NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome / Metatranscriptome Family F076194

Metagenome / Metatranscriptome Family F076194

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F076194
Family Type Metagenome / Metatranscriptome
Number of Sequences 118
Average Sequence Length 79 residues
Representative Sequence VTRSRIHAIIEDGPRAGDTVELDAAHEGDPPKEFLLADEHLGPRPADHRQAPTGAVSTYRLVGRDEERGGYVYRLVPRH
Number of Associated Samples 86
Number of Associated Scaffolds 118

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 67.80 %
% of genes near scaffold ends (potentially truncated) 32.20 %
% of genes from short scaffolds (< 2000 bps) 90.68 %
Associated GOLD sequencing projects 82
AlphaFold2 3D model prediction Yes
3D model pTM-score0.71

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Bacteria (60.169 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil
(23.729 % of family members)
Environment Ontology (ENVO) Unclassified
(30.508 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Plant → Plant rhizosphere
(64.407 % of family members)


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Multiple Sequence Alignments

Select alignment to view:      

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 0.00%    β-sheet: 33.64%    Coil/Unstructured: 66.36%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.71
Powered by PDBe Molstar

Structural matches with SCOPe domains

SCOP familySCOP domainRepresentative PDBTM-score
d.15.9.0: automated matchesd2bvca12bvc0.60298
d.15.9.0: automated matchesd5zlia15zli0.58691
d.15.9.0: automated matchesd4lnoa14lno0.58023
d.15.1.0: automated matchesd4e74a_4e740.56226
b.53.1.1: Ribosomal protein L25-liked1feua_1feu0.5336

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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 118 Family Scaffolds
PF00891Methyltransf_2 5.93
PF01544CorA 5.08
PF00440TetR_N 4.24
PF03594BenE 4.24
PF13191AAA_16 3.39
PF00296Bac_luciferase 3.39
PF12680SnoaL_2 2.54
PF02397Bac_transf 2.54
PF00313CSD 1.69
PF13359DDE_Tnp_4 0.85
PF00107ADH_zinc_N 0.85
PF11175DUF2961 0.85
PF00665rve 0.85
PF04069OpuAC 0.85
PF00990GGDEF 0.85
PF07687M20_dimer 0.85
PF13683rve_3 0.85
PF08240ADH_N 0.85
PF07690MFS_1 0.85
PF00857Isochorismatase 0.85
PF03733YccF 0.85
PF01545Cation_efflux 0.85
PF01814Hemerythrin 0.85

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 118 Family Scaffolds
COG0598Mg2+ and Co2+ transporter CorAInorganic ion transport and metabolism [P] 5.08
COG0659Sulfate permease or related transporter, MFS superfamilyInorganic ion transport and metabolism [P] 4.24
COG2233Xanthine/uracil permeaseNucleotide transport and metabolism [F] 4.24
COG2252Xanthine/guanine/uracil/vitamin C permease GhxP/GhxQ, nucleobase:cation symporter 2 ( NCS2) familyNucleotide transport and metabolism [F] 4.24
COG3135Predicted benzoate:H+ symporter BenESecondary metabolites biosynthesis, transport and catabolism [Q] 4.24
COG2141Flavin-dependent oxidoreductase, luciferase family (includes alkanesulfonate monooxygenase SsuD and methylene tetrahydromethanopterin reductase)Coenzyme transport and metabolism [H] 3.39
COG2148Sugar transferase involved in LPS biosynthesis (colanic, teichoic acid)Cell wall/membrane/envelope biogenesis [M] 2.54
COG0053Divalent metal cation (Fe/Co/Zn/Cd) efflux pumpInorganic ion transport and metabolism [P] 0.85
COG1230Co/Zn/Cd efflux system componentInorganic ion transport and metabolism [P] 0.85
COG1335Nicotinamidase-related amidaseCoenzyme transport and metabolism [H] 0.85
COG1535Isochorismate hydrolaseSecondary metabolites biosynthesis, transport and catabolism [Q] 0.85
COG2801Transposase InsO and inactivated derivativesMobilome: prophages, transposons [X] 0.85
COG2826Transposase and inactivated derivatives, IS30 familyMobilome: prophages, transposons [X] 0.85
COG3304Uncharacterized membrane protein YccF, DUF307 familyFunction unknown [S] 0.85
COG3316Transposase (or an inactivated derivative), DDE domainMobilome: prophages, transposons [X] 0.85
COG3965Predicted Co/Zn/Cd cation transporter, cation efflux familyInorganic ion transport and metabolism [P] 0.85
COG4584TransposaseMobilome: prophages, transposons [X] 0.85

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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms60.17 %
UnclassifiedrootN/A39.83 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300004016|Ga0058689_10052309All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia761Open in IMG/M
3300004081|Ga0063454_101488294Not Available578Open in IMG/M
3300004463|Ga0063356_102644491All Organisms → cellular organisms → Bacteria771Open in IMG/M
3300004800|Ga0058861_11776197All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium605Open in IMG/M
3300005329|Ga0070683_102090408Not Available544Open in IMG/M
3300005331|Ga0070670_100934294All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales787Open in IMG/M
3300005334|Ga0068869_102024872All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium517Open in IMG/M
