Metagenome / Metatranscriptome Family F075846

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F075846
Family Type	Metagenome / Metatranscriptome
Number of Sequences	118
Average Sequence Length	124 residues
Representative Sequence	GMEWTDTTEVPIRADAFDATERSLTSYRATESDDPRAKKAIKLESTGSYQRRGKGTQYDQQLEMTASGTRTAVHYMNPDGTLASARGSDAGDLTITIPAVGQTVPVKQAGTFSIILLRPPKR
Number of Associated Samples	102
Number of Associated Scaffolds	118

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	20.34 %
% of genes near scaffold ends (potentially truncated)	80.51 %
% of genes from short scaffolds (< 2000 bps)	89.83 %
Associated GOLD sequencing projects	100
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.75

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (81.356 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (22.881 % of family members)
Environment Ontology (ENVO)	Unclassified (25.424 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (44.915 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 2.00% β-sheet: 60.67% Coil/Unstructured: 37.33%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.75
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.75
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Structural matches with SCOPe domains

SCOP family	SCOP domain	Representative PDB	TM-score
f.4.5.1: Autotransporter	d1uynx_	1uyn	0.72
f.4.4.2: OMPT-like	d1k24a_	1k24	0.68
f.4.1.1: OMPA-like	d1p4ta_	1p4t	0.65
f.4.1.1: OMPA-like	d1qjpa_	1qjp	0.65
f.4.4.0: OMPT-like	d2x55a1	2x55	0.65

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 118 Family Scaffolds
PF12732	YtxH	22.03
PF02768	DNA_pol3_beta_3	19.49
PF08299	Bac_DnaA_C	2.54
PF14849	YidC_periplas	0.85
PF00156	Pribosyltran	0.85

COG ID	Name	Functional Category	% Frequency in 118 Family Scaffolds
COG0592	DNA polymerase III sliding clamp (beta) subunit, PCNA homolog	Replication, recombination and repair [L]	19.49
COG0593	Chromosomal replication initiation ATPase DnaA	Replication, recombination and repair [L]	2.54

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	81.36 %
Unclassified	root	N/A	18.64 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	81.36 %
Unclassified	root	N/A	18.64 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	81.36 %
Unclassified	root	N/A	18.64 %

Name	Rank	Taxonomy	Distribution
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	72.03 %
Unclassified	root	N/A	18.64 %

Name	Rank	Taxonomy	Distribution
Gemmatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	72.03 %
Unclassified	root	N/A	18.64 %

Name	Rank	Taxonomy	Distribution
Gemmatimonadetes	class	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes	72.03 %
Unclassified	root	N/A	18.64 %

Name	Rank	Taxonomy	Distribution
Gemmatimonadales	order	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales	72.03 %
Unclassified	root	N/A	18.64 %

Name	Rank	Taxonomy	Distribution
unclassified Gemmatimonadales	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales	70.34 %
Unclassified	root	N/A	18.64 %
Gemmatimonadaceae	family	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae	1.69 %

Name	Rank	Taxonomy	Distribution
Gemmatimonadales bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	70.34 %
Unclassified	root	N/A	18.64 %
Gemmatimonas	genus	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatimonas	1.69 %

Name	Rank	Taxonomy	Distribution
Gemmatimonadales bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	70.34 %
Unclassified	root	N/A	18.64 %
Gemmatimonas aurantiaca	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatimonas → Gemmatimonas aurantiaca	0.85 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000156\|NODE_c0331087	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	632	Open in IMG/M
3300000787\|JGI11643J11755_11403939	All Organisms → cellular organisms → Bacteria	973	Open in IMG/M
3300001305\|C688J14111_10038726	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	1432	Open in IMG/M
3300002568\|C688J35102_118411571	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	557	Open in IMG/M
3300003267\|soilL1_10001594	All Organisms → cellular organisms → Bacteria	26082	Open in IMG/M
3300003997\|Ga0055466_10199547	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	589	Open in IMG/M
3300004643\|Ga0062591_102227856	Not Available	570	Open in IMG/M
3300004803\|Ga0058862_12687890	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	709	Open in IMG/M
3300005336\|Ga0070680_101058324	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	701	Open in IMG/M
3300005345\|Ga0070692_10478375	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	803	Open in IMG/M
3300005440\|Ga0070705_101158292	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	635	Open in IMG/M
3300005546\|Ga0070696_100671326	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	842	Open in IMG/M
3300005546\|Ga0070696_101820119	Not Available	526	Open in IMG/M
3300005874\|Ga0075288_1005033	Not Available	1687	Open in IMG/M
3300005884\|Ga0075291_1064007	Not Available	510	Open in IMG/M
3300005889\|Ga0075290_1004561	Not Available	1511	Open in IMG/M
3300006804\|Ga0079221_11389327	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	558	Open in IMG/M
3300006853\|Ga0075420_100589660	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	960	Open in IMG/M
3300006853\|Ga0075420_100907065	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	758	Open in IMG/M
3300006876\|Ga0079217_10407904	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	805	Open in IMG/M
3300007004\|Ga0079218_10436814	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	1131	Open in IMG/M
3300009174\|Ga0105241_12353947	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	531	Open in IMG/M
3300009551\|Ga0105238_12562606	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	546	Open in IMG/M
3300009840\|Ga0126313_10056764	All Organisms → cellular organisms → Bacteria	2779	Open in IMG/M
3300009840\|Ga0126313_11296570	Not Available	602	Open in IMG/M
3300010036\|Ga0126305_10025071	All Organisms → cellular organisms → Bacteria	3189	Open in IMG/M
3300010037\|Ga0126304_10091016	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	1916	Open in IMG/M
3300010037\|Ga0126304_10250107	All Organisms → cellular organisms → Bacteria	1166	Open in IMG/M
3300010039\|Ga0126309_10006276	All Organisms → cellular organisms → Bacteria	4656	Open in IMG/M
3300010040\|Ga0126308_10927611	Not Available	608	Open in IMG/M
3300010045\|Ga0126311_11477048	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	569	Open in IMG/M
3300010045\|Ga0126311_11559688	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	555	Open in IMG/M
3300010045\|Ga0126311_11562108	Not Available	554	Open in IMG/M
3300010166\|Ga0126306_10177727	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	1596	Open in IMG/M
3300010166\|Ga0126306_11397348	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	579	Open in IMG/M
3300010371\|Ga0134125_12489240	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	563	Open in IMG/M
3300010373\|Ga0134128_12035223	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	632	Open in IMG/M
3300010373\|Ga0134128_12104118	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	622	Open in IMG/M
3300010396\|Ga0134126_10584206	All Organisms → cellular organisms → Bacteria	1279	Open in IMG/M
3300010399\|Ga0134127_13033504	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	548	Open in IMG/M
3300010399\|Ga0134127_13071978	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	545	Open in IMG/M
3300010403\|Ga0134123_13630948	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	501	Open in IMG/M
3300010999\|Ga0138505_100007071	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	1213	Open in IMG/M
3300012212\|Ga0150985_116645826	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	711	Open in IMG/M
3300012469\|Ga0150984_101228922	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	2022	Open in IMG/M
3300012469\|Ga0150984_113406066	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	2829	Open in IMG/M
3300012469\|Ga0150984_118817606	Not Available	581	Open in IMG/M
3300012527\|Ga0136633_1277909	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	609	Open in IMG/M
3300012678\|Ga0136615_10122389	All Organisms → cellular organisms → Bacteria	1244	Open in IMG/M
3300012678\|Ga0136615_10235808	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	825	Open in IMG/M
3300012681\|Ga0136613_10006258	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatimonas → Gemmatimonas aurantiaca	6636	Open in IMG/M
3300012684\|Ga0136614_10690098	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	720	Open in IMG/M
3300012910\|Ga0157308_10414518	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	526	Open in IMG/M
3300012927\|Ga0137416_10926339	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	776	Open in IMG/M
3300012930\|Ga0137407_10060327	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	3118	Open in IMG/M
3300012989\|Ga0164305_11417706	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	612	Open in IMG/M
3300013100\|Ga0157373_10740285	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	722	Open in IMG/M
3300014268\|Ga0075309_1075025	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	799	Open in IMG/M
3300015077\|Ga0173483_10538190	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	630	Open in IMG/M
3300017656\|Ga0134112_10520967	Not Available	506	Open in IMG/M
3300018000\|Ga0184604_10215791	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	663	Open in IMG/M
3300018054\|Ga0184621_10240542	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	647	Open in IMG/M
3300018063\|Ga0184637_10159026	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	1393	Open in IMG/M
3300018071\|Ga0184618_10196100	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	842	Open in IMG/M
3300018076\|Ga0184609_10479280	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	569	Open in IMG/M
3300018422\|Ga0190265_10383379	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	1500	Open in IMG/M
3300018429\|Ga0190272_10109358	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	1800	Open in IMG/M
3300018466\|Ga0190268_11938617	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	538	Open in IMG/M
3300018920\|Ga0190273_11202783	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	645	Open in IMG/M
3300019869\|Ga0193705_1065805	Not Available	724	Open in IMG/M
3300020015\|Ga0193734_1086810	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	531	Open in IMG/M
3300020022\|Ga0193733_1119299	Not Available	730	Open in IMG/M
3300020202\|Ga0196964_10049769	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	1766	Open in IMG/M
3300021078\|Ga0210381_10327118	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	557	Open in IMG/M
3300021080\|Ga0210382_10130495	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	1067	Open in IMG/M
3300022694\|Ga0222623_10228845	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	719	Open in IMG/M
3300022756\|Ga0222622_10990961	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	617	Open in IMG/M
3300025327\|Ga0209751_11359875	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	505	Open in IMG/M
3300025912\|Ga0207707_10950743	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	708	Open in IMG/M
3300025927\|Ga0207687_11872914	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	513	Open in IMG/M
3300026003\|Ga0208284_1005209	Not Available	1006	Open in IMG/M
3300026014\|Ga0208776_1025182	Not Available	512	Open in IMG/M
3300027775\|Ga0209177_10278699	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	629	Open in IMG/M
3300027876\|Ga0209974_10040684	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	1548	Open in IMG/M
3300028536\|Ga0137415_11147379	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	591	Open in IMG/M
3300028708\|Ga0307295_10161577	Not Available	625	Open in IMG/M
3300028721\|Ga0307315_10046079	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	1204	Open in IMG/M
3300028768\|Ga0307280_10265540	Not Available	620	Open in IMG/M
3300028771\|Ga0307320_10242305	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	710	Open in IMG/M
3300028771\|Ga0307320_10255888	Not Available	691	Open in IMG/M
3300028807\|Ga0307305_10028281	All Organisms → cellular organisms → Bacteria	2552	Open in IMG/M
3300028824\|Ga0307310_10026507	All Organisms → cellular organisms → Bacteria	2309	Open in IMG/M
3300028828\|Ga0307312_10124180	Not Available	1620	Open in IMG/M
3300028875\|Ga0307289_10362277	Not Available	596	Open in IMG/M
3300028878\|Ga0307278_10132860	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	1117	Open in IMG/M
3300028880\|Ga0307300_10128475	Not Available	784	Open in IMG/M
3300028884\|Ga0307308_10373292	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	683	Open in IMG/M
3300028885\|Ga0307304_10346616	Not Available	663	Open in IMG/M
3300030606\|Ga0299906_11105778	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	575	Open in IMG/M
3300030620\|Ga0302046_11385631	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	547	Open in IMG/M
3300031114\|Ga0308187_10031516	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	1342	Open in IMG/M
3300031548\|Ga0307408_100343261	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	1264	Open in IMG/M
3300031731\|Ga0307405_10866908	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	761	Open in IMG/M
3300031824\|Ga0307413_10003333	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatimonas	6750	Open in IMG/M
3300031824\|Ga0307413_11413301	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	612	Open in IMG/M
3300031852\|Ga0307410_10769265	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	817	Open in IMG/M
3300031852\|Ga0307410_12107951	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	504	Open in IMG/M
3300031901\|Ga0307406_10113840	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	1867	Open in IMG/M
3300031903\|Ga0307407_11120760	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	612	Open in IMG/M
3300031911\|Ga0307412_11001893	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	738	Open in IMG/M
3300031938\|Ga0308175_102641686	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	562	Open in IMG/M
3300031995\|Ga0307409_100125573	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	2181	Open in IMG/M
3300031995\|Ga0307409_100520229	All Organisms → cellular organisms → Bacteria	1162	Open in IMG/M
3300032002\|Ga0307416_100758173	Not Available	1064	Open in IMG/M
3300032004\|Ga0307414_10922944	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	801	Open in IMG/M
3300033412\|Ga0310810_11382462	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	541	Open in IMG/M
3300034155\|Ga0370498_032871	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	1124	Open in IMG/M
3300034176\|Ga0364931_0095845	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	935	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	77.97%
Host-Associated	Host-Associated	21.19%
Engineered	Engineered	0.85%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	65.25%
Plants	Host-Associated → Plants	20.34%
Aquatic	Environmental → Aquatic	12.71%
Human	Host-Associated → Human	0.85%
Solid Waste	Engineered → Solid Waste	0.85%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	63.56%
Rhizosphere	Host-Associated → Plants → Rhizosphere	18.64%
Freshwater	Environmental → Aquatic → Freshwater	5.93%
Sediment	Environmental → Aquatic → Sediment	5.93%
Rhizoplane	Host-Associated → Plants → Rhizoplane	1.69%
Marine	Environmental → Aquatic → Marine	0.85%
Floodplain	Environmental → Terrestrial → Floodplain	0.85%
Agricultural Field	Environmental → Terrestrial → Agricultural Field	0.85%
Digestive System	Host-Associated → Human → Digestive System	0.85%
Grass	Engineered → Solid Waste → Grass	0.85%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	49.15%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	16.10%
Loam	Environmental → Terrestrial → Soil → Loam	7.63%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	5.93%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	5.93%
Ice	Environmental → Aquatic → Freshwater → Ice	4.24%
Soil	Host-Associated → Plants → Rhizosphere → Soil	2.54%
Sediment	Environmental → Aquatic → Freshwater → Sediment	1.69%
Wetlands	Environmental → Aquatic → Marine → Wetlands	0.85%
Sand	Environmental → Terrestrial → Soil → Sand	0.85%
Sediment	Environmental → Terrestrial → Floodplain → Sediment	0.85%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified	0.85%
Large Intestine	Host-Associated → Human → Digestive System → Large Intestine	0.85%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.85%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	0.85%
Composting	Engineered → Solid Waste → Grass → Composting	0.85%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	42.37%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	16.10%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	5.93%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	5.93%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	5.08%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	5.08%
Unclassified	Environmental → Aquatic → Freshwater → Ice → Unclassified	4.24%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	2.54%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	1.69%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	1.69%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	0.85%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	0.85%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	0.85%
Unclassified	Environmental → Terrestrial → Soil → Loam → Unclassified	0.85%
Desert	Environmental → Terrestrial → Soil → Sand → Desert	0.85%
Unclassified	Environmental → Terrestrial → Floodplain → Sediment → Unclassified	0.85%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified	0.85%
Fecal	Host-Associated → Human → Digestive System → Large Intestine → Fecal	0.85%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.85%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	0.85%
Bioreactor	Engineered → Solid Waste → Grass → Composting → Bioreactor	0.85%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	22.88%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	11.02%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	10.17%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	5.93%
Polar Desert Sand	Environmental → Aquatic → Freshwater → Ice → Unclassified → Polar Desert Sand	4.24%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	4.24%
Rice Paddy Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Rice Paddy Soil	4.24%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	3.39%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	3.39%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	2.54%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	2.54%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	1.69%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	1.69%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	1.69%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	1.69%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	1.69%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.69%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	0.85%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	0.85%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.85%
Sugarcane Root And Bulk Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Sugarcane Root And Bulk Soil	0.85%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	0.85%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	0.85%
Untreated Peat Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil	0.85%
Natural And Restored Wetlands	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands	0.85%
Soil	Environmental → Terrestrial → Soil → Loam → Unclassified → Soil	0.85%
Soil	Environmental → Terrestrial → Soil → Sand → Desert → Soil	0.85%
Sediment	Environmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment	0.85%
Soil	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified → Soil	0.85%
Host-Associated	Host-Associated → Human → Digestive System → Large Intestine → Fecal → Host-Associated	0.85%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	0.85%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	0.85%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.85%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.85%
Sugar Cane Bagasse Incubating Bioreactor	Engineered → Solid Waste → Grass → Composting → Bioreactor → Sugar Cane Bagasse Incubating Bioreactor	0.85%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000156	Sugar cane bagasse incubating bioreactor microbial communities from Sao Carlos, Brazil, that are aerobic and semianaerobic	Engineered	Open in IMG/M
3300000787	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300001305	Grasslands soil microbial communities from Hopland, California, USA	Environmental	Open in IMG/M
3300002568	Grasslands soil microbial communities from Hopland, California, USA - 2	Environmental	Open in IMG/M
3300003267	Sugarcane bulk soil Sample L1	Environmental	Open in IMG/M
3300003997	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_CattailC_D1	Environmental	Open in IMG/M
3300004643	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3	Environmental	Open in IMG/M
3300004803	Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - soil CB-2 (Metagenome Metatranscriptome)	Host-Associated	Open in IMG/M
3300005336	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG	Environmental	Open in IMG/M
3300005345	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG	Environmental	Open in IMG/M
3300005440	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG	Environmental	Open in IMG/M
3300005546	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG	Environmental	Open in IMG/M
3300005874	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_20C_0N_404	Environmental	Open in IMG/M
3300005884	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_20C_80N_302	Environmental	Open in IMG/M
3300005889	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_20C_80N_201	Environmental	Open in IMG/M
3300006804	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200	Environmental	Open in IMG/M
3300006853	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD4	Host-Associated	Open in IMG/M
3300006876	Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS200	Environmental	Open in IMG/M
3300007004	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Compost	Environmental	Open in IMG/M
3300009174	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG	Host-Associated	Open in IMG/M
3300009551	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG	Host-Associated	Open in IMG/M
3300009840	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105A	Environmental	Open in IMG/M
3300010036	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot26	Environmental	Open in IMG/M
3300010037	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot25	Environmental	Open in IMG/M
3300010039	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot56	Environmental	Open in IMG/M
3300010040	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot55	Environmental	Open in IMG/M
3300010045	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot61	Environmental	Open in IMG/M
3300010166	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot27	Environmental	Open in IMG/M
3300010371	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300010396	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2	Environmental	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300010403	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3	Environmental	Open in IMG/M
3300010999	Agricultural soil microbial communities from Tamara ranch near Red Deer, Alberta, Canada - d1t3i015	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012527	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ83 (22.06)	Environmental	Open in IMG/M
3300012678	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ288 (22.06)	Environmental	Open in IMG/M
3300012681	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ272 (21.06)	Environmental	Open in IMG/M
3300012684	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ279 (21.06)	Environmental	Open in IMG/M
3300012910	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S198-509B-2	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300013100	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG	Host-Associated	Open in IMG/M
3300014268	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNE_CattailA_D1	Environmental	Open in IMG/M
3300015077	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S178-409R-2 (version 2)	Environmental	Open in IMG/M
3300017656	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_11112015	Environmental	Open in IMG/M
3300018000	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_5_coex	Environmental	Open in IMG/M
3300018054	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_b1	Environmental	Open in IMG/M
3300018063	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_127_b2	Environmental	Open in IMG/M
3300018071	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_b1	Environmental	Open in IMG/M
3300018076	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_60_coex	Environmental	Open in IMG/M
3300018422	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 124 T	Environmental	Open in IMG/M
3300018429	Populus adjacent soil microbial communities from riparian zone of Shoshone River, Wyoming, USA - 504 T	Environmental	Open in IMG/M
3300018466	Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 T	Environmental	Open in IMG/M
3300018920	Populus adjacent soil microbial communities from riparian zone of Shoshone River, Wyoming, USA - 504 IS	Environmental	Open in IMG/M
3300019869	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U3m2	Environmental	Open in IMG/M
3300020015	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1m1	Environmental	Open in IMG/M
3300020022	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1s2	Environmental	Open in IMG/M
3300020202	Soil microbial communities from Anza Borrego desert, Southern California, United States - S1_10	Environmental	Open in IMG/M
3300021078	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_5_coex redo	Environmental	Open in IMG/M
3300021080	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_coex redo	Environmental	Open in IMG/M
3300022694	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_30_coex	Environmental	Open in IMG/M
3300022756	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1	Environmental	Open in IMG/M
3300025327	Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 13_1 (SPAdes)	Environmental	Open in IMG/M
3300025912	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025927	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026003	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_20C_80N_201 (SPAdes)	Environmental	Open in IMG/M
3300026014	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_20C_0N_205 (SPAdes)	Environmental	Open in IMG/M
3300027775	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control (SPAdes)	Environmental	Open in IMG/M
3300027876	Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S PM (SPAdes)	Host-Associated	Open in IMG/M
3300028536	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300028708	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_152	Environmental	Open in IMG/M
3300028721	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_355	Environmental	Open in IMG/M
3300028768	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_119	Environmental	Open in IMG/M
3300028771	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_369	Environmental	Open in IMG/M
3300028807	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_186	Environmental	Open in IMG/M
3300028824	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_197	Environmental	Open in IMG/M
3300028828	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_202	Environmental	Open in IMG/M
3300028875	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_143	Environmental	Open in IMG/M
3300028878	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_117	Environmental	Open in IMG/M
3300028880	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_181	Environmental	Open in IMG/M
3300028884	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_195	Environmental	Open in IMG/M
3300028885	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_185	Environmental	Open in IMG/M
3300030606	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT145D125	Environmental	Open in IMG/M
3300030620	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT147D111	Environmental	Open in IMG/M
3300031114	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_182 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031548	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3	Host-Associated	Open in IMG/M
3300031731	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1	Host-Associated	Open in IMG/M
3300031824	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2	Host-Associated	Open in IMG/M
3300031852	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3	Host-Associated	Open in IMG/M
3300031901	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2	Host-Associated	Open in IMG/M
3300031903	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1	Host-Associated	Open in IMG/M
3300031911	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1	Host-Associated	Open in IMG/M
3300031938	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R1	Environmental	Open in IMG/M
3300031995	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2	Host-Associated	Open in IMG/M
3300032002	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3	Host-Associated	Open in IMG/M
3300032004	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3	Host-Associated	Open in IMG/M
3300033412	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NC	Environmental	Open in IMG/M
3300034155	Peat soil microbial communities from wetlands in Alaska, United States - Frozen_pond_05D_17	Environmental	Open in IMG/M
3300034176	Sediment microbial communities from East River floodplain, Colorado, United States - 21_j17	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
NODE_03310871	3300000156	Sugar Cane Bagasse Incubating Bioreactor	PAGARPGMDWTDSTEVPIRADAFDAVESSLTSYHASESDDQRAKKALKLESRGTYQRTGKGSQYDQQMEMKASGSRTGVYYLNPDGTLVAAHGSDSGDMTITVPAVGQTVPVKQAGTYSISAL
JGI11643J11755_114039393	3300000787	Soil	ADAFDAVERSLTRYRAADSDDPKAKKALKLESTGTYQRTGKGAQYDQQMEMTASGNRTGVYYVNSDGTLTSARGSDSGDMTITVPAVGQTVPVKQAGSYVISSTRPTKR*
C688J14111_100387261	3300001305	Soil	MEWTDTTEVPIRADAFDAVERSFTTFRASDSDDPKAKKALKLESNGTYQRKGKGTQYDQQLEMTASGSRTAVYYVNPDGSIAAARGSDSGDMTITVPAVGQTVPVKQAGSYTITATRPPKR*
C688J35102_1184115712	3300002568	Soil	LRALFPSLPSGGAQSGMEWADTTEVPIRADAFDAVERSLTRYRAADSDDARARKALKLESTGTYQRTGKGTQYNQQLEMTASGTRSAVYYLNLDGTLAAARGSDTGDMTITVPAVGQTVPVKQAGSYTITSVRSSKR*
soilL1_1000159424	3300003267	Sugarcane Root And Bulk Soil	MEWTDTNEVAIRADAFDATERSVTQYRSAESDDPRNRKAIKLEGSGTYQRSGKGTQYDQRMEMTASGNRSAVYYLNPDGTLAMARGTDAADMTIIVPAVGQTVPVKQAGSYTITALRPAKK*
Ga0055466_101995471	3300003997	Natural And Restored Wetlands	SSTLGDQIGSNLRSLFPALPEGGARSGMEWTDTTEVPIRADAFDAVERSLTRYRAAESDDPNVGKALKLESSGTYERSGKGTQYDQQLEMTASGKRSAVYYLSPDGTLASARGNDSGDMTITVPAVGQTVPVKQAGSYTITLFRQPKR*
Ga0062591_1022278562	3300004643	Soil	RSLFPALPVGGVKSGEQWTDTTEVPIRADAFDATERALTNYRATDSDDPRAKKAIKLESTGSYERAGKGTQYDQQMEMTASGTRTAVHYLNSDGTLASAHGTDAGDLTITIPAVGQSVPVKQSGAYSITSLRPARH*
Ga0058862_126878901	3300004803	Host-Associated	EVPIRADAFDAVESSLTKYRAMESDDARAKNAVKLESSGSFRRSGKGTQYNQQLEMTASGTRSAVYYLNPDGTLASARGSDAGDMTITVPAVGQTVPVKQAGSYTITSLHPAKR*
Ga0070680_1010583242	3300005336	Corn Rhizosphere	DAFDAVESSLTKYRAMESDDARAKNAVKLESSGSFRRSGKGTQYNQQLEMTASGTRSAVYYLNPDGTLASARGSDAGDMTITVPAVGQTVPVKQAGSYTITSLRPAKR*
Ga0070692_104783752	3300005345	Corn, Switchgrass And Miscanthus Rhizosphere	YRAMESDDARAKNAVKLESSGSFRRSGKGTQYNQQLEMTASGTRSAVYYLNPDGTLASARGSDAGDMTITVPAVGQTVPVKQAGSYTITSLRPAKR*
Ga0070705_1011582921	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	MQWTDSTEVPIRADAFDATERSFTNYRSTESDDPNAKKAIKLEGSGTYQRTGRGTQYDQKLEMTASGVRTSVHYLNPDGTLASAHGSDSGDMTITVPAVGQTVPVKQSGSYSITSTSLRSGKR*
Ga0070696_1006713262	3300005546	Corn, Switchgrass And Miscanthus Rhizosphere	IRADAFDATERSFTNYRSTESDDPNAKKAIKLEGSGTYQRTGRGTQYDQKLEMTASGVRTSVHYLNPDGTLASAHGSDSGDMTITVPAVGQTVPVKQSGSYSITSLRPGKR*
Ga0070696_1018201191	3300005546	Corn, Switchgrass And Miscanthus Rhizosphere	RADAFDATERSLTSYRATESDDPRAKKAIKLESTGSYQRRGKGTQYDQQLEMTASGTRTAVHYMNPDGTLASARGSDAGDLTITIPAVGQTVPVKQAGTFSIILLRPPKR*
Ga0075288_10050331	3300005874	Rice Paddy Soil	DVPIRADAFDATERSITNYHATDSDDPRAKKALKLESTGQYQRTGKGSQYDQQMEMTASGSRRAVHYLNSDGTLAVAHGNDAGDLTITIPSVGQTVPVKQAGTFSITSLRVGSR*
Ga0075291_10640071	3300005884	Rice Paddy Soil	LRTLFPSLPPGGVTAGMSWTDTTDVPIRADAFDATERSITSYHATDSDDPRAKKALKLESTGQYQRTGKGSQYDQQMEMTASGSRRAVHYLNSDGTLAVAHGNDAGDLTITIPSVGQTVPVKQAGTFSITSLRVGSR*
Ga0075290_10045612	3300005889	Rice Paddy Soil	LTPDGRLSALKADRSTTVGDQVGSTLRTLFPSLPPGGVTPGMSWTDTTDVPIRADAFDATERSITNYHATDSDDPRAKKALKLESTGQYQRTGKGSQYDQQMEMTASGSRRAVHYLNSDGTLAVAHGNDAGDLTITIPSVGQTVPVKQAGTFSITSLRVGSR*
Ga0079221_113893272	3300006804	Agricultural Soil	DRSTTVGDQIGSQLRLLFPALPPAGARPGMDWTDSTEVPIRADAFDAVESSLTSYHASESDDQRAKKALKLESRGTYQRTGKGSQYDQQMEMKASGSRTAVYYLNPDGTLVSAHGNDTGDMTITVPAVGQTVPVKQAGTYSISALRPAKR*
Ga0075420_1005896601	3300006853	Populus Rhizosphere	LTPAGELSALKADRSSTLGDQIGSNLRALFPTLPPGGVKSGMDWTDTTEVPIRADAFDAVERSLTRYRASDSDDPRVKKAVKLESSGTYQRSGKGTQYDQQLEMTASGSRSTVYLMSQDGILVSARGSDAGDMTITVPAVGQTVPVKQTGTYTITAFRPGKR*
Ga0075420_1009070652	3300006853	Populus Rhizosphere	ALPPGGVKAGMEWADTSEVPIRADAFDAIERGITRYRAAESDDPRAKKAVKVESNGSYDRKGKGLQFEQQLEMAGTGSRSAAHYLGPDGILVSARGSDTGDMTITVPAVGQTVPVKQSGSYTITVTRPAKR*
Ga0079217_104079041	3300006876	Agricultural Soil	MEWTDTTDVPIRADAFDALERGVTRYRSSDSDEPRAKDAIKLESIGSYERKGKGTQFDQQLEMSGTGSRTAVHYFGEDGVLISARGRDEGNMTITVPAVGQTVPVKHAGSYTITSRAQPKR*
Ga0079218_104368141	3300007004	Agricultural Soil	SLKADRSSTLGDQVGSNLRSLFPSLPSGGVRAGMEWTDTTEVPIRADAFDAVERSFTSYRSTESDDSRAKKALKLESSGSYQRTGKGTQYAQKMEMTASGSRTAVHYLNPDGTLASARGTDSGDMTITIPAVGQTVPVKQAGSYTIVALRQARR*
Ga0105241_123539471	3300009174	Corn Rhizosphere	AFDAVESSLTKYRAMESDDARAKNAVKLESSGSFRRSGKGTQYNQQLEMTASGTRSAVYYLNPDGTLASARGSDAGDMTITVPAVGQTVPVKQAGSYTITSLRPAKR*
Ga0105238_125626061	3300009551	Corn Rhizosphere	RAMESDDARAKNAVKLESSGSFRRSGKGTQYNQQLEMTASGTRSAVYYLNPDGTLASARGSDAGDMTITVPAVGQTVPVKQAGSYTITSLRPAKR*
Ga0126313_100567644	3300009840	Serpentine Soil	ADAFDATERGITSYRSAESDNSRAKKAVKIESNGTFDRKGKGMQFDQPLEMSGSGTRNAVHYFGQDGVLISAQGSDTGDMTITVPAVGQTVPVKQTGSYTISAIRPPKG*
Ga0126313_112965701	3300009840	Serpentine Soil	MEWTDTSEVPIRADAFDAVERSLTTYRAEGSDDASARKALKLESNGSYQRTGKGTQYDQQMEMSALGNRSAVHYLNPDGTLASARGSDSGDMT
Ga0126305_100250714	3300010036	Serpentine Soil	SNLRTLFPALPTGGVRTGMEWTDTTEVPIRADAFDAVERSLTKYRATDSDDARAKNAVKLESSGTFRRSGKGTQYNQQMEMTASGTRSAVYYLNPDGTLASARGSDAGDMTITVPAVGQTVPVKQAGSYTITSLHPVKR*
Ga0126304_100910161	3300010037	Serpentine Soil	MSVNGRLSGLTADRSTTLGDQLGPSLRSLFPSLPTGGVRTGMEWADTSEVPLRADAFDATERGITRYRAVESDDARAKKAIKVESSGSYDRKGKGVQFDQPLEMAGTGSRSAAHYLGPDGILVSARGSETGDLTITVPAVGQTVPVKQ
Ga0126304_102501071	3300010037	Serpentine Soil	AFDATERGITRYRAVESDDDRAKKAIKVESSGSYDRKGKGVQFEQPLEMSGTGSRSAAHYLGPDGILVSARGSDTGDMTITVPAVGQTVPVKQSGSYTITPTRTAKR*
Ga0126309_100062764	3300010039	Serpentine Soil	MEWTDTTEVPIRADAFDASERGITRYKSLESDEPRAKNAIKLESTGSYERKGKGVQFDQQLEMSGTGSRTAVHYFGQDGILISGRGRDAGEMTITVPAVGQTVPVRHSGSYTITSKGPGKR*
Ga0126308_109276112	3300010040	Serpentine Soil	MQWTDTTTATPIRADAFDATERSLTSYHATESDDAKAKNAIKLESSGSYQRQGKGTQYDQQMEMTASGTRTAIYYMNPDGTLVSARGSDAGDLTITIPAVGQTVPVKQAGTFSIIALRPTKR*
Ga0126311_114770481	3300010045	Serpentine Soil	RWTATLSPDGGLSALKADRTTTLGDQIGSNLRSLFPALPPGGVRSGLEWTDTTEVPIRADAFNAVERSLTRYRAADSDDARAKKALKLESNGTYQRTGKGTQYDQQLEMTASGSRSAVHYLNPDGTLAMARGSDAGDMTITVPAVGQTVPVKQTGTYTITSLLSAKR*
Ga0126311_115596881	3300010045	Serpentine Soil	MEWTDTTEVPIRADAFDAVERSLTRYRAADSDDAKARKALKLESNGTYQRTGKGTQYNQQLEMTASGNRSAVYYLNLDGTLAAARGSDMGDMTITVPAVGQTVPVKQAGSYTITSVRSSKR*
Ga0126311_115621081	3300010045	Serpentine Soil	MEWTDTTEVPLRADAFDATEKSLTTYRAFESDDSRAKKALKLESAGSYQRTGKGTQYDQQLEMTASGNRRVIHYLNPDGTLASARGTDSGDLTITIPAIGQT
Ga0126306_101777272	3300010166	Serpentine Soil	MSVNGRLSGLTADRSTTLGDQLGPSLRSLFPSLPTGGVRTGMEWADTSEVPLRADAFDATERGITRYRAVESDDARAKKAIKVESSGSYDRKGKGVQFDQPLEMAGTGSRSAAHYLGPDGILVSARGSETGD
Ga0126306_113973481	3300010166	Serpentine Soil	MEWTDTTDVPIRADAFDASERGVTRYRSLESDEPRAKNAIKLESTGSYERKGKGMQFDQQLEMSGTGSRTAVHYFGQDGILVSGRGRDAGEMTITVPAVGQTVPVKHAGSYTITSRAQPKR*
Ga0134125_124892402	3300010371	Terrestrial Soil	MEWTDTTDVPIRADAFDATEHGVTSYRATDSDDPRAKKAIKLESTGSYQRTGKGMQFQQQLEMAGTGTRTAVHYLGQDGVLISARGSDAGEMTISVPAVGQTVPVKHTGSYTITAVRPPKR*
Ga0134128_120352231	3300010373	Terrestrial Soil	MEWSDRTEVPSRADAFDAVEHSLTKYRAMDSDDARAKNAVKLESSGSFRRSGKGTQYNQQLEMTASGTRSAVYYLNPDGTLASARGSDAGDMTITVPAVGQTVPVKQAGSYTITSLRPAKR*
Ga0134128_121041181	3300010373	Terrestrial Soil	MDWTDSTEVPVRADAFDAVESSLTSYHASESDDQRAKKALKLESRGTYQRTGKGSQYDQQMEMKSSGSRTAVYYLNPDGTLVSAHGNDTGDMTITVPAVGQTVPVKQAGTYSISAIRPAKR*
Ga0134126_105842063	3300010396	Terrestrial Soil	FDAVESSLTSYHASESDDQRAKKALKLESRGTYQRTGKGSQYDQQMEMKASGSRTAVYYLNPDGTLVSAHGNDTGDMTITVPAVGQTVPVKQAGTYSISALRPAKR*
Ga0134127_130335041	3300010399	Terrestrial Soil	ADAFDAVEHSLTKYRAMDSDDARAKNAVKLESSGSFRRSGKGTQYNQQLEMTASGTRSAVYYLNPDGTLASARGSDAGDMTITVPAVGQTVPVKQAGSYTITSLRPAKR*
Ga0134127_130719782	3300010399	Terrestrial Soil	GATLRSLFPSLPTGGVRAGMEWTDTTDVPIRADAFDATEHGVTSYRAMDSDDPRAKKAIKLESSGSYQRTGKGMQFQQQLEMAGTGTRTAVHYLGQDGVLISARGSDAGEMTISVPAVGQTVPVKHTGSYTITAVRPPKR*
Ga0134123_136309481	3300010403	Terrestrial Soil	GGVRTGMQWTDSTEVPIRADAFDATERSFTNYRSTESDDPNAKKAIKLESSGTYQRTGRGTQYDQKLEMTASGVRTSVHYLNPDGTLASAHGSDSGDMTITVPAVGQTVPVKQSGSYSITSLRSGKR*
Ga0138505_1000070711	3300010999	Soil	TPNGELSALRADRTTTLGDQIGSSLRVLFPALPPGGARAGMEWTDTTEVPIRADAFDAIERSLTSFRATDSDDPKVKKALKLDSKGTYQRTGKGTQYDQQMEMTAAGSRTGVYYVNPDGTLASARGSDSGDMTITVPAVGQTVPVKQAGSYIISTTRQTKR*
Ga0150985_1166458262	3300012212	Avena Fatua Rhizosphere	MEWTDTTEVPIRADAFDAVERSLTTFRASDSDDPKAKKALKLESNGTYQRKGKGTQYDQQLEMTATGSRTAVYYVNPDGTIASARGSDSGDMTITVPAVGQTVPVKQAGSYTITATRPPKR*
Ga0150984_1012289221	3300012469	Avena Fatua Rhizosphere	ERSLTKYRAMDSDDARAKSAVKLESSGTFRRSGKGTQYNQQLEMTASGTRSAVYYLNPDGTLASARGSDAGDMTITVPAVGQTVPVKQAGSYTITSLRPAKR*
Ga0150984_1134060661	3300012469	Avena Fatua Rhizosphere	MEWADTTEVPIRADAFDAVERSLTRYRAADSDDARARKALKLESTGTYQRTGKGTQYNQQLEMTASGTRSAVYYLNLDGTLAAARGSDTGDMTITVPAVGQTVPVKQAGSYTITSVRSSKR*
Ga0150984_1188176062	3300012469	Avena Fatua Rhizosphere	VKSGTEWTDTTEVPIRADAFAATERSIISYRASDSDDPRAKKAIKLESRGSYQRRGKGTQYDQQMEMTASGTRTAVHYMNADGTLASARGSDAGDLTITIPAVG*
Ga0136633_12779091	3300012527	Polar Desert Sand	MEWTDTTNVPIRADAFDATEHGVTTYRAVDSDDPRAKKAIKLESNGSYERTGKGVQFEQQLEMSGTGTRAAVHYLTQDGVLLSARGSDAGNMTISVPAVGQTVPVKQAGSYTVTAIRIPKR*
Ga0136615_101223891	3300012678	Polar Desert Sand	RADAFDAAERGITRYRAVESDNPRTRNAIKLESSGSYDRTGKGVQFDQQLEMSGSGTRTAVHYFGQDGILISARGSDAGDMTITVPAVGQTVPVKQAGSYTITSIRPPNR*
Ga0136615_102358081	3300012678	Polar Desert Sand	VGMEWADTTDVPIRADAFNAAERGITSYRAVESDDPRARKALKLESNGSYERTGKGMQFEQQLEMSGTGTRTAVHYLGSDGFVISGRGSDSGDMTITVPAVGQTVPVKQTGSYTVTRSAQPKR*
Ga0136613_100062581	3300012681	Polar Desert Sand	MEWADTTDVPVRADAFDAAERGITRYRAVESDNPRTRNAIKLESSGSYDRTGKGVQFDQQLEMSGSGTRTAVHYFGQDGILISARGSDAGDMTITVPAVGQTVPVKQAGSYTITSIRPPNR*
Ga0136614_106900982	3300012684	Polar Desert Sand	MEWADTANVPIRADAFDAVERATTSYRSAESDDPRAKKAIKVESRGSYQRTGKGTQFDQQLEMSGTGMRTALHYLSQEGILLSARGSDAGDMTITVPAVGQTVPVKQTGSYIITSTRQSKR*
Ga0157308_104145181	3300012910	Soil	FDAVESSVTKYRAMESDDARAKNAVKLESSGSFRRSGKGTQYNQQLEMTASGTRSAVYYLNPDGTLASARGSDAGDMTITVPAVGQTVPVKQAGSYTITSLRPAKR*
Ga0137416_109263391	3300012927	Vadose Zone Soil	MQWTDSTEVPIRADAFDATERSLTNYRSTESDDPSAKKAVKLESSGTYQRTGRGTQYDQKLEMTASGMRTSVHYLNPDGTLASAHGSDSGDMTITVPAVGQTVPVKQSGSYSITALRSGKR*
Ga0137407_100603274	3300012930	Vadose Zone Soil	GMEWTDTTEVPIRADAFDATERSLTSYRATESDDPRAKKAIKLESTGSYQRRGKGTQYDQQLEMTASGTRTAVHYMNPDGTLASARGSDAGDLTITIPAVGQTVPVKQAGTFSIILLRPPKR*
Ga0164305_114177062	3300012989	Soil	FDAMERSLATFHSTESDDPHAKKALKLESRVTFQRTGKGTQYDQQMEMTATGNRTAVYYLNPDGTLASAHGNDSGDMTITVPAVGQSVPVKQTGNYTITATRPPAKH*
Ga0157373_107402852	3300013100	Corn Rhizosphere	MDWTDSTEVPVRTDAFDAVESSLTSYHASESDDQRAKKALKLESRGTYQRTGKGSQYDQQMEMKSSGSRTAVYYLNPDGTLVSAHGNDTGDMTITVPAVGQTVPVKQAGTYSISAIRPAKR*
Ga0075309_10750251	3300014268	Natural And Restored Wetlands	MSVNGELSALTADRSTTLGDQMGTALRSLFPALPPGGVRAGMEWVDTNQVPIRADAFDAVERGITRYRASDSDDPNAKKALKVESNGSYDRKGKGVQFEQQLEMSASGSRSAAHYLGPDGILVFARGSDTGDMTITVPAVGQTVPVKQSGSYTITATQPAAKR*
Ga0173483_105381901	3300015077	Soil	WSDTSEVPIRADAFDAVERSLTKYRAMDSDDARAKNAVKLESSGSFRRSGKGTQYNQQLEMTASGTRSAVYYLNPDGTLASARGSDAGDMTITVPAVGQTVPVKQAGSYTITSLRPAKR*
Ga0134112_105209671	3300017656	Grasslands Soil	TDTTEVPIRADAFDATERSLTSYRATESDDPRAKKAIKLESTGSYQRRGKGTQYDQQLEMTASGTRTAVHYMNPDGTLASARGSDAGDLTITIPAVGQTVPVKQAGTFSIILLRPPKR
Ga0184604_102157912	3300018000	Groundwater Sediment	VPIRADAFDATERSFTSYRATESDDPRAKKAIKLESTGSYQRRGKGTQYDQQLEMTASGTRTAVHYLNPDGTLASARGSDAGDLTITIPAVGQSVPVKQAGTFSIILLRPPKR
Ga0184621_102405421	3300018054	Groundwater Sediment	LRSLFPSLPPGGVRTGMEWTDTTDVPIRADAFDATEHGVTSYRAVDSDDPRAKKAIKLESNGSYERTGKGVQFEQKLEMSGTGTRTAVHYLGQDGALISARGSDMGDMTISVPAVGQTVPVKQAGSYTITAVRPPKK
Ga0184637_101590263	3300018063	Groundwater Sediment	SLPPGGVQTGMEWTDTTDVPIRADAFDATEHGVTSYRAIDSDDPRAKKAIKLESNGSYERTGKGVQFEQQLEMSGRGRRTAVHYLSQDGALISARGSDAGDMTISVPAVGQTVPVKQAGSYTITAVRPPKR
Ga0184618_101961001	3300018071	Groundwater Sediment	QLGSNLRSLFPSLPPGGVKAGMEWTDTTEVPIRADAFDATERSFTTYRATESDDPRAKKAIKLESTGSYQRRGKGTQYDQQLEMTASGTRTAVHYMNSDGTLASARGSDAGDLTITIPAVGQSVPVKQAGTFSIILLRPPKR
Ga0184609_104792802	3300018076	Groundwater Sediment	TLRSLFPSLPPGGVRTGMEWTDTSDVPIRADAFDATEHGVTSYRAVESDDPRAKKAIKLESNGSYQRTGKGVQFEQQLEMSGTGTRTAVHYLSQDGALLSARGSDAGDMTISVPAVGQTVPVKQAGSYTITAVRLPKR
Ga0190265_103833791	3300018422	Soil	TSYRATDSDDPRAKKAIKLESNGSYQRAGKGVQFQQQLEMSGTGTRTAVHYLGQDGALILARGSDASDITISVPAVGQTVPVKQTGSYTVTAVRPPKR
Ga0190272_101093583	3300018429	Soil	PIRADAFDATEHGVTSYRAVDSDDPRAKKAIKLESNGSYERTGKGVQFQQQLEMSGTGTRTAVHYLTQDGALLSARGSDAGDMTISVPAVGQTVPVKQAGSYTVTAIRIPKR
Ga0190268_119386171	3300018466	Soil	ALTADRSTTLGDQVGSTLRSLFPGLPSGGVRAGMEWTDTTDVPIRADAFDASERGVTRYRSMDSDEPRARNAIKLESSGSYERKGKGVQFDQQLEMSGTGSRTAVHYFGQDGILISGRGRDAGDMTITVPAVGQTVPVKHAGSYTITSRAQPKR
Ga0190273_112027831	3300018920	Soil	ACDAMERSLTSYRSTESDDSRVKKAIKLESTGSYQRRGKGTQYDQQLEMTASGTRTAVHYLNPDGTLALARGSDAGDLTITIPAVGQSVPVKQAGTFSITSLRPSKR
Ga0193705_10658052	3300019869	Soil	LRSLFPSLPPGGVKAGMDWTDTTEVPIRADAFDATERSFTSYRATESDDPRAKKAIKLESTGSYQRRGKGTQYDQQLEMTASGTRTAVHYLNPDGTLASARGSDAGDLTITIPAVGQSVPVKQAGTFSIILLRPPKR
Ga0193734_10868101	3300020015	Soil	TRWTASLTREGRLSALKADRSTTLGDQLGSNLRSLFPSLPPGGVKAGMDWTDTTEVPIRADAFDATERSFTSYRATESDDPRAKKAIKLESTGSYQRRGKGTQYDQQLEMTASGTRTAVHYLNPDGTLASARGSDAGDLTITIPAVGQTVPVKQAGTFSIILLRPPKR
Ga0193733_11192991	3300020022	Soil	RSTTLGDQLGSNLRSLFPSLPPGGVKAGMDWTDTTEVPIRADAFDATERSFTSYRATESDDPRAKKAIKLESTGSYQRRGKGTQYDQQLEMTASGTRTAVHYLNPDGTLASARGSDAGDLTITIPAVGQSVPVKQAGTFSIILLRPPKR
Ga0196964_100497693	3300020202	Soil	SLFPVLPPGGARSGMDWTDTTEVPIRADAFDAVERSHTRYRALESDQPTARSALKLESSGTYQRSGKGTQYDQQLEMTASGSRSAVHYLNPDGTLISARGNDAGNMTITVPAVGQTVPVKQAGSYTITLSRPPGR
Ga0210381_103271181	3300021078	Groundwater Sediment	RAVDSDDPRAKKAIKLESKGSYERTGKGVQFEQRLEMSGTGTRTAVHYLGQDGALISARGSDAGDMTISVPAVGQTVPVKQAGSYTITAVRPPKK
Ga0210382_101304951	3300021080	Groundwater Sediment	DTTEVPIRADAFDATERSFTTYRATESDDPRAKKAIKLESTGSYQRRGKGTQYDQQLEMTASGTRTAVHYMNSDGTLASARGSDAGDLTITIPAVGQSVPVKQAGTFSIILLRPPKR
Ga0222623_102288451	3300022694	Groundwater Sediment	DTTDVPIRADAFDATEHGVTSYRAVDSDDPRAKKAIKLESNGSYERTGKGVQFEQKLEMSGTGTRTAVHYLGQDGALISARGSDMGDMTISVPAVGQTVPVKQAGNYTITAVRLPKR
Ga0222622_109909611	3300022756	Groundwater Sediment	GVRTGMEWTDTTDVPIRADAFDAIEHGVTSYRAVDSDDPRAKKAIKLESKGSYERTGKGVQFEQRLEMSGTGTRTAVHYLGQDGALISARGSDAGDMTISVPAVGQTVPVKQAGSYTITAVRPPKK
Ga0209751_113598751	3300025327	Soil	RLTPEGELSALTADRSSTLGDQVGSNLRALFPGLPPGGVRVGMEWTDTTEVPLKADAFEATERALTTYRALESDDSRNKKAVKLESNGSYERTGKGTQFDQKLEMSAAGTRSAVHYLSPDGFLISAQGTDAGDMTITVPAVGQTVPVKQTGTYSITSARMGKR
Ga0207707_109507431	3300025912	Corn Rhizosphere	TKYRAMESDDARAKNAVKLESSGSFRRSGKGTQYNQQLEMTASGTRSAVYYLNPDGTLASARGSDAGDMTITVPAVGQTVPVKQAGSYTITSLHPAKR
Ga0207687_118729142	3300025927	Miscanthus Rhizosphere	FDAVERSLTKYRAMESDDARAKNAVKLESSGSFRRSGKGTQYNQQLEMTASGTRSAVYYLNPDGTLASARGSDAGDMTITVPAVGQTVPVKQAGSYTITSLRPAKR
Ga0208284_10052091	3300026003	Rice Paddy Soil	ARLTPDGRLSALKADRSTTVGDQVGSTLRTLFPSLPPGGVTAGMSWTDTTDVPIRADAFDATERSITNYHATDSDDPRAKKALKLESTGQYQRTGKGSQYDQQMEMTASGSRRAVHYLNSDGTLAVAHGNDAGDLTITIPSVGQTVPVKQAGTFSITSLRVGSR
Ga0208776_10251821	3300026014	Rice Paddy Soil	PGGVTAGMSWTDTTDVPIRADAFDATERSITSYHATDSDDPRAKKALKLESTGQYQRTGKGSQYDQQMEMTASGSRRAVHYLNSDGTLAVAHGNDAGDLTITIPSVGQTVPVKQAGTFSITSLRVGSR
Ga0209177_102786991	3300027775	Agricultural Soil	VESALTSYHASESDDQRAKKALKLESRGTYQRTGKGSQYDQQMEMKASGSRTAVYYLNPDGTLVSAHGNDTGDMTITVPAVGQTVPVKQAGTYSISALRPAKR
Ga0209974_100406841	3300027876	Arabidopsis Thaliana Rhizosphere	ADAFDAVERSLTKYRAMESDDARAKNAVKLESSGSFRRSGKGTQYNQQLEMTASGTRSAVYYLNPDGTLASARGSDAGDMTITVPAVGQTVPVKQAGSYTITSLRPAKR
Ga0137415_111473791	3300028536	Vadose Zone Soil	DGKLSALRADRSSTLGDQVGSNLRSLFPALPAGGVRAGMQWTDSTEVPIRADAFDATERSLTNYRSTESDDPSAKKAVKLESSGTYQRTGRGTQYDQKLEMTASGMRTSVHYLNPDGTLASAHGSDSGDMTITVPAVGQTVPVKQSGSYSITALRSGKR
Ga0307295_101615771	3300028708	Soil	VKAGMDWTDTTEVPIRADAFDATERSFTSYRATESDDPRAKKAIKLESTGSYQRRGKGTQYDQQLEMTASGTRTAVHYLNPDGTLASARGSDAGDLTITIPAVGQSVPVKQAGTFSIILLRPPKR
Ga0307315_100460791	3300028721	Soil	MDWTDTTEVPIRADAFDATERSFTSYRATESDDPRAKKAIKLESTGSYQRRGKGTQYDQQLEMTASGTRTAVHYLNPDGTLASARGSDAGDLTITIPAVGQSVPVKQAGTFSIILLRPPK
Ga0307280_102655401	3300028768	Soil	EVPIRADAFDATERALTNYRATDSDDPRAKKAIKLESSGTYERTGKGTQYDQQMEMTASGTRTAIHYLNPDGSLASAHGTDSGDLTITIPAVGQSVPVKQSGAYSITSLRPARR
Ga0307320_102423051	3300028771	Soil	RSSTLGDQVGSTVRSLFPGLPPGGVRTGMEWTDTTVVPMKADAFDATERAFTHYRAAESDDPRAKKAIKLESQGTYERSGKGTQFNQQLEMTATGTRSAAHYLSQDGYLVLAHGSDAGDMTITVPAVGQTVPVKQTGTYMITLLRQPKR
Ga0307320_102558882	3300028771	Soil	PGGVKAGMDWTDTTEVPIRADAFDATERSFTSYRATESDDPRAKKAIKLESTGSYQRRGKGTQYDQQLEMTASGTRTAVHYLNPDGTLASARGSDAGDLTITIPAVGQSVPVKQAGTFSIILLRPPKR
Ga0307305_100282811	3300028807	Soil	YRATESDDPRAKKAIKLESTGSYQRRGKGTQYDQQLEMTASGTRTAVHYMNPDGTLASARGSDAGDLTITIPAVGQTVPVKQAGTFSIILLRPPKR
Ga0307310_100265071	3300028824	Soil	FDAVERSLTTYHATDSDDPRAKKAIKLENQGTYQRTGKGTQYDQQLEMTASGSRTGVYYLNPDGTLASARGSDAGDMTITVPAVGQTVPVKQAGTYAITLSRQPRR
Ga0307312_101241803	3300028828	Soil	PLGGAKSGEEWTDTTEVPIRADAFDATERSLTNYRASDSDDPRAKKAIRLESTGSYERTGKGTQYDQQMEMTASGTRTAIHYLNPDGSLASAHGTDSGDLTITIPAVGQSVPVKQSGAYSITSLRPARR
Ga0307289_103622771	3300028875	Soil	GDQLGSNLRSLFPSLPSGGVKPGMEWTDTTEVPIRADAFDATERSFTSYRATESDDPRAKKAIKLESTGSYQRRGKGTQYDQQLEMTASGTRTAVHYLNPDGTLASARGSDAGDLTITIPAVGQSVPVKQAGTFSIILLRPPKR
Ga0307278_101328603	3300028878	Soil	SLPPGGVKAGMEWTDTTEVPIRADAFDATERSFTTYRATESDDPRAKKAIKLESTGSYQRRGKGTQYDQQLEMTASGTRTAVHYMNPDGTLASARGSDAGDLTITIPAVGQTVPVKQAGTFSITLLRPSKR
Ga0307300_101284751	3300028880	Soil	SALKVDRYTTLGDQLGSNLRSLFPSLPGGGVKAGMEWTDTTEVPIRADAFDATERSFTTYRATESDDPRAKKAIKLESTGSYQRRGKGTQYDQQLEMTASGTRTAVHYLNPDGTLASARGSDAGDLTITIPAVGQSVPVKQAGTFSIILLRPPKR
Ga0307308_103732922	3300028884	Soil	ATLTPDGKLSALKADRSSTMGDQVGSNLRTLFPALPPGGVRAGMEWTDSTEVPIRADAFDATERSLTNYRSMDSDDPNAKKAIKLESSGTYQRTGKGTQYDQKLEMTASGMRTSVYYLNPDGTLASAHGSDSGDMTITVPAVGQAVPVKQSGSYSITSLRSGKR
Ga0307304_103466161	3300028885	Soil	DQLGSNLRSLFPSLPPGGVKAGMEWTDTTEVPIRADAFDATERSFTNYRATESDDPRAKKAIKLESTGSYQRRGKGTQYDQQLEMTASGTRTAVHYMNPDGTLASARGSDAGDLTITIPAVGQTVPVKQAGTFSIILLRPPKR
Ga0299906_111057782	3300030606	Soil	TDTSEVPLKADAFVATERAVTSYRAVESDDPRARKGVRLESNGTYERTGKGTQFDQQLEMTASGMRWAVHHLSQDGVLVAAEGSDAGDMTITVPAVGQTVPVKQAGTYSITPLPQPRR
Ga0302046_113856311	3300030620	Soil	ADAFEATERALTTYRAVESDDSRNKKAVKLESNGSYERTGKGTQFDQQLEMTAAGTRSAVHYLSPDGFLISAQGTDAGDMTITVPAVGQTVPVKQTGTYSITSARMGKR
Ga0308187_100315163	3300031114	Soil	GMEWTDTTEVPIRADAFDATERSLTSYRATESDDPRAKKAIKLESTGSYQRRGKGTQYDQQLEMTASGTRTAVHYMNPDGTLASARGSDAGDLTITIPAVGQSVPVKQAGTFSITLLRPSKR
Ga0307408_1003432611	3300031548	Rhizosphere	RAVDSDDPNARKALKLESNGSYQRSGKGTQYDQKLEMTASGSRSAVHYISPDGTLASAQGNDAGDMTITVPAVGQTVPVKQAGSYSITLSRPPKK
Ga0307405_108669082	3300031731	Rhizosphere	MEWTDTTDVPVRADAFDASERGITRYRSTDSDEPRAKNAIKLESNGSYERKGKGVQFDQQLEMSGTGSRTAVHYFGQDGVLMSGRGQDAGEMTITVPAVGQTVPVKHSGSYTITSRAPPK
Ga0307413_100033337	3300031824	Rhizosphere	KPDGELSALRADRTTTLGDQIGSTLRTLFPSLPRGGVRSGMEWTDTTDVPIRADAFDATEHSLTKYRATDSDDARARQAIKLESTGTYQRSGKGTQYNQQLEMTASGTRSAVHYLNSDGTLASARGSDSGDMTITVPAVGQSVPVKQTGSYTITSLRQQKR
Ga0307413_114133012	3300031824	Rhizosphere	MEWTDTTDVPVRADAFDASERGITRYRSIDSDEPRAKNAIKLESNGSYERKGKGVQFDQQLEMSGTGSRAAVHYFGQDGVLMSGRGQDAGEMTITVPAVGQTVPVKHSGSYTITSRAPPK
Ga0307410_107692652	3300031852	Rhizosphere	SGVRTGMEWTDTTEVPIRADAFDAVERSLTKYRAMDSDDARAKNAVKLESSGTFRRSGKGTQYNQQLEMTASGTRSAVYYLNPDGTLASARGSDAGDMTITVPAVGQTVPVKQAGSYTITSLRPVKR
Ga0307410_121079512	3300031852	Rhizosphere	YRAVESDDPNARKALKLESSGTYQRSGKGTQYDQQLEMTASGNRSAVHYLNSDGTLASARGNDSGDMTIAVPAVGQTVPVKQAGSYTVTLFRQPKR
Ga0307406_101138401	3300031901	Rhizosphere	ATEHSLTKYRATDSDDARARQAIKLESTGTYQRSGKGTQYNQQLEMTASGTRSAVHYLNSDGTLASARGSDSGDMTITVPAVGQSVPVKQTGSYTITSLRQQKR
Ga0307407_111207602	3300031903	Rhizosphere	LGDQIGSNLRSLFPALPQGGVRSGMEWTDTTEVPIRADAFDAVERSLTRYRAVESDDPNARKALKLESSGTYQRSGKGTQYDQQLEMTASGNRSAVHYLNSDGTLASARGNDSGDMTIAVPAVGQTVPVKQAGSYTVTLFRQPKR
Ga0307412_110018932	3300031911	Rhizosphere	AGMEWTDTTDVPIRADAFDASERGVTRYRALKSDEPRAKDAIKLESNGSYDRKGKGMQFDQQLEMSATGSRTGVHYFGQDGILIAARGRDAGEMTITVPAVGQTVPVKQSGTYIIRSVGRPTTF
Ga0308175_1026416861	3300031938	Soil	KLPAGGVKAGMEWTDTSDVPVRADAFDALEHSLTNYRSAESDDPQAKKAIKLESTGSYQRKGKGTQYDQQMEMSSSGTRSSIYYLNADGTLASAHGSDTGDLTISIPAVGQTVPVKQTGSFTIRAVRPAKR
Ga0307409_1001255731	3300031995	Rhizosphere	VERSTTRYRAVDSDDPNARKALKLESNGSYQRSGKGTQYDQKLEMTASGSRSAVHYISPDGTLASAQGNDAGDMTITVPAVGQTVPVKQAGSYSITLSRPPKK
Ga0307409_1005202291	3300031995	Rhizosphere	AFDASERGITRYRSIDSDEPRAKNAIKLESNGSYERKGKGVQFDQQLEMSGTGSRTAVHYFGQDGVLMSGRGQDAGEMTITVPAVGQTVPVKHSGSYTITSRAPPKR
Ga0307416_1007581731	3300032002	Rhizosphere	TLDVPVRADAFDATERSLTSYRAIESDDPRLKKAVKLESTGSYQRKGKGTQYDQQLEMTASGTRSSIHYLNPDGTLAAARGSDAGDLTITIPAVGQTVPVKQAGTFTITSLRPAKR
Ga0307414_109229441	3300032004	Rhizosphere	AFDASERGITRYRSTDSDEPRAKNAIKLESNGSYERKGKGVQFDQQLEMSGTGSRAAVHYFGQDGVLMSGRGQDAGEMTITVPAVGQTVPVKHSGSYTITSRAPPKR
Ga0310810_113824622	3300033412	Soil	WTDTTEVPIRAEAFDATERSLASFHSTESDDPHAKKALKLEGRATFQRTGKGTQYDQQMEMTASGNRTAVYYLNPDGTLASAHGSDSGDMTITVPAVGQTVPVKQTGTYTITTTRSPAKH
Ga0370498_032871_719_1084	3300034155	Untreated Peat Soil	MEWTDTTDVPIRADAFDATEHGITSYRAVDSDDPRAKKAIKLESTGSYERTGKGVQFEQQLVMSGTGTRTAAHYLNQDGVLVSARGSDAGDMTISIPAVGQTVPVKQAGSYTITAIRLPK
Ga0364931_0095845_169_534	3300034176	Sediment	MEWTDTTDVPIRADAFDATEHGVTSYRAVDSDDPRAKKAIKLESNGSYERTGKGVQFEQQLEMSGRGTRTAVHYLSQDGALISARGSDAGDMTISVPAVGQTVPVKQAGSYTITAVRPPK

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F075846

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Structural matches with SCOPe domains

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences