Metagenome / Metatranscriptome Family F076317

Basic Information
Family ID	F076317
Family Type	Metagenome / Metatranscriptome
Number of Sequences	118
Average Sequence Length	45 residues
Representative Sequence	TMPWTATITYGRGSGAWEEIVCAENRHEYYYNKDSDVPTADKPDF
Number of Associated Samples	93
Number of Associated Scaffolds	118

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	0.00 %
% of genes near scaffold ends (potentially truncated)	14.41 %
% of genes from short scaffolds (< 2000 bps)	12.71 %
Associated GOLD sequencing projects	86
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.20

Most Common Taxonomy
Group	Unclassified (90.678 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (18.644 % of family members)
Environment Ontology (ENVO)	Unclassified (24.576 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (60.169 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 8.22% β-sheet: 0.00% Coil/Unstructured: 91.78%
Feature Viewer

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Pfam ID	Name	% Frequency in 118 Family Scaffolds
PF03401	TctC	5.93
PF05016	ParE_toxin	2.54
PF05443	ROS_MUCR	1.69
PF04168	Alpha-E	1.69
PF00753	Lactamase_B	1.69
PF10098	DUF2336	0.85
PF14226	DIOX_N	0.85
PF04392	ABC_sub_bind	0.85
PF00034	Cytochrom_C	0.85
PF13439	Glyco_transf_4	0.85
PF01738	DLH	0.85
PF09084	NMT1	0.85
PF13518	HTH_28	0.85
PF03692	CxxCxxCC	0.85
PF07592	DDE_Tnp_ISAZ013	0.85
PF07969	Amidohydro_3	0.85
PF00248	Aldo_ket_red	0.85
PF01053	Cys_Met_Meta_PP	0.85
PF07676	PD40	0.85
PF12969	DUF3857	0.85
PF09899	DUF2126	0.85
PF16861	Carbam_trans_C	0.85
PF14714	KH_dom-like	0.85
PF13531	SBP_bac_11	0.85
PF01548	DEDD_Tnp_IS110	0.85
PF03972	MmgE_PrpD	0.85
PF01977	UbiD	0.85
PF07690	MFS_1	0.85
PF09828	Chrome_Resist	0.85
PF13596	PAS_10	0.85
PF13440	Polysacc_synt_3	0.85
PF13442	Cytochrome_CBB3	0.85
PF13669	Glyoxalase_4	0.85
PF03928	HbpS-like	0.85
PF10604	Polyketide_cyc2	0.85
PF13538	UvrD_C_2	0.85
PF00015	MCPsignal	0.85
PF00126	HTH_1	0.85
PF06463	Mob_synth_C	0.85

COG ID	Name	Functional Category	% Frequency in 118 Family Scaffolds
COG3181	Tripartite-type tricarboxylate transporter, extracytoplasmic receptor component TctC	Energy production and conversion [C]	5.93
COG0840	Methyl-accepting chemotaxis protein (MCP)	Signal transduction mechanisms [T]	1.69
COG2307	Uncharacterized conserved protein, Alpha-E superfamily	Function unknown [S]	1.69
COG4957	Predicted transcriptional regulator	Transcription [K]	1.69
COG0043	3-polyprenyl-4-hydroxybenzoate decarboxylase	Coenzyme transport and metabolism [H]	0.85
COG0075	Archaeal aspartate aminotransferase or a related aminotransferase, includes purine catabolism protein PucG	Amino acid transport and metabolism [E]	0.85
COG0156	7-keto-8-aminopelargonate synthetase or related enzyme	Coenzyme transport and metabolism [H]	0.85
COG0399	dTDP-4-amino-4,6-dideoxygalactose transaminase	Cell wall/membrane/envelope biogenesis [M]	0.85
COG0436	Aspartate/methionine/tyrosine aminotransferase	Amino acid transport and metabolism [E]	0.85
COG0520	Selenocysteine lyase/Cysteine desulfurase	Amino acid transport and metabolism [E]	0.85
COG0626	Cystathionine beta-lyase/cystathionine gamma-synthase	Amino acid transport and metabolism [E]	0.85
COG0715	ABC-type nitrate/sulfonate/bicarbonate transport system, periplasmic component	Inorganic ion transport and metabolism [P]	0.85
COG1921	Seryl-tRNA(Sec) selenium transferase	Translation, ribosomal structure and biogenesis [J]	0.85
COG1982	Arginine/lysine/ornithine decarboxylase	Amino acid transport and metabolism [E]	0.85
COG2008	Threonine aldolase	Amino acid transport and metabolism [E]	0.85
COG2079	2-methylcitrate dehydratase PrpD	Carbohydrate transport and metabolism [G]	0.85