3300005338|Ga0068868_100882591All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium812Open in IMG/M
3300005339|Ga0070660_101451083All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium583Open in IMG/M
3300005344|Ga0070661_101689887Not Available536Open in IMG/M
3300005356|Ga0070674_100382980All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia1145Open in IMG/M
3300005466|Ga0070685_10353485All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura1005Open in IMG/M
3300005466|Ga0070685_10650229All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae764Open in IMG/M
3300005548|Ga0070665_100742431All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia995Open in IMG/M
3300005564|Ga0070664_102099849Not Available536Open in IMG/M
3300005577|Ga0068857_100375161All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia1320Open in IMG/M
3300005617|Ga0068859_102241843All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae602Open in IMG/M
3300005843|Ga0068860_101534093All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium688Open in IMG/M
3300006237|Ga0097621_101785647Not Available586Open in IMG/M
3300006755|Ga0079222_11892218All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia582Open in IMG/M
3300006755|Ga0079222_12558247Not Available513Open in IMG/M
3300006806|Ga0079220_11362016All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales599Open in IMG/M
3300006844|Ga0075428_101511286All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia → unclassified Pseudonocardia → Pseudonocardia sp. P1703Open in IMG/M
3300006846|Ga0075430_100090672All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia2557Open in IMG/M
3300006880|Ga0075429_101228232All Organisms → cellular organisms → Bacteria654Open in IMG/M
3300009098|Ga0105245_10543157All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1183Open in IMG/M
3300009156|Ga0111538_10597839All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1399Open in IMG/M
3300009156|Ga0111538_10663670All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1322Open in IMG/M
3300009177|Ga0105248_13108292Not Available528Open in IMG/M
3300009789|Ga0126307_10742238Not Available792Open in IMG/M
3300009840|Ga0126313_11716989Not Available524Open in IMG/M
3300010036|Ga0126305_10055213All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia2265Open in IMG/M
3300010039|Ga0126309_10301627All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia → Pseudonocardia ammonioxydans926Open in IMG/M
3300010044|Ga0126310_10033205All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia2727Open in IMG/M
3300010146|Ga0126320_1273880All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium584Open in IMG/M
3300010166|Ga0126306_11683234Not Available529Open in IMG/M
3300010403|Ga0134123_10792015All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium940Open in IMG/M
3300011332|Ga0126317_10793480All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia → Pseudonocardia ammonioxydans922Open in IMG/M
3300011332|Ga0126317_10843184All Organisms → cellular organisms → Bacteria660Open in IMG/M
3300012212|Ga0150985_103486491All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia → Pseudonocardia ammonioxydans1051Open in IMG/M
3300012212|Ga0150985_110024241Not Available1495Open in IMG/M
3300012212|Ga0150985_111433384Not Available982Open in IMG/M
3300012212|Ga0150985_114535229All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium2025Open in IMG/M
3300012212|Ga0150985_117261069Not Available562Open in IMG/M
3300012212|Ga0150985_118892624Not Available671Open in IMG/M
3300012212|Ga0150985_121431860Not Available541Open in IMG/M
3300012212|Ga0150985_122413394All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → Geodermatophilus1836Open in IMG/M
3300012469|Ga0150984_101124831All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia1464Open in IMG/M
3300012469|Ga0150984_101687935All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia → unclassified Pseudonocardia → Pseudonocardia sp.1736Open in IMG/M
3300012469|Ga0150984_109374219Not Available700Open in IMG/M
3300012469|Ga0150984_116846424All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia1967Open in IMG/M
3300012481|Ga0157320_1011455All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium699Open in IMG/M
3300012914|Ga0157297_10414751All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria543Open in IMG/M
3300012986|Ga0164304_10238829Not Available1211Open in IMG/M
3300014326|Ga0157380_11180917All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium808Open in IMG/M
3300015372|Ga0132256_100044856All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria4080Open in IMG/M
3300018073|Ga0184624_10014481All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia2828Open in IMG/M
3300018422|Ga0190265_10797140All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia → Pseudonocardia ammonioxydans1067Open in IMG/M
3300018422|Ga0190265_11218730Not Available871Open in IMG/M
3300018432|Ga0190275_10167318All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia2045Open in IMG/M
