVTTVDSRAQSVSH
JGI10216J12902_1099730152	3300000956	Soil	VVAPARRAAIVLFVLFAWPATRASAQPVTVDAAGDVLKIRAPGFSFLKGDPLAQLKDGRSVRVELAAMVLPAPGKQPAAVARRIFALSYDLWEERFAVTTTE
JGI10216J12902_1193038721	3300000956	Soil	VILLALLAWPVVRSSAQTLTVDIVGEVLKIRASGVTFLKGDPLARLKDGRSVRIELAAVALPAPGKSPAAT
JGI10220J13317_112160841	3300001139	Soil	VVTAQRVAFALLTVLGLTVAPSSAQTLTVDTAGDSLRIRAPGFSFLNGDPLARLKDGRSVRVELAAMVLPAPGKSVVAATRRIVALSYDLWEERFAVTTVEKRAQSASHLALAAAE
F14TB_1009247641	3300001431	Soil	VVVLALLAWPAVRSSAQTLTVDTVGESLKIHATGFSFLTGDPLARLRDGRSVRLELAAMVLPGPGKSPAATTRRVFALSYDLWE
F14TB_1021256261	3300001431	Soil	MALALVAVLAWPAVRSSAQGLTVDAVGEALRIRAPGFSFLKGEPLARLKDGRSVRVELTXXXXXXXXXXXXXXXXXVFAVSYDLWEE
C688J18823_110103681	3300001686	Soil	MVAAARRAAIVLLALLPWPTVPVSAQALAVDAVGDALKIRAPGFSFVRGEPLARLKDGRAVRVELAALVLAAPGKSPAATTRRIYSLSYDLWEERFAVTAVDAR
JGI24036J26619_100928432	3300002128	Corn, Switchgrass And Miscanthus Rhizosphere	VVTAQRVAFALLTVLGLTVAPSSAQTLTVDTAGDSLRIRAPGFSFLNGDPLARLKDGRSVRVELAAMVLPAPGKSVVAATRRIVALSYDLWEERFAVTTVEKR
soilL2_101224512	3300003319	Sugarcane Root And Bulk Soil	VVTGARPTAVVLLALLTWPTVRVSAQAVTVDAVGNALKIRAPGFTFLKGEPLARLKDGRTVRVELAAMVLPGPRKSP
soilL2_101673732	3300003319	Sugarcane Root And Bulk Soil	VVVFGRRTAIVCLALFAWPVERASAQALTVDRVGDSLKIRAAGFSFLKGEPLTRLKDGRSVRVELAAMVLPAPGKSVVATTRRIFALSYDLWE
soilH2_100398581	3300003324	Sugarcane Root And Bulk Soil	VVVFGRRTAIVCLALFAWPVERASAQALTVDRVGDSLKIRAAGFSFLKGEPLTRLKDGRSVRVELAAMVLPAP
Ga0062593_1000022226	3300004114	Soil	VVARIWRAVPVVLAVLAGSATRASAQPITIDVAGDVLKIRAPGLGFVTGEPLARLKDGRSVRVELAALVLPAPGKSPAAATRRIFALSYDLWEERFA
Ga0062593_1001290292	3300004114	Soil	VVTRRRRAAAVLLALLAWPAVRASAQTVTVDAVGGTLKIRAPGFSFLKGDPLARLKDGRSVRVELAALVMAAPGKSPAAATRRIFALSYDLWEERFAVT
Ga0062589_1008460131	3300004156	Soil	VVTRRRRAAAVLLALLAWPAVRASAQTVTVDAVGGTLKIRAPGFSFLKGDPLARLKDGRSVRVELAALVMAAPGKS
Ga0062590_1005612361	3300004157	Soil	VVARRRRAAVALLALLAWPAAPVSAQTLTVDTAGSTLKIRAPGFSFLKGDPLARLKDGRSVRVELAALVMATPGKSPAAATRRIFALSYDLWEERF