COG2873	O-acetylhomoserine/O-acetylserine sulfhydrylase, pyridoxal phosphate-dependent	Amino acid transport and metabolism [E]	0.85
COG2896	GTP 3',8-cyclase (molybdenum cofactor biosynthesis protein MoaA)	Coenzyme transport and metabolism [H]	0.85
COG2984	ABC-type uncharacterized transport system, periplasmic component	General function prediction only [R]	0.85
COG3547	Transposase	Mobilome: prophages, transposons [X]	0.85
COG4100	Cystathionine beta-lyase family protein involved in aluminum resistance	Inorganic ion transport and metabolism [P]	0.85
COG4521	ABC-type taurine transport system, periplasmic component	Inorganic ion transport and metabolism [P]	0.85

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	90.68 %
All Organisms	root	All Organisms	9.32 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	90.68 %
cellular organisms	root	All Organisms → cellular organisms	9.32 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	90.68 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	9.32 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	90.68 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	5.08 %
Nitrospirae	phylum	All Organisms → cellular organisms → Bacteria → Nitrospirae	1.69 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.85 %
environmental samples	no rank	All Organisms → cellular organisms → Bacteria → environmental samples	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	90.68 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3.39 %
Nitrospira	class	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira	1.69 %
uncultured bacterium 12AC_lac13	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium 12AC_lac13	0.85 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	90.68 %
Nitrospirales	order	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales	1.69 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1.69 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	0.85 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.85 %
uncultured bacterium 12AC_lac13	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium 12AC_lac13	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	90.68 %
Nitrospiraceae	family	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae	1.69 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1.69 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.85 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.85 %
uncultured bacterium 12AC_lac13	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium 12AC_lac13	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	90.68 %
Candidatus Magnetobacterium	genus	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Candidatus Magnetobacterium	1.69 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1.69 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.85 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.85 %
uncultured bacterium 12AC_lac13	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium 12AC_lac13	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	90.68 %
Candidatus Magnetobacterium casensis	species	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Candidatus Magnetobacterium → Candidatus Magnetobacterium casensis	1.69 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1.69 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.85 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.85 %
uncultured bacterium 12AC_lac13	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium 12AC_lac13	0.85 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300005436\|Ga0070713_102436144	Not Available	506	Open in IMG/M
3300006800\|Ga0066660_11641652	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium 12AC_lac13	510	Open in IMG/M
3300010876\|Ga0126361_10269134	Not Available	554	Open in IMG/M
3300012207\|Ga0137381_10717489	Not Available	869	Open in IMG/M
3300016371\|Ga0182034_10026408	All Organisms → cellular organisms → Bacteria → Proteobacteria	3558	Open in IMG/M
3300016387\|Ga0182040_10352325	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Candidatus Magnetobacterium → Candidatus Magnetobacterium casensis	1142	Open in IMG/M
3300019888\|Ga0193751_1095264	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1156	Open in IMG/M
3300021178\|Ga0210408_10969913	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	659	Open in IMG/M
3300021405\|Ga0210387_10187724	All Organisms → cellular organisms → Bacteria → Proteobacteria	1788	Open in IMG/M
3300026551\|Ga0209648_10258993	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1281	Open in IMG/M
3300027894\|Ga0209068_10931986	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	515	Open in IMG/M
3300028800\|Ga0265338_11044335	Not Available	552	Open in IMG/M
3300031941\|Ga0310912_10265572	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Candidatus Magnetobacterium → Candidatus Magnetobacterium casensis	1323	Open in IMG/M
3300031942\|Ga0310916_11115941	Not Available	655	Open in IMG/M
3300032094\|Ga0318540_10087376	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1453	Open in IMG/M
3300032157\|Ga0315912_11455831	Not Available	540	Open in IMG/M
3300032515\|Ga0348332_14728198	All Organisms → cellular organisms → Bacteria	2491	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	98.31%
Host-Associated	Host-Associated	1.69%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	84.75%
Aquatic	Environmental → Aquatic	13.56%
Plants	Host-Associated → Plants	1.69%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	82.20%
Sediment	Environmental → Aquatic → Sediment	8.47%
Freshwater	Environmental → Aquatic → Freshwater	5.08%
Rhizosphere	Host-Associated → Plants → Rhizosphere	1.69%
Peat	Environmental → Terrestrial → Peat	0.85%
Plant Litter	Environmental → Terrestrial → Plant Litter	0.85%
Rock-Dwelling (Subaerial Biofilms)	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms)	0.85%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	61.86%
Loam	Environmental → Terrestrial → Soil → Loam	14.41%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	8.47%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	5.93%
Sediment	Environmental → Aquatic → Freshwater → Sediment	2.54%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	2.54%
Soil	Host-Associated → Plants → Rhizosphere → Soil	1.69%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	0.85%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified	0.85%
Unclassified	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified	0.85%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	31.36%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	24.58%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	12.71%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	8.47%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	5.08%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	3.39%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	2.54%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	2.54%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	2.54%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	1.69%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	1.69%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	0.85%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	0.85%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified	0.85%
Unclassified	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified → Unclassified	0.85%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	18.64%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	12.71%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	8.47%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	7.63%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	6.78%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	5.93%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	4.24%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	4.24%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	3.39%
Watersheds	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Watersheds	2.54%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	2.54%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	2.54%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	2.54%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	1.69%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	1.69%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	1.69%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	1.69%
Boreal Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil	1.69%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	0.85%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost	0.85%
Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Peatland	0.85%
Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Soil	0.85%
Palsa	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Palsa	0.85%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost	0.85%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	0.85%
Plant Litter	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified → Plant Litter	0.85%
Exposed Rock	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified → Unclassified → Exposed Rock	0.85%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere	0.85%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.85%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001593	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2	Environmental	Open in IMG/M
3300004092	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005538	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1	Environmental	Open in IMG/M
3300005610	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005994	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 3 DNA2013-049	Environmental	Open in IMG/M
3300006031	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Angelo_100	Environmental	Open in IMG/M
3300006046	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101	Environmental	Open in IMG/M
3300006050	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2014	Environmental	Open in IMG/M
3300006086	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2013	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300006354	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2012	Environmental	Open in IMG/M
3300006800	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300010876	Boreal forest soil eukaryotic communities from Alaska, USA - W5-5 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300010880	Boreal forest soil eukaryotic communities from Alaska, USA - C5-1 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300011270	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaG	Environmental	Open in IMG/M
3300012004	Permafrost microbial communities from Nunavut, Canada - A30_5cm_6M	Environmental	Open in IMG/M
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012351	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_100_16 metaG	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300014156	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin01_60_metaG	Environmental	Open in IMG/M
3300014489	Permafrost microbial communities from Stordalen Mire, Sweden - 812P2M metaG	Environmental	Open in IMG/M