3300018432|Ga0190275_10198979All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia1893Open in IMG/M
3300018432|Ga0190275_10764793All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia → Pseudonocardia ammonioxydans1027Open in IMG/M
3300018432|Ga0190275_10795456Not Available1009Open in IMG/M
3300018432|Ga0190275_12474802All Organisms → cellular organisms → Bacteria597Open in IMG/M
3300018432|Ga0190275_13003099All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae546Open in IMG/M
3300018465|Ga0190269_11442559Not Available562Open in IMG/M
3300018466|Ga0190268_10515659Not Available817Open in IMG/M
3300018466|Ga0190268_10603193All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia779Open in IMG/M
3300018466|Ga0190268_11712054Not Available561Open in IMG/M
3300018469|Ga0190270_10353739All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia1337Open in IMG/M
3300018469|Ga0190270_12547692Not Available574Open in IMG/M
3300018469|Ga0190270_12586307Not Available570Open in IMG/M
3300018476|Ga0190274_10417407Not Available1308Open in IMG/M
3300018481|Ga0190271_11020940Not Available951Open in IMG/M
3300018481|Ga0190271_11254021Not Available862Open in IMG/M
3300018920|Ga0190273_10006327All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia4677Open in IMG/M
3300018920|Ga0190273_10043236Not Available2225Open in IMG/M
3300018920|Ga0190273_10183878Not Available1289Open in IMG/M
3300018920|Ga0190273_11206370Not Available644Open in IMG/M
3300019377|Ga0190264_10118107Not Available1290Open in IMG/M
3300020069|Ga0197907_11326942All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium594Open in IMG/M
3300020081|Ga0206354_11236304All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium992Open in IMG/M
3300020082|Ga0206353_11343608All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium964Open in IMG/M
3300025901|Ga0207688_10400425All Organisms → cellular organisms → Bacteria851Open in IMG/M
3300025926|Ga0207659_11608641All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium554Open in IMG/M
3300025927|Ga0207687_10025776All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria3935Open in IMG/M
3300025933|Ga0207706_11474967Not Available556Open in IMG/M
3300025938|Ga0207704_11126231All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium667Open in IMG/M
3300025944|Ga0207661_10558416All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1049Open in IMG/M
3300026041|Ga0207639_11398207Not Available657Open in IMG/M
3300026078|Ga0207702_10194892All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1875Open in IMG/M
3300026095|Ga0207676_11672909Not Available635Open in IMG/M
3300027809|Ga0209574_10308032Not Available542Open in IMG/M
3300028041|Ga0247719_1042313All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae1269Open in IMG/M
3300028379|Ga0268266_10100192All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia2552Open in IMG/M
3300028379|Ga0268266_12127527Not Available534Open in IMG/M
3300028596|Ga0247821_10564739All Organisms → cellular organisms → Bacteria730Open in IMG/M
3300028597|Ga0247820_11177705Not Available552Open in IMG/M
3300028754|Ga0307297_10336373Not Available550Open in IMG/M
3300028812|Ga0247825_10271006All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1183Open in IMG/M
3300030514|Ga0268253_10189399Not Available662Open in IMG/M
3300030905|Ga0308200_1082094Not Available659Open in IMG/M
3300031562|Ga0310886_10098760All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1450Open in IMG/M
3300031852|Ga0307410_10244496All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia → Pseudonocardia ammonioxydans1392Open in IMG/M
3300031852|Ga0307410_10664556Not Available875Open in IMG/M
3300031858|Ga0310892_10688514Not Available700Open in IMG/M
3300031901|Ga0307406_10931989All Organisms → cellular organisms → Bacteria741Open in IMG/M
3300031903|Ga0307407_10827729Not Available706Open in IMG/M
3300031908|Ga0310900_10899480Not Available722Open in IMG/M
3300031995|Ga0307409_100358955All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1378Open in IMG/M
3300031995|Ga0307409_101470072Not Available708Open in IMG/M
3300031996|Ga0308176_12196247All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria589Open in IMG/M
3300032002|Ga0307416_101865103All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria705Open in IMG/M
3300032012|Ga0310902_10611149All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium725Open in IMG/M
3300032074|Ga0308173_11293735Not Available683Open in IMG/M
3300032074|Ga0308173_11491182Not Available636Open in IMG/M
3300032159|Ga0268251_10164667All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia846Open in IMG/M
3300033550|Ga0247829_10202204All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia1579Open in IMG/M


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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil23.73%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural → Soil9.32%
Avena Fatua RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere6.78%
RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere5.93%
