NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome / Metatranscriptome Family F075845

Metagenome / Metatranscriptome Family F075845

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F075845
Family Type Metagenome / Metatranscriptome
Number of Sequences 118
Average Sequence Length 69 residues
Representative Sequence MQTLNVGAGRTDNEYQAAEEQRRADLLADSRSDANYFFWAAGLAALGTGLLPVRLNILVSIGAI
Number of Associated Samples 110
Number of Associated Scaffolds 118

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 62.07 %
% of genes near scaffold ends (potentially truncated) 90.68 %
% of genes from short scaffolds (< 2000 bps) 85.59 %
Associated GOLD sequencing projects 101
AlphaFold2 3D model prediction Yes
3D model pTM-score0.26

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Bacteria (92.373 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil
(10.169 % of family members)
Environment Ontology (ENVO) Unclassified
(27.119 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(62.712 % of family members)


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Multiple Sequence Alignments

Select alignment to view:      

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Transmembrane (alpha-helical) Signal Peptide: No Secondary Structure distribution: α-helix: 57.61%    β-sheet: 0.00%    Coil/Unstructured: 42.39%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.26
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 118 Family Scaffolds
PF01408GFO_IDH_MocA 3.39
PF01569PAP2 1.69
PF01243Putative_PNPOx 1.69
PF13620CarboxypepD_reg 1.69
PF00392GntR 1.69
PF14384BrnA_antitoxin 1.69
PF01180DHO_dh 1.69
PF00326Peptidase_S9 1.69
PF08238Sel1 0.85
PF11066DUF2867 0.85
PF03976PPK2 0.85
PF13432TPR_16 0.85
PF00581Rhodanese 0.85
PF13474SnoaL_3 0.85
PF00535Glycos_transf_2 0.85
PF15780ASH 0.85
PF03992ABM 0.85
PF06271RDD 0.85
PF14031D-ser_dehydrat 0.85
PF01850PIN 0.85
PF13517FG-GAP_3 0.85
PF01594AI-2E_transport 0.85
PF02811PHP 0.85
PF136402OG-FeII_Oxy_3 0.85
PF00210Ferritin 0.85
PF00753Lactamase_B 0.85
PF12704MacB_PCD 0.85
PF00905Transpeptidase 0.85
PF01548DEDD_Tnp_IS110 0.85
PF02861Clp_N 0.85
PF01648ACPS 0.85
PF04366Ysc84 0.85
PF00171Aldedh 0.85
PF08530PepX_C 0.85
PF12867DinB_2 0.85
PF07366SnoaL 0.85
PF00587tRNA-synt_2b 0.85
PF13411MerR_1 0.85

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 118 Family Scaffolds
COG0042tRNA-dihydrouridine synthaseTranslation, ribosomal structure and biogenesis [J] 1.69
COG0069Glutamate synthase domain 2Amino acid transport and metabolism [E] 1.69
COG0167Dihydroorotate dehydrogenaseNucleotide transport and metabolism [F] 1.69
COG1304FMN-dependent dehydrogenase, includes L-lactate dehydrogenase and type II isopentenyl diphosphate isomeraseEnergy production and conversion [C] 1.69
COG2070NAD(P)H-dependent flavin oxidoreductase YrpB, nitropropane dioxygenase familyGeneral function prediction only [R] 1.69
COG0014Gamma-glutamyl phosphate reductaseAmino acid transport and metabolism [E] 0.85
COG0542ATP-dependent Clp protease, ATP-binding subunit ClpAPosttranslational modification, protein turnover, chaperones [O] 0.85
COG0628Predicted PurR-regulated permease PerMGeneral function prediction only [R] 0.85
COG1012Acyl-CoA reductase or other NAD-dependent aldehyde dehydrogenaseLipid transport and metabolism [I] 0.85
COG1714Uncharacterized membrane protein YckC, RDD familyFunction unknown [S] 0.85
COG2326Polyphosphate kinase 2, PPK2 familyEnergy production and conversion [C] 0.85
COG2930Lipid-binding SYLF domain, Ysc84/FYVE familyLipid transport and metabolism [I] 0.85
COG2936Predicted acyl esteraseGeneral function prediction only [R] 0.85
COG3547TransposaseMobilome: prophages, transposons [X] 0.85
COG4230Delta 1-pyrroline-5-carboxylate dehydrogenaseAmino acid transport and metabolism [E] 0.85

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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms92.37 %
UnclassifiedrootN/A7.63 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
2170459024|GZTSFBX01A50CNAll Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium511Open in IMG/M
3300002076|JGI24749J21850_1023909All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium869Open in IMG/M
3300002245|JGIcombinedJ26739_100429762All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1198Open in IMG/M
3300002914|JGI25617J43924_10204346All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium657Open in IMG/M
3300004479|Ga0062595_100007218All Organisms → cellular organisms → Bacteria → Acidobacteria3372Open in IMG/M
3300004799|Ga0058863_11746879All Organisms → cellular organisms → Bacteria864Open in IMG/M
3300005174|Ga0066680_10040025All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia2707Open in IMG/M
3300005181|Ga0066678_10334933All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium996Open in IMG/M
3300005344|Ga0070661_100223092All Organisms → cellular organisms → Bacteria → Acidobacteria1446Open in IMG/M
3300005439|Ga0070711_100799523All Organisms → cellular organisms → Bacteria800Open in IMG/M
3300005468|Ga0070707_100115202All Organisms → cellular organisms → Bacteria2609Open in IMG/M
3300005542|Ga0070732_10385861Not Available844Open in IMG/M
3300005554|Ga0066661_10770389All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium563Open in IMG/M
3300005557|Ga0066704_10188093All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1394Open in IMG/M
3300005559|Ga0066700_10014129All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter4270Open in IMG/M
3300005561|Ga0066699_11056875All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium561Open in IMG/M
3300005591|Ga0070761_10448441All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium791Open in IMG/M
3300005614|Ga0068856_100786150All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium972Open in IMG/M
3300005764|Ga0066903_106102499All Organisms → cellular organisms → Bacteria630Open in IMG/M
3300005901|Ga0075274_1085340All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium522Open in IMG/M
3300006804|Ga0079221_11478477Not Available544Open in IMG/M
3300009012|Ga0066710_101840401All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium911Open in IMG/M
3300009012|Ga0066710_103907936All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium558Open in IMG/M
3300009162|Ga0075423_13139005All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium506Open in IMG/M
3300009177|Ga0105248_10107950All Organisms → cellular organisms → Bacteria3139Open in IMG/M
3300010343|Ga0074044_10296027Not Available1065Open in IMG/M
3300010358|Ga0126370_10470731All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1053Open in IMG/M
3300010360|Ga0126372_13141709All Organisms → cellular organisms → Bacteria513Open in IMG/M
3300010361|Ga0126378_12101186All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium644Open in IMG/M
3300010361|Ga0126378_12497573All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium590Open in IMG/M
3300010366|Ga0126379_12377109All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium630Open in IMG/M
3300010373|Ga0134128_11857720Not Available663Open in IMG/M
3300010376|Ga0126381_100750361All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Angelobacter → unclassified Candidatus Angelobacter → Candidatus Angelobacter sp. Gp1-AA1171399Open in IMG/M
3300010376|Ga0126381_104572853All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium534Open in IMG/M
3300010379|Ga0136449_101105930All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1261Open in IMG/M
3300011120|Ga0150983_16651825All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium750Open in IMG/M
3300011269|Ga0137392_10891887All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium732Open in IMG/M
3300011270|Ga0137391_11169897All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium617Open in IMG/M
3300012189|Ga0137388_11397752All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium639Open in IMG/M
3300012205|Ga0137362_11487087All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium564Open in IMG/M
3300012206|Ga0137380_10753501All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium843Open in IMG/M
3300012210|Ga0137378_10859751All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium820Open in IMG/M
3300012351|Ga0137386_10456233All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium921Open in IMG/M
3300012923|Ga0137359_10264128All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1535Open in IMG/M
3300012944|Ga0137410_11746131All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium548Open in IMG/M
3300012944|Ga0137410_12045905All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium510Open in IMG/M
3300012955|Ga0164298_10168227All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1250Open in IMG/M
3300012971|Ga0126369_13001326All Organisms → cellular organisms → Bacteria552Open in IMG/M
3300012971|Ga0126369_13116459Not Available543Open in IMG/M
3300014501|Ga0182024_10615356All Organisms → cellular organisms → Bacteria → Acidobacteria1357Open in IMG/M
3300014654|Ga0181525_10707868All Organisms → cellular organisms → Bacteria565Open in IMG/M
3300014655|Ga0181516_10689637All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium529Open in IMG/M
3300015261|Ga0182006_1165735All Organisms → cellular organisms → Bacteria → Acidobacteria742Open in IMG/M
3300015262|Ga0182007_10087924All Organisms → cellular organisms → Bacteria → Acidobacteria1022Open in IMG/M
3300016422|Ga0182039_12061060All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium525Open in IMG/M
3300017959|Ga0187779_10483015All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium818Open in IMG/M
3300017970|Ga0187783_10014932All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium5728Open in IMG/M
3300017975|Ga0187782_10108077All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium2050Open in IMG/M
3300017975|Ga0187782_10325488All Organisms → cellular organisms → Bacteria1161Open in IMG/M
3300018001|Ga0187815_10517169All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium512Open in IMG/M
3300018044|Ga0187890_10095311All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis1732Open in IMG/M
3300018468|Ga0066662_12405077All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium554Open in IMG/M
3300020581|Ga0210399_10352690All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1228Open in IMG/M
3300021181|Ga0210388_11296112All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium615Open in IMG/M
3300021401|Ga0210393_10036517All Organisms → cellular organisms → Bacteria3849Open in IMG/M
3300021420|Ga0210394_10600973All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium967Open in IMG/M
3300021479|Ga0210410_11466084All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium575Open in IMG/M
3300021559|Ga0210409_11456499All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium561Open in IMG/M
3300021560|Ga0126371_13463271All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium533Open in IMG/M
3300025527|Ga0208714_1010634All Organisms → cellular organisms → Bacteria → Acidobacteria2383Open in IMG/M
3300025905|Ga0207685_10588914All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium596Open in IMG/M
3300025909|Ga0207705_10609818All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium849Open in IMG/M
3300025916|Ga0207663_10750508All Organisms → cellular organisms → Bacteria775Open in IMG/M
3300025920|Ga0207649_10169018All Organisms → cellular organisms → Bacteria → Acidobacteria1521Open in IMG/M
3300025922|Ga0207646_10091521All Organisms → cellular organisms → Bacteria2722Open in IMG/M
3300025922|Ga0207646_11799922All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium524Open in IMG/M
3300026078|Ga0207702_10939321All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium857Open in IMG/M
3300026214|Ga0209838_1041141All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium672Open in IMG/M
3300026281|Ga0209863_10172642All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium630Open in IMG/M
3300026301|Ga0209238_1255143All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium523Open in IMG/M
3300026304|Ga0209240_1026606All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis2213Open in IMG/M
3300026312|Ga0209153_1099705All Organisms → cellular organisms → Bacteria1090Open in IMG/M
3300026328|Ga0209802_1072784All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia1619Open in IMG/M
3300026329|Ga0209375_1184093All Organisms → cellular organisms → Bacteria820Open in IMG/M
3300026332|Ga0209803_1053640All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium1772Open in IMG/M
3300026523|Ga0209808_1033992All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium2436Open in IMG/M
3300026530|Ga0209807_1049559All Organisms → cellular organisms → Bacteria1943Open in IMG/M
3300026551|Ga0209648_10537747All Organisms → cellular organisms → Bacteria658Open in IMG/M
3300027158|Ga0208725_1024519All Organisms → cellular organisms → Bacteria → Acidobacteria965Open in IMG/M
3300027376|Ga0209004_1046794All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Angelobacter → unclassified Candidatus Angelobacter → Candidatus Angelobacter sp. Gp1-AA117724Open in IMG/M
3300027567|Ga0209115_1036516All Organisms → cellular organisms → Bacteria1114Open in IMG/M
3300027609|Ga0209221_1116551All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium679Open in IMG/M
3300027633|Ga0208988_1112671All Organisms → cellular organisms → Bacteria670Open in IMG/M
3300027652|Ga0209007_1069802All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium887Open in IMG/M
3300027681|Ga0208991_1067427All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium KBS 831079Open in IMG/M
3300027767|Ga0209655_10147745All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium778Open in IMG/M
3300027829|Ga0209773_10121453All Organisms → cellular organisms → Bacteria → Acidobacteria1083Open in IMG/M
3300027842|Ga0209580_10144761Not Available1167Open in IMG/M
3300027853|Ga0209274_10044349All Organisms → cellular organisms → Bacteria2098Open in IMG/M
3300027869|Ga0209579_10475149All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium679Open in IMG/M
3300027895|Ga0209624_10400056All Organisms → cellular organisms → Bacteria → Acidobacteria916Open in IMG/M
3300027903|Ga0209488_10850661All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales643Open in IMG/M
3300028801|Ga0302226_10044530All Organisms → cellular organisms → Bacteria → Acidobacteria2144Open in IMG/M
3300028906|Ga0308309_10259622All Organisms → cellular organisms → Bacteria → Acidobacteria1456Open in IMG/M
3300030114|Ga0311333_10063153All Organisms → cellular organisms → Bacteria2685Open in IMG/M
3300030520|Ga0311372_12453127All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium588Open in IMG/M
3300030760|Ga0265762_1038912All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → unclassified Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter sp. SbA7925Open in IMG/M
3300031231|Ga0170824_106286022Not Available827Open in IMG/M
3300031716|Ga0310813_10562830All Organisms → cellular organisms → Bacteria1004Open in IMG/M
3300031720|Ga0307469_10479921All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1084Open in IMG/M
3300032001|Ga0306922_12354826All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium509Open in IMG/M
3300032180|Ga0307471_102758739All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium623Open in IMG/M
3300032782|Ga0335082_11007593All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium697Open in IMG/M
3300032805|Ga0335078_10944851All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1029Open in IMG/M
3300033486|Ga0316624_10680786All Organisms → cellular organisms → Bacteria903Open in IMG/M
3300034124|Ga0370483_0047520All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1345Open in IMG/M


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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil10.17%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil9.32%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil9.32%
Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil8.47%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil5.93%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil5.08%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere5.08%
Tropical PeatlandEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland3.39%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil2.54%
Surface SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil2.54%
SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Soil2.54%
SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Soil2.54%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere2.54%
Bog Forest SoilEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil1.69%
BogEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Bog1.69%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil1.69%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil1.69%
PalsaEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa1.69%
Corn RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere1.69%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere1.69%
RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere1.69%
PeatlandEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Peatland0.85%
Freshwater SedimentEnvironmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment0.85%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil0.85%
Grass SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Grass Soil0.85%
Peatlands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil0.85%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil0.85%
Agricultural SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil0.85%
Arctic Peat SoilEnvironmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil0.85%
Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil0.85%
Untreated Peat SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil0.85%
Rice Paddy SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Rice Paddy Soil0.85%
Bog Forest SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil0.85%
SoilEnvironmental → Terrestrial → Soil → Wetlands → Permafrost → Soil0.85%
Prmafrost SoilEnvironmental → Terrestrial → Soil → Wetlands → Permafrost → Prmafrost Soil0.85%
PermafrostEnvironmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost0.85%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil0.85%
FenEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Fen0.85%
Host-AssociatedHost-Associated → Human → Digestive System → Large Intestine → Fecal → Host-Associated0.85%
Corn, Switchgrass And Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere0.85%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere0.85%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
2170459024Grass soil microbial communities from Rothamsted Park, UK - FD1 (NaCl 300g/L 5ml)EnvironmentalOpen in IMG/M
3300002076Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3Host-AssociatedOpen in IMG/M
3300002245Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)EnvironmentalOpen in IMG/M
3300002914Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cmEnvironmentalOpen in IMG/M
3300004479Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAsEnvironmentalOpen in IMG/M
3300004799Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - soil CB-3 (Metagenome Metatranscriptome)Host-AssociatedOpen in IMG/M
3300005174Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129EnvironmentalOpen in IMG/M
3300005181Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127EnvironmentalOpen in IMG/M
3300005344Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaGHost-AssociatedOpen in IMG/M
3300005439Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaGEnvironmentalOpen in IMG/M
3300005468Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaGEnvironmentalOpen in IMG/M
3300005542Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1EnvironmentalOpen in IMG/M
3300005554Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110EnvironmentalOpen in IMG/M
3300005557Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153EnvironmentalOpen in IMG/M
3300005559Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149EnvironmentalOpen in IMG/M
3300005561Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148EnvironmentalOpen in IMG/M
3300005591Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1EnvironmentalOpen in IMG/M
3300005614Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2Host-AssociatedOpen in IMG/M
3300005764Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)EnvironmentalOpen in IMG/M
3300005901Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_5C_80N_201EnvironmentalOpen in IMG/M
3300006804Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200EnvironmentalOpen in IMG/M
3300006904Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3Host-AssociatedOpen in IMG/M
3300009012Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159EnvironmentalOpen in IMG/M
3300009162Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2Host-AssociatedOpen in IMG/M
3300009177Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaGHost-AssociatedOpen in IMG/M
3300010343Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM1EnvironmentalOpen in IMG/M
3300010358Tropical forest soil microbial communities from Panama - MetaG Plot_3EnvironmentalOpen in IMG/M