Ga0062590_1019860392	3300004157	Soil	VLARGRPFGRRAAIVGLALLAWPVERSWAQTLTVDTVGDSLRIRAPGFSFLTGDPLARLKDGRSVRVELAAMVLPAPG
Ga0062590_1020222322	3300004157	Soil	VVTPARRAAFALVVLLASPAARALAQPMTVDAAGDVLKVRAPGFSFLKGEPLAQLKDGRSVRVEVAALVLPGPGKPPAAAARRIYSLSYDLWEERFAVTT
Ga0063356_1045574182	3300004463	Arabidopsis Thaliana Rhizosphere	VASAPFALALFVLIAWPAAQSPAQSLTIDTTGGSLKIRAQGFSFLKGDPLARLKDGRSVRVELTAQVLPAPG
Ga0062594_1005428011	3300005093	Soil	VVARIWRAVPVVLAVLACSAVWASAQSLTIDTAGEAMKIRASGFSFLKGEPLARLKDGRSVRVELTAMVLPAPGKSAVATA
Ga0068998_101862312	3300005213	Natural And Restored Wetlands	VCPAVRLLAQPVTVSAAGNALKIRAPGFGFLKGEPLVRLKDGRSVRVELGLLVLPGPGATPAAQSRQTFTISYDLWE
Ga0066388_1070536951	3300005332	Tropical Forest Soil	VVGRGRRAVIALVALLAWLVVDVSAQVLTVDTAGETLKIRASGFSFLKGDPVARLKDGRSVRVELAALVLPGPGKSPVAATRRIFALSYDLWEER
Ga0070689_1015872682	3300005340	Switchgrass Rhizosphere	VVAHSRRAAAALLVLVLWSGARASAQTLNVDTAGDALRIRAPGFSFLKGEPLARLKDGRSVRVELTAMAFLNQGRPAAATARRIFALSYDLWEERF
Ga0070669_1020127342	3300005353	Switchgrass Rhizosphere	VVAPGWRVVVVLLAMLAWPAVRSSAQGLTIDTAADALKIRAPGFSFLKGEPLARLKDGRTVRVELSGLVLPGPGKSPAAAARRIFALSYDLWEERF
Ga0070675_1006135622	3300005354	Miscanthus Rhizosphere	VVAPARRRALALVALLAWPAVRSSAQGLSVDAVGDALTIRAPGFSFLKGEPLARLKDGRSVRVELTGLVLPGPGKQPAAAARRVFALSYDLWEERFAV
Ga0070700_1016620782	3300005441	Corn, Switchgrass And Miscanthus Rhizosphere	VVRPLDSRANALARGTLVVLLALLLWPAVPASAQTLTIDTVGDSLRIRAPGFSFLKGAPLARLKDGRSVRVELAAMVLPAPGKSVVATTRRIFALSYDLWEERFAV
Ga0070663_1005445322	3300005455	Corn Rhizosphere	VALLALLVWPAERSSAQALTVDVVGEVLRIHAPGFSFLKGDPLTRLRDGRSVRVELAALVLPGPGKPAAAAARRVFALSYDLWEERF
Ga0074259_100598011	3300005507	Arabidopsis Rhizosphere	VVRPLDSRANALARGTLVVLLALLLWPAVPASAQTLTIDTVGDSLRIRAPGFSFLKGDPLARLKDGRSVRVELAAMVLPAPGKSVVAT
Ga0070686_1011243201	3300005544	Switchgrass Rhizosphere	VVASARHAAAVLLALVASAPMRVSAQTVTVDTVGDALRIHAPGFSFLKGESLARLKDGRSVRVELVAAV
Ga0070686_1011327491	3300005544	Switchgrass Rhizosphere	VVTAQRVAFALLTVLGLTVAPSSAQTLTVDTAGDSLRIRAPGFSFLNGDPLARLKDGRSVRVELAAMVLPAPGKSVVAATRRIFA
Ga0070686_1014841281	3300005544	Switchgrass Rhizosphere	VVAPARRVAVALLVVLAWPAARSMAQGVTVDTVGGALKIRAPGFSFLKGDPLARLKEGRSVRVELGGLVLPAPGKLPAAAARRVFALSYDL
Ga0066903_1063466431	3300005764	Tropical Forest Soil	VLALLVWPAARASAQTVTIETVGDALKVHAPGFGFLKGDPIARLKDGRSVRVELTALILPGPGKSPAAATRRIFALSYDLWEER
Ga0068870_103580272	3300005840	Miscanthus Rhizosphere	VVTAQRVAFALLTVLGLTVAPSSAQTLTVDTAGDSLRIRAPGFSFLNGDPLARLKDGRSVRVELAAMVLPAPGKSVVAATR
Ga0068870_109888121	3300005840	Miscanthus Rhizosphere	VVAPARRRALALVALLAWPAVRSSAQGLSVDAVGDALTIRAPGFSFLKGEPLARLKDGRSVRVELTGLVLP
Ga0082029_12561321	3300006169	Termite Nest	VVAPVGRIALALVALLAWPAVRSSAQGLTIDVVGDALRIRAPGFSFLKGEPLARLKDGRSVRVELAGLVLPGPGKQPAAAARRVFAVSYDLWEERFAVTTVEARSQSVSHLALTAAEAWCIGQLTIPLSALGSLGSDQPFWI
Ga0075428_1022485951	3300006844	Populus Rhizosphere	VVGNAGQALSLRSGQAALALLVLLASPVAQVSAQAVSVDTSGDGLRIRAPSFSFLQGDPLARLKDGRSVRVELSAMVLSAPGKSPSATARRTFALSYD
Ga0075431_1011675401	3300006847	Populus Rhizosphere	VVGNAGQALSLRSGQAALALLVLLASPVAQVSAQAVSVDTSGDGLRIRAPSFSFLQGDPLARLKDGRSVRVELSAMVLSAPGKSP
Ga0068865_1016176422	3300006881	Miscanthus Rhizosphere	VVARIWRAVPVVLAVLACSAVWASAQSLTIDTAGEAMKIRASGFSFLKGEPLARLKDGRSVRVELTAMVLPAPGKSAVATARRIFALSYD
Ga0079215_103719302	3300006894	Agricultural Soil	VVAPARRAVAVLLALLVWPALRASAQTVTVDTVGEALKIRAPGFSFLKGDALARLKDGRSVRVELAAMILPAP
Ga0075419_100378731	3300006969	Populus Rhizosphere	VVTPARHVVVVLLAMLAWPAVRSSAQGLTIDTAGDALKIRAPGFSFLKGEPLARLKDGRTVRVELSGLVLPGPGKSPA
Ga0079218_137244721	3300007004	Agricultural Soil	VVTPAGRAAVALLALLAWPDVHASAQALTTHTVGDALKVRAPGLRFLNGDPLARLKDGRSVRVELAALILAAPGKSPATTARRIFSLSYDLWEERFAVTVVD
Ga0114129_108373891	3300009147	Populus Rhizosphere	VAVLAVLAWPDRPVSAQTLAVDTAGEALKIRVVGFSFLKGEPIARLKDGRSVRVELAAMVLPGAGRPAVATARRIFALSYDLWEER
Ga0111538_104770492	3300009156	Populus Rhizosphere	VVTPARHVVVVLLAVLAWPAVRSSAQGLTIDTAGDALKIRAPGFSFLKGEPLARLKDGRTVRVELSGLVLPGPGKSPAAAARRIFALSYDLWEERFA
Ga0111538_123103991	3300009156	Populus Rhizosphere	VVAPARRVAVALLVVLAWPAARSMAQSVTVDAAGDALKIRAPGFSFLKGDPLTRLRDGRSVRVELAALVLPGPGKPAAAAARHVFAL