Serpentine SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil5.08%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere4.24%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere3.39%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere3.39%
Avena Fatua RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere3.39%
SoilEnvironmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil2.54%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere2.54%
Agricultural SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil2.54%
Corn RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere2.54%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere2.54%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere2.54%
AgaveHost-Associated → Plants → Phylloplane → Unclassified → Unclassified → Agave2.54%
Corn RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere1.69%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere1.69%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere1.69%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere1.69%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment0.85%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil0.85%
SoilEnvironmental → Terrestrial → Soil → Loam → Grasslands → Soil0.85%
Host-AssociatedHost-Associated → Human → Digestive System → Large Intestine → Fecal → Host-Associated0.85%
Arabidopsis Thaliana RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere0.85%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Rhizosphere0.85%
Corn, Switchgrass And Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere0.85%
Miscanthus RhizosphereHost-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere0.85%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere0.85%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere0.85%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere0.85%
AgaveHost-Associated → Plants → Phyllosphere → Phylloplane/Leaf Surface → Unclassified → Agave0.85%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300004016Agave microbial communities from Guanajuato, Mexico - As.Ma.rzHost-AssociatedOpen in IMG/M
3300004081Grasslands soil microbial communities from Hopland, California, USA - 2 (version 2)EnvironmentalOpen in IMG/M
3300004463Combined assembly of Arabidopsis thaliana microbial communitiesHost-AssociatedOpen in IMG/M
3300004800Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - soil CB-1 (Metagenome Metatranscriptome)Host-AssociatedOpen in IMG/M
3300005329Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaGEnvironmentalOpen in IMG/M
3300005331Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaGHost-AssociatedOpen in IMG/M
3300005334Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2Host-AssociatedOpen in IMG/M
3300005338Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2Host-AssociatedOpen in IMG/M
3300005339Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaGHost-AssociatedOpen in IMG/M
3300005344Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaGHost-AssociatedOpen in IMG/M
3300005356Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaGHost-AssociatedOpen in IMG/M
3300005466Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaGEnvironmentalOpen in IMG/M
3300005548Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaGHost-AssociatedOpen in IMG/M
3300005564Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaGHost-AssociatedOpen in IMG/M
3300005577Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2Host-AssociatedOpen in IMG/M
3300005617Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2Host-AssociatedOpen in IMG/M
3300005843Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2Host-AssociatedOpen in IMG/M
3300006237Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2)Host-AssociatedOpen in IMG/M
3300006755Agricultural soil microbial communities from Georgia to study Nitrogen management - GA PlitterEnvironmentalOpen in IMG/M
3300006806Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100EnvironmentalOpen in IMG/M
3300006844Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2Host-AssociatedOpen in IMG/M
3300006846Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4Host-AssociatedOpen in IMG/M
3300006880Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3Host-AssociatedOpen in IMG/M
3300009098Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaGHost-AssociatedOpen in IMG/M
3300009156Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)Host-AssociatedOpen in IMG/M
3300009177Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaGHost-AssociatedOpen in IMG/M
3300009789Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot28EnvironmentalOpen in IMG/M
3300009840Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105AEnvironmentalOpen in IMG/M
3300010036Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot26EnvironmentalOpen in IMG/M
3300010039Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot56EnvironmentalOpen in IMG/M
3300010044Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot60EnvironmentalOpen in IMG/M
