NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome / Metatranscriptome Family F075890

Metagenome / Metatranscriptome Family F075890

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F075890
Family Type Metagenome / Metatranscriptome
Number of Sequences 118
Average Sequence Length 53 residues
Representative Sequence AHGGDLMVDDLKSAQPDDRHFVVPRRGHGEAVRAYIGRIDEATARLRRHPRQPD
Number of Associated Samples 100
Number of Associated Scaffolds 118

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 5.08 %
% of genes near scaffold ends (potentially truncated) 94.07 %
% of genes from short scaffolds (< 2000 bps) 82.20 %
Associated GOLD sequencing projects 94
AlphaFold2 3D model prediction Yes
3D model pTM-score0.44

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Bacteria (94.915 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil
(28.814 % of family members)
Environment Ontology (ENVO) Unclassified
(54.237 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(61.017 % of family members)


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Multiple Sequence Alignments

Select alignment to view:      

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 25.61%    β-sheet: 0.00%    Coil/Unstructured: 74.39%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.44
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 118 Family Scaffolds
PF07681DoxX 13.56
PF07676PD40 5.93
PF00210Ferritin 5.08
PF00072Response_reg 2.54
PF13462Thioredoxin_4 2.54
PF069833-dmu-9_3-mt 2.54
PF09335SNARE_assoc 2.54
PF09365DUF2461 2.54
PF12840HTH_20 2.54
PF02148zf-UBP 2.54
PF00578AhpC-TSA 1.69
PF04542Sigma70_r2 1.69
PF13360PQQ_2 1.69
PF12867DinB_2 1.69
PF04151PPC 0.85
PF13432TPR_16 0.85
PF02065Melibiase 0.85
PF16177ACAS_N 0.85
PF03703bPH_2 0.85
PF12680SnoaL_2 0.85
PF01402RHH_1 0.85
PF00486Trans_reg_C 0.85
PF01980TrmO 0.85
PF00115COX1 0.85
PF00144Beta-lactamase 0.85
PF00248Aldo_ket_red 0.85
PF13414TPR_11 0.85
PF01261AP_endonuc_2 0.85
PF00480ROK 0.85
PF14329DUF4386 0.85
PF12969DUF3857 0.85
PF07883Cupin_2 0.85
PF07726AAA_3 0.85
PF07690MFS_1 0.85
PF13231PMT_2 0.85
PF13188PAS_8 0.85
PF01047MarR 0.85
PF13492GAF_3 0.85
PF13365Trypsin_2 0.85
PF05685Uma2 0.85

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 118 Family Scaffolds
COG2259Uncharacterized membrane protein YphA, DoxX/SURF4 familyFunction unknown [S] 13.56
COG4270Uncharacterized membrane proteinFunction unknown [S] 13.56
COG0398Uncharacterized membrane protein YdjX, related to fungal oxalate transporter, TVP38/TMEM64 familyFunction unknown [S] 2.54
COG0586Membrane integrity protein DedA, putative transporter, DedA/Tvp38 familyCell wall/membrane/envelope biogenesis [M] 2.54
COG1238Uncharacterized membrane protein YqaA, VTT domainFunction unknown [S] 2.54
COG2764Zn-dependent glyoxalase, PhnB familyEnergy production and conversion [C] 2.54
COG3865Glyoxalase superfamily enzyme, possible 3-demethylubiquinone-9 3-methyltransferaseGeneral function prediction only [R] 2.54
COG5207Uncharacterized Zn-finger protein, UBP-typeGeneral function prediction only [R] 2.54
COG0568DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32)Transcription [K] 1.69
COG1191DNA-directed RNA polymerase specialized sigma subunitTranscription [K] 1.69
COG1595DNA-directed RNA polymerase specialized sigma subunit, sigma24 familyTranscription [K] 1.69
COG1940Sugar kinase of the NBD/HSP70 family, may contain an N-terminal HTH domainTranscription [K] 1.69
COG4941Predicted RNA polymerase sigma factor, contains C-terminal TPR domainTranscription [K] 1.69
COG1680CubicO group peptidase, beta-lactamase class C familyDefense mechanisms [V] 0.85
COG1686D-alanyl-D-alanine carboxypeptidaseCell wall/membrane/envelope biogenesis [M] 0.85
COG1720tRNA (Thr-GGU) A37 N6-methylaseTranslation, ribosomal structure and biogenesis [J] 0.85
COG2367Beta-lactamase class ADefense mechanisms [V] 0.85
COG3345Alpha-galactosidaseCarbohydrate transport and metabolism [G] 0.85
COG3402Uncharacterized membrane protein YdbS, contains bPH2 (bacterial pleckstrin homology) domainFunction unknown [S] 0.85
COG3428Uncharacterized membrane protein YdbT, contains bPH2 (bacterial pleckstrin homology) domainFunction unknown [S] 0.85
COG4636Endonuclease, Uma2 family (restriction endonuclease fold)General function prediction only [R] 0.85

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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms94.92 %
UnclassifiedrootN/A5.08 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300002558|JGI25385J37094_10140881All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes657Open in IMG/M
3300002562|JGI25382J37095_10236182All Organisms → cellular organisms → Bacteria552Open in IMG/M
3300002908|JGI25382J43887_10034191All Organisms → cellular organisms → Bacteria2752Open in IMG/M
3300002908|JGI25382J43887_10206463All Organisms → cellular organisms → Bacteria940Open in IMG/M
