NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome / Metatranscriptome Family F076099

Metagenome / Metatranscriptome Family F076099

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F076099
Family Type Metagenome / Metatranscriptome
Number of Sequences 118
Average Sequence Length 48 residues
Representative Sequence MYQVNKGINIDYAETLIKDFLAEGLNLYDISEIMHLPLSQILDILTRRIH
Number of Associated Samples 74
Number of Associated Scaffolds 118

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 83.90 %
% of genes near scaffold ends (potentially truncated) 32.20 %
% of genes from short scaffolds (< 2000 bps) 77.12 %
Associated GOLD sequencing projects 64
AlphaFold2 3D model prediction No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Unclassified (90.678 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lake
(26.271 % of family members)
Environment Ontology (ENVO) Unclassified
(53.390 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Water (non-saline)
(55.932 % of family members)



 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      


 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 62.00%    β-sheet: 0.00%    Coil/Unstructured: 38.00%
Feature Viewer
Powered by Feature Viewer


 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 118 Family Scaffolds
PF04193PQ-loop 14.41
PF10263SprT-like 12.71
PF00535Glycos_transf_2 1.69
PF00596Aldolase_II 0.85
PF01027Bax1-I 0.85
PF00149Metallophos 0.85
PF03237Terminase_6N 0.85
PF01503PRA-PH 0.85



 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
UnclassifiedrootN/A90.68 %
All OrganismsrootAll Organisms9.32 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300000882|FwDRAFT_10094434Not Available604Open in IMG/M
3300000929|NpDRAFT_10059678Not Available694Open in IMG/M
3300001266|B570J13884_101808All Organisms → Viruses → Predicted Viral1597Open in IMG/M
3300002447|JGI24768J34885_10127855Not Available857Open in IMG/M
3300003277|JGI25908J49247_10010425Not Available2896Open in IMG/M
3300003277|JGI25908J49247_10049150Not Available1109Open in IMG/M
3300003277|JGI25908J49247_10060957Not Available962Open in IMG/M
3300003277|JGI25908J49247_10080069Not Available806Open in IMG/M
3300003388|JGI25910J50241_10025727Not Available2030Open in IMG/M
3300003388|JGI25910J50241_10116553Not Available720Open in IMG/M
3300003393|JGI25909J50240_1065015Not Available742Open in IMG/M
3300003393|JGI25909J50240_1088141Not Available619Open in IMG/M
3300003394|JGI25907J50239_1007460All Organisms → Viruses → Predicted Viral2612Open in IMG/M
3300003394|JGI25907J50239_1034309Not Available1075Open in IMG/M
3300003488|JGI25919J51413_1011990Not Available669Open in IMG/M
3300004096|Ga0066177_10511440Not Available532Open in IMG/M
3300004112|Ga0065166_10341982Not Available617Open in IMG/M
3300004763|Ga0007746_1404641Not Available1633Open in IMG/M
3300004790|Ga0007758_11161248Not Available674Open in IMG/M
3300005517|Ga0070374_10210517Not Available999Open in IMG/M
3300005580|Ga0049083_10107569Not Available964Open in IMG/M
3300005580|Ga0049083_10278346Not Available561Open in IMG/M
3300005581|Ga0049081_10003861Not Available5651Open in IMG/M
3300005581|Ga0049081_10010146Not Available3569Open in IMG/M
3300005581|Ga0049081_10044368Not Available1686Open in IMG/M
3300005582|Ga0049080_10012092Not Available2993Open in IMG/M
3300005582|Ga0049080_10219976Not Available624Open in IMG/M
3300005584|Ga0049082_10055009Not Available1396Open in IMG/M
3300005584|Ga0049082_10127289Not Available888Open in IMG/M
3300005584|Ga0049082_10182230Not Available722Open in IMG/M
3300005662|Ga0078894_10138787Not Available2175Open in IMG/M
3300005662|Ga0078894_10184095Not Available1887Open in IMG/M
3300005662|Ga0078894_10327082Not Available1389Open in IMG/M
3300005662|Ga0078894_10395811Not Available1248Open in IMG/M