3300014501	Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300014657	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_10_metaG	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300017970	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300017975	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018064	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP05_10_MG	Environmental	Open in IMG/M
3300019888	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L1c2	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300021374	Barbacenia macrantha exposed rock microbial communities from rupestrian grasslands, the National Park of Serra do Cipo, Brazil - ER_R08	Environmental	Open in IMG/M
3300021405	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-O	Environmental	Open in IMG/M
3300021475	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-O	Environmental	Open in IMG/M
3300021477	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-O	Environmental	Open in IMG/M
3300021861	Metatranscriptome of freshwater sediment microbial communities from post-fracked creek in Pennsylvania, United States - ABR_2016 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300021968	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L3c1	Environmental	Open in IMG/M
3300025919	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026359	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NR-06-A	Environmental	Open in IMG/M
3300026551	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm (SPAdes)	Environmental	Open in IMG/M
3300027164	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA Ref_O3 (SPAdes)	Environmental	Open in IMG/M
3300027869	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027889	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6 (SPAdes)	Environmental	Open in IMG/M
3300027894	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2012 (SPAdes)	Environmental	Open in IMG/M
3300027903	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)	Environmental	Open in IMG/M
3300027911	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012 (SPAdes)	Environmental	Open in IMG/M
3300028800	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG	Host-Associated	Open in IMG/M
3300028807	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_186	Environmental	Open in IMG/M
3300028906	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)	Environmental	Open in IMG/M
3300029636	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300029944	II_Palsa_E1 coassembly	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031768	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f22	Environmental	Open in IMG/M
3300031771	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19	Environmental	Open in IMG/M
3300031782	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f20	Environmental	Open in IMG/M
3300031835	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f21	Environmental	Open in IMG/M
3300031846	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f19	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032064	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f17	Environmental	Open in IMG/M
3300032066	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f18	Environmental	Open in IMG/M
3300032094	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f25	Environmental	Open in IMG/M
3300032120	Metatranscriptome of spruce rhizosphere microbial communities from Bohemian Forest, Czech Republic - CZA5 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300032157	Garden soil microbial communities collected in Santa Monica, California, United States - V. faba soil	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300032515	FICUS49499 Metatranscriptome Czech Republic combined assembly (additional data)	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M
3300033808	Tropical peat soil microbial communities from peatlands in Loreto, Peru - MAQ_100_20	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12635J15846_103513432	3300001593	Forest Soil	VLTTPWTATITFGRGANEWPETVCAENIRQYYRKDSEVPTAAKPDF*
Ga0062389_1005573001	3300004092	Bog Forest Soil	ATITYGRGSTDWPETVCAENIQEYYNHKESDVPRADKPDF*
Ga0066395_107788293	3300004633	Tropical Forest Soil	MPWSATITYGRGSTDWPETVCAENIQEYYNNKESDVPRAGRPDF*
Ga0066388_1024987761	3300005332	Tropical Forest Soil	TITYGRGSGQWQEIICAENRHEYYNNKDSDVPTADKPDF*
Ga0066388_1072167382	3300005332	Tropical Forest Soil	MPWSATITYRRGLNETPEYVCADNIHEYHESKDRVVPAATTLDF*
Ga0070713_1024361442	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	DAGVFTTPWTATLTYVPGNEVGEGVCAENRHEYYNNKDSDVPTAERPDF*
Ga0070731_100438884	3300005538	Surface Soil	ATVTYGRGSNEWPETVCAENRHEYYNNKESDVPTAKTPDF*
Ga0070763_108411213	3300005610	Soil	PWSATITYRPARDPWQEIICAENTHEYYYNKNSEVPTANKPDF*
Ga0066903_1000104411	3300005764	Tropical Forest Soil	VFTAPWSATITYGRGSGQWQEIICAENRHEYYNNKDSDVPTADKLDF*
Ga0066903_1028590041	3300005764	Tropical Forest Soil	ATVTYGRGSNDWPETVCAENIHEYYNNKNSDVPQADKPDF*
Ga0066903_1031212611	3300005764	Tropical Forest Soil	WSATITYGRGSTDWPETVCAENIHEYYNNKESDVPRADSPDF*
Ga0066903_1089477621	3300005764	Tropical Forest Soil	VFTAPWSATITYGRGSGQWQEIICAENRHEYYNNKDSDVPTADKPDF*
Ga0066903_1090459192	3300005764	Tropical Forest Soil	FTVEDEGVFTMPWSATITYGPGSGEWEEIVCADNRHEYYNNKDTEVPTASRPDF*
Ga0066789_102863191	3300005994	Soil	VFTMPWSATITYGPGSGEWIEIVCADNRREYYNNKDSDVPTADKPDF*
Ga0066651_105887152	3300006031	Soil	FTMPWSATITYRRGVGPWREYVCAENREEYYNNKESDVPTAHKPDF*
Ga0066652_1018586112	3300006046	Soil	TVEDEGAFTMPWTATITYRPAPAPWQETICVENTHEYYYNKESDVPVAAKPDF*
Ga0075028_1001270302	3300006050	Watersheds	ITYGRGSSDWPETACAENIHEYYNNKDSDVPRADKPDF*
Ga0075019_102236273	3300006086	Watersheds	WTATMTYVLDSNEWREIVCAENLHEYYYNKDSDVPRADKPDF*
Ga0070765_1000393321	3300006176	Soil	FTMPWTATMTYIIDSNDWREVACAENRHEYYYGKESDVPRADRPDF*
Ga0070765_1019038561	3300006176	Soil	MPWTATITYGRGSDEWPETVCAENIHEYYNNKNSDVPQADKPDF*
Ga0075021_104079791	3300006354	Watersheds	WAATITYGRGTDRWPETVCAENTYEYYNNKHSDVPIADKPDF*
Ga0075021_109578501	3300006354	Watersheds	WSATITYRRAANEWRENVCAENMHEYYYNKEADVPTAAKPDF*
Ga0075021_110105561	3300006354	Watersheds	PWVATITYGRGSGDWDEQICAENRHEYYYDKDSAVPTADKPDF*
Ga0075021_110990041	3300006354	Watersheds	GPGSGEWEEIVCADNRHEYYNNKDSEVPTADKPDF*
Ga0066660_116416521	3300006800	Soil	QVHVTVEDEGAFTTPWSVTITYARGSNDWPETVCAENIHKYFDKDEDVPKADKPDF*
Ga0066710_1001978081	3300009012	Grasslands Soil	TLTTPWSATLTYGRGSDKWPETVCAENRNEYYNDKESEVPTALKSDF
Ga0066710_1025735331	3300009012	Grasslands Soil	GVFTKPWSATITYGRGDGQWDEQICAENRREYYYERDFEVPTSDKPDF
Ga0099828_110383122	3300009089	Vadose Zone Soil	SATITYGRSLIDWQEIVCPENRHEYYNNKESEVPRADKPDF*
Ga0126374_114919511	3300009792	Tropical Forest Soil	VFTMPWSATVTYGRGSTDWPETVCAENIQEYYNNKESDVPRADRPDF*
Ga0126370_105188911	3300010358	Tropical Forest Soil	DGVFTAPWSATITYGRGSGQWQEIICAENRHEYYNNKDSDVPTADKPDF*
Ga0126376_123373741	3300010359	Tropical Forest Soil	TYGRGSTDWPETVCAENIQEYYNNKESDVPRADRPDF*
Ga0126378_110276891	3300010361	Tropical Forest Soil	GTFTTPWSATITYGRGSGQWQEIVCAENRHEYYNNKDSDVPTANRSDF*
Ga0126377_118374742	3300010362	Tropical Forest Soil	SATITYGRGSTDWPETVCAENIQEYYNNKESDVPRADRPDF*
Ga0126381_1037619761	3300010376	Tropical Forest Soil	RGSGQWQEIICAENRHEYYNNKDSDVPTADKPDF*
Ga0126381_1049695801	3300010376	Tropical Forest Soil	SATITYGRGSGQWQEIVCAENRHEYYNNKDSDVPTANRSDF*
Ga0136449_1002912823	3300010379	Peatlands Soil	ITYGRGSDEWPETVCAENTHEYYNNKESEVPTAEKPDF*