3300010146Soil microbial communities from California, USA to study soil gas exchange rates - JR-CA-SND metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300010166Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot27EnvironmentalOpen in IMG/M
3300010403Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3EnvironmentalOpen in IMG/M
3300011332Soil microbial communities from California, USA to study soil gas exchange rates - SR-CA-SC2 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300012212Combined assembly of Hopland grassland soilHost-AssociatedOpen in IMG/M
3300012469Combined assembly of Soil carbon rhizosphereHost-AssociatedOpen in IMG/M
3300012481Arabidopsis rhizosphere microbial communities from North Carolina - M.Cvi.1.yng.040610Host-AssociatedOpen in IMG/M
3300012914Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S028-104C-2EnvironmentalOpen in IMG/M
3300012986Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MGEnvironmentalOpen in IMG/M
3300014326Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaGHost-AssociatedOpen in IMG/M
3300015372Soil combined assemblyHost-AssociatedOpen in IMG/M
3300018073Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_5_b1EnvironmentalOpen in IMG/M
3300018422Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 124 TEnvironmentalOpen in IMG/M
3300018432Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 550 TEnvironmentalOpen in IMG/M
3300018465Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 ISEnvironmentalOpen in IMG/M
3300018466Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 TEnvironmentalOpen in IMG/M
3300018469Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 TEnvironmentalOpen in IMG/M
3300018476Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 TEnvironmentalOpen in IMG/M
3300018481Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 356 TEnvironmentalOpen in IMG/M
3300018920Populus adjacent soil microbial communities from riparian zone of Shoshone River, Wyoming, USA - 504 ISEnvironmentalOpen in IMG/M
3300019377Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 112 TEnvironmentalOpen in IMG/M
3300020069Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-2 (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300020081Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-3 (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300020082Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-4 (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300025901Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes)Host-AssociatedOpen in IMG/M
3300025926Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025927Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025933Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025938Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300025944Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes)EnvironmentalOpen in IMG/M
3300026041Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026078Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026095Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300027809Agave microbial communities from Guanajuato, Mexico - Mg.Ma.rz (SPAdes)Host-AssociatedOpen in IMG/M
3300028041Soil microbial communities from hillslope of Landscape Evolution Observatory, University of Arizona, Oracle, AZ, United States - 4-1-E_DEnvironmentalOpen in IMG/M
3300028379Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300028596Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Glycerol_Day14EnvironmentalOpen in IMG/M
3300028597Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Glucose_Day14EnvironmentalOpen in IMG/M
3300028754Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_157EnvironmentalOpen in IMG/M
3300028812Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Vanillin_Day48EnvironmentalOpen in IMG/M
3300030514Agave microbial communities from Guanajuato, Mexico - Mg.Ma.rz (v2)Host-AssociatedOpen in IMG/M
3300030905Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_204 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300031562Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D3EnvironmentalOpen in IMG/M
3300031852Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3Host-AssociatedOpen in IMG/M
3300031858Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D2EnvironmentalOpen in IMG/M
3300031901Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2Host-AssociatedOpen in IMG/M
3300031903Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1Host-AssociatedOpen in IMG/M
3300031908Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D1EnvironmentalOpen in IMG/M
3300031995Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2Host-AssociatedOpen in IMG/M
3300031996Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R2EnvironmentalOpen in IMG/M
3300032002Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3Host-AssociatedOpen in IMG/M
3300032012Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D3EnvironmentalOpen in IMG/M