3300010360Tropical forest soil microbial communities from Panama - MetaG Plot_6EnvironmentalOpen in IMG/M
3300010361Tropical forest soil microbial communities from Panama - MetaG Plot_23EnvironmentalOpen in IMG/M
3300010366Tropical forest soil microbial communities from Panama - MetaG Plot_24EnvironmentalOpen in IMG/M
3300010373Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4EnvironmentalOpen in IMG/M
3300010376Tropical forest soil microbial communities from Panama - MetaG Plot_28EnvironmentalOpen in IMG/M
3300010379Sb_50d combined assemblyEnvironmentalOpen in IMG/M
3300011120Combined assembly of Microbial Forest Soil metaTEnvironmentalOpen in IMG/M
3300011269Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaGEnvironmentalOpen in IMG/M
3300011270Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaGEnvironmentalOpen in IMG/M
3300012189Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaGEnvironmentalOpen in IMG/M
3300012205Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaGEnvironmentalOpen in IMG/M
3300012206Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaGEnvironmentalOpen in IMG/M
3300012210Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaGEnvironmentalOpen in IMG/M
3300012351Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_100_16 metaGEnvironmentalOpen in IMG/M
3300012923Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaGEnvironmentalOpen in IMG/M
3300012944Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012955Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MGEnvironmentalOpen in IMG/M
3300012971Tropical forest soil microbial communities from Panama - MetaG Plot_1EnvironmentalOpen in IMG/M
3300014501Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (Illumina Assembly)EnvironmentalOpen in IMG/M
3300014654Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin06_10_metaGEnvironmentalOpen in IMG/M
3300014655Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin01_10_metaGEnvironmentalOpen in IMG/M
3300015261Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-104_1 MetaGHost-AssociatedOpen in IMG/M
3300015262Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaGHost-AssociatedOpen in IMG/M
3300016422Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111EnvironmentalOpen in IMG/M
3300017959Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_10_MGEnvironmentalOpen in IMG/M
3300017970Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP02_20_MGEnvironmentalOpen in IMG/M
3300017975Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP15_20_MGEnvironmentalOpen in IMG/M
3300018001Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW-S_5EnvironmentalOpen in IMG/M
3300018044Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_21_10EnvironmentalOpen in IMG/M
3300018468Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111EnvironmentalOpen in IMG/M
3300020581Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-MEnvironmentalOpen in IMG/M
3300021181Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-OEnvironmentalOpen in IMG/M
3300021401Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-OEnvironmentalOpen in IMG/M
3300021420Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-MEnvironmentalOpen in IMG/M
3300021479Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-MEnvironmentalOpen in IMG/M
3300021559Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-MEnvironmentalOpen in IMG/M
3300021560Tropical forest soil microbial communities from Panama - MetaG Plot_4EnvironmentalOpen in IMG/M
3300025527Arctic peat soil from Barrow, Alaska - NGEE Surface sample 415-1 shallow-072012 (SPAdes)EnvironmentalOpen in IMG/M
3300025905Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025909Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025916Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025920Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025922Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300026078Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026214Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 2 DNA2013-047 (SPAdes)EnvironmentalOpen in IMG/M
3300026281Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 1 DNA2013-046 (SPAdes)EnvironmentalOpen in IMG/M
3300026301Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_1_20cm (SPAdes)EnvironmentalOpen in IMG/M
3300026304Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_80cm (SPAdes)EnvironmentalOpen in IMG/M
3300026312Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_120 (SPAdes)EnvironmentalOpen in IMG/M
3300026328Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129 (SPAdes)EnvironmentalOpen in IMG/M
3300026329Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_131 (SPAdes)EnvironmentalOpen in IMG/M
3300026332Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138 (SPAdes)EnvironmentalOpen in IMG/M
3300026523Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157 (SPAdes)EnvironmentalOpen in IMG/M
3300026530Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_154 (SPAdes)EnvironmentalOpen in IMG/M
3300026551Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm (SPAdes)EnvironmentalOpen in IMG/M
3300027158Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF011 (SPAdes)EnvironmentalOpen in IMG/M
3300027376Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_RefH0_M1 (SPAdes)EnvironmentalOpen in IMG/M
3300027567Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O2 (SPAdes)EnvironmentalOpen in IMG/M
