Metagenome / Metatranscriptome Family F076253

Basic Information
Family ID	F076253
Family Type	Metagenome / Metatranscriptome
Number of Sequences	118
Average Sequence Length	39 residues
Representative Sequence	MTTVEFITALFYEVDEQLRAIPKHPEAHLWPSEVV
Number of Associated Samples	96
Number of Associated Scaffolds	118

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	87.93 %
% of genes near scaffold ends (potentially truncated)	81.36 %
% of genes from short scaffolds (< 2000 bps)	93.22 %
Associated GOLD sequencing projects	92
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.44

Most Common Taxonomy
Group	Unclassified (56.780 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (29.661 % of family members)
Environment Ontology (ENVO)	Unclassified (40.678 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (46.610 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 31.75% β-sheet: 0.00% Coil/Unstructured: 68.25%
Feature Viewer

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Pfam ID	Name	% Frequency in 118 Family Scaffolds
PF13450	NAD_binding_8	1.69
PF00873	ACR_tran	0.85
PF14417	MEDS	0.85
PF12680	SnoaL_2	0.85
PF08497	Radical_SAM_N	0.85
PF14104	DUF4277	0.85
PF02028	BCCT	0.85
PF03050	DDE_Tnp_IS66	0.85
PF04966	OprB	0.85
PF01656	CbiA	0.85
PF13565	HTH_32	0.85
PF13714	PEP_mutase	0.85
PF00589	Phage_integrase	0.85
PF13744	HTH_37	0.85
PF00355	Rieske	0.85
PF07592	DDE_Tnp_ISAZ013	0.85
PF13551	HTH_29	0.85
PF00239	Resolvase	0.85
PF13613	HTH_Tnp_4	0.85
PF06751	EutB	0.85
PF13358	DDE_3	0.85
PF01610	DDE_Tnp_ISL3	0.85
PF02629	CoA_binding	0.85
PF02810	SEC-C	0.85
PF13340	DUF4096	0.85
PF02416	TatA_B_E	0.85
PF12778	PXPV	0.85
PF01797	Y1_Tnp	0.85
PF01179	Cu_amine_oxid	0.85
PF01425	Amidase	0.85
PF13365	Trypsin_2	0.85
PF04892	VanZ	0.85
PF00561	Abhydrolase_1	0.85

COG ID	Name	Functional Category	% Frequency in 118 Family Scaffolds
COG0154	Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit or related amidase	Translation, ribosomal structure and biogenesis [J]	0.85
COG1032	Radical SAM superfamily enzyme YgiQ, UPF0313 family	General function prediction only [R]	0.85
COG1292	Choline-glycine betaine transporter	Cell wall/membrane/envelope biogenesis [M]	0.85
COG1826	Twin-arginine protein secretion pathway components TatA and TatB	Intracellular trafficking, secretion, and vesicular transport [U]	0.85
COG1943	REP element-mobilizing transposase RayT	Mobilome: prophages, transposons [X]	0.85
COG1961	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	Replication, recombination and repair [L]	0.85
COG2452	Predicted site-specific integrase-resolvase	Mobilome: prophages, transposons [X]	0.85
COG3436	Transposase	Mobilome: prophages, transposons [X]	0.85
COG3464	Transposase	Mobilome: prophages, transposons [X]	0.85
COG3659	Carbohydrate-selective porin OprB	Cell wall/membrane/envelope biogenesis [M]	0.85
COG3733	Cu2+-containing amine oxidase	Secondary metabolites biosynthesis, transport and catabolism [Q]	0.85
COG4303	Ethanolamine ammonia-lyase, large subunit	Amino acid transport and metabolism [E]	0.85

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	56.78 %
All Organisms	root	All Organisms	43.22 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	56.78 %
cellular organisms	root	All Organisms → cellular organisms	43.22 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	56.78 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	43.22 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	56.78 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	8.47 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	6.78 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	4.24 %
Nitrospinae/Tectomicrobia group	clade	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group	1.69 %
unclassified Bacteria	no rank	All Organisms → cellular organisms → Bacteria → unclassified Bacteria	1.69 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	0.85 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	56.78 %
Cyanobacteria/Melainabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group	4.24 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	3.39 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	2.54 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2.54 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	2.54 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	1.69 %
Candidatus Tectomicrobia	phylum	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia	1.69 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1.69 %
Bacteroidetes/Chlorobi group	clade	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group	0.85 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.85 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.85 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	0.85 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	56.78 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	4.24 %
Candidatus Acidoferrales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales	3.39 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	2.54 %
Actinomycetota incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetota incertae sedis	1.69 %
Candidatus Entotheonella	genus	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia → Candidatus Entotheonella	1.69 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	1.69 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.85 %
Acidiferrobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Acidiferrobacterales	0.85 %
Alteromonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Alteromonadales	0.85 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	0.85 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	0.85 %
unclassified Chloroflexi	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi	0.85 %
Planctomycetia	class	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia	0.85 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	56.78 %
Candidatus Acidoferrum	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum	3.39 %
unclassified Cyanobacteria	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria	2.54 %
unclassified Deltaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria	1.69 %
Candidatus Hakubanella	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetota incertae sedis → Candidatus Hakubanella	1.69 %
Candidatus Entotheonella	genus	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia → Candidatus Entotheonella	1.69 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	1.69 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.85 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.85 %
Acidiferrobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Acidiferrobacterales → Acidiferrobacteraceae	0.85 %
Bacteroidetes Order II. Incertae sedis	order	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidetes Order II. Incertae sedis	0.85 %
Pseudoalteromonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Alteromonadales → Pseudoalteromonadaceae	0.85 %
Desulfobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales	0.85 %
Planctomycetales	order	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales	0.85 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.85 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	56.78 %
Candidatus Acidoferrum panamensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	3.39 %
Cyanobacteria bacterium 13_1_20CM_4_61_6	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_20CM_4_61_6	1.69 %
Candidatus Hakubanella thermoalkaliphilus	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetota incertae sedis → Candidatus Hakubanella → Candidatus Hakubanella thermoalkaliphilus	1.69 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1.69 %
Candidatus Entotheonella	genus	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia → Candidatus Entotheonella	1.69 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	1.69 %
Cyanobacteria bacterium 13_1_40CM_2_61_4	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_40CM_2_61_4	0.85 %
unclassified Acidiferrobacteraceae	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Acidiferrobacterales → Acidiferrobacteraceae → unclassified Acidiferrobacteraceae	0.85 %
Rhodothermaceae	family	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidetes Order II. Incertae sedis → Rhodothermaceae	0.85 %
Algicola	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Alteromonadales → Pseudoalteromonadaceae → Algicola	0.85 %
Desulfobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae	0.85 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.85 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.85 %
Planctomycetales	order	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales	0.85 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.85 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	56.78 %
Candidatus Acidoferrum panamensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	3.39 %
Cyanobacteria bacterium 13_1_20CM_4_61_6	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_20CM_4_61_6	1.69 %
Candidatus Hakubanella thermoalkaliphilus	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetota incertae sedis → Candidatus Hakubanella → Candidatus Hakubanella thermoalkaliphilus	1.69 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1.69 %
Candidatus Entotheonella	genus	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia → Candidatus Entotheonella	1.69 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	1.69 %
Acidiferrobacteraceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Acidiferrobacterales → Acidiferrobacteraceae → unclassified Acidiferrobacteraceae → Acidiferrobacteraceae bacterium	0.85 %
Rhodothermus	genus	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidetes Order II. Incertae sedis → Rhodothermaceae → Rhodothermus	0.85 %
Desulfobacula	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae → Desulfobacula	0.85 %
Algicola sagamiensis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Alteromonadales → Pseudoalteromonadaceae → Algicola → Algicola sagamiensis	0.85 %
Cyanobacteria bacterium 13_1_40CM_2_61_4	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_40CM_2_61_4	0.85 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.85 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.85 %
Planctomycetales	order	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales	0.85 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.85 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	56.78 %
Candidatus Acidoferrum panamensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	3.39 %
Cyanobacteria bacterium 13_1_20CM_4_61_6	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_20CM_4_61_6	1.69 %
Candidatus Hakubanella thermoalkaliphilus	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetota incertae sedis → Candidatus Hakubanella → Candidatus Hakubanella thermoalkaliphilus	1.69 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1.69 %
Candidatus Entotheonella	genus	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia → Candidatus Entotheonella	1.69 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	1.69 %
Rhodothermus marinus	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidetes Order II. Incertae sedis → Rhodothermaceae → Rhodothermus → Rhodothermus marinus	0.85 %
Desulfobacula toluolica	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae → Desulfobacula → Desulfobacula toluolica	0.85 %
Acidiferrobacteraceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Acidiferrobacterales → Acidiferrobacteraceae → unclassified Acidiferrobacteraceae → Acidiferrobacteraceae bacterium	0.85 %
Algicola sagamiensis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Alteromonadales → Pseudoalteromonadaceae → Algicola → Algicola sagamiensis	0.85 %
Cyanobacteria bacterium 13_1_40CM_2_61_4	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_40CM_2_61_4	0.85 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.85 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.85 %
Planctomycetales	order	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales	0.85 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.85 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.85 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000890\|JGI11643J12802_12034892	All Organisms → cellular organisms → Bacteria	613	Open in IMG/M
3300005294\|Ga0065705_10174064	All Organisms → cellular organisms → Bacteria	1645	Open in IMG/M
3300005569\|Ga0066705_10116271	All Organisms → cellular organisms → Bacteria	1608	Open in IMG/M
3300005764\|Ga0066903_104668259	Not Available	729	Open in IMG/M
3300005842\|Ga0068858_102543455	All Organisms → cellular organisms → Bacteria	506	Open in IMG/M
3300005843\|Ga0068860_102485896	Not Available	538	Open in IMG/M
3300006194\|Ga0075427_10067161	Not Available	635	Open in IMG/M
3300007076\|Ga0075435_100991295	Not Available	734	Open in IMG/M
3300009012\|Ga0066710_101016120	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia → Candidatus Entotheonella	1280	Open in IMG/M
3300009012\|Ga0066710_102000228	Not Available	859	Open in IMG/M
3300009012\|Ga0066710_104616856	Not Available	515	Open in IMG/M
3300009038\|Ga0099829_11564537	All Organisms → cellular organisms → Bacteria	544	Open in IMG/M
3300009089\|Ga0099828_10180586	Not Available	1877	Open in IMG/M
3300009089\|Ga0099828_11985964	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	509	Open in IMG/M
3300009137\|Ga0066709_101418415	Not Available	1008	Open in IMG/M
3300009147\|Ga0114129_10850749	All Organisms → cellular organisms → Bacteria	1160	Open in IMG/M
3300009553\|Ga0105249_10945655	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	930	Open in IMG/M
3300009553\|Ga0105249_11373366	All Organisms → cellular organisms → Bacteria	778	Open in IMG/M
3300009553\|Ga0105249_12429978	Not Available	596	Open in IMG/M
3300009812\|Ga0105067_1010571	Not Available	1174	Open in IMG/M
3300010042\|Ga0126314_11173316	Not Available	573	Open in IMG/M
3300010047\|Ga0126382_11058640	All Organisms → cellular organisms → Bacteria	716	Open in IMG/M
3300010048\|Ga0126373_12511686	Not Available	574	Open in IMG/M
3300010358\|Ga0126370_11518684	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidetes Order II. Incertae sedis → Rhodothermaceae → Rhodothermus → Rhodothermus marinus	637	Open in IMG/M
3300010358\|Ga0126370_11675656	Not Available	611	Open in IMG/M
3300010358\|Ga0126370_11689401	Not Available	609	Open in IMG/M
3300010359\|Ga0126376_10639231	Not Available	1013	Open in IMG/M
3300010359\|Ga0126376_10680575	Not Available	986	Open in IMG/M
3300010360\|Ga0126372_10556518	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Alteromonadales → Pseudoalteromonadaceae → Algicola → Algicola sagamiensis	1091	Open in IMG/M
3300010366\|Ga0126379_11541592	Not Available	770	Open in IMG/M
3300010397\|Ga0134124_11412426	Not Available	722	Open in IMG/M
3300010398\|Ga0126383_12888308	Not Available	561	Open in IMG/M
3300010399\|Ga0134127_11799418	Not Available	689	Open in IMG/M
3300011269\|Ga0137392_11121525	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	644	Open in IMG/M
3300011270\|Ga0137391_11387881	Not Available	549	Open in IMG/M
3300012199\|Ga0137383_10637014	All Organisms → cellular organisms → Bacteria	779	Open in IMG/M
3300012201\|Ga0137365_10287643	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1219	Open in IMG/M
3300012201\|Ga0137365_10696529	All Organisms → cellular organisms → Bacteria	743	Open in IMG/M
3300012201\|Ga0137365_11272880	Not Available	523	Open in IMG/M
3300012202\|Ga0137363_10513721	All Organisms → cellular organisms → Bacteria	1007	Open in IMG/M
3300012202\|Ga0137363_11436873	Not Available	580	Open in IMG/M
3300012203\|Ga0137399_10431280	Not Available	1101	Open in IMG/M