Ga0136449_1015152141	3300010379	Peatlands Soil	WTATITYGRGTDEWPETVCAENIHEYYNNKNSEVPKADKADF*
Ga0136449_1024203811	3300010379	Peatlands Soil	VEDQGVFTTPWTATITYGRGAGDWPETVCAENIHEYYYNKNSEVPAAAKPDF*
Ga0136449_1029101541	3300010379	Peatlands Soil	TITYALDPAEWREVVCAENRHEYYSNKDSEVPTADKPDF*
Ga0126361_102691342	3300010876	Boreal Forest Soil	VHITVEDEGVFTTPWSATITYGPGSGEWIEIVCADNRREYYNNKDSDVPTADKPDF*
Ga0126350_118087391	3300010880	Boreal Forest Soil	DPAVFTAPWSATITYGRGSSDWPETACAENIHEYYNNKDSDVPRADKPDF*
Ga0137391_109419641	3300011270	Vadose Zone Soil	VEDEGVFTTPWSATITYGRGSTDWPETVCAENVHQYYRKDSEVPTADKPDF*
Ga0120134_10517983	3300012004	Permafrost	VFTMPWTATITYRPARDPWQETICAENTHEYYYNKESDVPTAVRPDF*
Ga0137389_103713503	3300012096	Vadose Zone Soil	HFTVEDEGVFAMPWSATITYRPALARWLENVCAENRQEYYNNKDSDVPTAVKPDF*
Ga0137383_107197961	3300012199	Vadose Zone Soil	TITYGRGSGQWQEIVCAENRHEYYNNKDSDVPTADKPDF*
Ga0137381_107174892	3300012207	Vadose Zone Soil	AGVFTMPWSATITYRRAANEWRENVCAENMHEYYYNKEAEVPTADKPDF*
Ga0137381_115010861	3300012207	Vadose Zone Soil	VTYGRSLIEWLEVVCAENRHEYYNNKESDVPRADKSDF*
Ga0137386_106274672	3300012351	Vadose Zone Soil	VTYGRSLIEWLEIVCAENRHEYYNNKESDVPKADKSDF*
Ga0137416_110118811	3300012927	Vadose Zone Soil	EGVFTMPWSATITYGPGSGEWEEIVCADNRHEYYNNKDSDVPTADKPDF*
Ga0181518_104618871	3300014156	Bog	WTATITYSPGSGEWREIACAENTHEYYYRKNSEVPHADRPDF*
Ga0182018_105657621	3300014489	Palsa	VEDEGAFMTPWTATITYALDPAEWREVVCAENRHEYYSNKDSEVPTADKPDF*
Ga0182024_103234521	3300014501	Permafrost	DPGVFTMPWTATITYGRGSDEWPETENRHEYYNNKESEVPTAEKPDF*
Ga0181522_109091912	3300014657	Bog	VEDPGVFTMPWTATITYGRGSDEWPEVVCAENTHEYYNNKDSEVPTAGKPDF*
Ga0182041_112111242	3300016294	Soil	YGRGSTEWPEIVCAENTHEYYNNKESEIPTAEKPDF
Ga0182035_109237801	3300016341	Soil	VFTAPWSATATYGRPLGAWAEHVCAANRREYYNNKASDVRTA
Ga0182032_101774501	3300016357	Soil	GRGSNEWPETVCAENIHEYYNNKNSDVPTAAKPDF
Ga0182034_100264085	3300016371	Soil	VHFTVEDEGVFTMPWSATITYGPGSGEWEEIVFADNRHEYYNNKDTEVPTASRPDF
Ga0182040_103523253	3300016387	Soil	FTVEDEGVFTTPWSATITFGRGTDQWPETVCAENIHQYYRKDSEVPTAGKPDF
Ga0187783_109816761	3300017970	Tropical Peatland	YGLATGELDEVVCAENRHEYYYNKDSDVPTAEEPDF
Ga0187782_109514351	3300017975	Tropical Peatland	TATVTFGRGTNEWSEIVCAENRREYYNDKDSEVPTADRPDF
Ga0187773_104750851	3300018064	Tropical Peatland	GVFTTPWQATVTYRPARVPWQEIVCAENTHEYYNNKDSDVPTAAKPDF
Ga0193751_10952644	3300019888	Soil	LFTVEDEGVFTTPWSATITFGRGTDQWPETVCAENIHQYYRKDSEVPTADKPDF
Ga0210406_109872712	3300021168	Soil	SATITYGRGSSDWPETACAENIHEYYNNKDSDVPRADKPDF
Ga0210408_109699132	3300021178	Soil	EDEGVFTMPWTATITYGRGTNEFPEIVCAENTHEYYNNRESSVPTANKPDF
Ga0213881_103144912	3300021374	Exposed Rock	KGVFTMPWTATMTYVLDSNGWREIVCAENRREYYYNKDSDVPRADKPDF
Ga0210387_101877243	3300021405	Soil	IYLTVEDEGVFTTPWSATITYGRDPEWAEVACAENRHEYYYNKDSDVPTADKPDF
Ga0210392_108486951	3300021475	Soil	TVEDEGVFTMPWSATITYGPGSGEWLEIVCADNRHEYYNNKDSEVPKADKPDF
Ga0210398_111101882	3300021477	Soil	TMPWSATITYGPGSGEWEEIACADNRHEYYNNKDTEVPTADKPDF
Ga0213853_104852501	3300021861	Watersheds	TMPWTATITYGRGSGAWEEIVCAENRHEYYYNKDSDVPTADKPDF
Ga0213853_105807861	3300021861	Watersheds	TTPWSATITYGRGSNEWPETVCAENIHEYYNNKDSDVPKAEKPDF
Ga0213853_106483972	3300021861	Watersheds	MPWSATITYGPGSGEWPEIVCAENRHEYYYNKESDVPRADKPDF
Ga0193698_10264162	3300021968	Soil	FTTPWTGTITYRPAPAPWQEIACAENTHEYYNNKESDVPMADRPDF
Ga0207657_114956342	3300025919	Corn Rhizosphere	YRRGATEWREHVCAENMHEYYNNKEVDVPTADKPDF
Ga0207700_102624504	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	GVFAMPWSATITYQPGTDEWVEIACADNRHEYYNNKDADVPRAEKPDF
Ga0257163_10506572	3300026359	Soil	GRGSTDWPETVCAENIHEYYNNKESDVPRADRPDF
Ga0209648_102589933	3300026551	Grasslands Soil	DGVFTMPWSATMTYRRALGQWPEFVCAENIHEYYNNKDSDVPTADKPDF
Ga0208994_10022911	3300027164	Forest Soil	SATITYGPGSGEWEEIACADNRHEYYSNKDSEVPTADKPDF
Ga0209579_100379851	3300027869	Surface Soil	TTPWKATVTYGRGSNEWPETVCAENRHEYYNNKESDVPTAKTPDF
Ga0209380_108822082	3300027889	Soil	WSVTITYGRDPEWAEIACAENRHEYYYNKDSDVPTADKPDF
Ga0209068_103344132	3300027894	Watersheds	PWAATITYGRGTDRWPETVCAENTYEYYNNKHSDVPIADKPDF
Ga0209068_108363072	3300027894	Watersheds	PWVATITYGRGSGDWDEQICAENRHEYYYDKDSAVPTADKPDF
Ga0209068_109319861	3300027894	Watersheds	VHFTVDDEGVFTIPWSATITYGPGSGEWEEIVCADNRHEYYNNKDSDVPTADKPDF
Ga0209488_104627511	3300027903	Vadose Zone Soil	PWTGTITYRPAPAPWQEIACAENTHEYYYNKESDVPVAAKPDF
Ga0209698_113361832	3300027911	Watersheds	PGVFTTPWTATITYGRGSNEWPETVCAENIHEYYNNKDSDVPRADKPDF
Ga0265338_110443351	3300028800	Rhizosphere	EFTVEDAGVFTMPWTATITYRRARNDWREAVCAENMHEYYYNKEVDVPTADKPDF
Ga0307305_104531102	3300028807	Soil	MPWSATITYRRGVGPWREYICAENRQEYYNNKESDVPTAHKPDF
Ga0308309_102032983	3300028906	Soil	LTFTVEDPAVFTMPWSATITYGRGSSDWPETACAENIHEYYNNKDSDVPRADKPDF
Ga0222749_102058662	3300029636	Soil	GVFTMPWSATITYGRGSNDWPETACAENIHEYYNNKDSDVPRADKPDF
Ga0222749_105002852	3300029636	Soil	SATITYQPGTDEWVEIACADNRHEYYNNKDSDVPTADKPDF
Ga0311352_109468081	3300029944	Palsa	GRGSNEWPETVCAENIHQYYFHKDSEVPTADRPDF
Ga0306917_102233961	3300031719	Soil	GVFTMPWSATITYGPGSGEWEEIVCADNRHEYYNNKDSEVPTADRPDF
Ga0306917_113759301	3300031719	Soil	FTTPWTATMTYVLDSNEWREIVCAENLHEYYYNKDSDVPRADKPDF
Ga0306918_102915051	3300031744	Soil	WSATITYGPGSGEWEEIVCADNRHEYYNNKDTEVPTASRPDF
Ga0306918_114423811	3300031744	Soil	EGVFTTPWSATITFGRGTDQWPETVCAENIHQYYRKDSEVPTADKPDF
Ga0318509_101754561	3300031768	Soil	VFTMPWSATITYGPGSGEWEEIVCADNRHEYYNNKDTEVPTASRPDF
Ga0318546_101977621	3300031771	Soil	GLASGEFEEVVCAENRHEYYYNKYSEVPTADKPDF
Ga0318552_103115161	3300031782	Soil	YRRGFNWRGSEEWPEVVCAENIHEYYALKDSQVPQAAKPDF
Ga0318517_104841611	3300031835	Soil	YGLASGELDEVVCAENRHEYYYNKDSDVPTAEKPDF
Ga0318512_105173233	3300031846	Soil	VFTAPWSATATYGRPLGAWAEHVCAENRREYYNNKDSDVPTALRPDF
Ga0306919_115103032	3300031879	Soil	VEDEGAFTMPWSATITYGRGSGKWQEIVCAENPHVYYDKDTNVPTAERPDF
Ga0306923_102926523	3300031910	Soil	ATITYGRGSNEWPETVCAENIHEYYNNKNSDVPTAAKPDF
Ga0306923_113742782	3300031910	Soil	TMTYVLDSNEWRETVCAENLHEYYYNKDSDVPRADKPDF
Ga0306921_126769611	3300031912	Soil	VFTTPWTATITYGRGSNEWPETVCAENIHEYYNNKNSDVPTAAKPDF
Ga0310912_102655723	3300031941	Soil	QLLFTVEDEGVFTMPWSATITFGRGTDQWPETVCAENIHQYYRKDSEVPTADKPDF
Ga0310912_104222212	3300031941	Soil	ITYGPGSGEWEEIVCADNRHEYYNNKDTEVPTASRPDF
Ga0310912_114674911	3300031941	Soil	TVEDEGVFTMPWSATITYGPGSGEWEEIVCADNRHEYYNNKDSEVPTADRPDF
Ga0310916_111159412	3300031942	Soil	TATVTYARDSREWPEIACAENIREYYYNKDSEVPRADKPDF
Ga0310913_113144151	3300031945	Soil	TTPWTATMTYVLDSNEWREIVCAENLHEYYYNKDSDVPRADKPDF
Ga0306922_118880412	3300032001	Soil	PWSATITYGPGSGEWEEIVCADNRHEYYNNKDSEVPTAEKPDF
Ga0318510_103847582	3300032064	Soil	ATITYGPGSGEWEEIVCADNRHEYYNNKDTEVPTASRPDF
Ga0318514_107775491	3300032066	Soil	PWSATITYGRGSGKWQEIVCAENPHVYYDKDTNVPTAERPDF
Ga0318540_100873761	3300032094	Soil	FTVEDEGVFTTPWSATITFGRGTDQWPETVCAENIHQYYRKDSEVPTADKPDF
Ga0316053_1070962	3300032120	Soil	TATVTYARDSREWPEIVCAENIHEYYYNKESEVPHADRPDF
Ga0315912_114558312	3300032157	Soil	QVILTMEDEGVFTTPFGATVTFGRGTSDWPETVCAENTHEYYANKDSEVPAANAPDF
Ga0306920_1035233671	3300032261	Soil	FTMPWSATITYGPGSGEWEEIVCADNRHEYYNNKDTEVPTASRPDF
Ga0348332_147281981	3300032515	Plant Litter	EDKGAFTTPWTATVTYARDSREWSEIVCAENIQEYYSSKESEVPRGGKPDF
Ga0310914_115633652	3300033289	Soil	QITVEDNGVFTAPWSATATYGRPLGAWAEHVCAENRREYYNNKDSDVPTALRPDF
Ga0314867_122460_2_151	3300033808	Peatland	DGVFTTPWSATITYGRGSGQWQEIICAENIREYYNNKDSDVPRADKPDF

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.20
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.20
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F076317

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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