3300027609Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_O2 (SPAdes)EnvironmentalOpen in IMG/M
3300027633Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA Ref_M1 (SPAdes)EnvironmentalOpen in IMG/M
3300027652Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM1H0_O2 (SPAdes)EnvironmentalOpen in IMG/M
3300027681Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM3_M2 (SPAdes)EnvironmentalOpen in IMG/M
3300027767Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP03_OM2 (SPAdes)EnvironmentalOpen in IMG/M
3300027829Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP14_OM1 (SPAdes)EnvironmentalOpen in IMG/M
3300027842Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1 (SPAdes)EnvironmentalOpen in IMG/M
3300027853Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1 (SPAdes)EnvironmentalOpen in IMG/M
3300027869Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1 (SPAdes)EnvironmentalOpen in IMG/M
3300027895Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O1 (SPAdes)EnvironmentalOpen in IMG/M
3300027903Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)EnvironmentalOpen in IMG/M
3300028801Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E3_3EnvironmentalOpen in IMG/M
3300028906Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)EnvironmentalOpen in IMG/M
3300030114I_Fen_E2 coassemblyEnvironmentalOpen in IMG/M
3300030520III_Palsa_N2 coassemblyEnvironmentalOpen in IMG/M
3300030760Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI4 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300031231Coassembly Site 11 (all samples) - Champenoux / Amance forestEnvironmentalOpen in IMG/M
3300031716Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YN3EnvironmentalOpen in IMG/M
3300031720Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515EnvironmentalOpen in IMG/M
3300032001Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)EnvironmentalOpen in IMG/M
3300032180Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515EnvironmentalOpen in IMG/M
3300032782Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.1EnvironmentalOpen in IMG/M
3300032805Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.2EnvironmentalOpen in IMG/M
3300033486Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_N3_C1_D5_AEnvironmentalOpen in IMG/M
3300034124Peat soil microbial communities from wetlands in Alaska, United States - Goldstream_06D_14EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
FD1_058139802170459024Grass SoilMQTLNVGAGRTDEEYKAAEESRRADLRSDVQTYAFYFFVAAGLAAVGTGLLLFKLNIIVNIG
JGI24749J21850_102390913300002076Corn, Switchgrass And Miscanthus RhizosphereMQTLNVGXGRTENEYKAAEEQRRADLRASSREDANYFFWAAGFAALSAGLLPVRVGFLIQIGTFELLNAY
JGIcombinedJ26739_10042976233300002245Forest SoilMQTLNVGAGRTDEEYKAAEDHRRADLLADSRSDANYLFWAAALAALASGLFPVQGNF
JGI25617J43924_1020434613300002914Grasslands SoilMQTLNVGAGRTDTEYKEAEEQRRADLRADSRSDANFFFWAAGLAALGTGLLLVRLNIFVSVGTIDFLSFYGRPLGPLYPLAVHGAAF
Ga0062595_10000721813300004479SoilMLLSSRTQSGSGGGTRMQTLNVGAGRSDTEYKAAEEQRRADLRADSVNDANYFFWAAGLAALGTGLLPVRLNIFVTIGTIDLLAFY
Ga0058863_1174687913300004799Host-AssociatedMQTLNVGAGQSDTDYKESQKLQREDLLSEARDAANYFFGAAGLAALGTGLLPIRINIFVSIGCVDLMAFYGRSW
Ga0066680_1004002543300005174SoilMQTLNVGAGRTEDEYKAAEEQRRADLRDESRSDANYFFLAAGLAALGTGLFPVRLGFFVSIGAVDLLSRYGGPLGQLYPF
Ga0066678_1033493313300005181SoilMQTLNVSAGRTDDEYQVAEEQRRADLLADSRSDANYFFWAAGLAALGTGLLPVRLNILVSIG
Ga0070661_10022309213300005344Corn RhizosphereMLLSSRTQSGSGGGTRMQTLNVGAGRSDTEYKAAEEQRRADLRADSVNDANYFFWAAGLAALGTGLLPVRLNIFVTIGTIDLLAFYGRPLGQLH
Ga0070711_10079952313300005439Corn, Switchgrass And Miscanthus RhizosphereMQTLNVGAGRTDEEYKAAEEQRRAELRSDVQTYAMYFFVAAGLAGLGTGLLPLRLFGLVNIGAIDILTFYGG
Ga0070707_10011520233300005468Corn, Switchgrass And Miscanthus RhizosphereMQTLNVGAGRTDNEYKAAEAQRRADLRDDSRSDANYFFWAAGMAALGNGLLPVRLNILVNIGAFDLLPY
Ga0070732_1038586123300005542Surface SoilMQTLNVGAGQTDQEYQAAEEQRRTDLRSESRTDANYFFVAAVLAALGTGLFAVRVSLFFSIGAIDLLAFNRGAFGQFPTLV
Ga0066661_1077038913300005554SoilMQTLNVGAGRTDQEYEAAEEQRRTERADSRSDANYFFWAAGLAALGTGLLPVRL
Ga0066704_1018809313300005557SoilMQTLNVGAGRTEDEYKAAEEQRRADLRDESRSDANYFFLAAGLAALGTGLFPVRLGFFVSIGAVDLLSRYGGPLGQLYPFAMYSAAA
Ga0066700_1001412913300005559SoilMETLNVGAGRTDNEYKAAEEQRRADLRDDSRSDANYFFWAAGLAALGTGLLPVRL
Ga0066699_1105687513300005561SoilMQTLNVGAGRTDEEYKETEEKRRADLRADSQSDANFFFWAAGLAVLGTGLLPIRLNIFVSIGAIDLLSFYGRSLGPVYSALLQLAS
Ga0070761_1044844113300005591SoilMQTLNVGAGRTDKEYEAAEEQRRADLRADSRTDADYFFWAAGLAALGTGVLPVRLNMLVN
Ga0068856_10078615013300005614Corn RhizosphereMRTLNIGTGQTDQEYKAADEQRRADLRADSRSDANYFFLAAGLAALGTGLLPVRLNILVSIGAIELLTFYGRSLGQVYP
Ga0066903_10610249913300005764Tropical Forest SoilMQTLNVGAGRSDEEYKAAEQQRRADLRAESINDANYFFLAAALAGLGTGLFPLRVGIFVNIGAIDLLALYAHVRSL
Ga0075274_108534023300005901Rice Paddy SoilMQTLNVGAGRSDAEYKATEEQRRADLWAEARSDANYFFWAAGLALFGAGILPVKINILVSIGAIDLLWLYGRSLGVLFVVALYVAAVSWL
Ga0079221_1147847713300006804Agricultural SoilMQTLNVGAGRTDEEYQAAEESRREELRGDVQTSAFYFFIAAICASLGTGVLLI
Ga0075424_10068077813300006904Populus RhizosphereMQTLNVGAGRSNEEYKAAEEQRRADLRSDIQSYAMYFFVAAGLAGLGTGLVPILLP
Ga0066710_10184040133300009012Grasslands SoilMQTLNVSAGRTDEEYKATEEQQRADLRSDCRDDANYFFWAAGLSALGTGLLPVRLNLLVSIG
Ga0066710_10390793613300009012Grasslands SoilMQTLNVGAGRTDDEYQVAEEQRRADLLADSRSDANYFFWAAGLAALGTGLLPVRLNILVSIGAIDLLRF
Ga0075423_1313900513300009162Populus RhizosphereMQTLNVGAGRTDEDYNASEEKRRADLLAESRSDANYFFWAAGLSALGTSLLPMLVNLPVSIGTVDLLTL
Ga0105248_1010795033300009177Switchgrass RhizosphereMQTLNVGAGRSDTEYKAAEEQRRADLRADSVNDANYFFWAAGLAALGTGLLPVRLNIFVTIGTIDLLAFYG*
Ga0074044_1029602713300010343Bog Forest SoilMQTLNVAAGRTDTEYKAAEEQRRADLCAESRSDANYFFWAAGLAALGTGLLPVRLNVL
Ga0126370_1047073113300010358Tropical Forest SoilMQTLNVGAGRTDEEYKAAEEQRRVDLRDDIQTDALYFFVAAGLVGLGSGLLLPVRLNFLVNIGTI
Ga0126372_1314170913300010360Tropical Forest SoilMQTLNVGAGRTDQEYKAAEEQRRADLLCESQSDANYFFVAALLAALGSGLFLVRVGIFVNIGAIDLLALYAHLHGLALTGA
Ga0126378_1210118613300010361Tropical Forest SoilMQTLNVGAGRTDEEYRAAEEQRRADLQADSRSNANYFFVAAALAALGTGLLPLRLNIIVSIGSIDL
Ga0126378_1249757313300010361Tropical Forest SoilMQTLNVGAGRTDEEYKAAEEQHRADLRADSRSNANYFFVAAALAALGTGLLPLRLNIIVSIGSIDLLTAYAHQW
Ga0126379_1237710923300010366Tropical Forest SoilMQTLNVGAGRTDDEYKEAQELHREELREDSQSDANYFFWAAGLAATSSGMLPVRINFLINIGLFDLRASMGGASAKSIP*
Ga0134128_1185772023300010373Terrestrial SoilMQTLNVGAGRTDQEYQAAEESRRDELRGEVQSSAFYFFVAAICAGLGSGVLLIRLPLIVNIGA
Ga0126381_10075036113300010376Tropical Forest SoilMQTLNVGAGRTDEEYKASEEQRRAELLAESQTDAMYFFVAAGLAGLGSGLLFIRLN
Ga0126381_10457285323300010376Tropical Forest SoilMQTLNVGAGRTDEEYKAAEEQHRADLRADSRSNANYFFVAAALAALGTWLLPLRL
Ga0136449_10110593013300010379Peatlands SoilMQTLNVGAGRTDKEYKAAEEQRRADLRFDSRGDANYFFWAAGLAALGTGLLPVRLNILVSIGAFDLLSLYGRPLGPLYPLAMYG
Ga0150983_1665182513300011120Forest SoilMQTLNVGAGRTDKEYKEAEEQRRADLLADSRNDANYFFLAAGLAALGTGLLPVRLNIFVSIGVLD
Ga0137392_1089188723300011269Vadose Zone SoilMQTLNVGAGRTDKEHNAAEEQRRADLRADSRSYANYFFWAAGLAALGTGLLPVRLNIFVS
Ga0137391_1116989713300011270Vadose Zone SoilMQTLNVGAGRTDDEYKAAEEQRRADLRDDSRSDANYFFWAAGLAALGTGLLPVR
Ga0137388_1139775223300012189Vadose Zone SoilMQTLNVGAGRTNEEYKAAEEHRRADLQADSQSDANYFFVAAGLAGLGTGLLPIRLNIFVSVGAIDLLNLYGG
Ga0137362_1148708723300012205Vadose Zone SoilMQTLNVGAGRTDTEYKAAENERRADLRAESKSDANYFFWAAGLAALGTGLLPIRLNILVSIGAVDLLAFYGRSLGPFYPLVLYG
Ga0137380_1075350113300012206Vadose Zone SoilMQTLNVGAGRSDREYKAAEEQRRADLRADSVSDANYFFWAAGLAAIGTGLFPVRLNIFVTIGTIDLLTFYARQLGQL
Ga0137378_1085975113300012210Vadose Zone SoilMQTLNVGAGRTDEEHKATEEQRRADLRSDCRDDANYFFWAAGLSALGTGLLPVRLNLLVSIGTVDLLTLYGRSLGPFYPLAVFSLAAMCYLSC*
Ga0137386_1045623323300012351Vadose Zone SoilMQTLNVGAGRTDDEYQVAEEQRRADLLADSRSDANYFFWAAGLAALGTGLLPVRLNILV
Ga0137359_1026412833300012923Vadose Zone SoilMQTLNVGAGRTDDEYRAAGEQRLADLRDESRGDANYFFWAAGLAALGTGLLPVRVNILVSIGAVDLLRIYGRGLVLIYPFAP*
Ga0137410_1174613123300012944Vadose Zone SoilMQTLNVGAGRTDNEYQAAEEQRRADLLADSRSDANYFFWAAGLAALGTGLLPVRLNILVSIGAIDLLRFYGRPLGQLYPLVMY
Ga0137410_1204590523300012944Vadose Zone SoilMQTLNVGAGRTDEEYKAAEEQRRADLRSDVQTYAFHFFVAAGLAAVGTGLILFKLNIIVNIG
Ga0164298_1016822713300012955SoilMQTLNVGAGRSDQEYKAAEEQRLADLRSDVQTYAMYFFVAAGLAGLGTGLLPIRLFAFVNIGFIDL
Ga0126369_1300132623300012971Tropical Forest SoilMQTLNVGAGRSDEEYKAAEQQRRADLRAESINDANYFFLAAALAGLGTGLFPLRVGIFVNIG
Ga0126369_1311645913300012971Tropical Forest SoilMQTLNVGAGRTDDEYKAAEEQRRANLRAESRSDANYFFVAALLAALGSGLFLVRVGIFVNIGAIDLL
Ga0182024_1061535623300014501PermafrostMQTLNVGAGQTDKEYNAAEEQRRGDLRDDSRSDANYFFWAAGLAAVGSGLFPVRLNILVSIGAFDLLSLYGKSLGPVAVD
Ga0181525_1070786813300014654BogMQTLNVGAGRTDDEYKAAEQQRRADLLAESKSDANYFFWAAGLAALGTGLLSVRLNILVSLGVFD
Ga0181516_1068963713300014655BogMQTLNVGAGRTDQEYLASEEGRRADLRADSQNDANYFFWAAGVILLGTDLLPVRLNI
Ga0182006_116573523300015261RhizosphereMQTLNVRAGQTDEEYQAAAEQQRNELRSDSIGDANLFFVAAGLAALGTGLLPIRLNFIVS
Ga0182007_1008792413300015262RhizosphereMQTLNVRAGQTDEEYQAAAEQQRNELRSDSIGDANLFFVAAGLAALGTGLLPI
Ga0182039_1206106013300016422SoilMQTLNVGAGRTDEEYKAAEEQRREELRGDVQTYAMYFFVAAGLAGLGTGLLPIRLFGLVNIGAIDLLTFYGGELVRL
Ga0187779_1048301523300017959Tropical PeatlandMQTLNVGAGLTDNEYKEAEQVRRAQLREDARSEANYLFVAAGLAALGTGLLPIRLNVLVTIGAVDLLTFYGRVYGPLYPVVVLGT
Ga0187783_1001493283300017970Tropical PeatlandMQALNVGAGRMDEEYRATEEQRRADLRAESRDDANYFFWAAGLSAHGTGLLPVRLNLLSTIDFYH
Ga0187782_1010807723300017975Tropical PeatlandMQALNVGAGRTDEEYRATEEQRRAGLRAESRDDANYFFWAAGLSAHGTGLLPVRLNLLSTIDFYH
Ga0187782_1032548813300017975Tropical PeatlandMQTLNVGAGRTDEEYKASEEQRRADLRDDSRSDANYFFWAAGLSALGTGLLPVRVNLLVSIGVVDLLTLYGRTLGPL
Ga0187815_1051716913300018001Freshwater SedimentMQTLNVGAGRTDEEYRATEEQRLADLRSDSRSDANYFFLAAGLSALGTGLLPVRLNLLVSIGTVDLLTLYGRP
Ga0187890_1009531113300018044PeatlandMQTLNVGAGRTDEEYKASEEQRRAELLSDIRSDANYFFWAAALSALGTGLLPVRLNLLVSIGTVDLLTLYGRPLGPLYSL
Ga0066662_1240507723300018468Grasslands SoilMQTLNVSAGRSDTEYKAAEEQRRTDLRADSVSDANYFFWAAGLAALGTGLLPVRLNIFVTIGTIDLLTFYGRPLGQLHPL
Ga0210399_1035269033300020581SoilMSRRVVCSPMQILNVGAGRTENEYKAAEEQRRADLRADSRENANYFFWAAGLAAISSGVLPVVR
Ga0210388_1129611213300021181SoilVQTLNVGAGRTDEEYKEAEEQRRADLVADSRTDANYFFLAAGLAALGTGLLPVRLNIFVSIGVLDLLGL
Ga0210393_1003651773300021401SoilMQTLNVGAGRTDKEYKEAEEQRRADLLADSRNDANYFFLAAGLAALGTGLLPVRLNIFVSIGVLDLLGLYSRSLSPIY
Ga0210394_1060097323300021420SoilMQTLNVGAGQTDAEYDASEEQRRADLRADSRTDANYFFWAAGLSALGTGLLPVRLNLLVSVGTVDLLTLYG
Ga0210410_1146608413300021479SoilMQTLNVGAGRTDQEYKEAEEQRRADLVADSRGDANYFFWAAGLAAIGTGLLPVRLNILVSIGLFDLLRFYGRPLD
Ga0210409_1145649923300021559SoilMQTLNVGAGQTDHEYKEAEQQRLADLRADSQNASNYFFWAAGLAALGTGLLPVRMSFLFNIGMIDLLNFYGRSTGSFHGRGGMV
Ga0126371_1052680923300021560Tropical Forest SoilVQTLNVGAGRTDQEYKAAEDEHRADLLAESRNNANYFFIAAVLAGIGCGLFLFR
Ga0126371_1346327113300021560Tropical Forest SoilMQTLNVGAGQSDADYKESQQQRREDLLSEAREAANYFFWAAGLAALGTGLLPIRINIFVSIGCFDL
Ga0208714_101063423300025527Arctic Peat SoilMQTLNVGAGRTDNEYKAAEEQRRADLRADSQSDANFFFWAAGLAAISSGLLPVRLNILLNIGVFDLLDQVWPVTFILSWCTAW
Ga0207685_1058891433300025905Corn, Switchgrass And Miscanthus RhizosphereMQTLNVGAGRTDEEYKAAEEQRRAELRSDVQTYAMYFFIAAGLAGLGTGLLPMRLFGLVNIGAID
Ga0207705_1060981823300025909Corn RhizosphereMQTLNVGAGRTENEYKAAEEQRRADLRASSREDANYFFWAAGFAALSSGLLPVR
Ga0207663_1075050813300025916Corn, Switchgrass And Miscanthus RhizosphereMQTLNVGAGRTDEEYKAAEEQRRAELRSDVQTYAMYFFVAAGLAGLGTGLLPLRLFG
Ga0207649_1016901813300025920Corn RhizosphereMQTLNVGAGRSDTEYKAAEEQRRADLRADSVNDANYFFWAAGLAALGTGLLPVRLNIFVTIGTIDLLAFYERPLG
Ga0207646_1009152133300025922Corn, Switchgrass And Miscanthus RhizosphereMQTLNVGAGRTDNEYKAAEAQRRADLRDDSRSDANYFFWAAGMAALGNGLLPVRLNILVNIGAFDLLPYGPPL
Ga0207646_1179992213300025922Corn, Switchgrass And Miscanthus RhizosphereMQTLNVGAGRTDNEYQAAEEQRRADLLADSRSDANYFFWAAGLAALGTGLLPVRLNILVSIGAI
Ga0207702_1093932123300026078Corn RhizosphereMRTLNIGTGQTDQEYKAADEQRRADLRADSRSDANYFFLAAGLAALGTGLLPVRLNILVSIG
Ga0209838_104114123300026214SoilMQTLNVGAGRTDKEYMADQDQRRADLRADSLNHANYFFGAAGLAALGTGLLPVRVNILVSIGAVDLLSL
Ga0209863_1017264223300026281Prmafrost SoilMQTLNVGAGRTDKEYMADQDQRRTDLRADSLNHANYFFGAAGLAALGTGLLPVRVNILVSIGAVDLLSLYGMPLGHL
Ga0209238_125514313300026301Grasslands SoilMQTLNVGAGRTDEEHKATEEQRRADLRSDCRDDANYFFWAAGLSALGTGLLPVRLNLLVSVGTVDLLTLYGRPLGPFYPLAGCGKSLNRDDSPPQG
Ga0209240_102660613300026304Grasslands SoilMCSLMQILNVAAGRTDNEYKAAEEQRRAGLRADSREDANYFFWAAGLAAISSGLLPVLRVNFLINIGAFDLLSAYG
Ga0209153_109970523300026312SoilMQTLNVGAGRTDEEHKATEEQRRADLRSDCRDDANYFFWAAGLSALGTGLLPVRLNLLVSIGTVDLLTLYGR
Ga0209802_107278423300026328SoilMQTLNVGAGRTEDEYKAAEEQRRADLRDESRSDANYFFLAAGLAALGTGLFPVR
Ga0209375_118409313300026329SoilMQTLNVGAGRTDEEHKATEEQRRADLRSDCRDDANYFFWAAGLSALGTGLLPVRLN
Ga0209803_105364013300026332SoilMQTLNVGAGRTDEEYKATEEQRRADLRSDCRDDANYFFWAAGLSALGTGLLPVRLN
Ga0209808_103399213300026523SoilMQTLNVGAGRTDEEYKETEEKRRADLRADSQSDANFFFWAAGLAVLGTGLLPIRLN
Ga0209807_104955913300026530SoilMQTLNVGAGRTDEEHKATEEQRRADLRSDCRDDANYFFWAAGLSALGTGLLPVRLNLLVS
Ga0209648_1053774713300026551Grasslands SoilMQTLNVGAGRTDDEYKAAEQQRRADLVAESQSDANFFFWAAGLAALGTGLLPLRLNILVSIGAIDLLRLHA
Ga0208725_102451913300027158Forest SoilMQTLNVGAGRTDKEYKEAEEQRRADLLADSRNDANYFFLAAGLAALGTGLLPVRLNIFVSIGVLDLLGL
Ga0209004_104679423300027376Forest SoilMHDIHPMQTLNVGAGRTDEEYKAAEESRRVELRNDVQTYAMYFFIAAGLAALGTGLLPIRLFAFVNIGCIDLLTF
Ga0209115_103651613300027567Forest SoilVQTLNVGAGRTDEDYKKAEQQRRDDLLADSRSDANYFFWAAGLAAIGTGILPVRLNIFVSIGVLDL
Ga0209221_111655123300027609Forest SoilMQTLNVGAGRTDEEYKKAEEQRRADLLADSQSDANYFFVAAALVALGTRLLPVRLNFLVNIGAFDLLGYYGRGFWNPILSQGMAWRALGCWL
Ga0208988_111267123300027633Forest SoilMQTLNVGAGQTDQEYKAIEEQRRADLHAESQSDANYFFWAAGLAALGTGLLPVRVNILVSIGVA
Ga0209007_106980213300027652Forest SoilMQTLRVGAGRTDKEYKEAQEQRRAALLADSRSDANYFFWAAGLSAVDQRIVSVRFNILVNVGAFDLLGFYGR
Ga0208991_106742733300027681Forest SoilMQTLNVGAGQTDQEYKAIEEQRRADLHAESQSDANYFFWAAGLGALGTGLLPVRLNILVSIGAVDLVSLY
Ga0209655_1014774513300027767Bog Forest SoilVQTLNVGAGRTDEEYKEAEEQRRADLVADSRTDANYFFLAAGLAALGTGLLPVRLN
Ga0209773_1012145313300027829Bog Forest SoilVQTLNVGAGRTDEEYKEAEEQRRADLVADSRTDANYFFLAAGLAALGTGLLPVRLNIFVSIGVLDLLGLYARS
Ga0209580_1014476113300027842Surface SoilMQTLNVGAGQTDQEYQAAEEQRRTDLSSESRTDANYFFVAAVLAALGTGLFAVRVSLFFSIGAIDLLAFNRGAFGQFPTLV
Ga0209274_1004434913300027853SoilMQTLNVGAGRTDKEYQEAEERRRADLLADSRNDANYFFLAAGLAALGTGLLPVRL
Ga0209579_1047514913300027869Surface SoilVQTLNVGAGQSDQEYKAAEQQRRADLIADSRSDANFFFWAAGLAALGTGLLPVRLNILVTIG
Ga0209624_1040005613300027895Forest SoilMQTLRVGAGRTDKEYKEAQEQRRAALLADSRSDANYFFWAAGLSAVDQRIVSVRFNI
Ga0209488_1085066113300027903Vadose Zone SoilMQTLNVGAGRTDEEYKATEEQRRADILSDSRSDANYFFWAAGLSALGTGLLPVRLNLLVSIGTIDLLTLYGRPL
Ga0302226_1004453043300028801PalsaMQTLNVGAGRTDEEYKAANEQRRANLLAESRSEANYFFWAAGLAAVASGLFPVKMNFIVSIGAFDL
Ga0308309_1025962223300028906SoilMQTLNVGAGRTDQEYKEAEEQRRADLVADSRGDANYFFWAAGLAAIGTGLLPVRLNILVSIGLFDLLRFYGRPLDPLFAVL
Ga0311333_1006315313300030114FenMQTLNVDAVRSDKEHQEAEERRRADLRADSQNDANFFFWAAGLAALATGLLPIRLNVLV
Ga0311372_1245312713300030520PalsaMQILNVGAGRTDNEYKAAEEQRRIGLRADSREDANYFFWAAGLAAISSGLLPGLRINFLINIGLFDLMNAY
Ga0265762_103891213300030760SoilMQTLNVGAGQTDEDYKKAEGQRRDDLLADSRSDANYFFWAAGLAAIGTGILPVRLNIFVSIGVLDLLGLYGRPFDPLYARV
Ga0170824_10628602213300031231Forest SoilMEILNVGAGQTNQEHEAAEEQRRAELLSDSKTAAIYFFVAAGLAALSTGLLPVRVNILINVGVVDLLSVYGGSLRRLLPL
Ga0310813_1056283033300031716SoilMQTLNDGAGLSNDEYKASEEQRRADLKTDVQTYAQYFFFAAGLVALGTGLLPVRIPILVSIGAIDLLQL
Ga0307469_1047992123300031720Hardwood Forest SoilMQTLKVGPGWTDNEYEAAEERRRANLFSDSRSDANYFFLAAGLAALGTGLLPVRLNIFCQHRCG
Ga0306922_1235482623300032001SoilMEILNVGAGQTNQEHAAAEEQRRADLIADSRNDANYFFVAAGLSALGTGLLPIRMNFLVSIGTVDILALYGGALGRL
Ga0307471_10275873923300032180Hardwood Forest SoilMQTLNVGAGRTDTEYKESEEQRRADLRAESQSAANFFFWAAGLAALGTGLLPVRLNFLVSIGAID
Ga0335082_1100759313300032782SoilMQTLNVGAGRTDNEYLAAEEKRRADLRADSQDDANYFFWAAGVVALGTPLLPIHLNVFVNIGAIDLL
Ga0335078_1094485113300032805SoilMQTLNVGAGQSDSDYKAAQEWHRAELRDDSKNDANYFFAAAGLAALGTGLLPIRLGFLVNIGAVDLLRIYGGKYGPFYPLVV
Ga0316624_1068078613300033486SoilMQTLNVGAGRTDEEYKAAEEQRRADLRSDVQTYAMYFFIAAGLAGLGTGLLPVRLFGIVNIGSI
Ga0370483_0047520_2_2323300034124Untreated Peat SoilMQTLNVGAGQTDVEYQEAEQHRRADLVAESKGDANFFFWAAGLAALGTGLLPLRVNILVSIGLVDLLRLYGGSLGAL

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Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
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