3300012204\|Ga0137374_10164401	Not Available	1961	Open in IMG/M
3300012207\|Ga0137381_10602781	Not Available	957	Open in IMG/M
3300012209\|Ga0137379_10188565	All Organisms → cellular organisms → Bacteria	1975	Open in IMG/M
3300012211\|Ga0137377_10324499	Not Available	1475	Open in IMG/M
3300012356\|Ga0137371_10615140	All Organisms → cellular organisms → Bacteria	834	Open in IMG/M
3300012361\|Ga0137360_10858321	Not Available	782	Open in IMG/M
3300012362\|Ga0137361_10098821	Not Available	2534	Open in IMG/M
3300012362\|Ga0137361_10755974	All Organisms → cellular organisms → Bacteria	886	Open in IMG/M
3300012362\|Ga0137361_11235929	Not Available	670	Open in IMG/M
3300012399\|Ga0134061_1139337	Not Available	633	Open in IMG/M
3300012582\|Ga0137358_10300820	Not Available	1089	Open in IMG/M
3300012922\|Ga0137394_10669904	Not Available	875	Open in IMG/M
3300012925\|Ga0137419_10046226	All Organisms → cellular organisms → Bacteria	2781	Open in IMG/M
3300012929\|Ga0137404_10100280	All Organisms → cellular organisms → Bacteria	2335	Open in IMG/M
3300012929\|Ga0137404_11534390	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	617	Open in IMG/M
3300012948\|Ga0126375_10986212	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_20CM_4_61_6	685	Open in IMG/M
3300012971\|Ga0126369_10343995	Not Available	1511	Open in IMG/M
3300012971\|Ga0126369_11320492	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	811	Open in IMG/M
3300012972\|Ga0134077_10306107	Not Available	668	Open in IMG/M
3300015264\|Ga0137403_10225646	All Organisms → cellular organisms → Bacteria	1794	Open in IMG/M
3300015371\|Ga0132258_13681452	Not Available	1046	Open in IMG/M
3300015372\|Ga0132256_102952605	Not Available	572	Open in IMG/M
3300016422\|Ga0182039_11371031	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	642	Open in IMG/M
3300017792\|Ga0163161_11710516	Not Available	557	Open in IMG/M
3300017965\|Ga0190266_10483229	Not Available	716	Open in IMG/M
3300018052\|Ga0184638_1297025	Not Available	547	Open in IMG/M
3300018078\|Ga0184612_10548829	Not Available	556	Open in IMG/M
3300018433\|Ga0066667_10424868	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1080	Open in IMG/M
3300019259\|Ga0184646_1281475	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Acidiferrobacterales → Acidiferrobacteraceae → unclassified Acidiferrobacteraceae → Acidiferrobacteraceae bacterium	641	Open in IMG/M
3300020170\|Ga0179594_10031061	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales	1706	Open in IMG/M
3300025923\|Ga0207681_11013743	All Organisms → cellular organisms → Bacteria	697	Open in IMG/M
3300025927\|Ga0207687_11204766	Not Available	651	Open in IMG/M
3300025932\|Ga0207690_11443348	All Organisms → cellular organisms → Bacteria	575	Open in IMG/M
3300025961\|Ga0207712_10856215	All Organisms → cellular organisms → Bacteria	801	Open in IMG/M
3300026121\|Ga0207683_10857658	Not Available	843	Open in IMG/M
3300026536\|Ga0209058_1144784	Not Available	1130	Open in IMG/M
3300027056\|Ga0209879_1072527	Not Available	544	Open in IMG/M
3300027511\|Ga0209843_1093722	Not Available	508	Open in IMG/M
3300027643\|Ga0209076_1221068	Not Available	515	Open in IMG/M
3300027654\|Ga0209799_1002962	Not Available	3435	Open in IMG/M
3300027654\|Ga0209799_1017934	All Organisms → cellular organisms → Bacteria	1547	Open in IMG/M
3300027846\|Ga0209180_10087085	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1768	Open in IMG/M
3300027846\|Ga0209180_10403484	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	774	Open in IMG/M
3300027873\|Ga0209814_10275895	Not Available	730	Open in IMG/M
3300027874\|Ga0209465_10155233	Not Available	1137	Open in IMG/M
3300027882\|Ga0209590_10028329	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae → Desulfobacula → Desulfobacula toluolica	2926	Open in IMG/M
3300027882\|Ga0209590_10209248	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia → Candidatus Entotheonella	1235	Open in IMG/M
3300027882\|Ga0209590_10777266	Not Available	609	Open in IMG/M
3300027882\|Ga0209590_10800400	Not Available	599	Open in IMG/M
3300027907\|Ga0207428_10141097	All Organisms → cellular organisms → Bacteria	1839	Open in IMG/M
3300031094\|Ga0308199_1001708	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	2416	Open in IMG/M
3300031226\|Ga0307497_10517906	Not Available	591	Open in IMG/M
3300031547\|Ga0310887_11027067	Not Available	527	Open in IMG/M
3300031640\|Ga0318555_10564653	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	617	Open in IMG/M
3300031681\|Ga0318572_10265203	Not Available	1011	Open in IMG/M
3300031736\|Ga0318501_10271993	Not Available	900	Open in IMG/M
3300031740\|Ga0307468_100750946	Not Available	824	Open in IMG/M
3300031763\|Ga0318537_10042097	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetota incertae sedis → Candidatus Hakubanella → Candidatus Hakubanella thermoalkaliphilus	1646	Open in IMG/M
3300031770\|Ga0318521_10871989	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_20CM_4_61_6	550	Open in IMG/M
3300031771\|Ga0318546_10991339	Not Available	591	Open in IMG/M
3300031798\|Ga0318523_10478040	Not Available	617	Open in IMG/M
3300031805\|Ga0318497_10120129	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetota incertae sedis → Candidatus Hakubanella → Candidatus Hakubanella thermoalkaliphilus	1422	Open in IMG/M
3300031896\|Ga0318551_10789954	Not Available	552	Open in IMG/M
3300031910\|Ga0306923_12102496	Not Available	570	Open in IMG/M
3300031946\|Ga0310910_10244299	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	1402	Open in IMG/M
3300031954\|Ga0306926_12155269	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	622	Open in IMG/M
3300031954\|Ga0306926_12778864	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	529	Open in IMG/M
3300032000\|Ga0310903_10225195	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	890	Open in IMG/M
3300032002\|Ga0307416_100307559	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_40CM_2_61_4	1579	Open in IMG/M
3300032174\|Ga0307470_10814517	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	725	Open in IMG/M
3300032261\|Ga0306920_101756880	Not Available	877	Open in IMG/M
3300033289\|Ga0310914_11645114	Not Available	546	Open in IMG/M
3300034643\|Ga0370545_005079	Not Available	1749	Open in IMG/M
3300034673\|Ga0314798_109870	Not Available	592	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	83.90%
Host-Associated	Host-Associated	16.10%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	81.36%
Plants	Host-Associated → Plants	16.10%
Aquatic	Environmental → Aquatic	2.54%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	81.36%
Rhizosphere	Host-Associated → Plants → Rhizosphere	11.86%
Rhizoplane	Host-Associated → Plants → Rhizoplane	4.24%
Sediment	Environmental → Aquatic → Sediment	1.69%
Freshwater	Environmental → Aquatic → Freshwater	0.85%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	75.42%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	9.32%
Loam	Environmental → Terrestrial → Soil → Loam	3.39%
Sand	Environmental → Terrestrial → Soil → Sand	2.54%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	2.54%
Soil	Host-Associated → Plants → Rhizosphere → Soil	2.54%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.69%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.85%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.85%
Soil	Host-Associated → Plants → Rhizoplane → Soil	0.85%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	50.00%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	16.10%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	9.32%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	6.78%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	3.39%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	2.54%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	2.54%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	2.54%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	2.54%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.69%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.85%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.85%
Unclassified	Host-Associated → Plants → Rhizoplane → Soil → Unclassified	0.85%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	29.66%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	11.86%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	10.17%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	4.24%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	4.24%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	4.24%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	3.39%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	3.39%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	3.39%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	2.54%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	2.54%
Groundwater Sand	Environmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand	2.54%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	1.69%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.69%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	1.69%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.69%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.69%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	0.85%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	0.85%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere	0.85%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.85%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.85%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere	0.85%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.85%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.85%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.85%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.85%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.85%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000890	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300005294	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk Soil	Environmental	Open in IMG/M
3300005569	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_154	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005842	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2	Host-Associated	Open in IMG/M
3300005843	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2	Host-Associated	Open in IMG/M
3300006194	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1	Host-Associated	Open in IMG/M
3300007076	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4	Host-Associated	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300009812	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N2_50_60	Environmental	Open in IMG/M
3300010042	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105B	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010397	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental	Open in IMG/M
3300011270	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaG	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012201	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012204	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_100_16 metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012356	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012399	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_5_24_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012582	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaG	Environmental	Open in IMG/M
3300012922	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaG	Environmental	Open in IMG/M
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300012972	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300015264	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300017792	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG	Host-Associated	Open in IMG/M
3300017965	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 220 T	Environmental	Open in IMG/M
3300018052	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_50_b2	Environmental	Open in IMG/M
3300018078	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_60_coex	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300019259	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_100 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300020170	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad1_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300025923	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025927	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025932	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025961	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026121	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026536	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147 (SPAdes)	Environmental	Open in IMG/M
3300027056	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N3_20_30 (SPAdes)	Environmental	Open in IMG/M
3300027511	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S1_20_30 (SPAdes)	Environmental	Open in IMG/M
3300027643	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3 (SPAdes)	Environmental	Open in IMG/M
3300027654	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 MoBio (SPAdes)	Environmental	Open in IMG/M
3300027846	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027873	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1 (SPAdes)	Host-Associated	Open in IMG/M
3300027874	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio (SPAdes)	Environmental	Open in IMG/M
3300027882	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027907	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes)	Host-Associated	Open in IMG/M
3300031094	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_203 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031226	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 10_S	Environmental	Open in IMG/M
3300031547	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D4	Environmental	Open in IMG/M
3300031640	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f23	Environmental	Open in IMG/M
3300031681	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f20	Environmental	Open in IMG/M
3300031736	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f21	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300031763	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f29	Environmental	Open in IMG/M
3300031770	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f17	Environmental	Open in IMG/M
3300031771	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19	Environmental	Open in IMG/M
3300031798	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f19	Environmental	Open in IMG/M
3300031805	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f23	Environmental	Open in IMG/M
3300031896	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f19	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300032000	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D3	Environmental	Open in IMG/M
3300032002	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3	Host-Associated	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M
3300034643	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_120 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300034673	Metatranscriptome of lab incibated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24R3 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M

Geographical Distribution

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Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.44
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.44
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F076253

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI11643J12802_120348921	3300000890	Soil	MITVEFITALFSEVDEQLGAIPKHPEAHLWPSEVVTL
Ga0065705_101740641	3300005294	Switchgrass Rhizosphere	MITVEFITALFYEVDEQLHAIPKHPEAHLWPSDAVTLGLLHALKG
Ga0066705_101162711	3300005569	Soil	MITMDFITALFYEVDEQLGAIPKHPEAHLWPSEVV
Ga0066903_1046682593	3300005764	Tropical Forest Soil	MMTVEFITALFYEVDEQLGAIPKHPEAHLWPSEVV
Ga0068858_1025434552	3300005842	Switchgrass Rhizosphere	MTTEELITALFYEVDEQLHAIPKHPEAHLWPSEVV
Ga0068860_1024858962	3300005843	Switchgrass Rhizosphere	MTTTIEFITALFCQVADQIPDIPKHPQASLWPSEVV
Ga0075427_100671611	3300006194	Populus Rhizosphere	VITVEFITALFYEVDEQMRAIPKHPEAHLWPSEVVT
Ga0075435_1009912952	3300007076	Populus Rhizosphere	MITVDFITALFYEVDEQIGAIPTHPEAHLWPSAVVTLGLLHALTVP*
Ga0066710_1010161201	3300009012	Grasslands Soil	MITVEFITALFSEVDEQLRTIPKHPEAHLWPSEVV
Ga0066710_1020002281	3300009012	Grasslands Soil	LPTAEFITALFCEVDELIGVIPKHPEANLWPSEVGPSG
Ga0066710_1046168561	3300009012	Grasslands Soil	MTTTIDFITALFYEVDEQMGTIPKHPEAHLWPSEV
Ga0099829_115645371	3300009038	Vadose Zone Soil	MTTVDFITALFYEVDEQLGAIPKHPEAHLWPSEVV
Ga0099828_101805861	3300009089	Vadose Zone Soil	MTTVDFITALFYEIDEQLRAIPKHPAAHLWPSEVITLGLL
Ga0099828_119859642	3300009089	Vadose Zone Soil	MTTLDFITALFSEVDDQMRDMPKHPDARLWPSEVV
Ga0066709_1014184151	3300009137	Grasslands Soil	MTTVDCITALFYEVDEQLRALPKHPEARLWPSEVATLGLLHALKGEGN
Ga0114129_108507492	3300009147	Populus Rhizosphere	MIPLDFLTALFYEVEEQLRTIPKPPEAHLWPSAVGTLGLLHALQGVGHRPF*
Ga0105249_109456552	3300009553	Switchgrass Rhizosphere	MITVEFITALFSEVDEQLGAIPKHPEAHLWPSEVLTLGLL
Ga0105249_113733662	3300009553	Switchgrass Rhizosphere	MTTVDFITALFYEVDEQLRAIPKHPEAHLWPSAVVTLGLLHALKGVG
Ga0105249_124299781	3300009553	Switchgrass Rhizosphere	MTTTIEFITALFYHVDEKLHAIPKHPEAHLWPSEV
Ga0105067_10105712	3300009812	Groundwater Sand	MTTVDFITALFYEVDEQMGAIPKHPEAHLWASPVHRRNFVR*
Ga0126314_111733161	3300010042	Serpentine Soil	MSTLNLITALFYEVDEQLGALPTPPEAPLWPREVITLGLLQALTGGGNRA
Ga0126382_110586401	3300010047	Tropical Forest Soil	MTTTVEFITALFYEVDEQLGAIPKHPEAHLWPSEV
Ga0126373_125116862	3300010048	Tropical Forest Soil	MTTEELITALFYEVDEQLHAIPKHPEAHLWPSEVVSLGLLHALTVP*
Ga0126370_115186841	3300010358	Tropical Forest Soil	MTTEELITALCYEVDEQLHAIPKHPEAHLWPSEVVTLG
Ga0126370_116756561	3300010358	Tropical Forest Soil	MTTIEFITALFCQVDDQLAGFPKHPEAHLWPREVV
Ga0126370_116894012	3300010358	Tropical Forest Soil	MMTVELITALFYEVDEQLRAIPKHPEAHLWPSEVV
Ga0126376_106392312	3300010359	Tropical Forest Soil	MMTVEFITALFYEVDEQLGAIPKHPEAHLWPSEVVT
Ga0126376_106805751	3300010359	Tropical Forest Soil	MTTTIEFITALFYEVDEQLGAIPKHPEAHLWPSEVV
Ga0126372_105565182	3300010360	Tropical Forest Soil	MMTVEVITALFEEVAEQIGASPTHPEAHLWPSEVGRSGLGGR*
Ga0126379_115415921	3300010366	Tropical Forest Soil	MMTVEFITALFYEVDEQIGAIPKHPEAHLWPSEVV
Ga0134124_114124261	3300010397	Terrestrial Soil	GVEEPMTTTSDFITALFCQVDDHLAGLLKHPEAHLWPSAVVTLGLLHALTVP*
Ga0126383_128883081	3300010398	Tropical Forest Soil	MTTVELITALFYEVDEQLHAIPKHPEAHLWPSEVV
Ga0134127_117994182	3300010399	Terrestrial Soil	MTTVEFITALFYEVDEQLRAIPKHPEAHLWPSEVLTLGLLHALTVP*
Ga0137392_111215251	3300011269	Vadose Zone Soil	MITVEFITALFYEVDEQLHTIPKHPEAHLWPSEVV
Ga0137391_113878811	3300011270	Vadose Zone Soil	ESCMITVEFITALFYEVDEQLPAIPKHPEAHLWQ*
Ga0137383_106370142	3300012199	Vadose Zone Soil	MTIVEFIAALFYEVDEQLRTMPKHPEAHLWPSEVV
Ga0137365_102876431	3300012201	Vadose Zone Soil	MEEPMTTVEFITALFHHVDEPMRAMPKHPEARLWPSEV
Ga0137365_106965293	3300012201	Vadose Zone Soil	MMTVEFITALFYEVDEQLRAIPKHPEAHLWPSEVV
Ga0137365_112728801	3300012201	Vadose Zone Soil	MTTTIDFITALFYEVDEQMGAIPKHPEAHLWPSEVV
Ga0137363_105137211	3300012202	Vadose Zone Soil	MTTVDVITALFYEVDEQLRTIPKHPEAHLWPSAVVTLGLLHALKGV
Ga0137363_114368731	3300012202	Vadose Zone Soil	VSTIEFITALFYEVDEQLGAIPKHPEAHLWPSEVV
Ga0137399_104312801	3300012203	Vadose Zone Soil	MTTVDFITALFSEVDEQLHAIPKHPEAPLWPSEVLTLGLLHALKG
Ga0137374_101644013	3300012204	Vadose Zone Soil	MTTVDFITALFYEVDEQMGAIPKHPEAHLWPSEVV
Ga0137381_106027813	3300012207	Vadose Zone Soil	ALFCQVDDQLSGLPKHPEAHLWPSEVVTLVRTHV*
Ga0137379_101885653	3300012209	Vadose Zone Soil	MTTVEFITALFYEVDEQLRAIPKHPEAHLWPSEVV
Ga0137377_103244993	3300012211	Vadose Zone Soil	MTTVEFITALFCEVDAQLHTIPKHPEAHLWPSEVGTLGL
Ga0137371_106151401	3300012356	Vadose Zone Soil	MTTVDFITALFYEVDAQMRALPKHPEARLWPSEVV
Ga0137360_108583212	3300012361	Vadose Zone Soil	MITVDCITALFYEVDEQMGAIPKHPKAHLWPSEVGTLGLLHARTVP*
Ga0137361_100988211	3300012362	Vadose Zone Soil	MTTLDFITAFFYEVDEQLRAIPQHPEAHLWPSEIVTLGLLH
Ga0137361_107559742	3300012362	Vadose Zone Soil	MSTVELITALFFEVDEQIGAIRKQPEGHLWPSEVVTLGLV
Ga0137361_112359291	3300012362	Vadose Zone Soil	MITIDFITALFYQVDEQMGAIPKHPEAHLWPSDVVT
Ga0134061_11393372	3300012399	Grasslands Soil	MTTVEFITALFYEVDEQLRTIPKHPEAHLWPSEVGTLGLLHALTVP*
Ga0137358_103008202	3300012582	Vadose Zone Soil	MTTTIEFITALFYHVDEKLHAIPKHPEAHLWPSEVGTLGLLHALTVP*
Ga0137394_106699041	3300012922	Vadose Zone Soil	MTTLDFITALFYEVDEQLRAIPKHPEAHLWPSEIVTLG
Ga0137419_100462261	3300012925	Vadose Zone Soil	MEDTMTTLNFITALFCQVDDHLPTIPKHPEAHLWPSEIVTVG
Ga0137404_101002803	3300012929	Vadose Zone Soil	MTTVDFITALFYEVDEQLRAIPKHPEAHLWPSEVV
Ga0137404_115343901	3300012929	Vadose Zone Soil	MMTVELITALFYEVDEQLRPMPQHPEAHLWPSEVVTHPSQLKL*
Ga0126375_109862121	3300012948	Tropical Forest Soil	MTTEELITALFYQVDNQLAGLLKHPEAHLWPSEVVILGLLHALKG
Ga0126369_103439953	3300012971	Tropical Forest Soil	MTTVDLITALFYEVDEQLRTIPKHPEAHLWPSEVV
Ga0126369_113204922	3300012971	Tropical Forest Soil	MTTPEFITALFYHVDEQLRTVPKPPAARRGPREVVP*
Ga0126369_125061312	3300012971	Tropical Forest Soil	MTTTIEFITVLFCQVDDHLSAIPKHPEVPLRPREVITVGLGHAHTGVGT
Ga0134077_103061071	3300012972	Grasslands Soil	MMTVECITALFSEVDEQIGAIPKHPEAHLWPSEVVTLGL
Ga0137403_102256464	3300015264	Vadose Zone Soil	MTTIDFITALFYQVDEQMRAMPKHPDAHLWPSERP*
Ga0132258_136814523	3300015371	Arabidopsis Rhizosphere	MTTTIEFITALFCQVDDQLAGLPKHPEAHLWPSEVV
Ga0132256_1029526051	3300015372	Arabidopsis Rhizosphere	MSTVVLIAALFFEVDEQLRALPTHPEAHLWPSEVVTLGLVH
Ga0182039_113710311	3300016422	Soil	MASFAMSTTMDFITALFCQVDDHLSAIPKHPEAHLWPSEV
Ga0163161_117105161	3300017792	Switchgrass Rhizosphere	MTTWDLIIALFYHVDEQLHTMPKHPEAHLWPSEPM
Ga0190266_104832291	3300017965	Soil	MTTVEFITALFYEVDEQLRTIPKHPEAHLWPSEVVIL
Ga0184638_12970251	3300018052	Groundwater Sediment	MITLDFITALFYQVDEQMRALPKHPEAHLWPSEVV
Ga0184612_105488291	3300018078	Groundwater Sediment	MTTLDFITALFYEVDEQLRAIPQHPEAHLWPSEVGTLGLLHALKGVGVVF
Ga0066667_104248681	3300018433	Grasslands Soil	MTTTIEFRTALVCQVDDQLAGLPTHPEAPLWPSEVVT
Ga0184646_12814751	3300019259	Groundwater Sediment	MTTLDFITALFYEVDEQLRAIPKHPHARRWPSEVGTLGLLHARKGG
Ga0179594_100310613	3300020170	Vadose Zone Soil	MTTIDFITAFFYQVDEQMRASPTHPEAHLWPSEVG
Ga0207681_110137431	3300025923	Switchgrass Rhizosphere	MTTTSDFITALFCQVDDHLAGLLKHPATHLWPSEV
Ga0207687_112047661	3300025927	Miscanthus Rhizosphere	MTTVEFITALFYEVDEQLRAIPKHPEAHLWPSEVLTLGLLHALTVP
Ga0207690_114433481	3300025932	Corn Rhizosphere	MTTVDFITALFYEVDEQLGTIPKHPEAHLWPSEVV
Ga0207712_108562152	3300025961	Switchgrass Rhizosphere	MTTVDFITALFYEVDEQLRAIPKHPEAHLWPSAVVTLGLLHALKG
Ga0207683_108576582	3300026121	Miscanthus Rhizosphere	EFITALFYDVDEQLHTIPKHPEAHLWPSAVVTLGLLHALTVP
Ga0209058_11447841	3300026536	Soil	MSTVEFITALFFEVDEQLCAIPKHPEAHLWPSEVVT
Ga0209879_10725271	3300027056	Groundwater Sand	MTTEEFITALFSEVDEQLRAIPKHPEAHLWPSAIVTLGLLHALKG
Ga0209843_10937221	3300027511	Groundwater Sand	MTTVDFITALFYEVDEQMGAIPKHPEAHLWASPVHRRNFVR
Ga0209076_12210681	3300027643	Vadose Zone Soil	MTVECITALFSEVDEQLGALPTHPEAHLWPSEVVPVGLLP
Ga0209799_10029624	3300027654	Tropical Forest Soil	MATVEFITALFYEVDEQLGAIPKHPEAHLWPSEVATLGLLHALKGVAIGPSIAG
Ga0209799_10179341	3300027654	Tropical Forest Soil	MTTTIELITALFSEVDEQLGAIPKHPDALLWPSEV
Ga0209180_100870853	3300027846	Vadose Zone Soil	MITVEFITALFYEIDEQQRAIPKYPEAHLWPSEVVRS
Ga0209180_104034841	3300027846	Vadose Zone Soil	MTTLEFITALFYEVDEQLRTIPKPPEAHLWPREVVT
Ga0209814_102758951	3300027873	Populus Rhizosphere	MITVEFITVLFYEVDEQLRTIPKHPEAHLWPSEVITLGLL
Ga0209465_101552331	3300027874	Tropical Forest Soil	MMTVELITALFYEVDEQLGAIPKHPEAHLWPSEVV
Ga0209590_100283292	3300027882	Vadose Zone Soil	MITLDFITALFYQVDEQMRALPKHPEAHLWPGASKTEH
Ga0209590_102092481	3300027882	Vadose Zone Soil	MITVEFITALFYEVDEQLRTIPKHPEAHLWPSAVVTLG
Ga0209590_107772662	3300027882	Vadose Zone Soil	MTATIEFITALFCQVDDQLSGFPTHPEAHLWPSEVV
Ga0209590_108004002	3300027882	Vadose Zone Soil	MTTTIEFITALFCQVDDHLPAIPKHPEAHLWPSEVV
Ga0207428_101410974	3300027907	Populus Rhizosphere	MSTVEFITALFYEVDEQLRTIPKHPDAHLWPSEIVT
Ga0308199_10017081	3300031094	Soil	MTTVECITALFYAVDEQMHALPKPPEAHLWPSEVGTLGLLHA
Ga0307497_105179062	3300031226	Soil	MITVEFITALFYEVDEQLRAIPKHPEAHLWPSEAVTLGLL
Ga0310887_110270672	3300031547	Soil	MTTWDLIIALFYHVDEQLHDMPKHREAHLWPSGVVT
Ga0318555_105646531	3300031640	Soil	MITMDFITALFYEVDEQLGAIPTHPEAHLWPSEVL
Ga0318572_102652031	3300031681	Soil	MTTIDVITALFYEVDEQMRLISTHLEAHLWPSEVVTLG
Ga0318501_102719931	3300031736	Soil	MTTEELITALFSEVDEQLRTLPTHPEAYLWPSAVVTVGLLHALKGAGNQPCSRW
Ga0307468_1007509461	3300031740	Hardwood Forest Soil	RGEESRMMTVAFITALFYEVDEQLGAIPKHPEAHLWPSAVVTLGLLHALTVP
Ga0318537_100420971	3300031763	Soil	MTTEELITALFSEVDEQLRTIPQHPEAHRWPSAVVTLGLLH
Ga0318521_108719891	3300031770	Soil	MTTEELITALFYEVDEQLRAIPKHPEAHLWPSAVVTLG
Ga0318546_109913391	3300031771	Soil	MTTIDVITALFYEVDEQMRLISTHLEAHLWPSEVVT
Ga0318523_104780402	3300031798	Soil	MTTTSEFITALFCQVDDHLAGLPTHPEAHLWPSEVITLG
Ga0318497_101201292	3300031805	Soil	MTTEELITALFSEVDEQLRTLPTHPEAYLWPSAVVTVGLLHALKGAGNQPCSRWLTRASRPLLP
Ga0318551_107899541	3300031896	Soil	MSTTMDFITALFCQVDDHLSAIPKHPEAHLWPSEV
Ga0306923_121024961	3300031910	Soil	MTTTDEFITALFCQADDQLSGFPKHPEAHLWPSEVV
Ga0310912_107165632	3300031941	Soil	MTTTSEFITAFFCQVDDHLAGLPTHPEAHLWPSEVITLGL
Ga0310910_102442993	3300031946	Soil	MTTEELITALFSEVDEQLRTLPTHPEAYLWPSAVVTVGLLHAL
Ga0306926_121552692	3300031954	Soil	MTVEFITALFYEVDEQLRAIPKHPEAHLWPSEVVT
Ga0306926_127788642	3300031954	Soil	MTTTIEFITALFCQVDDHLAGLPKHPEAHLWPSEVLT
Ga0310903_102251952	3300032000	Soil	MTTLGFISALFYEVDEPVHAIPKHPEAHLWPSEVITLCLLNARKGVGNH
Ga0307416_1003075591	3300032002	Rhizosphere	LFYEVDEQLRTIPKHPEAHLWPSEVITLGLLHALKGMGNRPFYRW
Ga0307470_108145171	3300032174	Hardwood Forest Soil	MTTVEFITALFYEVDEQMGAIPKHPEAHLWPSEVV
Ga0306920_1017568801	3300032261	Soil	MTTVELITAVFSEVDEQIGAIPTPPEAHLWPSEVVTLG
Ga0310914_116451141	3300033289	Soil	MTTWDFITALFYHVDEQLPDIPKHPEAHLWPSEVV
Ga0370545_005079_3_113	3300034643	Soil	MTTTGAFSTALCDAVDAQLHALPSHPEAHLWPSEVVT
Ga0314798_109870_3_125	3300034673	Soil	MSTVEFITALFYEVDKQMRAIPKHPEAHRWPSEVVPLGLLH

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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