Ga0105249_107344732	3300009553	Switchgrass Rhizosphere	MLAFLAWPALRLSAQTVTVDTVGEALRIRAPGFSFLKGDPLARLKDGRSVRVEIAAMVLPAPGKPP
Ga0105347_14711011	3300009609	Soil	VAALLVLLAWPAARSMAQSVTVEAAGDALKIRAPGFSFLKGDPLVRLKEGRSVRVELGGLVLPAPGKLPAAAARRVFALSYDLWEERF
Ga0126310_112063712	3300010044	Serpentine Soil	MVAAARRAAVVLLALLPWPTVPVSAQALAVDAVGDALKIRAPGFSFLRGDPLARLKDGRAVRVELAALVLAAPGKSPVATTRRIYSLSYDL
Ga0126311_110836412	3300010045	Serpentine Soil	VVAQGRRATVVLLAFLAWPVVSPAQGVTVETAGDALKIRAPGFSFLRGDPLARLKDGRSVRVELAAMVLPRPGTSPAATARRVFAVS
Ga0126306_109943552	3300010166	Serpentine Soil	VVTPAHRLVAARLVLLALPAARSCAQVMSVDAVGDALKIRAPGFSFLKGDPLARLKDGRSVRVELGGLVLPAPGKAPAAATRRIFALSYDLWEERFAVSTVEARAQSVSHLALTAVEGWCID
Ga0137448_11831681	3300011427	Soil	LLALLAWPADRLSAQTLTVDLVGEVLRIRAPGFSFLTGDPLARLKGGRSVRVELAAMVLPAPGKP
Ga0150984_1056127181	3300012469	Avena Fatua Rhizosphere	VLVWPAVPSSAQTLAVDTVGDAVRIRAPGFSFLKGDPLARLKDGRSVRIELAAMVLPAPGKSVV
Ga0150984_1142775532	3300012469	Avena Fatua Rhizosphere	VVLLALLAWPVSGSSAQSVTVDTAGEMVKIRAPGFTFLKGDPLARLKEGRSVRVELAAMVLPAPGKPAAAITRR
Ga0157308_100382551	3300012910	Soil	VVTAQRVAFALLTVLGLTVAPSSAQTLTVDTAGDSLRIRAPGFSFLNGDPLARLKDGRSVRVELAAMVLPAPGKSVVAATRRIVALSYDLWEERFAVTTVEK
Ga0164303_105650482	3300012957	Soil	MLLVLVASAPMRVSAQTVTVDTVGDALRIHAPGFSFLKGETQARLKDGRSVRVELVAAVLSAPGKSAAATTRRIF
Ga0164299_104676992	3300012958	Soil	VVAVGRRTAIVLLASVVWPAARLSAQTLNVDTVGDSLRIRAPGFSFLKGDPLARLKDGRSVRVELAAMVLPAPGKSVVAT
Ga0164309_116956141	3300012984	Soil	VLLALLAWPASVSWAQAVTVDTVGTTVKIRAPGFSFLTGDPLARLKEGRSVRVELAAMVLPGPGKPAAAT
Ga0164306_113955101	3300012988	Soil	VVAVGRRTAIVLLASVVWPAARLSAQTLNVDTVGDSLRIRAPGFSFLKGDPLARLKDGRSVRVELAAMVLPAPGKS
Ga0075311_10622211	3300014259	Natural And Restored Wetlands	LFVLALIVCPSTRAAAQAVSVTTAGDALQIRAPGFTFLKGEPLARLTDGRSVRVELALMVLPGPGRAPVASARQLFALSYD
Ga0157377_100984931	3300014745	Miscanthus Rhizosphere	VVTAQRVAFALLTVLGLTVAPSSAQTLTVDTAGDSLRIRAPGFSFLNGDPLARLKDGRSVRVELAAMVLPAPGKSVVAATRRIVALSYDLWEERFAV