3300032074Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.P.R1EnvironmentalOpen in IMG/M
3300032159Agave microbial communities from Guanajuato, Mexico - As.Ma.e (v2)Host-AssociatedOpen in IMG/M
3300033550Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day4EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
Ga0058689_1005230913300004016AgaveVTRPRIHAIIEDGPRAGDTVELDAAHEGEPPKEFLLADEHVGPRSADHRQAPTGAVSTYCLVGRDEERGGYVYRLAPRA*
Ga0063454_10148829413300004081SoilGETVQIDVAHEGAPPKEFLLADEHLGVRPADHATPPPSGSVSIYRLVGRDEERGAYIYRVASRQ*
Ga0063356_10264449123300004463Arabidopsis Thaliana RhizosphereVTRSRIHAIIEDGPRAGDTVELDAAHEGVPPEEFLLADEHLGPRTAEHRQAPTGSVSTYRLVGRDEERGGYVYRLAPRE*
Ga0058861_1177619713300004800Host-AssociatedVTRSRIHAIIEDGPRAGDTVELDAAHEGDPPKEFLLPDEHLGPRPADHRQAPTGAVSTYRLVGRDEERGGYVYRLVPRH*
Ga0070683_10209040823300005329Corn RhizosphereRRVTRSRIHAIIEDGPRAGETVQLDAAHEGVPPMEFLLADEHFGPRTAEHRQAPSGSVSTYRLVGRDDERDGYVYRLAPRD*
Ga0070670_10093429413300005331Switchgrass RhizosphereVTRSRIHAIIDDGPRAGDTVELDAAHEGDPPKEFLLADEHLGPRPADHRQAPTGAVSTYRLVGRDEERGGYVYRLVPRH*
Ga0068869_10202487213300005334Miscanthus RhizosphereRAGDTVELDAAHEGDPPKEFLLPDEHLGPRPADHRQAPTGAVSTYRLVGRDEERGGYVYRLVPRH*
Ga0068868_10088259113300005338Miscanthus RhizosphereVTRSRIHAIIEDGPRAGDTVELDAAHEGDPPKEFLLPDEHLGPRPADHRQAPTGAVSTYRLVGRDEEHGGYVYRLVPRH*
Ga0070660_10145108313300005339Corn RhizosphereVTRSRIHAIIEDGPRAGDTVELDAAHEGDPPKEFLLPDEHLGPRPADHRQAPTGAVSTYRLVGRDEERGGYVYRLAPRH*
Ga0070661_10168988723300005344Corn RhizosphereVTRSRIHAIIEDGPRAGETVQLDAAHEGVPPMEFLLADEHFGPRTAEHRQAPSGSVSTYRLVGRDDERDGYVYRLAPRD*
Ga0070674_10038298033300005356Miscanthus RhizosphereVTRSRIHAIIEDGPRAGDTVELDAAHEGDPPKEFLLADEHLGPRPADHRQAPTGAVSTYRLVGRDEERGGYVYRLVPRH*
Ga0070685_1035348523300005466Switchgrass RhizosphereMTRPTIKAILQDGPRAGETVSLDAGHEDDPPKEFLLADEHLGSRASDHRVGPPSGSVSTYRLVGQDEQRNGYLYRVVPR*
Ga0070685_1065022913300005466Switchgrass RhizosphereVTRSRIHAIIEDGPRAGETVQLDAAHEGVPPMEFLLADEHFGPRTAEHRQAPSGSVSTYRLVGRDDERD
Ga0070665_10074243123300005548Switchgrass RhizosphereSGQVTRSRIHAIIDDGPRAGDTVELDAAHEGDPPKEFLLADEHLGPRPADHRQAPTGAVSTYRLVGRDEERGGYIYRLAPRP*
Ga0070664_10209984913300005564Corn RhizospherePRAGETVQLDAAHEGVPPMEFLLADEHFGPRTAEHRQAPSGSVSTYRLVGRDDERDGYVYRLAPRD*
Ga0068857_10037516113300005577Corn RhizosphereVTRSRIHAIIEDGPRAGDTVELDAAHEGDPPKEFLLPDEHLGPRPADHRQAPTGAVSTYRLVGRDEERGG
Ga0068859_10224184313300005617Switchgrass RhizosphereIDRRRGSRRVTRSRIHAIIEDGPRAGETVQLDAAHEGVPPMEFLLADEHFGPRTAEHRQAPSGSVSTYRLVGRDDERDGYVYRLAPRD*
Ga0068860_10153409323300005843Switchgrass RhizosphereVTRSRIHAIIEDGPRAGDTVELDAAHEGDPPKEFLLPDEHLGPRPADHRQAPTGAVSTYRLVGRDEERGGYVYRVKPRQ*
Ga0097621_10178564713300006237Miscanthus RhizosphereRAGETVQLDAAHEGVPPMEFLLADEHFGPRTAEHRQAPSGSVSTYRLVGRDDERDGYVYRLAPRD*
Ga0079222_1189221813300006755Agricultural SoilVTRPRIQAIIEDGPRAGETIQLDVGHEGVAPKEFLLADEHLGARPAGHTADRPTGAVSTYRLVGQDDERGGFVYRVAHGE*
Ga0079222_1255824713300006755Agricultural SoilVTRSRIHAIIEDGPRAGDTVELDAAHEGVPPKEFLLADEHLGPRTADHRQAPTGAVSTYRLVGRDEERGGYVYRLV
Ga0079220_1136201623300006806Agricultural SoilVTRSRIHAIIEDGPRAGDTVELDAAHEGVPPKEFLLADEHLGPRTADHRQAPTGAVSTYRLVGRDEERGGYVYRLVPRG*
Ga0075428_10151128613300006844Populus RhizosphereMTRPTINAILRDGPRAGETVSLDAGHQGDPPKEFLLADEHLGARSADHRVDPPSGSVSTYRLVGRDEQRNGYLYRLVPRD*
Ga0075430_10009067233300006846Populus RhizosphereMTRPKISAILEDGPRAGETVQLDVGHDDEPPKEFLLADEHLGARPADHRVQPPTGSVSTYRLIGRDEEHGGYRYRVVPRT*
Ga0075429_10122823223300006880Populus RhizosphereMTRPKISAILEDGPRAGETVQLDVGHDDEPPKEFLLADEHLGARPADHRVQPPTGSVSTYRLVGRDEEHGGYRYRVVPRT*
Ga0105245_1054315713300009098Miscanthus RhizosphereELGILRARSRSGSAILGVDRRRRSGQVTRSRIHAIIDDGPRAGDTVELDAAHEGDPPKEFLLPDEHLGPRPADHRQAPTGAVSTYRLVGRDEERGGYVYRLVPRH*
Ga0111538_1059783923300009156Populus RhizosphereMTRPKISAIIEDGPRAGETVQLDVGHDDEPPKEFLLADEHLGARSADHRVQPPTGSVSTYRLVGRDEEHGGYRYRVVPRT*
Ga0111538_1066367033300009156Populus RhizosphereVTRSRIHAIIEDGPRAGDTVELDAAHEGDPPKEFLLPDEHLGPRPADHRQAPTGAVSTYRLVGRDEERGGYVYRVAPRQ*
Ga0105248_1310829213300009177Switchgrass RhizosphereVTRSRIHAIIEDGPRAGDTVELDAAHEGDPPKEFLLADEHLGPRPADHRQAPTGAVSTYRLVGRDEERGGYVYRLAPRH*
Ga0126307_1074223823300009789Serpentine SoilVVTRPTANAIIEDGPRAGETVQLDIGHEDDPPKEFLLADEHLGVHTSDHAGRPPTGSVSTYRLVGRDEERGGYRYRVVPRR*
Ga0126313_1171698913300009840Serpentine SoilIIEDGPRAGETVRLNIAHEDDPPKEFLLADEHLGVHTADHAGHPPTGSVSTYRLVGRDDEGGGYRYRVVPRA*
Ga0126305_1005521333300010036Serpentine SoilVVTRPTANAIIEDGPRAGETVQLDIGHEDDPPKEFLLADEHLGVHTADHAGRPPTGAVSTYRLVGRDEERGGYRYRVVPRR*
Ga0126309_1030162723300010039Serpentine SoilRWMPNRDEGVEVTSRPTINAIIEDGPRAGETVRLDIGHEDDPPKEFLLADEHLGVHTADHAGRPPTGSVSTYRLVGRDEERGGYRYRVVPRR*
Ga0126310_1003320543300010044Serpentine SoilVVTRPTANAIIEDGPRAGETVQLDIGHEDDPPKEFLLADEHLGVHTADHAGRPPTGSVSTYRLVGRDEERGGYRYRVVPRR*
Ga0126320_127388023300010146SoilVTRSRIHAIIDDGPRAGDTVEVDAAHEGDPPKEFLLADEHLGPRPADHRQAPTGAVSTYRLVGRDEERGGYVYRLAPRH*
Ga0126306_1168323413300010166Serpentine SoilVTRPTILAIIDDGPRAGDTVHLDAEANDHPPKEFLLADEHLGARPADRRTPPSGSVSIYCLVGRDEERDGYVYKLAQRP*
Ga0134123_1079201533300010403Terrestrial SoilIIEDGPRAGDTVELDAAHEGDPPKEFLLPDEHLGPRPADHRQAPTGAVSTYRLVGRDEERGGYVYRLVPRH*
Ga0126317_1079348023300011332SoilGPRAGETVQLDIGHEDDPPKEFLLADEHLGVHTADHAGRPPTGSVSTYRLVGRDEERGGYRYRVVPRK*
Ga0126317_1084318423300011332SoilAIIEDGPRAGETVHLDAEGEDHPPKEFLLPDEHLGARPADRRTPPSGSVSIYRLVGRDEERGGYVYKVERRH*
Ga0150985_10348649123300012212Avena Fatua RhizosphereVTRPTANAIIEDGPRAGETVQLDIGHENDPPKEFLLADEHLGVHTSDHAGRPPTGSVSTYRLVGRDEERGGYRYRVVPRR*
Ga0150985_11002424123300012212Avena Fatua RhizosphereVTRATIHAIIEDGPRAGETIQLDVEHEGVAPKQFLLADEHLGARSADQSVRPPTGAVSTYSLVGRDDERGGYVYRVAPRQ*
Ga0150985_11143338423300012212Avena Fatua RhizosphereMSRPTIQAIIEDGPRAGETVQLDIAREGDPPRQFMLADEHLGARPADRRVNPPSGRVSMYRLVGYDEERGGYVYRLVPPE*
Ga0150985_11453522923300012212Avena Fatua RhizosphereMTRPRIHAIIEDGPRAGDTVELDAAHEGVPPKEFLLADEHLGPRPADHRQAPTGAVSTYRLVGQDEERGGYVYRLAPRQ*
Ga0150985_11726106913300012212Avena Fatua RhizosphereVTRSRIHAIIEDGPRAGDTVELDAAHEGDPPKEFLLADEHLGPRPADHRQAPTGAVSTYCLVGRDEERGGYVYRLKRRR*
Ga0150985_11889262413300012212Avena Fatua RhizosphereMSIPTIQAIIEDGPRAGETVRLDIASEGDPPRQFMLADEHLGPRPADHRVQPPSGRVSIYRLVGYDEERGGYVYRLVPPE*
Ga0150985_12143186013300012212Avena Fatua RhizosphereRAGETVHLDAEGEDHPPKEFLFPDEHLGARPADRRTPPSGSVSIYRLVGRDEERGGYVYKVERRH*
Ga0150985_12241339433300012212Avena Fatua RhizosphereVTRPTIQAIIEGGPRAGETVQIDVAHEGAPPKEFLLADEHLGVRPADHATPPPSGSVSIYRLVGRDEERGAYIYRVASRQ*
Ga0150984_10112483123300012469Avena Fatua RhizosphereVTRSRIHAIIEDGPRAGDTVELDAAHEGDPPKEFLLADEHLGPRPADHRQAPTGAVSTYRLVGRDEERGGYVYRLVPRQ*
Ga0150984_10168793513300012469Avena Fatua RhizosphereVTRPTANAIIEDGPRAGETVQLDIGHENDPPKEFLLADEHLGVHTSDHAGRPPTGSVSTYRLVGRDEERGGYRYRVVPRK*
Ga0150984_10937421923300012469Avena Fatua RhizosphereMSRPTIQAIIEVPRAGETVRLDIASEGDPPRQFMLADEHLGPRPADHRVQPPSGRVSIYRLVGYDEERGGYVYRLVPPE*
Ga0150984_11684642413300012469Avena Fatua RhizosphereIHAIIEDGPRAGDTVELDAAHEGDPPKEFLLPDEHLGPRPADHRQAPTGAVSTYRLVGRDEERGGYVYRLAPRH*
Ga0157320_101145523300012481Arabidopsis RhizosphereSRIHAIIDDGPRAGDTVELDAAHEGDPPKEFLLPDEHLGPRPADHRQAPTGAVSIYRLVGRDEERGGYVYRLVPRQ*
Ga0157297_1041475113300012914SoilMTRSTIHAIIEDGPRAGETVQLDAAHEGVPPKEFLLADEHLGPRTAEHRQAPSGSVSTYRLVGRDEER
Ga0164304_1023882933300012986SoilVTRSRIHAIIEDGPRAGDTVELDAAHEGDPPKEFLLPDEHLGPRPADHRQAPTGAVSIYRLVGRDEERGGYVY
Ga0157380_1118091723300014326Switchgrass RhizosphereVTRSRIHAIIEDGPRAGDTVELDAAHEGDPPKEFLLPDEHLGPRPADHREAPTGAVSTYRLVGRDEERGGYVYRLVPRH*
Ga0132256_10004485663300015372Arabidopsis RhizosphereVTRSRIHAIIEDGPRAGDTVELDAAHEGDPPKEFLLPDEHLGPRPADRRQAPTGAVSIYRLVGRDEERGGYVYRLVPRQ*
Ga0184624_1001448123300018073Groundwater SedimentVTRPTIHAIIEDGPRAGETVQLDAAHEGVPPKEFLLADEHLGPRTAEHRQAPSGSVSTYRLVGRDEERGGYVYRLAPRE
Ga0190265_1079714023300018422SoilVVTRPTANAIIEDGPRAGETVQLDIGHEDDPPKEFLLADEHLGVHTADHAGRPPTGSVSTYRLVGRDEERGGYRYRVVPRK
Ga0190265_1121873023300018422SoilVTRPTILAIIEDGPRAGETVHLDAEAKDHPPKEFLLADEHLGARPADRRTPPSGSVSIYCLVGRDEERGGYVYKLAQRP
Ga0190275_1016731833300018432SoilVVTRPTANAIIEDGPRAGETVQLDIGHEDDPPKEFLLADEHLGVHTSDHAGRPPTGSVSTYRLVGRDEERGGYRYRVVPRR
Ga0190275_1019897913300018432SoilMTRPRINAILQDGPRAGETVSLDVGHQDDPPKEFLLADEHLGARSADHRVDPPSGSVSTYRLVGRDEQRNGYLYQLVPRD
Ga0190275_1076479323300018432SoilVTRPTANAIIEDGPRAGETVQLDIGHEDDPPKEFLLADEHLGVHTADHAGRPPTGSVSTYRLVGRDEERGGYRYRVVPRK
Ga0190275_1079545613300018432SoilMPNGDEGVEAMTRPKINAIIEDGPRAGETVQLDVGHDDEPPKEFLLADEHLGARPADHRVQPPTGSVSTYRLVGRDEEHAGYRYRVVPRT
Ga0190275_1247480213300018432SoilVTCATVAAVTRPTILAIIEDGPRAGETVHLDAEAKDHPPKEFLLADEHLGARPADRRTPPSGSVSIYCLVGRDEERGGYVYKLAQRP
Ga0190275_1300309913300018432SoilMTRPTIKAILQDGPRAGETVSLDAGHEDDPPKEFLLADEHLGSRASDHRVEPPSGSVSTYRLVGQDEQRNGYLYRVVPR
Ga0190269_1144255913300018465SoilMTRPTITAILQDGPRAGETVSLDVGHQDDPPKEFLLADEHLGARSADHRVDPPSGSVSTYRLVGRDE
Ga0190268_1051565923300018466SoilVTRPTILAIIEDGPRAGDTVHLDAEAKDHPPKEFLLPDEHLGARPADRRTPPSGSVSIYRLVGRDEERGGYVYKLAQRP
Ga0190268_1060319323300018466SoilDLVLPMRTGDEGAGAMTRPRINAILQDGPRAGETVSLDVGHQDDPPKEFLLADEHLGARSADHRVDRPSGSVSTYRLVGRDEQRNGYLYQLVPRD
Ga0190268_1171205423300018466SoilMTRPKIHAIIEDGPRAGDTVDLDAAHEGDPPKEFLLPDEHLGPRPADHRQAPTGAVSTYCLVGRDEERGGYVYRLA
Ga0190270_1035373913300018469SoilVVTRPTANAIIEDGPRAGETVQLDIGHEDDPPKEFLLADEHLGVHTADHAGHPPTGSVSTYRLVGRDDEGGGYRYRVVPRA
Ga0190270_1254769213300018469SoilVTRSKIHAIIEDGPRAGETVQLDAAHEGVPPREFLLADEHLGARTAEHRQAPSGSVSTYRLVGRDDERDGYVYRLVPRD
Ga0190270_1258630723300018469SoilVTRSKIHAIIEDGPRAGETVEVSPVHESEPPKEFLLADEHLGPRDAEHRQAPSGSVSTYRLVGRDDERDGYVYRLVPRE
Ga0190274_1041740723300018476SoilMTRPRINAILQDGPRAGETVSLDVGHQDDPPKEFLLADEHLGARSADHRVDRPSGSVSTYRLVGRDEQRNGYLYQLVPRD
Ga0190271_1102094023300018481SoilMTRPKISALIEDGPRAGDTVQLDVGHDDEPPKEFLLADEHLGARSADHRVQPPTGSVSTYRLVGRDEEHGGYRYRVVPRT
Ga0190271_1125402123300018481SoilMTRPRINAILQDGPRAGETVSLDAGHQDDPPKEFLLADEHLGARSADHRVDPPSGSVSTYRLVGRDEQRNGYLYQLVPRD
Ga0190273_1000632733300018920SoilMVTRPTANAIIEDGPRAGETVQLDIGHEDDPPKEFLLADEHLGVHTADHAGRPPTGSVSTYRLVGRDEERGGYRYRVVPRK
Ga0190273_1004323623300018920SoilVPNRDEGVEVTSRPTINAIIEDGPRAGETVRLDIGHEDDPPKEFLLADEHLGVHTADHAGRPPTGSVSTYRLVGRDEDRDGYRYRVVPRA
Ga0190273_1018387823300018920SoilVPNRDEGVEVTIRPTINAIIEDGPRAGETVRLDIGHEDDPPKEFLLADEHLGVHTPDHAGRPPTGSVSTYRLVGRDDDRGGYRYRVVPRA
Ga0190273_1120637023300018920SoilGAGAMTRPTINAILQDGPRAGETVSLDAAHQDDPPKEFLLADEHLGARSADHRVDPPSGSVSTYRLVGRDEQRNGYLYQLVPRD
Ga0190264_1011810713300019377SoilMTRPTITAILQDGPRAGETVSLDVGHPDDPPKEFLLADEHLGARSADHRVDPPSGSVSTYRLVGQDEQRNGYLYRLVPRD
Ga0197907_1132694213300020069Corn, Switchgrass And Miscanthus RhizosphereVTRSRIHAIIEDGPRAGDTVELDAAHEGDPPKEFLLPDEHLGPRPADHRQAPTGAVSTYRLVGRDEERGGYVYRLAPRH
Ga0206354_1123630413300020081Corn, Switchgrass And Miscanthus RhizosphereRSRIHAIIEDGPRAGDTVELDAAHEGDPPKEFLLPDEHLGPRPADHRQAPTGAVSTYRLVGRDEERGGYVYRLVPRH
Ga0206353_1134360823300020082Corn, Switchgrass And Miscanthus RhizosphereVTRSRIHAIIEDGPRAGDTVELDAAHEGDPPKEFLLPDEHLGPRPADHRQAPTGAVSTYRLVGRDEERGGYVYRLVPRH
Ga0207688_1040042523300025901Corn, Switchgrass And Miscanthus RhizosphereMTRPKISAIIEDGPRAGDTVQLDVGHDDEPPKEFLLADEHLGARSADHRVQPPTGSVSTYRLVGRDEEHGGYRYRVVPRT
Ga0207659_1160864123300025926Miscanthus RhizosphereRSVTRSRIHAIIEDGPRAGDTVELDAAHEGDPPKEFLLPDEHLGPRPADHRQAPTGAVSTYRLVGRDEERGGYVYRLVPRH
Ga0207687_1002577653300025927Miscanthus RhizosphereVTRSRIHAIIEDGPRAGETVQLDAAHEGVPPMEFLLADEHFGPRTAEHRQAPSGSVSTYRLVGRDDERDGYVYRLAPRD
Ga0207706_1147496713300025933Corn RhizosphereMTRPKISAIIEDGPRAGETVQLDVGNDDEPPKEFLLADEHLGARSADHRVQPPTGSVSTYRLVGRDEEHGGYRYRVVPRT
Ga0207704_1112623133300025938Miscanthus RhizosphereVTRSRIHAIIDDGPRAGDTVELDAAHEGDPPKEFLLPDEHLGPRPADHRQAPTGAVSTYRLVGRDEERGGYVYRLVPRH
Ga0207661_1055841613300025944Corn RhizosphereVTRSRIHAIIEDGPRAGDTVELDAAHEGDPPKEFLLPDEHLAPRPADHRQAPTGAVSTYRLVGRDEERGGYVYRLVPRH
Ga0207639_1139820723300026041Corn RhizosphereVSRSRIHAIIEDGPRAGDTVELDAAHEGDPPKEFLLPDEHLGPRTADHREAPTGAVSTYRLVGRDEERGGYVYRVAPRQ
Ga0207702_1019489223300026078Corn RhizosphereVSRSRIHAIIEDGPRAGDTVELDAAHEGDPPKEFLLPDEHLGPRTADHREAPTGAVSTYRLVGRDEERGGYVYRVAPRH
Ga0207676_1167290913300026095Switchgrass RhizosphereVTRSRIHAIIEDGPRAGDTVELDAAHEGDPPKEFPLPDEHLGPRTADHREAPTGAVSTYRLVGRDEERGGYVYRVAPRQ
Ga0209574_1030803223300027809AgaveVTRSRIHAIIDDGPRAGDTVELDAAHEGEPPKEFLLADEHVGPRSADHRQAPTGAVSTYCLVGRDEERGGYVYRLAPRH
Ga0247719_104231313300028041SoilVTRPTIRVIIEDGPRAGETVQLDVEHEDAPPQEFLLADEHLGVRPADHPKRPPSGAVSTYHLVGRDEQRGGYIYRVAHRE
Ga0268266_1010019243300028379Switchgrass RhizosphereSGQVTRSRIHAIIDDGPRAGDTVELDAAHEGDPPKEFLLADEHLGPRPADHRQAPTGAVSTYRLVGRDEERGGYVYRLVPRH
Ga0268266_1212752713300028379Switchgrass RhizosphereRRRQIRMRDEELRPMTRPTIKAILQDGPRAGETVSLDAGHEDDPPKEFLLADEHLGSRASDHRVGPPSGSVSTYRLVGQDEQRNGYLYRVVPR
Ga0247821_1056473913300028596SoilPKISALIEDGPRAGDTVQLDVGHDDEPPKEFLLADEHLGARSADHRVQPPTGSVSTYRLVGRDEEHGGYRYRVVPRT
Ga0247820_1117770523300028597SoilMTRPKISALIEDGPRAGDTVQLDVGHDDEPPKEFLLADEHLGARSADHRVQPPTGSVSTYRLVGRDEEHGGYRYRVVPR
Ga0307297_1033637323300028754SoilVTRSRIHAIIEDGPRAGDTVELDAAHEGVPPEEFLLADEHLGPRTAEHRQAPTGSVSTYRLVGRDEERGGYVYRLAPRE
Ga0247825_1027100633300028812SoilIIEDGPRAGDTVELDAAHEGDPPKEFLLPDEHLGPRPADHRQAPTGAVSTYRLVGRDEERGGYVYRLVPRH
Ga0268253_1018939913300030514AgaveVTRSTINAIIEDGPRAGEIVQLDAAHEGVPPREFLLADEHLGARTAEHRQAPSGSVSTYRLVGRDDERDGYVYRLAPRD
Ga0308200_108209413300030905SoilVTRSRIHAIIEDGPRAGDTVELDAAHEGVPPKEFLLADEHLGPRTAEHRQAPTGSVSTYRLVGRDEERGGYVYRLAPRE
Ga0310886_1009876023300031562SoilVTRSRIHAIIEDGPRAGDTVELDAAHEGDPPKEFLLPDEHLGPRPADHRQAPTGAVSIYRLVGRDEERGGYVYRLVPRQ
Ga0307410_1024449623300031852RhizosphereVTRPTANAIIEDGPRAGETVQLDIGHEDDPPKEFLLADEHLGVHTSDHAGRPPTGSVSTYRLVGRDEERGGYRYRVVPRR
Ga0307410_1066455613300031852RhizosphereMTRPTIPAILQDGPRAGETVSLDVGHQDDPLKEFLLADEHLGARSADHRVDPPSGSVSTYRLVGRDEQRNGYLYRLVPRD
Ga0310892_1068851423300031858SoilVTRSRIHAIIEDGPRAGDTVELDAAHEGDPPKEFLLPDEHLGPRPADRRQAPTGAVSIYRLVGRDEERGGYVYRLVPRQ
Ga0307406_1093198913300031901RhizosphereVTRSTIHAILEDGPRAGETVRLDSAHEGVPPKEFLLADEHLGARTAEHRQAPSGSVSSYRLVGYDEERGGYVYRLAPRE
Ga0307407_1082772913300031903RhizosphereVGAMTRPTITAILQDGPRAGETVSLDVGHQDDPPKEFLLADEHLGARSADHRVDPPSGSVSTYRLVGRDEQRNGYRYRLVPRD
Ga0310900_1089948013300031908SoilMTRSTIHAIIKDGPRAGETVQLDAAHEGVPPKEFLLADEHLGPRTAEHRQAPSGSVSTYRLVGRDDERDGYVYRLAPRD
Ga0307409_10035895523300031995RhizosphereVTRSTIHAILDDGPRAGETVRLDSAHEGVPPKEFLLADEHLGARTAEHRQAPSGSVSSYRLVGYDEERGGYVYRLAPRE
Ga0307409_10147007213300031995RhizosphereRAILEDGPRAGETVEVDTQREGVPPKEFLLADEHFGVRPADRPVRSPSGAVSIYRLVGPDQERGGYVYKVVRHEG
Ga0308176_1219624713300031996SoilGRHASCRDVCVVATTDDEGTAAMSRPTIQAIIEDGPRAGETVRLDIASEGDPPRQFMLADEHLGPRPADHRVQPPSGRVSIYRLVGYDEERGGYVYRLVPPE
Ga0307416_10186510323300032002RhizosphereAPRVSGASAVWVLLGIGERQGSQRVTRSTIHAILEDGPRAGETVRLDSAHEGVPPKEFLLADEHLGARTAEHRQAPSGSVSSYRLVGYDEERGGYVYRLAPRE
Ga0310902_1061114923300032012SoilVTRSRIHAIIEDGPRAGDTVELDAAHEGDPPKEFLLPDEHLGPRPADHRQAPTGAVSIYRLVGRDEERGGYVYRLMPRQ
Ga0308173_1129373513300032074SoilVTRPTILAIIEDGPRAGENVHLDAEGEDHPPQEFLLPDEHLGARPADRRTPPSGSVSIYRLVGRDEERGGYVYKVERRH
Ga0308173_1149118223300032074SoilVTRSRIHAIIEDGPRAGDTVELDAAHEGDPPKEFLLPDEHLGPRPADHRQAPTGAVSIYRLVGRDEERGGYVYRLAPRQ
Ga0268251_1016466723300032159AgaveVTRPRIHAIIEDGPRAGDTVELDAAHEGEPPKEFLLADEHVGPRSADHRQAPTGAVSTYCLVGRDEERGGYVYRLAPRA
Ga0247829_1020220433300033550SoilMTRPKISAIIEDGPRAGETVQLDVGHDDEPPKEFLLADEHLGARSADHRVQPPTGSVSTYRLVGRDEEHGGYRYRVVPRT

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Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
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