3300002908|JGI25382J43887_10387328All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium590Open in IMG/M
3300002914|JGI25617J43924_10035187All Organisms → cellular organisms → Bacteria → Acidobacteria1797Open in IMG/M
3300003319|soilL2_10086579All Organisms → cellular organisms → Bacteria1255Open in IMG/M
3300005171|Ga0066677_10030786All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes2568Open in IMG/M
3300005172|Ga0066683_10819021All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium540Open in IMG/M
3300005174|Ga0066680_10281180All Organisms → cellular organisms → Bacteria1061Open in IMG/M
3300005176|Ga0066679_10070453All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales2066Open in IMG/M
3300005180|Ga0066685_10428680All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium918Open in IMG/M
3300005181|Ga0066678_10042527All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium2549Open in IMG/M
3300005186|Ga0066676_10441963All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium880Open in IMG/M
3300005187|Ga0066675_10397147All Organisms → cellular organisms → Bacteria1017Open in IMG/M
3300005444|Ga0070694_100981646All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium700Open in IMG/M
3300005445|Ga0070708_100097297All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium2690Open in IMG/M
3300005446|Ga0066686_10387366All Organisms → cellular organisms → Bacteria955Open in IMG/M
3300005446|Ga0066686_10397031All Organisms → cellular organisms → Bacteria942Open in IMG/M
3300005447|Ga0066689_10206768All Organisms → cellular organisms → Bacteria1194Open in IMG/M
3300005468|Ga0070707_100365703All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium1401Open in IMG/M
3300005540|Ga0066697_10627605All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium593Open in IMG/M
3300005553|Ga0066695_10002997All Organisms → cellular organisms → Bacteria7472Open in IMG/M
3300005553|Ga0066695_10517005All Organisms → cellular organisms → Bacteria731Open in IMG/M
3300005568|Ga0066703_10603263All Organisms → cellular organisms → Bacteria639Open in IMG/M
3300005574|Ga0066694_10516620All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium557Open in IMG/M
3300005586|Ga0066691_10431392All Organisms → cellular organisms → Bacteria786Open in IMG/M
3300006034|Ga0066656_10108701All Organisms → cellular organisms → Bacteria1693Open in IMG/M
3300006797|Ga0066659_10394664All Organisms → cellular organisms → Bacteria → Proteobacteria1086Open in IMG/M
3300006903|Ga0075426_10436709All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium968Open in IMG/M
3300006904|Ga0075424_101863953All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes636Open in IMG/M
3300007258|Ga0099793_10021890All Organisms → cellular organisms → Bacteria2635Open in IMG/M
3300009012|Ga0066710_103120144All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium640Open in IMG/M
3300009012|Ga0066710_103649221All Organisms → cellular organisms → Bacteria580Open in IMG/M
3300009012|Ga0066710_104165223All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium540Open in IMG/M
3300009038|Ga0099829_11297682All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes602Open in IMG/M
3300009137|Ga0066709_102962194All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium624Open in IMG/M
3300009162|Ga0075423_10221528All Organisms → cellular organisms → Bacteria1983Open in IMG/M
3300010117|Ga0127449_1127114All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes529Open in IMG/M
3300010141|Ga0127499_1055757All Organisms → cellular organisms → Bacteria1045Open in IMG/M
3300010321|Ga0134067_10034032All Organisms → cellular organisms → Bacteria1590Open in IMG/M
3300010323|Ga0134086_10283376All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → Ktedonobacterales → Dictyobacteraceae → Dictyobacter639Open in IMG/M
3300010362|Ga0126377_12725352All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes569Open in IMG/M
3300010401|Ga0134121_11655696All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium661Open in IMG/M
3300010403|Ga0134123_11512406Not Available716Open in IMG/M
3300010905|Ga0138112_1117915All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes533Open in IMG/M
3300011269|Ga0137392_10621687All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes896Open in IMG/M
3300011444|Ga0137463_1210049All Organisms → cellular organisms → Bacteria729Open in IMG/M
3300012096|Ga0137389_10388876All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium1190Open in IMG/M
3300012199|Ga0137383_10130384All Organisms → cellular organisms → Bacteria1836Open in IMG/M
3300012199|Ga0137383_10318141All Organisms → cellular organisms → Bacteria → Acidobacteria1139Open in IMG/M
3300012199|Ga0137383_10320604All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes1135Open in IMG/M
3300012200|Ga0137382_10113987All Organisms → cellular organisms → Bacteria1798Open in IMG/M
3300012204|Ga0137374_10599779All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium840Open in IMG/M
3300012206|Ga0137380_10289740All Organisms → cellular organisms → Bacteria1468Open in IMG/M
3300012207|Ga0137381_10085220All Organisms → cellular organisms → Bacteria2660Open in IMG/M
3300012207|Ga0137381_11478148All Organisms → cellular organisms → Bacteria571Open in IMG/M
3300012208|Ga0137376_10547022All Organisms → cellular organisms → Bacteria1003Open in IMG/M
3300012211|Ga0137377_10956997Not Available787Open in IMG/M
3300012211|Ga0137377_11944957Not Available505Open in IMG/M
3300012285|Ga0137370_10332760All Organisms → cellular organisms → Bacteria911Open in IMG/M
3300012350|Ga0137372_10727664All Organisms → cellular organisms → Bacteria716Open in IMG/M
3300012351|Ga0137386_10206768All Organisms → cellular organisms → Bacteria → Proteobacteria1410Open in IMG/M
3300012354|Ga0137366_10753887All Organisms → cellular organisms → Bacteria692Open in IMG/M
3300012359|Ga0137385_10286503All Organisms → cellular organisms → Bacteria → Proteobacteria1420Open in IMG/M
3300012374|Ga0134039_1076298All Organisms → cellular organisms → Bacteria699Open in IMG/M
3300012392|Ga0134043_1311470All Organisms → cellular organisms → Bacteria1535Open in IMG/M
3300012398|Ga0134051_1049801All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes549Open in IMG/M
3300012403|Ga0134049_1216881All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes576Open in IMG/M
3300012685|Ga0137397_10100755All Organisms → cellular organisms → Bacteria2117Open in IMG/M
3300012685|Ga0137397_10207091All Organisms → cellular organisms → Bacteria1459Open in IMG/M
3300012923|Ga0137359_10203904All Organisms → cellular organisms → Bacteria1766Open in IMG/M
3300012925|Ga0137419_11546834All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes563Open in IMG/M
3300012930|Ga0137407_12153835All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → Ktedonobacterales → Dictyobacteraceae → Dictyobacter533Open in IMG/M
3300012976|Ga0134076_10206886All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium825Open in IMG/M
3300014154|Ga0134075_10117896All Organisms → cellular organisms → Bacteria1126Open in IMG/M
3300014154|Ga0134075_10318418All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium678Open in IMG/M
3300014157|Ga0134078_10048671All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis1459Open in IMG/M
3300015051|Ga0137414_1192392All Organisms → cellular organisms → Bacteria2643Open in IMG/M
3300015053|Ga0137405_1082298All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium1633Open in IMG/M
3300015054|Ga0137420_1402222All Organisms → cellular organisms → Bacteria5156Open in IMG/M
3300015241|Ga0137418_10072270All Organisms → cellular organisms → Bacteria3143Open in IMG/M
3300015241|Ga0137418_11068625All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes577Open in IMG/M
3300015358|Ga0134089_10170008All Organisms → cellular organisms → Bacteria867Open in IMG/M
3300015358|Ga0134089_10474915All Organisms → cellular organisms → Bacteria544Open in IMG/M
3300017654|Ga0134069_1343499All Organisms → cellular organisms → Bacteria536Open in IMG/M
3300017656|Ga0134112_10168741All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium847Open in IMG/M
3300017656|Ga0134112_10295966All Organisms → cellular organisms → Bacteria650Open in IMG/M
3300017657|Ga0134074_1367045All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium533Open in IMG/M
3300018060|Ga0187765_10039945All Organisms → cellular organisms → Bacteria → Proteobacteria2367Open in IMG/M
3300018063|Ga0184637_10167547All Organisms → cellular organisms → Bacteria1353Open in IMG/M
3300018078|Ga0184612_10166150All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes1152Open in IMG/M
3300018431|Ga0066655_10433060All Organisms → cellular organisms → Bacteria868Open in IMG/M
3300018482|Ga0066669_10072912All Organisms → cellular organisms → Bacteria → Proteobacteria2277Open in IMG/M
3300018482|Ga0066669_10142047All Organisms → cellular organisms → Bacteria1751Open in IMG/M
3300024330|Ga0137417_1379472All Organisms → cellular organisms → Bacteria2436Open in IMG/M
3300025986|Ga0207658_10160396Not Available1843Open in IMG/M
3300026295|Ga0209234_1001565All Organisms → cellular organisms → Bacteria → Proteobacteria8613Open in IMG/M
3300026296|Ga0209235_1169803All Organisms → cellular organisms → Bacteria826Open in IMG/M
3300026297|Ga0209237_1044067All Organisms → cellular organisms → Bacteria2306Open in IMG/M
3300026298|Ga0209236_1180174All Organisms → cellular organisms → Bacteria835Open in IMG/M
3300026301|Ga0209238_1008855All Organisms → cellular organisms → Bacteria3973Open in IMG/M
3300026301|Ga0209238_1068923All Organisms → cellular organisms → Bacteria1246Open in IMG/M
3300026306|Ga0209468_1117394Not Available802Open in IMG/M
3300026307|Ga0209469_1086828All Organisms → cellular organisms → Bacteria917Open in IMG/M
3300026310|Ga0209239_1186223All Organisms → cellular organisms → Bacteria773Open in IMG/M
3300026323|Ga0209472_1190994All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium716Open in IMG/M
3300026327|Ga0209266_1293098All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium512Open in IMG/M
3300026328|Ga0209802_1004991All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis8598Open in IMG/M
3300026524|Ga0209690_1284859All Organisms → cellular organisms → Bacteria522Open in IMG/M
3300026528|Ga0209378_1008089All Organisms → cellular organisms → Bacteria6576Open in IMG/M
3300026557|Ga0179587_10292051All Organisms → cellular organisms → Bacteria1049Open in IMG/M
3300027061|Ga0209729_1053363Not Available515Open in IMG/M
3300027882|Ga0209590_10219594All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes1206Open in IMG/M
3300027882|Ga0209590_10805205All Organisms → cellular organisms → Bacteria597Open in IMG/M
3300028828|Ga0307312_10049452All Organisms → cellular organisms → Bacteria2507Open in IMG/M
3300032205|Ga0307472_101793355All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium609Open in IMG/M
3300034176|Ga0364931_0316411All Organisms → cellular organisms → Bacteria519Open in IMG/M


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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil28.81%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil21.19%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil16.95%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil16.10%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere2.54%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere2.54%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment1.69%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil1.69%
SoilEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Soil0.85%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil0.85%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil0.85%
Sugarcane Root And Bulk SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Sugarcane Root And Bulk Soil0.85%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil0.85%
Tropical PeatlandEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland0.85%
SoilEnvironmental → Terrestrial → Soil → Loam → Grasslands → Soil0.85%
Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil0.85%
SedimentEnvironmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment0.85%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere0.85%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300002558Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_1_40cmEnvironmentalOpen in IMG/M
3300002562Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_40cmEnvironmentalOpen in IMG/M
3300002908Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_40cmEnvironmentalOpen in IMG/M
3300002914Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cmEnvironmentalOpen in IMG/M
3300003319Sugarcane bulk soil Sample L2EnvironmentalOpen in IMG/M
3300005171Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_126EnvironmentalOpen in IMG/M
3300005172Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132EnvironmentalOpen in IMG/M
3300005174Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129EnvironmentalOpen in IMG/M
3300005176Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128EnvironmentalOpen in IMG/M
3300005180Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134EnvironmentalOpen in IMG/M
3300005181Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127EnvironmentalOpen in IMG/M
3300005186Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125EnvironmentalOpen in IMG/M
3300005187Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124EnvironmentalOpen in IMG/M
3300005444Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaGEnvironmentalOpen in IMG/M
3300005445Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaGEnvironmentalOpen in IMG/M
3300005446Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135EnvironmentalOpen in IMG/M
3300005447Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138EnvironmentalOpen in IMG/M
3300005468Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaGEnvironmentalOpen in IMG/M
3300005540Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_146EnvironmentalOpen in IMG/M
3300005553Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_144EnvironmentalOpen in IMG/M
3300005568Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_152EnvironmentalOpen in IMG/M
3300005574Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_143EnvironmentalOpen in IMG/M
3300005586Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140EnvironmentalOpen in IMG/M
3300006034Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_105EnvironmentalOpen in IMG/M
3300006797Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108EnvironmentalOpen in IMG/M
3300006903Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD5Host-AssociatedOpen in IMG/M
3300006904Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3Host-AssociatedOpen in IMG/M
3300007258Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3EnvironmentalOpen in IMG/M
3300009012Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159EnvironmentalOpen in IMG/M
3300009038Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaGEnvironmentalOpen in IMG/M
3300009137Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158EnvironmentalOpen in IMG/M
3300009162Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2Host-AssociatedOpen in IMG/M
3300010117Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Wat_40_2_4_2 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300010141Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Met_40_5_8_2 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300010321Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09212015EnvironmentalOpen in IMG/M
3300010323Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_40cm_2_24_1 metaGEnvironmentalOpen in IMG/M
3300010362Tropical forest soil microbial communities from Panama - MetaG Plot_22EnvironmentalOpen in IMG/M
3300010401Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1EnvironmentalOpen in IMG/M
3300010403Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3EnvironmentalOpen in IMG/M
3300010905Grasslands soil microbial communities from Angelo Coastal Reserve, California, USA - 15_R_Wat_40_2_8_1 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300011269Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaGEnvironmentalOpen in IMG/M
3300011444Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT800_2EnvironmentalOpen in IMG/M
3300012096Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaGEnvironmentalOpen in IMG/M
3300012199Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaGEnvironmentalOpen in IMG/M
3300012200Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaGEnvironmentalOpen in IMG/M
3300012204Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_100_16 metaGEnvironmentalOpen in IMG/M
3300012206Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaGEnvironmentalOpen in IMG/M
3300012207Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaGEnvironmentalOpen in IMG/M
3300012208Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaGEnvironmentalOpen in IMG/M
3300012211Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaGEnvironmentalOpen in IMG/M
3300012285Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_20_16 metaGEnvironmentalOpen in IMG/M
3300012350Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_60_16 metaGEnvironmentalOpen in IMG/M
3300012351Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_100_16 metaGEnvironmentalOpen in IMG/M
3300012354Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_60_16 metaGEnvironmentalOpen in IMG/M
3300012359Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaGEnvironmentalOpen in IMG/M
3300012374Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_20cm_5_8_2 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300012392Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_2_4_1 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300012398Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_2_24_2 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300012403Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_2_8_2 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300012685Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaGEnvironmentalOpen in IMG/M
3300012923Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaGEnvironmentalOpen in IMG/M
3300012925Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012930Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012976Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_5_0_1 metaGEnvironmentalOpen in IMG/M
3300014154Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09212015EnvironmentalOpen in IMG/M
3300014157Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_20cm_2_24_1 metaGEnvironmentalOpen in IMG/M
3300015051Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (PacBio error correction)EnvironmentalOpen in IMG/M
3300015053Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (PacBio error correction)EnvironmentalOpen in IMG/M
3300015054Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (PacBio error correction)EnvironmentalOpen in IMG/M
3300015241Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300015358Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_40cm_5_24_1 metaGEnvironmentalOpen in IMG/M
3300017654Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_2_24_1 metaGEnvironmentalOpen in IMG/M
3300017656Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_11112015EnvironmentalOpen in IMG/M
3300017657Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09212015EnvironmentalOpen in IMG/M
3300018060Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_10_MGEnvironmentalOpen in IMG/M
3300018063Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_127_b2EnvironmentalOpen in IMG/M
3300018078Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_60_coexEnvironmentalOpen in IMG/M
3300018431Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104EnvironmentalOpen in IMG/M
3300018482Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118EnvironmentalOpen in IMG/M
3300024330Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (PacBio error correction)EnvironmentalOpen in IMG/M
3300025986Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300026295Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_20cm (SPAdes)EnvironmentalOpen in IMG/M
3300026296Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_20cm (SPAdes)EnvironmentalOpen in IMG/M
3300026297Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_1_40cm (SPAdes)EnvironmentalOpen in IMG/M
3300026298Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_1_40cm (SPAdes)EnvironmentalOpen in IMG/M
3300026301Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_1_20cm (SPAdes)EnvironmentalOpen in IMG/M
3300026306Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_102 (SPAdes)EnvironmentalOpen in IMG/M
3300026307Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_123 (SPAdes)EnvironmentalOpen in IMG/M
3300026310Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_2_20cm (SPAdes)EnvironmentalOpen in IMG/M
3300026323Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_130 (SPAdes)EnvironmentalOpen in IMG/M
3300026327Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132 (SPAdes)EnvironmentalOpen in IMG/M
3300026328Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129 (SPAdes)EnvironmentalOpen in IMG/M
3300026524Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150 (SPAdes)EnvironmentalOpen in IMG/M
3300026528Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156 (SPAdes)EnvironmentalOpen in IMG/M
3300026557Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungalEnvironmentalOpen in IMG/M
3300027061Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM1H0_M3 (SPAdes)EnvironmentalOpen in IMG/M
3300027882Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300028828Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_202EnvironmentalOpen in IMG/M
3300032205Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05EnvironmentalOpen in IMG/M
3300034176Sediment microbial communities from East River floodplain, Colorado, United States - 21_j17EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
JGI25385J37094_1014088113300002558Grasslands SoilAVEGHGGDLMVDDLRSPEPDDAHFVVPRRDHGEAVRAYIGRIDDATAQLRRHPRHTD*
JGI25382J37095_1023618213300002562Grasslands SoilMVDDLKSPQPDDRHFVLPRRERGESIRAYIIRIDGATEGLRRHPRRPD*
JGI25382J43887_1003419113300002908Grasslands SoilMVDDLKSSRPDDRHFVVPRRAHGEAVRTYIVRIDEATTQLRRHPPQPD*
JGI25382J43887_1020646313300002908Grasslands SoilAHGGDLMVDDLKSREPDDRHFVLPRRGKGEAVRAYMGRIDDATARLRQHPRRPD*
JGI25382J43887_1038732813300002908Grasslands SoilFEAAVEAHGGDLMVDDLKSSRPDDRHFVVPRRAHGEAVRTYIGRIDEATAQLRRHPRQPD
JGI25617J43924_1003518713300002914Grasslands SoilMVDDLKSSQPDDPHFVLPRRERGDTVRAYIGRIDEATARLRKHPRQRD*
soilL2_1008657913300003319Sugarcane Root And Bulk SoilLFVDDLKSSRPDDRRFVVPRRLTGEPIRSYLRRVDEATAQLRGAVPPR*
Ga0066677_1003078613300005171SoilFEAAVEAHGGDLMVDDLKSSRPDDRHFVVPRRAPREAARAYIGRIDAATAGLRRHPRQRD
Ga0066683_1081902113300005172SoilDLMVDDLKSSRPDDRHFVVPRRARGEALRTYIGRIDEATARLRAHPRQPD*
Ga0066680_1028118013300005174SoilDLMVDDLKSSRPDDQHFVVPRRAHGEAMRTYIARIDEATARLRRHPRRPV*
Ga0066679_1007045333300005176SoilAVEAHGGDLMVDDLKSSRPDDRHFVMPRRVPREAVRAYIARIDAARLTLGPHPRRADP*
Ga0066685_1042868013300005180SoilVVEAHGGDLMVDDLKSSQPDDSHFVVPRRGHGETVRAYVVRIDEAAARLRGHPRQPD*
Ga0066678_1004252733300005181SoilDLMVDDLRSPEPDDAHFVVPRRDHGEAVRAYIGRIDDATAQLRRHPRHTD*
Ga0066676_1044196313300005186SoilVVEAHGGDLMVDDLKSSQPDDSHFVVPRRGHGETVRAYVVRIDEAAARLRGHPRKPD*
Ga0066675_1039714733300005187SoilAHGGDLMVDDLKSAQPDDRHFVVPRRGHGEAVRAYIGRIDEATARLRRHPRQPD*
Ga0070694_10098164613300005444Corn, Switchgrass And Miscanthus RhizosphereDLMVDDLKSSQPDDRHFVVPRRGPGETVRAYVVRIDEAAGRLRRHPRKPD*
Ga0070708_10009729713300005445Corn, Switchgrass And Miscanthus RhizosphereDLMVDDLKSSQPDDRHFVVPRRGHGETVRAYVVRIDEAAARLRGHPRKPD*
Ga0066686_1038736623300005446SoilAVEAHGGDLMVDDLKSSRPDDPHFVVPRRAPNEGVRAYIGRIDQATGDLRRHPRRPD*
Ga0066686_1039703113300005446SoilVEAHGGDLMVDDLKSSRPDDQHFVVPRRAHGEAMRTYIARIDEATARLRRHPRRPD*
Ga0066689_1020676813300005447SoilAVEAHGGDLMVDDLKSAEPDDRHFVVPRRAHGEAVRKYIGRIDEATAQLRRHPRQRD*
Ga0070707_10036570323300005468Corn, Switchgrass And Miscanthus RhizosphereHGGDLMVDDLKSSRPDDPHFVVPRRNEGESLPSYTTRIEAATARLRRYPSLDDGVPPTQH
Ga0066697_1062760523300005540SoilVVEAHGGDLMVDDLKSSQPDDSHFVVPRRGHGENVRAYVVRIDEAAARLRAHPRKPD*
Ga0066695_1000299743300005553SoilGDLMVDDLKSSRPDDQHFVVPRRAHGEAMRTYIARIDEATARLRRHPRRPD*
Ga0066695_1051700513300005553SoilGDLMVDDLKSTQPDDRHFVVPRRARGETVRAYIVRIDEAAAELRRHPRQPD*
Ga0066703_1060326333300005568SoilAHGGDLMVDDLKSAEPDDRHFVVPRRAHGEAVRKYIGRIDEATAQLRRHPRQRD*
Ga0066694_1051662023300005574SoilGGDLMVDDLKAREPDDPHFVLPRRARGEATRAYIVRIDAATLHLRKHPRRPDSAV*
Ga0066691_1043139213300005586SoilHGGDLMVDDLKSVQPDDAHFVLPRRNTGEAVRAYIGRIVAATAKLRDHPRKRD*
Ga0066656_1010870143300006034SoilRFEGVVEAHGGDLMVDDLKSSQPDDSHFVVPRRGHGENVRAYVVRIDEAAARLRAHPRKPD*
Ga0066659_1039466433300006797SoilGDLMVDDLKSAQPDDRHFVVPRRAHAEPVRTYIGRIDEATAQLHRHPRQPDR*
Ga0075426_1043670923300006903Populus RhizosphereLMVDDLKSSQPDDSHFVVPRRGHGETVRAYVVRIDEAAARLRGHPRKPD*
Ga0075424_10186395323300006904Populus RhizosphereVDDLKSSEPDDRHFVVPRRESGESIRSYIGRIDDATVQLRRHPPQAD*
Ga0099793_1002189053300007258Vadose Zone SoilGHGGDLMVDDLKSSRPDDRHFVVPRRAPGEAVRAYIRRIDEATAQLRRHPRQPD*
Ga0066710_10312014423300009012Grasslands SoilDLMVDDLKSRDPDDPHFVLPRRERSEAIRAYIARVDQATHRLRSHPRRPDGAA
Ga0066710_10364922113300009012Grasslands SoilDLMVDDLKSAEPDDQHFVLPRRGRGESIRPYIARIDQATRRLRSHLRRPDDAG
Ga0066710_10416522323300009012Grasslands SoilVEAHGGDLMVDDLKSAEPDDRHFVVPRRAHGEAVQKYIGRIDEATAQLRRHPRQRD
Ga0099829_1129768223300009038Vadose Zone SoilAHGGDLMVDDLKSSQPDDRHFVVPRRGPGETVRAYVVRIDEAAARLRGHPRKPD*
Ga0066709_10296219423300009137Grasslands SoilGGDLMVDDLKSAEPDDRHFVVPRRAHGEAVRKYIGRIDEATAQLRRHPRQRD*
Ga0075423_1022152813300009162Populus RhizosphereAVVEAHGGDLMVDDLKSSQPDDSHFVVPRRGHGETVRAYVVRIDEAAARLRGHPRKPD*
Ga0127449_112711413300010117Grasslands SoilVEGHGGDLMVDDLRSPEPDDAHFVVPRRDHGEAVRAYIGRIDDATAQLRRHPRHTD*
Ga0127499_105575733300010141Grasslands SoilMVDDLRSSQPDDPHYVVPRRALGEGTRAYIARIDAATAGLRRHPRRPD*
Ga0134067_1003403213300010321Grasslands SoilFEAAVEAHGGDLMVDDLKSSRPDDRHFVVPRRAPREAVRAYISRVDAATAGLRRHPRQRD
Ga0134086_1028337623300010323Grasslands SoilVDDLKSSRPDDRHFVLPRRAQAESARAYMVRIDEAALALRRHPRHPG*
Ga0126377_1272535213300010362Tropical Forest SoilDLMVDDLKSSQPDDRHFVVPRRDRGESIPAYIGRIDDATARLRRHPQQPD*
Ga0134121_1165569623300010401Terrestrial SoilVVEAHGGDLMVDDLKSSQPDDRHFVVPRRGPGETVRAYVVRIDEAAGRLRRHPRKPD*
Ga0134123_1151240633300010403Terrestrial SoilVEAHGGDLMVDDLKSVQPDDRHFVLPRRDHAEPIRAYIGRISAATSGLRKHPRHPDT*
Ga0138112_111791513300010905Grasslands SoilEAAVEGHGGDLMVDDLRSPEPDDAHFVVPRRDHGEAVRAYIGRIDDATAQLRRHPRHTD*
Ga0137392_1062168723300011269Vadose Zone SoilEAHGGDLMVDDLKSSQPDDSHFVVPRRGHGETVRAYVVRIDEAAARLRGHPRQTD*
Ga0137463_121004913300011444SoilDLMVDDLKSSRPDDQHFVVPRRAHGEVVRTYIARIDEATARLRHHPRRPD*
Ga0137389_1038887633300012096Vadose Zone SoilAAVEAHGGDLMVDDLKSVQPDDAHFMLPLRSKSEAIRAYIGRIVEATAKLRDHPRKPD*
Ga0137383_1013038413300012199Vadose Zone SoilMVDDLKSSQPDDSHFVVPRRGHGETVRAYVVRIDEAAARLRGHPRKPD*
Ga0137383_1031814113300012199Vadose Zone SoilHGGDLMVDDLKSSRPDDRHFVVPRRAHGEAVRTYIVRIDEATAQLRRHPPRPD*
Ga0137383_1032060413300012199Vadose Zone SoilMVDDLKSSQPDDSHFVVPRRGHGETVRAYVVRIDEAAARLRSHPRKPD*
Ga0137382_1011398713300012200Vadose Zone SoilHGGDLMVDDLKSSLPDDVHFVVPRRARGEAVHSYIVRIVEAAARLGDHPRHPD*
Ga0137374_1059977923300012204Vadose Zone SoilVVEAHGGDLMVDDLRSSRPDDSHFVVPRRGHGEAVRAYVTRIDEATAQLRRHPRQPD*
Ga0137380_1028974043300012206Vadose Zone SoilMVDDLKSRDPDDPHFVLPRRERSEAIRAYIARVDQATHRLRSHPRRPDGAA*
Ga0137381_1008522043300012207Vadose Zone SoilHGGDLMVDDLKSVEPDDRHFVVPRRAHAEPVRTYIGRIDEATVQLRRHPRQPDR*
Ga0137381_1147814813300012207Vadose Zone SoilLMVDSLKSPQPDDVHFVLPRREPHEAIRAYIGRVDAATTQVRRHPRHPE*
Ga0137376_1054702233300012208Vadose Zone SoilVDDLKAREPDDPHFVLPRRARGEAARAYIARIDEATLRLRKHPRRPDGAA*
Ga0137377_1095699723300012211Vadose Zone SoilVEAHGGDLMVDDLKSSRPDDSHFVMPRRVPREAVRAYIGRIDAARLALGHHPRRADP*
Ga0137377_1194495723300012211Vadose Zone SoilVEAHGGDLMVDDLKSSRPDDSHFVMPRRVPREAVQAYITRIDAARAGLGRHPRRPD*
Ga0137370_1033276013300012285Vadose Zone SoilDLKSSRPDDVHFVVPRRARGEAVHSYIVRIVDAADRLGQHPRHPD*
Ga0137372_1072766413300012350Vadose Zone SoilGGDLMVDDLKSAEPDDRHFVVPRRAHGEAARTYVGRIDEATARLRRHPRQPD*
Ga0137386_1020676843300012351Vadose Zone SoilAVEAHGGDLMVDDLKSSRPDDSHFVMPRRVPREAVQAYITRIDAARAGLGRHPRRPD*
Ga0137366_1075388733300012354Vadose Zone SoilGGDLMVDDLKSSRPDDRHFVVPKRARGEVVRAYITRIDEATTHLRRHPRQPD*
Ga0137385_1028650343300012359Vadose Zone SoilFEAAVEAHGGDLMVDDLKSSRPDDSHFVMPRRVPREAVQAYITRIDAARAGLGRHPRRPD
Ga0134039_107629813300012374Grasslands SoilAHGGDLMVDDLRSSRPDDPHYVVPRRQHGEVIRAYIGRIDEATASLRRHPRRPD*
Ga0134043_131147023300012392Grasslands SoilMVDDLRSSRPDDPHYVVPRRQHGEVIRAYIGRIDEATASLRRHPRRPD*
Ga0134051_104980113300012398Grasslands SoilFEAAVEGHGGDLMVDDLRSPEPDDAHFVVPRRDHGEAVRAYIGRIDDATAQLRRHPRHTD
Ga0134049_121688113300012403Grasslands SoilRFEGVVEAHGGDLMVDDLKSSQPDDSHFVVPRRGHGETVRAYVVRIDEAAARLRGHPRKPD*
Ga0137397_1010075513300012685Vadose Zone SoilDLKSVQPDDRHFVVPRRQHGEAVRTYINRIDAATAGLRTHPRRID*
Ga0137397_1020709123300012685Vadose Zone SoilEAHGGDLMVDDLKSAQPDDRHFVVPRRVAREAIRAYIGRIDAATADLRHHPRGRD*
Ga0137359_1020390433300012923Vadose Zone SoilDLMVDDLKSSQPDDRHFVVPRRAHGEAVRAYVTRIDEAAAQLRRHPRKPD*
Ga0137419_1154683423300012925Vadose Zone SoilDLMVDDLKSSQPDDRHFVVPRRAHDETVRAYVARIDEAAARLRGHPRKPD*
Ga0137407_1215383513300012930Vadose Zone SoilVEAHGGDLMVDDLKSREPDDRHFVLPRRGKGEAVRAYMGRIDDATARLRQHPRRRD*
Ga0134076_1020688613300012976Grasslands SoilHGGDLMVDDLKSSQPDDSHFVVPRRGHGETVRAYVVRIDEAAARLRGHPRKPD*
Ga0134075_1011789623300014154Grasslands SoilMVDDLKSSRPDDQHFVVPRRAHGEAMRTYIARIDEATARLRRHPRRPV*
Ga0134075_1031841823300014154Grasslands SoilDDLKSSQPDDSHFVVPRRGHGETVRAYVVRIDEAAARLRGHPRKPD*
Ga0134078_1004867113300014157Grasslands SoilHGGDLMVDDLKSSRPDDQHFVVPRRAHGEAMRTYIARIDEAAARLRRHPRRPV*
Ga0137414_119239253300015051Vadose Zone SoilMVDDLKSVQPDDAHFVLPRRDAGEAVRAYIGRIVAATANLRDHPRKPD*
Ga0137405_108229813300015053Vadose Zone SoilVDDLKSSPQPDDQHFVVPRRGPGETVRAYVVRIDEAAGRLRRHPRQPD*
Ga0137420_140222223300015054Vadose Zone SoilMVDDLKSSQPDDSHFVVPRRGHGETVRAYVARIDEAAGRLRAIRGKPD*
Ga0137418_1007227013300015241Vadose Zone SoilRFEAVVEAHGGDLMVDDLKSSQPDDRHFVVPRRAHGETVRAYVIRIDEAAGRLRDHPRKPD*
Ga0137418_1106862523300015241Vadose Zone SoilAHGGDLMVDDLKSSQPDDRHFVVPRRAHDETVRAYVARIDEAAARLRGHPRKPD*
Ga0134089_1017000823300015358Grasslands SoilGDLMVDDLKSSRPDDQHFVVPRRAHGEAMRTYIARIDEATARLRRHPRRPV*
Ga0134089_1047491523300015358Grasslands SoilGDLMVDDLKSSRPDDRHFVVPRRGPGEAIRPYVARIDEAAARLRRHPRKPD*
Ga0134069_134349913300017654Grasslands SoilLMVDDLKSSEPDDRHFVVPRRAAGEAVRRYIGRIDEATAQLRRHPPRPD
Ga0134112_1016874133300017656Grasslands SoilFEAVVEAHGGDLMVDDLKSSQPDDSHFVVPRRGHGETVRAYVVRIDEAAARLRGHPRKPD
Ga0134112_1029596623300017656Grasslands SoilVDDLRSSRPDDPHYVVPRRQHGEVIRAYIGRIDEATASLRRHPRRPD
Ga0134074_136704523300017657Grasslands SoilGDLMVDDLKSSRPDDQHFVVPRRAHGEAMRTYIARIDEATARLRRHPRRPD
Ga0187765_1003994533300018060Tropical PeatlandGGDLMVDDLKSSKPDDRHFVVPRRAQGEKVRAYIARIDEATARLRHHPRKPD
Ga0184637_1016754713300018063Groundwater SedimentHGGDLMVDDLKSSRPDDPHFVVPRRAHGEAVRTYIGLIDEATAGLRRHPPQPD
Ga0184612_1016615043300018078Groundwater SedimentMVDDLKSSQPDDRHFVVPRRASGEAVRAYIGRIVEATASLRRHPPRPD
Ga0066655_1043306013300018431Grasslands SoilAAVEAHGGDLMVDDLKSAQPDDRHFVVPRRGHGEAVRAYIGRIDEATARLRRHPRQPD
Ga0066669_1007291233300018482Grasslands SoilEAHGGDLMVDDLKSSRPDDRHFVMPRRVPREAVRAYIGRIDAARLALGPHPRRADP
Ga0066669_1014204733300018482Grasslands SoilDLMVDDLNSPEPDDQHFVLPRRRPGEAIRPYIARIEAATVALRQHPPHPD
Ga0137417_137947213300024330Vadose Zone SoilAHGGDLMVDDLKSAEPDDRHFVVPRRARGEAVRAYVGRIDEATAQLRRHPRQRD
Ga0207658_1016039613300025986Switchgrass RhizosphereGGDLMVDDLTSPEPDDPHFVLPEREPGESVSAYIDRIVVASDQIRRHPSID
Ga0209234_100156593300026295Grasslands SoilDLMVDDLKSSRPDDRHFVVPRRAQGEALRAYIRRIDEATAKLGRHPRQPDP
Ga0209235_116980313300026296Grasslands SoilAVEAHGGDLMVDDLKSSRPDDRHFVVPRRAHGEAVRTYIGRIDEATAQLRRHPRQPD
Ga0209237_104406743300026297Grasslands SoilVTVEAHGGDLMVDDLKSAQPDDRHFVVPRRGHGEAVRTYIGRIDEATARLRRHPRQPD
Ga0209236_118017413300026298Grasslands SoilDLMVDDLKSSRPDDRHFVVPRRAHGEAVRGYIGRIDEATAQLRRHPRQPD
Ga0209238_100885543300026301Grasslands SoilLMVDDLKSSRPDDRHFVVPRRAQGEALRAYIRRIDEATAKLGRHPRQPDP
Ga0209238_106892343300026301Grasslands SoilMVDDLRSSRPDDPHYVVPRRAHGEVIRAYIGRIDDATASLRRHPPRPD
Ga0209468_111739413300026306SoilMVDDLKSSRPDDRHFVLPRRGKDESARAYLVRIDEAAMALRGHPRHPG
Ga0209469_108682823300026307SoilLMVDDLKSVQPDDSHFVVPRRGARETVRAYIGRIDEAAALLRRHPPQPD
Ga0209239_118622313300026310Grasslands SoilDLMVDDLKSAEPDDRHFVVPRRAHGEAVRKYIGRIDEATAQLRRHPRQRD
Ga0209472_119099413300026323SoilGDLMVDDLKSSQPDDSHFVVPRRGHGEAVRAYVVRIDEAAARLRGHPRKPD
Ga0209266_129309813300026327SoilDDLKSSRPDDRHFVVPRRARGEALRTYIGRIDEATARLRAHPRQPD
Ga0209802_100499183300026328SoilHGGDLMVDDLKSTQPDDAHFVVPRRGHGEGIRAYIGRIDDATAQLRRHPRHTD
Ga0209690_128485923300026524SoilMVDDLRSSRPDDPHYVVPRRAHGEGIRAYIGRIDEATAGLRRHPPRPD
Ga0209378_100808913300026528SoilEAHGGDLMVDDLKSSRPDDSHFVMPRRVPREAVQAYIGRIDAARAALGRHPRRPD
Ga0179587_1029205133300026557Vadose Zone SoilAVVEAHGGDLMVDDLKSSQPDDQHFVVPRRAPGETVRAYVVRIDEAAGRLRGHPRQPD
Ga0209729_105336323300027061Forest SoilGGDLMVDDLKSSRPNDRHFVVPRRAPREAVRAYIGRIDAATTGLRRHPPQRD
Ga0209590_1021959413300027882Vadose Zone SoilVEAHGGDLMVDDLMSSQPDDSHFVVPRRGHGETVQAYVVRIDEAAARLRVHPRKPD
Ga0209590_1080520513300027882Vadose Zone SoilAHGGDLMVDDLKSSQPDDRHFVVPRREHGETVRAYVTRIDEAAARLRGHPRKPD
Ga0307312_1004945213300028828SoilHGGDLMVDDLKSSEPDDPHFVVPRRGHGETVRAYIARIDEATARLRRHPRATD
Ga0307472_10179335513300032205Hardwood Forest SoilEAVVEAHGGDLMVDDLKSSQPDDQHFVVPRRGHGETVRAYVVRIDEAAARLRGHPRKPD
Ga0364931_0316411_355_5013300034176SedimentMVDDLKSPQPDDRHFVLPRRAHAETIRAYVVRIDEATAGLRRHPRRPD

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Bioinformatics & Integrated Biology Lab
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