3300005662|Ga0078894_10513049Not Available1075Open in IMG/M
3300005941|Ga0070743_10021303All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage2256Open in IMG/M
3300005941|Ga0070743_10080873Not Available1097Open in IMG/M
3300006484|Ga0070744_10004167Not Available4348Open in IMG/M
3300006484|Ga0070744_10083537Not Available925Open in IMG/M
3300006484|Ga0070744_10136739Not Available704Open in IMG/M
3300006484|Ga0070744_10164251Not Available635Open in IMG/M
3300006484|Ga0070744_10195262Not Available576Open in IMG/M
3300006484|Ga0070744_10221629Not Available536Open in IMG/M
3300007548|Ga0102877_1089549Not Available879Open in IMG/M
3300007559|Ga0102828_1060444Not Available891Open in IMG/M
3300007559|Ga0102828_1094178Not Available725Open in IMG/M
3300007562|Ga0102915_1121644Not Available853Open in IMG/M
3300007600|Ga0102920_1158782Not Available724Open in IMG/M
3300007630|Ga0102903_1226566Not Available506Open in IMG/M
3300008113|Ga0114346_1047962Not Available3333Open in IMG/M
3300008119|Ga0114354_1062630All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage1559Open in IMG/M
3300008121|Ga0114356_1000078Not Available50064Open in IMG/M
3300008261|Ga0114336_1107572Not Available1300Open in IMG/M
3300008450|Ga0114880_1261509Not Available532Open in IMG/M
3300008996|Ga0102831_1043308Not Available1514Open in IMG/M
3300009056|Ga0102860_1226731Not Available538Open in IMG/M
3300009180|Ga0114979_10773963Not Available539Open in IMG/M
3300013372|Ga0177922_10797882Not Available527Open in IMG/M
3300017766|Ga0181343_1010362Not Available3012Open in IMG/M
3300019784|Ga0181359_1138551Not Available849Open in IMG/M
3300019784|Ga0181359_1239180Not Available558Open in IMG/M
3300020205|Ga0211731_10434523Not Available1297Open in IMG/M
3300020527|Ga0208232_1025300Not Available830Open in IMG/M
3300020562|Ga0208597_1045326Not Available852Open in IMG/M
3300020562|Ga0208597_1070328Not Available617Open in IMG/M
3300021141|Ga0214163_1008238All Organisms → Viruses → Predicted Viral3587Open in IMG/M
3300021961|Ga0222714_10066076All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage2418Open in IMG/M
3300021961|Ga0222714_10115202Not Available1670Open in IMG/M
3300021961|Ga0222714_10389825Not Available738Open in IMG/M
3300021963|Ga0222712_10798417Not Available520Open in IMG/M
3300023184|Ga0214919_10077008Not Available2969Open in IMG/M
3300024343|Ga0244777_10024782Not Available3798Open in IMG/M
3300024343|Ga0244777_10095599Not Available1916Open in IMG/M
3300024346|Ga0244775_10003066All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage17938Open in IMG/M
3300024346|Ga0244775_10174504Not Available1809Open in IMG/M
3300024346|Ga0244775_10239476All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage1514Open in IMG/M
3300024346|Ga0244775_10357158Not Available1205Open in IMG/M
3300024346|Ga0244775_10372005Not Available1177Open in IMG/M
3300024346|Ga0244775_10434981Not Available1076Open in IMG/M
3300024346|Ga0244775_10557654Not Available932Open in IMG/M
3300024346|Ga0244775_10870123Not Available717Open in IMG/M
3300024346|Ga0244775_11016453Not Available653Open in IMG/M
3300024348|Ga0244776_10495542Not Available790Open in IMG/M
3300027186|Ga0208797_1021825Not Available858Open in IMG/M
3300027193|Ga0208800_1004340Not Available1762Open in IMG/M
3300027193|Ga0208800_1061376Not Available512Open in IMG/M
3300027196|Ga0208438_1031646Not Available892Open in IMG/M
3300027227|Ga0208929_1103765Not Available517Open in IMG/M
3300027304|Ga0208810_1063042Not Available795Open in IMG/M
3300027320|Ga0208923_1043484Not Available801Open in IMG/M
3300027468|Ga0209247_1000198Not Available7573Open in IMG/M
3300027563|Ga0209552_1175081Not Available542Open in IMG/M
3300027586|Ga0208966_1107520Not Available761Open in IMG/M
3300027586|Ga0208966_1141003Not Available642Open in IMG/M
3300027608|Ga0208974_1002134Not Available7471Open in IMG/M
3300027608|Ga0208974_1017929Not Available2225Open in IMG/M
3300027627|Ga0208942_1124230Not Available715Open in IMG/M
3300027656|Ga0209357_1010383All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage3469Open in IMG/M
3300027659|Ga0208975_1008893Not Available3525Open in IMG/M
3300027659|Ga0208975_1033301Not Available1636Open in IMG/M
3300027769|Ga0209770_10008134All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage4862Open in IMG/M
3300027772|Ga0209768_10269684Not Available729Open in IMG/M
3300027797|Ga0209107_10197733Not Available994Open in IMG/M
3300027798|Ga0209353_10145381Not Available1058Open in IMG/M
3300027836|Ga0209230_10458065Not Available726Open in IMG/M
3300027892|Ga0209550_10271499Not Available1108Open in IMG/M
3300028394|Ga0304730_1012542Not Available4890Open in IMG/M
3300031758|Ga0315907_10586470Not Available867Open in IMG/M
3300031786|Ga0315908_10225865Not Available1558Open in IMG/M
3300031786|Ga0315908_10739214Not Available808Open in IMG/M
3300031857|Ga0315909_10065747Not Available3269Open in IMG/M
3300031857|Ga0315909_10553647Not Available780Open in IMG/M
3300032092|Ga0315905_10246940All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage1734Open in IMG/M
3300032092|Ga0315905_10427422Not Available1237Open in IMG/M
3300032092|Ga0315905_11206528Not Available617Open in IMG/M
3300034013|Ga0334991_0067668Not Available1802Open in IMG/M
3300034068|Ga0334990_0005184Not Available7126Open in IMG/M
3300034107|Ga0335037_0012851Not Available4460Open in IMG/M



 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Freshwater LakeEnvironmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lake26.27%
EstuarineEnvironmental → Aquatic → Marine → Intertidal Zone → Estuary → Estuarine15.25%
Freshwater LenticEnvironmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lentic14.41%
EstuarineEnvironmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine14.41%
FreshwaterEnvironmental → Aquatic → Freshwater → Unclassified → Unclassified → Freshwater6.78%
FreshwaterEnvironmental → Aquatic → Freshwater → Lentic → Epilimnion → Freshwater4.24%
FreshwaterEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater3.39%
Freshwater, PlanktonEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater, Plankton3.39%
Estuarine WaterEnvironmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine Water3.39%
Freshwater And SedimentEnvironmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater And Sediment1.69%
Freshwater LakeEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake1.69%
FreshwaterEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater1.69%
Freshwater And SedimentEnvironmental → Aquatic → Freshwater → Lentic → Hypolimnion → Freshwater And Sediment0.85%
Freshwater LakeEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake0.85%
Freshwater And MarineEnvironmental → Aquatic → Freshwater → Lotic → Unclassified → Freshwater And Marine0.85%
Freshwater And MarineEnvironmental → Aquatic → Marine → Neritic Zone → Unclassified → Freshwater And Marine0.85%

Visualization
Powered by ApexCharts



Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300000882Freshwater microbial communities from the Columbia RiverEnvironmentalOpen in IMG/M
3300000929Marine plume microbial communities from the Columbia River - 15 PSUEnvironmentalOpen in IMG/M
3300001266Freshwater microbial communities from Lake Mendota, WI - 05MAY2010 deep hole epilimnionEnvironmentalOpen in IMG/M
3300002447Freshwater and sediment microbial communities from Lake Ontario - Sta 18 epilimnion MetagenomeEnvironmentalOpen in IMG/M
3300003277Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MM15.SDEnvironmentalOpen in IMG/M
3300003388Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MM110.SNEnvironmentalOpen in IMG/M
3300003393Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MM15.DDEnvironmentalOpen in IMG/M
3300003394Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MM15.SNEnvironmentalOpen in IMG/M
3300003488Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MM110.DNEnvironmentalOpen in IMG/M
3300004096Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MM15.SN (version 2)EnvironmentalOpen in IMG/M
3300004112Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MLB.SD (version 2)EnvironmentalOpen in IMG/M
3300004763Metatranscriptome of freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MM110.DD (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300004790Metatranscriptome of freshwater lake microbial communities from Lake Michigan, USA - Fa13.BD.MM15.SD (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300005517Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MM15.SN (version 4)EnvironmentalOpen in IMG/M
3300005580Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG MI27MSRFEnvironmentalOpen in IMG/M
3300005581Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG ER78MSRFEnvironmentalOpen in IMG/M
3300005582Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG ER15MSRFEnvironmentalOpen in IMG/M
3300005584Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG HU45MSRFEnvironmentalOpen in IMG/M
3300005662Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MLB.SD (version 4)EnvironmentalOpen in IMG/M
3300005941Estuarine microbial communities from the Columbia River estuary, USA - metaG S.697EnvironmentalOpen in IMG/M
3300006484Estuarine microbial communities from the Columbia River estuary, USA - metaG S.535EnvironmentalOpen in IMG/M
3300007548Estuarine microbial communities from the Columbia River estuary - metaG 1548B-3EnvironmentalOpen in IMG/M
3300007559Estuarine microbial communities from the Columbia River estuary - Freshwater metaG S.541EnvironmentalOpen in IMG/M
3300007562Estuarine microbial communities from the Columbia River estuary - metaG 1561A-02EnvironmentalOpen in IMG/M
3300007600Estuarine microbial communities from the Columbia River estuary - metaG 1568A-3EnvironmentalOpen in IMG/M
3300007630Estuarine microbial communities from the Columbia River estuary - metaG 1555C-02EnvironmentalOpen in IMG/M
3300008113Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE4, Sample E2014-0050-3-NAEnvironmentalOpen in IMG/M
3300008119Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE4, Sample E2014-0110-C-NAEnvironmentalOpen in IMG/M
3300008121Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE4, Sample HABS-E2014-0110-100-LTREnvironmentalOpen in IMG/M
3300008261Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE12, sample HABS-E2014-0024-C-NAEnvironmentalOpen in IMG/M
3300008450Freshwater viral communities during cyanobacterial harmful algal blooms (CHABs) in Western Lake Erie, USA - Oct 27, 2014 all contigsEnvironmentalOpen in IMG/M
3300008996Estuarine microbial communities from the Columbia River estuary - Freshwater metaG S.747EnvironmentalOpen in IMG/M
3300009056Estuarine microbial communities from the Columbia River estuary - metaG 1449A-3EnvironmentalOpen in IMG/M
3300009180Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_140625_EF_MetaGEnvironmentalOpen in IMG/M
3300013372Freshwater microbial communities from Lake Erie, Ontario, Canada. Combined Assembly of 10 SPsEnvironmentalOpen in IMG/M
3300017766Freshwater viral communities from Lake Michigan, USA - Su13.VD.MLB.S.DEnvironmentalOpen in IMG/M
3300019784Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MM15.S.DEnvironmentalOpen in IMG/M
3300020205Freshwater lake microbial communities from Lake Erken, Sweden - P4710_103 megahit1EnvironmentalOpen in IMG/M
3300020527Freshwater microbial communities from Lake Mendota, WI - 24AUG2012 deep hole epilimnion (SPAdes)EnvironmentalOpen in IMG/M
3300020562Freshwater microbial communities from Lake Mendota, WI - 05MAY2012 deep hole epilimnion (SPAdes)EnvironmentalOpen in IMG/M
3300021141Freshwater microbial communities from Lake Mendota, WI - Practice 15JUN2010 epilimnionEnvironmentalOpen in IMG/M
3300021961Estuarine water microbial communities from San Francisco Bay, California, United States - C33_3DEnvironmentalOpen in IMG/M
3300021963Estuarine water microbial communities from San Francisco Bay, California, United States - C33_657DEnvironmentalOpen in IMG/M
3300023184Freshwater microbial communities from Lake Lanier, Atlanta, Georgia, United States - LL-1503EnvironmentalOpen in IMG/M
3300024343Combined assembly of estuarine microbial communities from Columbia River, Washington, USA >3um size fractionEnvironmentalOpen in IMG/M
3300024346Whole water sample coassemblyEnvironmentalOpen in IMG/M
33000243480.2um to 3um size fraction coassemblyEnvironmentalOpen in IMG/M
3300027186Estuarine microbial communities from the Columbia River estuary - Ebb tide non-ETM metaG S.555 (SPAdes)EnvironmentalOpen in IMG/M
3300027193Estuarine microbial communities from the Columbia River estuary - Freshwater metaG S.541 (SPAdes)EnvironmentalOpen in IMG/M
3300027196Estuarine microbial communities from the Columbia River estuary - Flood tide non-ETM metaG S.545 (SPAdes)EnvironmentalOpen in IMG/M
3300027227Estuarine microbial communities from the Columbia River estuary - metaG 1548A-02 (SPAdes)EnvironmentalOpen in IMG/M
3300027304Estuarine microbial communities from the Columbia River estuary - metaG 1560A-02 (SPAdes)EnvironmentalOpen in IMG/M
3300027320Estuarine microbial communities from the Columbia River estuary - Freshwater metaG S.575 (SPAdes)EnvironmentalOpen in IMG/M
3300027468Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MM110.DN (SPAdes)EnvironmentalOpen in IMG/M
3300027563Freshwater lake microbial communities from Lake Michigan, USA - Fa13.BD.MM15.SD (SPAdes)EnvironmentalOpen in IMG/M
3300027586Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG HU45MSRF (SPAdes)EnvironmentalOpen in IMG/M
3300027608Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG ER15MSRF (SPAdes)EnvironmentalOpen in IMG/M
3300027627Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG SU08MSRF (SPAdes)EnvironmentalOpen in IMG/M
3300027656Freshwater lake microbial communities from Lake Michigan, USA - Fa13.BD.MM110.SD (SPAdes)EnvironmentalOpen in IMG/M
3300027659Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG ER78MSRF (SPAdes)EnvironmentalOpen in IMG/M
3300027769Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MLB.DD (SPAdes)EnvironmentalOpen in IMG/M
3300027772Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MM110.SD (SPAdes)EnvironmentalOpen in IMG/M
3300027797Freshwater microbial communities from dead zone in Lake Erie, Canada - CCB hypolimnion July 2011 (SPAdes)EnvironmentalOpen in IMG/M
3300027798Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MM15.SD (SPAdes)EnvironmentalOpen in IMG/M
3300027836Freshwater and sediment microbial communities from Lake Ontario - Sta 18 epilimnion Metagenome (SPAdes)EnvironmentalOpen in IMG/M
3300027892Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MM15.SN (SPAdes)EnvironmentalOpen in IMG/M
3300028394Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_130628_MF_MetaG (v2)EnvironmentalOpen in IMG/M
3300031758Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 12 MA123EnvironmentalOpen in IMG/M
3300031786Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 4 MA124EnvironmentalOpen in IMG/M
3300031857Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 2 MA125EnvironmentalOpen in IMG/M
3300032092Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 4 MA121EnvironmentalOpen in IMG/M
3300034013Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME07Jun2018-rr0034EnvironmentalOpen in IMG/M
3300034068Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME13Apr2016-rr0031EnvironmentalOpen in IMG/M
3300034107Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME21Apr2017-rr0133EnvironmentalOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap



 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
FwDRAFT_1009443413300000882Freshwater And MarineYAETLIKDFLAEGLNLYDISEIMQLPLSQILDILTKRIH*
NpDRAFT_1005967813300000929Freshwater And MarineMYQVNKGINVDYAETLIKDFLAEGLNLYDISEIMQLPLSQILDILTKRIH*
B570J13884_10180853300001266FreshwaterMYQVNKGINIDYAETLIKDFLAEGYNLYDIVDIMQIPLRQILDILTKRTH*
JGI24768J34885_1012785523300002447Freshwater And SedimentMYQVNKGINIDYADTLIRDFLAEGYNLYDISDIMHLPLGQILNILTRKLN*
JGI25908J49247_1001042533300003277Freshwater LakeMYQVNKGINVEYAETLIKDFLAEGLNLYDISEIMHLPLSQILDILTRRIH*
JGI25908J49247_1004915023300003277Freshwater LakeMYQVNKGINXDYAETLIKDFLAEGLNLYDISEIMQIPLRQILDILTKRIH*
JGI25908J49247_1006095733300003277Freshwater LakeVEYAETLIRDFIAEGLNLYEISDIMHLPLSQILDILTKRIH*
JGI25908J49247_1008006923300003277Freshwater LakeMYQVNKGINVDYAETLIKDFLAEGYNLYDISEIMHLPVRQILDILIRRIH*
JGI25910J50241_1002572723300003388Freshwater LakeMYQVNKGINVEYAETLIKDFLAEGLNLYDISEIMQIPLSQILDILTKRIH*
JGI25910J50241_1011655313300003388Freshwater LakeMYQVNKGINVEYAETLIRDFIAEGLNLYEISDIMHLPLSQILXILTKRIH*
JGI25909J50240_106501523300003393Freshwater LakeMYQVNKGINVXYAETLIKDFLAEGLNLYDISEIMXXPLSQILDILTKRIH*
JGI25909J50240_108814113300003393Freshwater LakeMYQVNKGINVDYAETLIKDFLAEGLNLYDISEIMQIPLRQILDILTKRIH*
JGI25907J50239_100746023300003394Freshwater LakeMYQVNKGINXDYAETLIKDFLAEGYNLYDIVDIMQIPLRQILDILTRRIN*
JGI25907J50239_103430923300003394Freshwater LakeMYQVNKGINVDYAETLIKDFLAEGLNLYDISEIMQIPLRQIXDILTKRIH*
JGI25919J51413_101199013300003488Freshwater LakeMYQVNKGINVEYAETLIKDFLAEGLNLYDISEIMQIPLSQILDILTKRI
Ga0066177_1051144023300004096Freshwater LakeMYQVNKGINIEYAETLIKDFLAEGYNLYDISEIMHLPVRQILDILTRRTH*
Ga0065166_1034198213300004112Freshwater LakeMYQVNKGINIDYAETLIRDFLAEGYNLYEITDLMHLPLRQILDILTRRIN*
Ga0007746_140464143300004763Freshwater LakeMYQVNKGINVEYAETLIRDFIAEGLNLYEISDIMHLPLSQILDILTKRIH*
Ga0007758_1116124823300004790Freshwater LakeMYQVNKGINVEYAETLIRDFIAEGLNLYEISDIMHLPLSQILDILTK
Ga0070374_1021051733300005517Freshwater LakeMYQVNKGINIDYAETLIKDFLAEGLNLYDISEIMHLPLSQILDILTRRIH*
Ga0049083_1010756923300005580Freshwater LenticMYQVNKGINVDYAETLIRDFLAEGLNLYEIMDLMQMPLRQILDILTKRIH*
Ga0049083_1027834623300005580Freshwater LenticMYQVNKGINIDYAETLIKDFLAEGLNLYDISEIMQMPLRQILDILTRRTH*
Ga0049081_1000386153300005581Freshwater LenticMYQVNKGINIDYAETLIKDFLAEGLNLYDISEIMQMPLRQILDILTKRIH*
Ga0049081_1001014663300005581Freshwater LenticMYQVNKGINVDYAETLIRDFLAEGYNLYEITDIMHLPLRQILEILTRRIH*
Ga0049081_1004436823300005581Freshwater LenticMYQVNKGINVYYAETLIKDFLAEGYNLYDISEIMHLPVRQILDILTKRIH*
Ga0049080_1001209223300005582Freshwater LenticMYQVNKGINMDYAETLIRDFLAEGYNLYEITDIMHLPLRQILEILTRKIH*
Ga0049080_1021997613300005582Freshwater LenticMYQVNKGINVDYAETLIKDFLAEGLNLYDISEIMQMPVRQILDILIRKIN*
Ga0049082_1005500933300005584Freshwater LenticMYQVNKGINVDYAETLIKDFLAEGLNLYDISEIMQMPLRQILDILTKRIH*
Ga0049082_1012728913300005584Freshwater LenticVYMYQVNKGINVEYAETLIKDFLAEGLNLYDISEIMQIPLSQILDILTKRIH*
Ga0049082_1018223023300005584Freshwater LenticMYQVNKGINVEYAETLIKDFLAEGLNLYDISEIMQIP
Ga0078894_1013878733300005662Freshwater LakeMYQVNKGINIDYAETLIKDFLAEGYTLYDIVDIMHLPLGQILNILTRKLN*
Ga0078894_1018409533300005662Freshwater LakeMYQVNKGINIDYAETLIKDFLAEGYNLYDISEIMHLPLRQILDILIRRTH*
Ga0078894_1032708213300005662Freshwater LakeIDYAETLIKDFLAEGYNLYDISEIMHLPLRQILDILTRRIN*
Ga0078894_1039581133300005662Freshwater LakeMYQVNKGINIDYAETLIKDFLAEGYNLYDIVDIMQIPLRQILDIL
Ga0078894_1051304933300005662Freshwater LakeMYQVNKGINIDYAETLIKDFLAEGYNLYDIVDIMQIPLRQILDILTRRIN*
Ga0070743_1002130313300005941EstuarineMYQVNKGINIDYAETLIKDFLAEGYTLYDIVDIMHLPLRQILDILTKRIH*
Ga0070743_1008087313300005941EstuarineVYMYQVNKGINIDYAETLIRDFLAEGYNLYEITDLMHLPLRQILDILTRKIH*
Ga0070744_1000416733300006484EstuarineMYQVNKGINVEYAETLIRDFISEGLNLYEISDIMHLPLSQILNILTRRIH*
Ga0070744_1008353723300006484EstuarineMYQVNKGINVDYAETLIKDFLAEGLNLYDISEIMQMPLSQILNILTRRTH*
Ga0070744_1013673923300006484EstuarineMYQVNKGINIDYAETLIRDFLAEGLNLYEIMDIMHLPLSQILDILTRKIH*
Ga0070744_1016425123300006484EstuarineMYQVNKGINIDYAETLIKDFLAEGLNLYEIMDIMQMPLRQILEILTRKIH*
Ga0070744_1019526223300006484EstuarineMYQVNKGINVEYAETLIRDFLAEGYNLYEITDLMHLPLRQILEILTRKIH*
Ga0070744_1022162923300006484EstuarineKGINIDYAETLIKDFLAEGYNLYDIVDIMQIPLRQILDILTRRIN*
Ga0102877_108954923300007548EstuarineYAETLIRDFLAEGYNLYEITDLMHLPLRQILEILTRKIH*
Ga0102828_106044433300007559EstuarineMYQVNKGINVEYAETLIRDFISEGLNLYEISDIMHLPLSQILNILTRR
Ga0102828_109417813300007559EstuarineNIDYAETLIKDFLAEGLNLYDISEIMQIPLSQILDILTRRTH*
Ga0102915_112164413300007562EstuarineLIRDFLAEGYNLYEITDLMHLPLRQILEILTRKIH*
Ga0102920_115878213300007600EstuarineMYQVNKGINVDYAETLIKDFLAEGLNLYDISEIMQIPLRQIL
Ga0102903_122656613300007630EstuarineMYQVNKGINVDYAETLIKDFLAEGLNLYDISEIMQIPLSQILDILTKRIH*
Ga0114346_104796273300008113Freshwater, PlanktonMYQVNKGINVDYAETLIKDFLAEGYNLYDISEIMHLPVRQILDILIRKIN*
Ga0114354_106263013300008119Freshwater, PlanktonMYQVNKGINVDYAETLIKDFLAEGLNLYDISEIMQIP
Ga0114356_1000078923300008121Freshwater, PlanktonMYQVNKGINIEYAETLIKDFLAEGYNLYDISEIMHLPVRQILDILIRKIN*
Ga0114336_110757213300008261Freshwater, PlanktonMYQVNKGINIDYADTLIRDFLAEGYNLYDISDIMHLPLGQILDILTRKIN*
Ga0114880_126150923300008450Freshwater LakeMYQVNKGINVDYAETLIKDFLAEGYNLYDISEIMHLPVRQILDILTKRIH*
Ga0102831_104330853300008996EstuarineVNKGINIDYAETLIRDFLAEGLNLYEIMDIMHLPLRQILDILTRRIN*
Ga0102860_122673123300009056EstuarineMYQVNKGINIDYAETLIRDFLAEGYNLYEITDLMQIPLRQILDILTRKIH*
Ga0114979_1077396323300009180Freshwater LakeMDYAETLIRDFLAEGYNLYEITDLMHLPLRQILEI
Ga0177922_1079788223300013372FreshwaterMYQVNKGINIDYAETLIKDFLAEGLNLYDISEIMQMPLRQILDILIRRIH*
Ga0181343_101036253300017766Freshwater LakeMYQVNKGINIDYAETLIKDFLAEGYNLYDIVDIMQIPLRQILDILIRRIH
Ga0181359_113855113300019784Freshwater LakeMYQVNKGINVEYAETLIRDFIAEGLNLYEISDIMHLPLSQILDILTKRIH
Ga0181359_123918013300019784Freshwater LakeMYQVNKGINVDYAETLIKDFLAEGLNLYDISEIMQIPLRQILDILTKRIH
Ga0211731_1043452343300020205FreshwaterMYQVNKGINIDYAETLIKDFLAEGYNLYDIVDIMQIPLRQILDILTRRTH
Ga0208232_102530023300020527FreshwaterMYQVNKGINVDYAETLIKDFLAEGYNLYDIVDIMQIPLRQILDILTKRIH
Ga0208597_104532623300020562FreshwaterMYQVNKGINVDYAETLIKDFLAEGLNLYDISEIMQMPLRQILDILTKRIH
Ga0208597_107032823300020562FreshwaterMYQVNKGINIDYAETLIKDFLAEGYNLYDIVDIMQIPLRQILDILTKRTH
Ga0214163_100823853300021141FreshwaterMYQVNKGINIDYAETLIKDFLAEGYNLYDISEIMHLPVRQILDILIRRIH
Ga0222714_1006607623300021961Estuarine WaterMYQVNKGINIDYAETLIKDFLAEGYNLYDISEIMHLPLSQILDILTRRIN
Ga0222714_1011520223300021961Estuarine WaterMYQVNKGINIDYADTLIKDFLAEGYNLYDISDIMHLPLSQILDILTRKLN
Ga0222714_1038982513300021961Estuarine WaterMYQVNKGINIDYAETLIKDFLAEGYNLYDIVDIMQIPLRQIL
Ga0222712_1079841723300021963Estuarine WaterMYQVNKGINIDYAETLIKDFLAEGYNLYDIVDIMHLPLSQILDILTRRIH
Ga0214919_1007700853300023184FreshwaterMYQVNKGINVDYAETLIRDFLAEGYNLYEITDLMHLPLRQILDILTRRIN
Ga0244777_1002478233300024343EstuarineMYQVNKGINVEYAETLIRDFISEGLNLYEISDIMHLPLSQILNILTRRIH
Ga0244777_1009559933300024343EstuarineMYQVNKGINVEYAETLIRDFLAEGYNLYEITDLMHLPLRQILEILTRKIH
Ga0244775_1000306623300024346EstuarineMYQVNKGINVDYAETLIRDFLAEGLNLYEIMDLMHLPLSQILDILTRRTH
Ga0244775_1017450463300024346EstuarineMYQVNKGINIDYAETLIKDFLAEGYTLYDIVDIMHLPLRQILDILTKRIH
Ga0244775_1023947633300024346EstuarineMYQVNKGINIDYAETLIKDFLAEGLNLYDVSEIMQIPLSQILDILTRRIH
Ga0244775_1035715813300024346EstuarineMYQVNKGINVDYAETLIRDFLAEGLNLYEIMDIMHLPLRQILDILTRRIN
Ga0244775_1037200523300024346EstuarineMYQVNKGINIDYAETLIRDFLAEGLNLYEIMDIMHLPLSQILDILTRKIH
Ga0244775_1043498133300024346EstuarineDINVEYAETLIRDFIAEGLNLYEISDIMHLPLSQILNILTRRIH
Ga0244775_1055765423300024346EstuarineMYQVNKGINIDYAETLIKDFLAEGLNLYEIMDIMQMPLRQILEILTRKIH
Ga0244775_1087012333300024346EstuarineNVDYAETLIRDFLAEGYNLYEITDLMHLPLRQILDILTRKIH
Ga0244775_1101645313300024346EstuarineMYQVNKDINVEYAETLIRDFIAEGLNLYEISDIMHLPLSQILNILTR
Ga0244776_1049554213300024348EstuarineMYQVNKGINVDYAETLIRDFLAEGLNLYEIMDLMHLPLSQ
Ga0208797_102182523300027186EstuarineMYQVNKDINVEYAETLIRDFIAEGLNLYEISDIMHLPLSQILNILTRRIH
Ga0208800_100434053300027193EstuarineMYQVNKGINIDYAETLIKDFLAEGYNLYDIVDIMQIPLRQILDILTKRIH
Ga0208800_106137623300027193EstuarineMYQVNKGINVEYAETLIRDFISEGLNLYEISDIMHLPLSQIL
Ga0208438_103164623300027196EstuarineMYQVNKGINVDYAETLIRDFLAEGLNLYEIMDLMQMPLRQILDILTKRIH
Ga0208929_110376513300027227EstuarineMYQVNKGINVDYAETLIRDFLAEGYNLYEITDLMHLPLRQILDILTRKIH
Ga0208810_106304223300027304EstuarineMYQVNKGINVEYAETLIRDFISEGLNLYEISDIMHLPLSQILNI
Ga0208923_104348423300027320EstuarineYAETLIRDFLAEGYNLYEITDLMHLPLRQILEILTRKIH
Ga0209247_1000198103300027468Freshwater LakeMYQVNKGINVEYAETLIKDFLAEGLNLYDISEIMQIPLSQILDILTKRIH
Ga0209552_117508113300027563Freshwater LakeMYQVNKGINVDYAETLIKDFLAEGLNLYDISEIMQIPLRQILD
Ga0208966_110752013300027586Freshwater LenticMYQVNKGINVDYAETLIKDFLAEGYNLYDISEIMHLPVRQILDILTKRIH
Ga0208966_114100323300027586Freshwater LenticMYQVNKGINVEYAETLIKDFLAEGLNLYDISEIMHLPLSQILDILTRRIH
Ga0208974_1002134133300027608Freshwater LenticMYQVNKGINIDYAETLIKDFLAEGLNLYDISEIMQMPLRQILDILTKRIH
Ga0208974_101792923300027608Freshwater LenticMYQVNKGINMDYAETLIRDFLAEGYNLYEITDIMHLPLRQILEILTRKIH
Ga0208942_112423023300027627Freshwater LenticMYQVNKGINIDYAETLIKDFLAEGLNLYDVSEIMQIPLSQILDILTRRT
Ga0209357_101038373300027656Freshwater LakeMYQVNKGINVDYAETLIRDFLAEGLNLYEIMDIMHLPLSQILDILTRKIH
Ga0208975_100889313300027659Freshwater LenticMYQVNKGINIDYAETLIKDFLAEGLNLYDISEIMQMPLRQILDILT
Ga0208975_103330123300027659Freshwater LenticMYQVNKGINVYYAETLIKDFLAEGYNLYDISEIMHLPVRQILDILTKRIH
Ga0209770_1000813493300027769Freshwater LakeMYQVNKGINIDYAETLIKDFLAEGYNLYDISEIMHLPLRQILDILIRRTH
Ga0209768_1026968423300027772Freshwater LakeMYQVNKGINIDYADTLIRDFLAEGYNLYDISDIMHLPLGQILDILTRKIN
Ga0209107_1019773333300027797Freshwater And SedimentMYQVNKGINVEYAETLIKDFLAEGLNLYDISEIMQI
Ga0209353_1014538123300027798Freshwater LakeMYQVNKGINVDYAETLIKDFLAEGYNLYDISEIMHLPVRQILDILIRRIH
Ga0209230_1045806513300027836Freshwater And SedimentMYQVNKGINIDYADTLIRDFLAEGYNLYDISDIMH
Ga0209550_1027149923300027892Freshwater LakeMYQVNKGINIEYAETLIKDFLAEGYNLYDISEIMHLPVRQILDILTRRTH
Ga0304730_101254293300028394Freshwater LakeMYQVNKGINVDYAETLIKDFLAEGLNLYDISEIMQIPVRQILDILIRKI
Ga0315907_1058647013300031758FreshwaterMYQVNKGINVDYAETLIKDFLAEGYNLYDISEIMHLPVRQILDILIRKIN
Ga0315908_1022586513300031786FreshwaterMYQVNKGINIDYAETLIKDFLAEGLNLYDISEIMQMPLRQILDILIRRIH
Ga0315908_1073921423300031786FreshwaterMYQVNKGINIDYAETLIKDFLAEGLNLYDISEIMQMPVRQILDILIRRTH
Ga0315909_1006574773300031857FreshwaterMYQVNKGINIDYADTLIRDFLAEGYNLYDISDIMHLPLRQILDILTRRIN
Ga0315909_1055364713300031857FreshwaterINVDYAETLIKDFLAEGLNLYDISEIMQIPLRQILDILTKRIH
Ga0315905_1024694013300032092FreshwaterMYQVNKGINVDYAETLIKDFLAEGLNLYDISEIMQIPLRQI
Ga0315905_1042742213300032092FreshwaterMYQVNKGINVEYAETLIKDFLAEGYNLYDISEIMHLPVR
Ga0315905_1120652823300032092FreshwaterMYQVNKGINIDYAETLIKDFLAEGLNLYDVSEIMQMPLSQILDILTKRIH
Ga0334991_0067668_329_4813300034013FreshwaterMYQVNKGINIDYAETLIKDFLAEGLNLYDISEIMQMPLRQILNILTKRIH
Ga0334990_0005184_6220_63723300034068FreshwaterMYQVNKGINIDYAETLIKDFLAEGYNLYDIVDIMQIPLRQILDILTKKTH
Ga0335037_0012851_1084_12363300034107FreshwaterMYQVNKGINIDYAETLIKDFLGEGYTLYDIVDIMQIPLRQILDILTKRTH


 ⦗Top⦘


© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.