Ga0173483_101447662	3300015077	Soil	MVAAARRAALVLLALLPWPTVPLSAQALAVDVVGDALKIRAPGFSFLKGDPLARLKDGRAVRVELAALVLAGPGKSPTAAARRTYSLSYDLWEERIAVSAVDA
Ga0173483_109500762	3300015077	Soil	VVTAQRVAFALLTVLGLTVAPSSAQTLTADTAGDSLRIRAPGFSFLNGDPLARLKDGRSVRVELAAMVLPAPGKSVVAATRRIVALSYDLWEERFAVTTVEKRAQSASHLALAAA
Ga0180093_10868261	3300015258	Soil	LSAQTLTVDIVGEMVKVRASGFSFLQGGPLTRLKDGRSVRVELAALALAGPGKSPAATARRSFSLSYDLWEERFAVTTVDTRSQSASHLSMAAAEAWC
Ga0132256_1001237573	3300015372	Arabidopsis Rhizosphere	VVAHVRRAALLLALIAWPAARSSAQSLTYELVGDALKIRAPAFSFLKGDPLARLQDGRSVRVELAAMVLAAPGKSPAATTRRVFALSYDLWEERFAVTAV
Ga0132257_1006470561	3300015373	Arabidopsis Rhizosphere	VVTARGAVVALLALLVWPAERSSAQALTVDVVGEVLRIRAPGFSFLKGDPLTRLRDGRSVRVELAALVLPGPGKPAAAA
Ga0184624_103778462	3300018073	Groundwater Sediment	VVAPARRVAVALLAVLAWPAAPSMAQTVTVDTVGGALKIRAPGFSFLKGDPLARLKEGRSVRVELGGLVLPAPGKLPAAAARRVFALSY
Ga0190270_115361481	3300018469	Soil	VVVPARRAAIVLLALLVAPDLRPSAQTLTVDIVGEMLKIRASGFSFLQGNPLARLKDGRSVRVELAAIALAGPGKSPAATARRSFA
Ga0190274_127854251	3300018476	Soil	VVAPARRAVAVLLALLVWPAVRSSAQTVTVDTVGEALKIRAPGFSFLKGDPLARLKDGRSVRVELAAMVLPAPGKSPAATT
Ga0173481_100773662	3300019356	Soil	VVAPGWRVVVVLLAMLAWPAVRSSAQGLTIDTAADALKIRAPGFSFLKGEPLARLKDGRTVRVELSGLVLPGPGKSPAAAARRIFALSYD
Ga0247792_10187692	3300022880	Soil	VVTAQRVAFALLTVLGLTVAPSSAQTLTVDTAGDSLRIRAPGFSFLNGDPLARLKDGRSVRVELAAMVLPAPGKSVVAATRRIVALSYDLWEERFAVTTVEKRAQSASHLAL
Ga0247779_11160252	3300022908	Plant Litter	VVARAGRAAVLLLALLAPAPRVSAQAVTVDTVGEAVKIRAPGFSFLKGDPLVRLKEGRSVRVELAALVLPAPGKAAAATARRTFALSYDLWEDRLAVTTVDA
Ga0207666_10104572	3300025271	Corn, Switchgrass And Miscanthus Rhizosphere	VVTAQRVAFALLTVLGLTVAPSSAQTLTVDTAGDSLRIRAPGFSFLNGDPLARLKDGRSVRVELAAMVLPAPGKSVVATTRRIFALSYDL
Ga0207688_107876411	3300025901	Corn, Switchgrass And Miscanthus Rhizosphere	VVAPGWRVVVVLLAMLAWPAVRSSAQGLTIDTAADALKIRAPGFSFLKGEPLARLKDGRTVRVELSGLVLPGPGKSPAAAARRI
Ga0207647_105497301	3300025904	Corn Rhizosphere	VVAPGWRVVVVLLAMLAWPAVRSSAQGLTIDTAADALKIRAPGFSFLKGDPLARLKDGRSVRVELAALVMAAPGKSPAAATRRIFALSYN
Ga0207659_100411451	3300025926	Miscanthus Rhizosphere	VVLAVLAGSATRASAQPITIDVAGDVLKIRAPGLGFVTGEPLARLKDGRSVRVELAALVLPAPGKSPAAATRRIFALSYDL
Ga0207659_104645182	3300025926	Miscanthus Rhizosphere	VVTAQRVAFALLTVLGLTVAPSSAQTLTVDTAGDSLRIRAPGFSFLNGDPLARLKDGRSVRVELAAMVLPAPGKSVVAATRRIF
Ga0207659_107287891	3300025926	Miscanthus Rhizosphere	VVAPARRRALALVALLAWPAVRSSAQGLSVDAVGDALTIRAPGFSFLKGEPLARLKDGRSVRVELTGLVLPGPGKQPAAAARRVFALS
Ga0207701_101130961	3300025930	Corn, Switchgrass And Miscanthus Rhizosphere	VVAPGWRVVVVLLAMLAWPAVRSSAQGLTIDTAADALKIRAPGFSFLKGEPLARLKDGRTVRVELSGLVLPGPGKSPAAAARR
Ga0207708_118672682	3300026075	Corn, Switchgrass And Miscanthus Rhizosphere	VVRPLDSRANALARGTLVVLLALLLWPAVPASAQTLTIDTVGDSLRIRAPGFSFLKGAPLARLKDGRSVRVELAAM
Ga0209974_100332212	3300027876	Arabidopsis Thaliana Rhizosphere	MVAAARRAALVLLALLPWPTVPVSAQALAVDVVGDALKIRAPGFSFLKGDPLARLKDGRAVRVELAALVLAGPGKSPAAAARRTYSLSYDLWEER
Ga0209481_102922672	3300027880	Populus Rhizosphere	MLAWPAVRSSAQGLTIDTAGDALKIRAPGFSFLKGEPLARLKDGRTVRVELSGLVLPGPGKSPAAAARR
Ga0247823_105631211	3300028590	Soil	VSARRAVLVSIALLVWPVVRSSAQALTVETAGDALRLRAPGFSFLTGEPLTRLKDGRTVRMELAAMVLPAPGKLPAATIRRVFAL
Ga0247824_104301491	3300028809	Soil	VSARRAVLVSIALLVWPVVRSSAQALTVETAGDALRLRAPGFSFLTGEPLTRLKDGRTVRMELAAMVLPAPGKLPAATIRRVFALSYD
Ga0307498_103278961	3300031170	Soil	VLVALLVWSGVPLSAQTLTIDTAGDALKIRAPGFSFLKGEPAARLKDGRSVRVELAAIVLAGPGKAPAATIRRIFSLSYDLWEERFAVTTLGSRAQSVSHLA
Ga0310888_101616022	3300031538	Soil	VVAPALRAAVALLAVLVSLALPASAQLLTVDTVGDALKIRAPAFSFLNGDPLVRLKDGRSVRVELSAMVLSGPGKSPAATIRRMFAVSYDLWEERFAVT
Ga0310888_103326371	3300031538	Soil	MALALVAVLAWPAVRSSAQGLTVDAVGEALRIRAPGFSFLKGEPLARLKDGRSVRVELTSLVLPGPGKQPAAAARRVFAVSYDLWEERFAVTTVEARSQSVSHLALTAAEAWCV
Ga0310888_106570661	3300031538	Soil	VLLALVASAPMRVSAQTVTVDTVGDALRIHAPGFSFLKGESLARLKDGRSVRVELVAAVLSAPGKSAAATTRR
Ga0310887_106262981	3300031547	Soil	VVAPARRVALALLVVLAWPAAPSMAQGVTVDAVGDALKIRAPGFSFLKGDPLARLKEGRSVRVEVGGLVLPAPGKLPAAAA
Ga0310887_106469982	3300031547	Soil	VVAASGPFALALFVLLAWPAAQSPAQSLTIDTSGGSLKIRAQGFSFLKGDPLARLKDGRSVRVELTAQVLPAPGKPVAAATRRIFALSYDL
Ga0307408_1003427581	3300031548	Rhizosphere	VVAAAGRIALALVVLVAWSAVRSSAQGLTVDAVGDALRIRAPGFSFLKGEPLARLKDGRSVRLELTALVLPGPGKQPAAAARRVFAVSYDLWEERFAVTTV
Ga0307408_1016365431	3300031548	Rhizosphere	VVAPGRRAAVVLLALLIWPVLEVSAQGLKVDAVGEALKIRAAGFSFLKGDPLARLKDGRSVRVELAAMVLPGPGKSPAATARRIFALSY
Ga0310886_102588601	3300031562	Soil	MALALVAVLAWPAVRSSAQGLTVDAVGEALRIRAPGFSFLKGEPLARLKDGRSVRVELTSLVLPGPGKQPAAAARRVFAVSYDLWEERFAVTTVEARSQSV
Ga0310886_105421602	3300031562	Soil	VVVPHRRAVVALLAVLAWPAARSSAQVMTVDAMGSMLKIRAPGFSFLKGDPIARLKDGRSVRVELTAMVLPAPGKSPSTMARRIFALS
Ga0310813_115925691	3300031716	Soil	VVAHARGAAAIVLALLVWPALRASAQTVTIEAVGDAVKLRAPGFSFLKGDPIARLKDGRSVRVELTALVLAAPGKSPAAATRRIFALSY
Ga0307468_1018752032	3300031740	Hardwood Forest Soil	VALLVVLAWPAAPSMAQSVTVDTVGGALKIRAPGFSFLKGDPLARLKEGRSVRVELGGLVLPAPGKLPAAAARRVFALS
Ga0307413_121715522	3300031824	Rhizosphere	VVAPAGRIALALVALLAWPAVRSSAQGLTVDAVGDALRIRAPGFSFLKGEPLARLKDGRSVRLELTGLVLP
Ga0310907_105485632	3300031847	Soil	VVAQARRVAVALLVVLAWPAARSMAQSVTVDAAGDALKIRAPGFSFLKGDPLARLKEGRSVRVELGGLVLPAPGKLPAAAARRVFALSY
Ga0310904_100252361	3300031854	Soil	VVAPGWRVVVVLLAMLAWPAVRSSAQGLTIDTAADALKIRAPGFSFLKGEPLARLKDGRTVRVELSGLVLPGPGKSPAAAARRISALSYDLWEERFAV
Ga0310904_106435031	3300031854	Soil	VVAPLRRAAVVLIASLAWPAAPVFAQSVTVDPVGDRLRIRAPGFTFLKGDPLVRLKDGRSVRVELAAMVLAGPGKPAAV
Ga0310892_100973211	3300031858	Soil	MALALVAVLAWPAVRSSAQGLTVDAVGEALRIRAPGFSFLKGEPLARLKDGRSVRVELTSLVLPGPGKQPAAAARRVFAVS
Ga0310893_100214131	3300031892	Soil	VVTPQRVAAALLTVLGLTVAPSSAQTLTVDTAGDSLRIRAPGFSFLNGDPLARLKDGRSVRVELAAMVLPAPGKSVVAATRRIF
Ga0310893_101598651	3300031892	Soil	VVAPARHVVVVLLAMLAWPAVRSSAQGLTIDTVGDALKIRAPGFSFLKGEPLARLKDGRTVRVELSGLVLPGPGKS
Ga0307407_101629712	3300031903	Rhizosphere	VVAAAGRIALALVVLVAWSAVRSSAQGLTVDAVGDALRIRAPGFSFLKGEPLARLKDGRSVRLELTGLVLPGPGKQPAAAARRVFAVSYDLWEERFAVTTVEARSQSVSHLALTAAEAWCVGQLTIPLSALGSLGSDQPFWIRLEHHILD
Ga0310901_104253492	3300031940	Soil	VVAPARRVAVALLVVLAWPAARSMAQSVTVDAVGDALKIRAPGFSFLKGDPLALLKEGRSVRVELGGLVLPAPGKL
Ga0310885_104378702	3300031943	Soil	MLLALLACPVARVSAQALTVDVVADALKIRAPAFSFLNGDPLARLKDGRSVRVELAALVLAGPGKSPTAATRRV
Ga0310884_106478491	3300031944	Soil	VVTPARHVVVVLLAMLAWPAVRSSAQGLTIDTAGDALKIRAPGFSFLKGEPLARLKDGRTVRVELSGLVLPGPGKSPAAAARRIFAL
Ga0310903_101948252	3300032000	Soil	VVAPARHVVVVLLAMLAWPAVRSSAQGLTIDTAGDALKIRAPGFSFLKGEPLARLKDGRTVRVELSGLVLPGPGK
Ga0310903_103065801	3300032000	Soil	VVTRRRRAAAVLLALLAWPAVRASAQTVTVDAVGGTLKIRAPGFSFLKGDPLARLKDGRSVRVELAALVMAAPGKSPAAATRR
Ga0310890_101853771	3300032075	Soil	VVAPALRAAVALLAVLVSLALPASAQVLTVDTVGDALKIRAPAFSFLNGDPLVRLKDGRSVRVELSAMVLSGPGKSPAATIRRMFAVSYDLWEERFAVTAV
Ga0310890_111014781	3300032075	Soil	VVAPARHVVVVLLAMLAWPAVRSSAQGLTIDTAGDALKIRAPGFSFLKGDPLARLKEGRSVRVELGGLVLPAPGKLPAAA
Ga0310895_102336061	3300032122	Soil	MALALVAVLAWPAVRSSAQGLTVDAVGEALRIRAPGFSFLKGEPLARLKDGRSVRVELTSLVLPGPGKQPAAAARRVFAVSYDLWEERFAVTTVEARSQSVSHLALTA
Ga0315912_115684081	3300032157	Soil	VVAVRIRQTAAVLLALVTSLAVQSSAQTMTVEAAGDALRIRAPGFSFLKGDPLARLKDGRSVRVELTAMVLPGPGKSPAAMTRRIVALSYDLWEERFAVTAVDKRAQSVSHLT
Ga0310889_100674922	3300032179	Soil	VVAPARRVAVALLVVLAWPAARSMAQSVTVDAVGDALKIRAPGFSFLKGDPLALLKEGRSVRVELGGLVLPAPGKLPAAAARRVF
Ga0307472_1013481211	3300032205	Hardwood Forest Soil	MWLALLMCPVAQLSAQTLTVDTVGDSLKIRAPGFSFLKGDPLVRLKDGRSVRVELAALVLPSPGKSPAAATRRIFAVSYDLWE
Ga0310896_107714722	3300032211	Soil	VVASGRAAVVLLALVASAPMRVSAQPVTVDTVGAALRIHAPGFSFLKGEPLARLKDGRSVRVELVAAVLSAPGKS
Ga0247829_103868882	3300033550	Soil	VVTPARRVVVALLVVFAWPAARSRAQSVTVDAVGDALRIRAPGFSFLKGDPLVQLKEGRSVRVELGGLVLPAPGKLPAAAARRVF
Ga0247829_106987812	3300033550	Soil	VAPDLRPSAQTVTVDIVGEMLKIRASGFSFLQGNPLARLKDGRSVRVELAAIALAGPGKSPAATARRSFALSYDLWEERFAVTTVDTRSQSASHL
Ga0364925_0060635_985_1299	3300034147	Sediment	VILLALLACPVARASAQALTVDIVGDALKIRAPAFSFLNGDPLARLKDGRSVRVELAAMVLAAPGKSPAAATRRIFALSYDLWEERFAAAVSGTGSRSVSHLTAA

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F076473

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences