Metagenome / Metatranscriptome Family F075819

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F075819
Family Type	Metagenome / Metatranscriptome
Number of Sequences	118
Average Sequence Length	94 residues
Representative Sequence	MRVFPVFFAVAILIAIVGLSASATDTVVRCGQVSERTPGSFVLSSPGVDPLAVVIPSGVVIAPPDYTCVSVLPGRPAAKLVALLTPDMPGYVAAQ
Number of Associated Samples	106
Number of Associated Scaffolds	118

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	13.56 %
% of genes near scaffold ends (potentially truncated)	22.03 %
% of genes from short scaffolds (< 2000 bps)	81.36 %
Associated GOLD sequencing projects	95
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.50

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (93.220 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (16.102 % of family members)
Environment Ontology (ENVO)	Unclassified (32.203 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (49.153 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 14.63% β-sheet: 24.39% Coil/Unstructured: 60.98%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.50
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.50
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 118 Family Scaffolds
PF02811	PHP	50.85
PF01850	PIN	7.63
PF07733	DNA_pol3_alpha	6.78
PF13185	GAF_2	1.69
PF00486	Trans_reg_C	0.85
PF07730	HisKA_3	0.85
PF03379	CcmB	0.85
PF00154	RecA	0.85
PF13426	PAS_9	0.85
PF00355	Rieske	0.85

COG ID	Name	Functional Category	% Frequency in 118 Family Scaffolds
COG0587	DNA polymerase III, alpha subunit	Replication, recombination and repair [L]	6.78
COG2176	DNA polymerase III, alpha subunit (gram-positive type)	Replication, recombination and repair [L]	6.78
COG0468	RecA/RadA recombinase	Replication, recombination and repair [L]	0.85
COG2386	ABC-type transport system involved in cytochrome c biogenesis, permease component	Posttranslational modification, protein turnover, chaperones [O]	0.85
COG3850	Signal transduction histidine kinase NarQ, nitrate/nitrite-specific	Signal transduction mechanisms [T]	0.85
COG3851	Signal transduction histidine kinase UhpB, glucose-6-phosphate specific	Signal transduction mechanisms [T]	0.85
COG4564	Signal transduction histidine kinase	Signal transduction mechanisms [T]	0.85
COG4585	Signal transduction histidine kinase ComP	Signal transduction mechanisms [T]	0.85

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	93.22 %
Unclassified	root	N/A	6.78 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	93.22 %
Unclassified	root	N/A	6.78 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	93.22 %
Unclassified	root	N/A	6.78 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	79.66 %
Unclassified	root	N/A	6.78 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.85 %

Name	Rank	Taxonomy	Distribution
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	69.49 %
Unclassified	root	N/A	6.78 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1.69 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.85 %

Name	Rank	Taxonomy	Distribution
unclassified Chloroflexi	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi	69.49 %
Unclassified	root	N/A	6.78 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.85 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.85 %

Name	Rank	Taxonomy	Distribution
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	69.49 %
Unclassified	root	N/A	6.78 %
Streptomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales	0.85 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	0.85 %

Name	Rank	Taxonomy	Distribution
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	69.49 %
Unclassified	root	N/A	6.78 %
Streptomycetaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	0.85 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.85 %

Name	Rank	Taxonomy	Distribution
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	69.49 %
Unclassified	root	N/A	6.78 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	0.85 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.85 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000033\|ICChiseqgaiiDRAFT_c2393238	All Organisms → cellular organisms → Bacteria	1262	Open in IMG/M
3300000363\|ICChiseqgaiiFebDRAFT_14522420	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	583	Open in IMG/M
3300000956\|JGI10216J12902_117245721	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	818	Open in IMG/M
3300004157\|Ga0062590_102777574	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	523	Open in IMG/M
3300004463\|Ga0063356_103264372	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	699	Open in IMG/M
3300004479\|Ga0062595_101139763	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	686	Open in IMG/M
3300004480\|Ga0062592_102496483	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	520	Open in IMG/M
3300005093\|Ga0062594_101656807	All Organisms → cellular organisms → Bacteria	666	Open in IMG/M
3300005293\|Ga0065715_10102539	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	3103	Open in IMG/M
3300005295\|Ga0065707_10051675	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	734	Open in IMG/M
3300005295\|Ga0065707_11113635	Not Available	512	Open in IMG/M
3300005438\|Ga0070701_10075118	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1816	Open in IMG/M
3300005445\|Ga0070708_100195070	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1894	Open in IMG/M
3300005467\|Ga0070706_100000638	All Organisms → cellular organisms → Bacteria	40180	Open in IMG/M
3300005530\|Ga0070679_100661062	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	988	Open in IMG/M
3300005544\|Ga0070686_100786642	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	766	Open in IMG/M
3300005546\|Ga0070696_101937927	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	511	Open in IMG/M
3300005549\|Ga0070704_100337749	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1267	Open in IMG/M
3300005719\|Ga0068861_102275424	Not Available	544	Open in IMG/M
3300005844\|Ga0068862_101565134	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	666	Open in IMG/M
3300005844\|Ga0068862_101923462	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	602	Open in IMG/M
3300006844\|Ga0075428_100538752	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1248	Open in IMG/M
3300006852\|Ga0075433_10606705	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	961	Open in IMG/M
3300006876\|Ga0079217_10065296	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1518	Open in IMG/M
3300006881\|Ga0068865_101104421	Not Available	699	Open in IMG/M
3300006894\|Ga0079215_10108503	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	1240	Open in IMG/M
3300006894\|Ga0079215_10558272	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	733	Open in IMG/M
3300006918\|Ga0079216_10320475	All Organisms → cellular organisms → Bacteria	929	Open in IMG/M
3300006918\|Ga0079216_10805415	All Organisms → cellular organisms → Bacteria → Terrabacteria group	691	Open in IMG/M
3300007004\|Ga0079218_10166278	All Organisms → cellular organisms → Bacteria	1634	Open in IMG/M
3300007255\|Ga0099791_10216939	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	904	Open in IMG/M
3300009089\|Ga0099828_10852636	All Organisms → cellular organisms → Bacteria → Terrabacteria group	815	Open in IMG/M
3300009090\|Ga0099827_10336632	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1282	Open in IMG/M
3300009094\|Ga0111539_11837838	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	702	Open in IMG/M
3300009100\|Ga0075418_10166668	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	2345	Open in IMG/M
3300009147\|Ga0114129_11037253	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1030	Open in IMG/M
3300009148\|Ga0105243_10135321	All Organisms → cellular organisms → Bacteria	2096	Open in IMG/M
3300009162\|Ga0075423_12962626	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	520	Open in IMG/M
3300010399\|Ga0134127_11258358	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	808	Open in IMG/M
3300010400\|Ga0134122_10101068	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	2284	Open in IMG/M
3300010403\|Ga0134123_12970285	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	543	Open in IMG/M
3300012096\|Ga0137389_10092424	All Organisms → cellular organisms → Bacteria	2387	Open in IMG/M
3300012203\|Ga0137399_10733708	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	832	Open in IMG/M
3300012204\|Ga0137374_10026718	All Organisms → cellular organisms → Bacteria	6411	Open in IMG/M
3300012204\|Ga0137374_10137173	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	2214	Open in IMG/M
3300012208\|Ga0137376_10128965	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	2164	Open in IMG/M
3300012353\|Ga0137367_10275201	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1208	Open in IMG/M
3300012358\|Ga0137368_10106264	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	2165	Open in IMG/M
3300012363\|Ga0137390_10472997	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1228	Open in IMG/M
3300012685\|Ga0137397_10078469	All Organisms → cellular organisms → Bacteria	2399	Open in IMG/M
3300012685\|Ga0137397_10484704	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	921	Open in IMG/M
3300012912\|Ga0157306_10336194	Not Available	568	Open in IMG/M
3300012918\|Ga0137396_10490774	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	910	Open in IMG/M
3300012922\|Ga0137394_10360201	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1241	Open in IMG/M
3300012925\|Ga0137419_10646580	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	853	Open in IMG/M
3300012925\|Ga0137419_11281838	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	615	Open in IMG/M
3300012927\|Ga0137416_10542533	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1006	Open in IMG/M
3300014326\|Ga0157380_10666900	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1040	Open in IMG/M
3300015254\|Ga0180089_1108152	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	578	Open in IMG/M
3300018027\|Ga0184605_10279003	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	758	Open in IMG/M
3300018027\|Ga0184605_10492153	Not Available	535	Open in IMG/M
3300018028\|Ga0184608_10029089	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	2069	Open in IMG/M
3300018028\|Ga0184608_10325296	Not Available	675	Open in IMG/M
3300018031\|Ga0184634_10037948	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1942	Open in IMG/M
3300018054\|Ga0184621_10253629	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	626	Open in IMG/M
3300018056\|Ga0184623_10031731	All Organisms → cellular organisms → Bacteria	2381	Open in IMG/M
3300018061\|Ga0184619_10095961	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1329	Open in IMG/M
3300018066\|Ga0184617_1210673	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	580	Open in IMG/M
3300018071\|Ga0184618_10328137	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	653	Open in IMG/M
3300018076\|Ga0184609_10146060	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1087	Open in IMG/M
3300018078\|Ga0184612_10455158	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	635	Open in IMG/M
3300019255\|Ga0184643_1024805	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	619	Open in IMG/M
3300020003\|Ga0193739_1034970	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1304	Open in IMG/M
3300021080\|Ga0210382_10031235	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	2002	Open in IMG/M
3300021080\|Ga0210382_10181078	All Organisms → cellular organisms → Bacteria → Terrabacteria group	911	Open in IMG/M
3300022694\|Ga0222623_10131894	All Organisms → cellular organisms → Bacteria → Terrabacteria group	974	Open in IMG/M
3300022756\|Ga0222622_10418933	Not Available	946	Open in IMG/M
3300025167\|Ga0209642_10064328	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	2118	Open in IMG/M
3300025885\|Ga0207653_10000178	All Organisms → cellular organisms → Bacteria	44636	Open in IMG/M
3300025908\|Ga0207643_10190846	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1244	Open in IMG/M
3300025910\|Ga0207684_10000024	All Organisms → cellular organisms → Bacteria	322180	Open in IMG/M
3300025912\|Ga0207707_10483811	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1057	Open in IMG/M
3300025917\|Ga0207660_10873148	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	734	Open in IMG/M
3300025930\|Ga0207701_10532672	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1003	Open in IMG/M
3300025938\|Ga0207704_11738084	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	536	Open in IMG/M
3300026089\|Ga0207648_10502689	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1109	Open in IMG/M
3300026116\|Ga0207674_10013033	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	9261	Open in IMG/M
3300026118\|Ga0207675_100065739	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	3389	Open in IMG/M
3300026944\|Ga0207570_1014305	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	603	Open in IMG/M
3300027181\|Ga0208997_1008778	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1321	Open in IMG/M
3300027462\|Ga0210000_1017025	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1100	Open in IMG/M
3300027543\|Ga0209999_1017837	All Organisms → cellular organisms → Bacteria	1296	Open in IMG/M
3300027637\|Ga0209818_1058844	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	947	Open in IMG/M
3300027639\|Ga0209387_1003733	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	2611	Open in IMG/M
3300027639\|Ga0209387_1074611	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	791	Open in IMG/M
3300027682\|Ga0209971_1094590	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	730	Open in IMG/M
3300027691\|Ga0209485_1347324	All Organisms → cellular organisms → Bacteria → Terrabacteria group	502	Open in IMG/M
3300027876\|Ga0209974_10334087	All Organisms → cellular organisms → Bacteria	585	Open in IMG/M
3300027880\|Ga0209481_10082431	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1535	Open in IMG/M
3300027886\|Ga0209486_10162206	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1240	Open in IMG/M
3300028380\|Ga0268265_12505339	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	522	Open in IMG/M
3300028536\|Ga0137415_10128004	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	2384	Open in IMG/M
3300028711\|Ga0307293_10239243	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	577	Open in IMG/M
3300028715\|Ga0307313_10024865	All Organisms → cellular organisms → Bacteria	1654	Open in IMG/M
3300028771\|Ga0307320_10153548	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	891	Open in IMG/M
3300028793\|Ga0307299_10269798	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	639	Open in IMG/M
3300028796\|Ga0307287_10059927	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1410	Open in IMG/M
3300028807\|Ga0307305_10159111	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1042	Open in IMG/M
3300028807\|Ga0307305_10306638	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	722	Open in IMG/M
3300028814\|Ga0307302_10115328	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1289	Open in IMG/M
3300028824\|Ga0307310_10479830	All Organisms → cellular organisms → Bacteria → Terrabacteria group	625	Open in IMG/M
3300028878\|Ga0307278_10068989	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1595	Open in IMG/M
3300028881\|Ga0307277_10004874	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	5155	Open in IMG/M
3300028885\|Ga0307304_10349960	Not Available	660	Open in IMG/M
3300031740\|Ga0307468_100498454	All Organisms → cellular organisms → Bacteria → Terrabacteria group	965	Open in IMG/M
3300031965\|Ga0326597_11534705	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	638	Open in IMG/M
3300033815\|Ga0364946_147140	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	544	Open in IMG/M
3300034178\|Ga0364934_0104484	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1066	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	78.81%
Host-Associated	Host-Associated	21.19%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	63.56%
Plants	Host-Associated → Plants	21.19%
Aquatic	Environmental → Aquatic	15.25%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	61.86%
Rhizoplane	Host-Associated → Plants → Rhizoplane	13.56%
Sediment	Environmental → Aquatic → Sediment	12.71%
Rhizosphere	Host-Associated → Plants → Rhizosphere	7.63%
Freshwater	Environmental → Aquatic → Freshwater	2.54%
Floodplain	Environmental → Terrestrial → Floodplain	1.69%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	50.85%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	12.71%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	12.71%
Loam	Environmental → Terrestrial → Soil → Loam	11.02%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	7.63%
Sediment	Environmental → Aquatic → Freshwater → Sediment	2.54%
Sediment	Environmental → Terrestrial → Floodplain → Sediment	1.69%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.85%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	33.05%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	13.56%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	12.71%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	12.71%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	9.32%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	7.63%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	3.39%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	2.54%
Unclassified	Environmental → Terrestrial → Floodplain → Sediment → Unclassified	1.69%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	0.85%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	0.85%
Unclassified	Environmental → Terrestrial → Soil → Loam → Unclassified	0.85%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.85%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	16.10%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	12.71%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	10.17%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	9.32%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	5.93%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	5.93%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	4.24%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	4.24%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	4.24%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	3.39%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	2.54%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	2.54%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	2.54%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	2.54%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	1.69%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere	1.69%
Sediment	Environmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment	1.69%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	0.85%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Corn, Switchgrass And Miscanthus Rhizosphere	0.85%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.85%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	0.85%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.85%
Soil	Environmental → Terrestrial → Soil → Loam → Unclassified → Soil	0.85%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Miscanthus Rhizosphere	0.85%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.85%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.85%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.85%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000033	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000363	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300004157	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300004480	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4	Environmental	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005293	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1	Host-Associated	Open in IMG/M
3300005295	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3	Environmental	Open in IMG/M
3300005438	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005530	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG	Environmental	Open in IMG/M
3300005544	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG	Environmental	Open in IMG/M
3300005546	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG	Environmental	Open in IMG/M
3300005549	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG	Environmental	Open in IMG/M
3300005719	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2	Host-Associated	Open in IMG/M
3300005844	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2	Host-Associated	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300006876	Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS200	Environmental	Open in IMG/M
3300006881	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2	Host-Associated	Open in IMG/M
3300006894	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Control	Environmental	Open in IMG/M
3300006918	Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS100	Environmental	Open in IMG/M
3300007004	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Compost	Environmental	Open in IMG/M
3300007255	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1	Environmental	Open in IMG/M
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009148	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG	Host-Associated	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300010403	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3	Environmental	Open in IMG/M
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012204	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_100_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012353	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_80_16 metaG	Environmental	Open in IMG/M
3300012358	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_100_16 metaG	Environmental	Open in IMG/M
3300012363	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaG	Environmental	Open in IMG/M
3300012685	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaG	Environmental	Open in IMG/M
3300012912	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S163-409C-2	Environmental	Open in IMG/M
3300012918	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaG	Environmental	Open in IMG/M
3300012922	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaG	Environmental	Open in IMG/M
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300014326	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG	Host-Associated	Open in IMG/M
3300015254	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT860_16_10D	Environmental	Open in IMG/M
3300018027	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_coex	Environmental	Open in IMG/M
3300018028	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_coex	Environmental	Open in IMG/M
3300018031	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_200_b1	Environmental	Open in IMG/M
3300018054	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_b1	Environmental	Open in IMG/M
3300018056	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_100_b1	Environmental	Open in IMG/M
3300018061	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_b1	Environmental	Open in IMG/M
3300018066	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_5_b1	Environmental	Open in IMG/M
3300018071	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_b1	Environmental	Open in IMG/M
3300018076	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_60_coex	Environmental	Open in IMG/M
3300018078	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_60_coex	Environmental	Open in IMG/M
3300019255	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300020003	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L2a2	Environmental	Open in IMG/M
3300021080	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_coex redo	Environmental	Open in IMG/M
3300022694	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_30_coex	Environmental	Open in IMG/M
3300022756	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1	Environmental	Open in IMG/M
3300025167	Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 19_2 (SPAdes)	Environmental	Open in IMG/M
3300025885	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025908	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025912	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025917	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025930	Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)	Environmental	Open in IMG/M
3300025938	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026089	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026116	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026118	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026944	Soil microbial communities from Kellog Biological Station, Michigan, USA - Nitrogen cycling UWRJ-G01K2-12 (SPAdes)	Environmental	Open in IMG/M
3300027181	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM2_M1 (SPAdes)	Environmental	Open in IMG/M
3300027462	Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant Co PM (SPAdes)	Host-Associated	Open in IMG/M
3300027543	Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M1 AM (SPAdes)	Host-Associated	Open in IMG/M
3300027637	Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS200 (SPAdes)	Environmental	Open in IMG/M
3300027639	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Control (SPAdes)	Environmental	Open in IMG/M
3300027682	Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S AM (SPAdes)	Host-Associated	Open in IMG/M
3300027691	Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS100 (SPAdes)	Environmental	Open in IMG/M
3300027876	Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S PM (SPAdes)	Host-Associated	Open in IMG/M
3300027880	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3 (SPAdes)	Host-Associated	Open in IMG/M
3300027886	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Compost (SPAdes)	Environmental	Open in IMG/M
3300028380	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028536	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300028711	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_150	Environmental	Open in IMG/M
3300028715	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_203	Environmental	Open in IMG/M
3300028771	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_369	Environmental	Open in IMG/M
3300028793	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_159	Environmental	Open in IMG/M
3300028796	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_141	Environmental	Open in IMG/M
3300028807	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_186	Environmental	Open in IMG/M
3300028814	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_183	Environmental	Open in IMG/M
3300028824	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_197	Environmental	Open in IMG/M
3300028878	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_117	Environmental	Open in IMG/M
3300028881	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_116	Environmental	Open in IMG/M
3300028885	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_185	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300031965	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT100D185	Environmental	Open in IMG/M
3300033815	Sediment microbial communities from East River floodplain, Colorado, United States - 31_s17	Environmental	Open in IMG/M
3300034178	Sediment microbial communities from East River floodplain, Colorado, United States - 27_j17	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
ICChiseqgaiiDRAFT_23932382	3300000033	Soil	MRLFPVFFAVAILVAIVGLSASATDTVVRCGQVSERTPASFVLSSPGVDPLRVAIPSGMVGAPTDYTCVSVLPGKPAKLVALITPDMPGYVAEN*
ICChiseqgaiiFebDRAFT_145224202	3300000363	Soil	VGRVFPLFFAVAILVAIVGLSASATDTVVRCGQVSERTPGSFVLSSPGVDPLTVAIPNGVVVAPPDYTCASVLPGRPAAKLVALLTPDMPGYVAAQ*
JGI10216J12902_1172457212	3300000956	Soil	MRVFPVFFAAAILLAIVGMSARASDTVVRCGQVSERTPASFVLSSPGVDPLRVAIPSGQVGAPADYTCVSVLPGTPAQLVGLVTPDMPGYVAEN*
Ga0062590_1027775741	3300004157	Soil	MTVMRVFPLFFAVAILIAIVGLSASATDTVVRCGQVSERTPGSFVLSSPGVDPLTVVIPNGVVVAPPDYTCASVLPGRPAAKLVALLTPDMPGYVAAQ*
Ga0063356_1032643722	3300004463	Arabidopsis Thaliana Rhizosphere	MRFFPVFFAAAILVAIVGLSASATDTVVRCGHVSERTPASFVLSSPGVDPLRVVIPSGMMSAPPDYTCVSVLPGKPAKLVALLTPDMPGYVAEN*
Ga0062595_1011397631	3300004479	Soil	MRLFPVFFAVAILVAIVGLSASATDTVVRCGQVSERTPGSFVLSSPGVDPLAVVIPNGVVVAPPEYTCASVLPGRPAAKLVALLTPDMPGYVAEQ*
Ga0062592_1024964832	3300004480	Soil	MRLFPVFFAVAILVAIVGLSASATDTVVRCGQVSERTPGSFVLSSPGVDPLAVVIPNGVVVAPPEYTCASVLPGRPAAKLVALLTPDMPGYVA
Ga0062594_1016568072	3300005093	Soil	VGRVFPLFFAVAILVAIVGLSASATDTVVRCGQVSERTPGSFVLSSPGADPLAVVIPTGVVVAPPDYTCASVLPGRPAAKLVTLLTPDMPGYVAEH*
Ga0065715_101025392	3300005293	Miscanthus Rhizosphere	MTVMRVFPLFFAVAILIAIVGLSASATDTVVRCGQVSERTPGSFVLSSPGVDPLAVVIPNGVVVAPPDYTCASVLPGRPAAKLVALLTPDMPGYVAAQ*
Ga0065707_100516752	3300005295	Switchgrass Rhizosphere	MRLFPVFFAVAILIAIVGLSASATDTVVRCGQVSERTPGSFVLSSPGVDPLAVVIPNGVVVAPPDYTCASVLPGRPAAKLVALLTPDMPGYVAAQ*
Ga0065707_111136351	3300005295	Switchgrass Rhizosphere	MRLFPVFFAVAILVAIVGLSASATDTVVRCGQVSERTPGSFVLSSPGVDPLAVVIPNGVVVAPPDYTCASVLPGRPAAKLVALLTPDMPGYVAAQ*
Ga0070701_100751181	3300005438	Corn, Switchgrass And Miscanthus Rhizosphere	MTVMRVFPLFFAVAILIAIVGLSASATDTVVRCGQVSERTPGSFVLSSPGVDPLAVVIPNGVVVAPPDYTCASVLPGRPAAKLVALL
Ga0070708_1001950702	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MRLFPVFFAVAILVAIVGLSASATDTVVRCGQVSEQTPASFVLSSPGVDPLRVAIPSGKEIAAADYVCVSVLPGAPAAQLVAIVTPEMPGYVAEH*
Ga0070706_10000063839	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	MRLFPVFFAVAILVAIVGLSASATDTVVRCGQVSEQTPASFVLSSPGVDPLRVAIPSGKEIAAADYVCVSVLPGTPAAQLVAIVTPEMPGYVAEH*
Ga0070679_1006610622	3300005530	Corn Rhizosphere	RTTVGRVFPLFFAVAILVAIVGLSASATDTVVRCGQVSERTPGSFVLSSPGVDPLTVVIPNGVVVAPPDYTCASVLPGRPAAKLVALLTPDMPGYVAAQ*
Ga0070686_1007866421	3300005544	Switchgrass Rhizosphere	MTVLRVFPLFFAVAILIAIVGLSASATDTVVRCGQVSERTPGSFVLSSPGVDPLTVVIPNGVVVAPPDYTCASVLPGRPAAKLVALLTPDMPGYVA
Ga0070696_1019379271	3300005546	Corn, Switchgrass And Miscanthus Rhizosphere	MRIFPVFFAVAILVAIVGLSASATDTVVRCGQVTERTPASFVLSSPGVDPLRVVIPSGMVSAPPDYTCVSVLPGRPAAQLVALLTPDMPGYIAEN*
Ga0070704_1003377491	3300005549	Corn, Switchgrass And Miscanthus Rhizosphere	VAILVAIVGLSASATDTVVRCGHVTERTPASFVLSSPGVDPLRVVIPSGMVSAPPDYTCVSVLPGRPAAQLVALLTPDMPGYIAEN*
Ga0068861_1022754242	3300005719	Switchgrass Rhizosphere	MRLFPVFFAVAILVAIVGLSASATDTVVRCGQVSERTPGSFVLSSPGVDPLAVAIPNGVVVAPPDYTCASVLPGRPAAKLVALLTPDMPGYVAAQ*
Ga0068862_1015651342	3300005844	Switchgrass Rhizosphere	MTVMRVFPLFFAVAILIAIVGLSASATDTVVRCGQVSERTPGSFVLSSPGVDPLAVVIPNGVVVAPPDYTCASVLPGRPAAKLVALLTPDMPGYVAEH*
Ga0068862_1019234622	3300005844	Switchgrass Rhizosphere	MRLFPVFFAVAILVAIVGLSASATDTVVRCGQVSERTPGSFVLSSPGVDPLAVVIPNGVVVAPPEYTCASVLPGRPAAKLVALLT
Ga0075428_1005387522	3300006844	Populus Rhizosphere	MRVFPVFFAVAILVAIVGLSASATDTVVRCGQVSERTPASFVLSSRGVDPLRIAIPSGMVGAPPDYTCVSVLPGKPAKLVAVLTPDMPGYVAEN*
Ga0075433_106067053	3300006852	Populus Rhizosphere	MTVMRVFPLFFAVAILIAIVGLSASATDTVVRCGRVSERTPGSFVLSSPGVDPLAVVIPNGVVVAPPDYTCASVLPGRPAAKLVALLTPDMPGYVAQP*
Ga0079217_100652962	3300006876	Agricultural Soil	MRVFPVFFAAAILVAVVGLSAGATDTVVRCGHVSERTPASFVLSSPSVDPLRVVIPSGMVTAPADYTCVSVLPGIPAAKLVGLLTPDMPGYIAKN*
Ga0068865_1011044212	3300006881	Miscanthus Rhizosphere	MTVLRVFPLFFAVAILIAIVGLSASATDTVVRCGQVSERTPGSFVLSSPGVDPLTVVIPNGVVVAPPDYTCASVLPGRPAAKLVALLTPDMPGYVAAQ*
Ga0079215_101085032	3300006894	Agricultural Soil	MRVFPVFFAVAILVAVVGLSAGATDTVVRCGHVSERTPASFVLSSPSVDPLRVVIPSGMVSAPPDYTCVSVLPGRPAAQLVALLTPDMPGYVAQN*
Ga0079215_105582722	3300006894	Agricultural Soil	MTGMRVFPVFFAAAILIAIVGLSASATDTVVRCGHVSERTPASFVLSSPGVDPLRVVIPSGMVSTPPDYTCVSVLPGRPAAQLVALLTP
Ga0079216_103204752	3300006918	Agricultural Soil	MRVFPVFFAAAILVAVVGLSAGATDTVVRCGHVSERTPASFVLSSPSVDPLRVVIPTGMVTAPTDYTCVSVLPGIPAAKLVGLLTPDMPGYIAKN*
Ga0079216_108054153	3300006918	Agricultural Soil	CASHVTVMRVFPVFFAVAILVAVVGLSAGATDTVVRCGHVSERTPASFVLSSPSVDPLRVVIPTGMVSALPDYTCVSVLPGLPAAQLVALLTPDMPGYVAEN*
Ga0079218_101662782	3300007004	Agricultural Soil	MTVMRVFPVFFAVAILVAVVGLSAGATDTVVRCGHVSERTPASFVLSSPSVDPLRVVIPTGMVSALPDYTCVSVLPGLPAAQLVALLTPDMPGYVAEN*
Ga0099791_102169392	3300007255	Vadose Zone Soil	MRLFPVFFAVAILVAIVGLSASATDTVVRCGQVSEQTPASFVLSSPGVDPLRVAIPSGKEIAAAGYMCVSVLPGTPAAQLVAIVTPDMPGYVAAH*
Ga0099828_108526363	3300009089	Vadose Zone Soil	MRLFPVFFAVAILVAIVGLRASATDTVVRCGQVIEQTPASFVLSSPGVDPLRVAIPSGKEIAAADHVCVSVLPGTPAARLVAIVTPDMPGYVAAH*
Ga0099827_103366323	3300009090	Vadose Zone Soil	VFFAAAILIAIVGLSASATDTVIRCGQVSERTSASFVLSSPGVDPLRVTIPSGRDIAPADYACVSVLPGTPAAKLVGLVTPDMPGYVAAH*
Ga0111539_118378382	3300009094	Populus Rhizosphere	MTVMRVFPLFFAVAILIAIVGLSASATDTVVRCGQVSERTPGSFVLSSPGVDPLAVVIPNGVVVAPPDYTCASVLPGRPAAKLVALLTPDMPGYVAAH*
Ga0075418_101666682	3300009100	Populus Rhizosphere	MRVFPVFFAVAILVAIVGLSASATDTVVRCGQVRERTPASFVLSSRGVDPLRIAIPSGMVGAPPDYTCVSVLPGKPAKLVAVLTPDMPGYVAEN*
Ga0114129_110372532	3300009147	Populus Rhizosphere	MTVMRVFPLFFAVAILIAIVGLSASATDTVVRCGQVSERTPGSFVLSSPGVDPLTVVIPNGVVVAPPDYTCASVLPGRPAAKLVALLTPDMPGYVAQP*
Ga0105243_101353212	3300009148	Miscanthus Rhizosphere	MTVMRVFPLFFAVAILIAIVGLSASATDTVVRCGQVSERTPGSFVLSSPGVDPLAVVIPNGVVVAPPDYTCASVLPGRPAAKLVALLTPDMPGYVAEQ*
Ga0075423_129626261	3300009162	Populus Rhizosphere	MTVLRVFPLFFAVAILIAIVGLSASATDTVVRCGQVSERTPGSFVLSSPGVDPLAVVIPNGVVVAPPDYTCASVLPGRPAAKLVALLTPDMPGYVAAH*
Ga0134127_112583582	3300010399	Terrestrial Soil	MAVGRVFPLFFGVAILIAVVGLSAGATDTVVRCGQVSERTPGSFVLSSPGVDPLAVVIPNGVVVAPPDYTCASVLPGRP
Ga0134122_101010682	3300010400	Terrestrial Soil	MAVGRVFPLFFGVAILIAVVGLSAGATDTVVRCGQVSERTPGSFVLSSPGVDPLAVVIPNGVVVAPPDYTCASVLPGRPAAKLVALLTPDMPGYVAAQ*
Ga0134123_129702852	3300010403	Terrestrial Soil	MAVGRVFPLFFGVAILIAVVGLSAGATDTVVRCGQVSERTPGSFVLSSPGVDPLAVVIPNGVVVAPPDYTCASVLPGRPAAKLVALLTPDMPGYV
Ga0137389_100924242	3300012096	Vadose Zone Soil	MRMRLFPVFFAVAILVAIVGLSASATDTVVRCGQVSEQTPASFVLSSPGVDPLRVAIPSGKEIAAADYTCVSVLPGTPAAQLVGVLTPDMPGYVAEH*
Ga0137399_107337082	3300012203	Vadose Zone Soil	MRVFPVFFAAAILLAVVGLSASATDTVVRCGQVSERTPASFVLSSSGVDPLRVVIPSGKVSAPANYACVSVLPGTPAAQLVGLLTPDMPGYVAQP*
Ga0137374_100267182	3300012204	Vadose Zone Soil	MRLFPVLFAIAILAAIVGISANATDTVVRCGQVSERTPGSFVLSSPGVDPLRVAIPSGVVIAPPDYTCVSVLPGRPAAKLVGLLTPDMPGYIAQP*
Ga0137374_101371732	3300012204	Vadose Zone Soil	MRLFPIFFAVAILVVIVGLSATATDRVVRCGRVSERAPATFVLSSPGVDPLRVAIPSGMVVAPPDYTCVSVLPGRPAAQLVAVLTPDMPGYIAEQ*
Ga0137376_101289652	3300012208	Vadose Zone Soil	MTVMRVFPLFFAVAILIAIVGFSASATDTVVRCGHVSERTPASFVLSSPGVDPLRVAIPSGVVAAPPDYTCVSVLPGRPAAQLVALLTPDMPGYVAEQ*
Ga0137367_102752011	3300012353	Vadose Zone Soil	FAVAILVVIVGLSATATDRVVRCGRVSERAPATFVLSSPGVDPLRVAIPSGMVVAPPDYTCVSVLPGRPAAQLVAVLTPDMPGYIAEQ*
Ga0137368_101062641	3300012358	Vadose Zone Soil	MRLFPIFFAVAILVVIVGLSATATDRVVRCGRVSERAPATFVLSSPGVDPLRVAIPSGMVVAPPDYTCVSVLPGRPAAQLVAVL
Ga0137390_104729972	3300012363	Vadose Zone Soil	MRVFPLFFAAAILLAIVGLSASATDTVVRCGQVSERTPTSFVLTSSGVDPLHVVIPSGKVTAADDYTCVSVLPGTPAAQLVGVLTPDMPGYVAEH*
Ga0137397_100784692	3300012685	Vadose Zone Soil	MTEMRVFPVFFAVAILIAIVGLSASATDTVVRCGHVSERTPASFVLSATGVDPLHVAIPSGVVVAPPDYACVSVLPGRPAAQLVGVLTPDMPGYIAEQQ*
Ga0137397_104847042	3300012685	Vadose Zone Soil	MRVFPVFFAVAILLAVVGLSASATDTVVRCGQVSERTPGSFVVSSPGVDPLRVVIPSGKVSAPADYVCVSVLPATPAAQLVGVLTPDMPGYVAQP*
Ga0157306_103361941	3300012912	Soil	MRLFPVFFAVAILVAIVGLSASATDTVVRCGQVSERTPGSFVLSSPGVDPLAVVIPNGVVVAPPEYTCASVLPGRPAAKLVALLTPDMPGYVAEN*
Ga0137396_104907742	3300012918	Vadose Zone Soil	MRVFPLFFAAAILLAVVGLSASATDTVVRCGLVSERTPASFVLSSSGVDPLRVVIPSGKVSAPADYACVSVLPGTPAAQLVCLLPPDMPGYVAQP*
Ga0137394_103602012	3300012922	Vadose Zone Soil	MRVFPVFFAVAILLAIVGLSASATDTVVRCGQVSERTPGSFVVSSPGVDPLRVVIPSGKVSAPADYACVSVLPATPAAQLVGVLTPDMPGYVAQP*
Ga0137419_106465801	3300012925	Vadose Zone Soil	MFFAVAILLAIVGLSASATDTVVRCGLVRERTPASFVLLSPGIDSLRVAIPSGRDFAPADYACVSVLPGTPAAQLVGLLTPDMPGYVAAH*
Ga0137419_112818381	3300012925	Vadose Zone Soil	MRVFPVFFAAAILLAIVGLSASARDTVVRCGLVSERTPASFVLSSSGVDPLRVVIPSGKVSAPADYACVSVLPGTPAAQLVGLLTPDMPGYVAQP*
Ga0137416_105425332	3300012927	Vadose Zone Soil	MRLFPVFFAAAILIAIVGLSASATDTVIRCGQVSERTPASFVLSSPGVDPLRVAIPTGRDIVPADYACVSVLPGTPAAQLVGLLTPDMPGYVAAH*
Ga0157380_106669002	3300014326	Switchgrass Rhizosphere	MTVLRVIPLFFAVAILIAIVGLSASATDTVVRCGQVSERTPGSFVLSSPGVDPLTVVIPNGVVVAPPDYTCASVLPGRPAAKLVTLLTPDMPGYVAEH*
Ga0180089_11081522	3300015254	Soil	MRVFPVFFAVAILVAIVGLSASATDTVVRCGRVSERTPASFVLSSPGVDPLRVVIPSGMVGAPLDYTCASVLPGRPAAQLVALLTPDMPGYVAEN*
Ga0184605_102790032	3300018027	Groundwater Sediment	MRVFPLFFAVAILVAIVGLSASATDTVVRCGQVSERTPGSFVLSSPGVDPLWVVIPSGVVIAPPDYTCVSVLPGRPAAK
Ga0184605_104921531	3300018027	Groundwater Sediment	PGTSCAPYVGMRLFPVFFAVAILLAVVGLSASATDTVVRCGQVSERTPASFVLSSSGVDPLRVVIPSGKVSAPADYACVSVLPGTPAAQLVGLLTPDMPGYVAQP
Ga0184608_100290893	3300018028	Groundwater Sediment	MTVMRVFPLFFAVAILVAIVGLSASATDTVVRCGQVSERTPGSFVLSSPGVDPLAVVIPSGVVVAPPDYTCVSVLPGRPAAQLVALLTPDMPGYVAEQ
Ga0184608_103252961	3300018028	Groundwater Sediment	AVAILVAIVGLSASATDTVVRCGQVSERTPASFVLSSPGVDPLRVAIPSGRDVAPADYACVSVLPGTPAAQLVGLLTPDMPGYVAEQP
Ga0184634_100379482	3300018031	Groundwater Sediment	MRFFPVFFAVAILVAIVGLSASATDTVVRCGRVSERTPASFVLSSPGVDPLPVVIPSGMVIAPPDYTCVSVLPGRPAAQLVALLTPDMPGYVAEN
Ga0184621_102536291	3300018054	Groundwater Sediment	MTVMRVFPLFFAVAILVAIVGLSASATDTVIRCGQVSERTPGSFVLSSPGVDPLAVVIPNGVVIAPPDYTCVSVLPGRPAAQLVALLTPDMPGYVAAQ
Ga0184623_100317312	3300018056	Groundwater Sediment	MRVFPVFFAAAILVAIVGLSAGATDTVVRCGHVSERTPASFVLSSPGVDPLRVVIPSGMVSAPPDYTCVSVLPGRPAAQLVALLTPDMPGYVAEN
Ga0184619_100959612	3300018061	Groundwater Sediment	MRVFPLFFAVAILVAIVGLSASATDTVVRCGQVSERTPGSFVLSSPGVDPLWVVIPSGVVIAPPDYTCVSVLPGRPAAKLVSLLTPDMPGYIAEQ
Ga0184617_12106731	3300018066	Groundwater Sediment	MRVFPVFFAVAILIAIVGLSASATDTVVRCGQVSERTPGSFVLLSPGVDPLAVVIPNGVLVAPPDYTCASVLPGRPAAKLVALLTPDMPGYVAEQ
Ga0184618_103281371	3300018071	Groundwater Sediment	MRFFPFFFAVAILVAIVGLSASATDTVVRCGQVSERTPASFVLSARGVDPLRIVIPSGMVSAPSDYTCVSVLPGRPAAQLVALLTPDMPGYIAEN
Ga0184609_101460602	3300018076	Groundwater Sediment	MRLFPIFFAVAILVAIVGLSASATDTVVRCGHVSERTPGSFVLSSPGVDPLAVVIPNGVVVAPPDYTCASVLPGRPAAKLVALLTPDMPGYVAEQ
Ga0184612_104551581	3300018078	Groundwater Sediment	MRFFPVFFAVAILVAIVGLSAGATDTVVRCGRVSERTPASFVLSSPGVDPLRVVIPSGMVGAPIDYTCVSVLPGRPAAQLVALLTPDMPGYVAEN
Ga0184643_10248051	3300019255	Groundwater Sediment	MRLFPVFFAVAILIAIVGLSASATDTVVRCGQVSERTPGSFVLSSPGVDPLAVVIPSGVVIAPPDYTCVSVLPGRPAAK
Ga0193739_10349702	3300020003	Soil	MRLFPVFFAAAILVAIVGLSASATDTVVRCGHVSERTPASFVLSSPGVDPLRVVIPSGMVGAPPDYTCVAVLPGRPAAQLVALLTPDMPGYVAEN
Ga0210382_100312352	3300021080	Groundwater Sediment	MRLFPVFFAVAILIAIVGLSASATDTVVRCGQVSERTPGSFVLSSPGVDPLAVVIPSGVVIAPPDYTCVSVLPGRPAAKLVALLTPDMPGYVAEQ
Ga0210382_101810782	3300021080	Groundwater Sediment	MTVMRVFPLFFAVAILVAIVGLSASATDTVVRCGQVSERTPGSFVLSSPGVDPLAVVIPNGVVVAPPDYTCASVLPGRPAAKLVALLTPDMPGYVAAQ
Ga0222623_101318942	3300022694	Groundwater Sediment	MAVGRAFPLFFAVAILVAIVGLSASATDTVVRCGQVSERTPGSFVLSSPGVDPLAVVIPSGVVIAPPDYTCASVLPGRPAAKLVALLTPDMPGYVAAQ
Ga0222622_104189332	3300022756	Groundwater Sediment	IVGLSASATDTVVRCGQVSERTPGSFVLSSPGVDPLAVVIPNGVLVAPPDYTCASVLPGRPAAKLVALLTPDMPGYVAAQ
Ga0209642_100643282	3300025167	Soil	MTVMRVFPVFFAAAILVAIVGLSANATDTVVRCGQVSERTPASFVLSSSGVDPLRVVIPSGMVSAPADYTCVSVLPGRPAAQLVALLTPDMPGYIAEN
Ga0207653_100001789	3300025885	Corn, Switchgrass And Miscanthus Rhizosphere	MTVMRVFPLFFAVAILIAIVGLSASATDTVVRCGQVSERTPGSFVLSSPGVDPLAVVIPNGVVVAPPDYTCASVLPGRPAAKLVALLTPDMPGYVAAQ
Ga0207643_101908463	3300025908	Miscanthus Rhizosphere	VGRVFPLFFAVAILVAIVGLSASATDTVVRCGQVSERTPGSFVLSSPGADPLAVVIPTGVVVAPPDYTCASVLPGRPAAKLVTLLTPDMPGYVAEH
Ga0207684_1000002478	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MRLFPVFFAVAILVAIVGLSASATDTVVRCGQVSEQTPASFVLSSPGVDPLRVAIPSGKEIAAADYVCVSVLPGTPAAQLVAIVTPEMPGYVAEH
Ga0207707_104838113	3300025912	Corn Rhizosphere	TTVGRVFPLFFAVAILVAIVGLSASATDTVVRCGQVSERTPASFVLSSPGADPLAVVIPTGVVVAPPDYTCASVLPGRPAAKLVTLLTPDMPGYVAEH
Ga0207660_108731482	3300025917	Corn Rhizosphere	MRLFPVFFAVAILVAIVGLSASATDTVVRCGQVSERTPGSFVLSSPGVDPLAVVIPNGVVVAPPDYTCASVLPGRPAAKLVALLTPDMPGYVAAQ
Ga0207701_105326722	3300025930	Corn, Switchgrass And Miscanthus Rhizosphere	MTVLRVFPLFFAVAILIAIVGLSASATDTVVRCGQVSERTPGSFVLSSPGVDPLAVVIPNGVVVAPPDYTCASVLPGRPAAKLVTLLTPDMPGYVAEH
Ga0207704_117380841	3300025938	Miscanthus Rhizosphere	VGRVFPLFFAVAILVAIVGLSASATDTVVRCGQVSERTPGSFVLSSPGVDPLTVVIPNGVVVAPPDYTCASVLPGRPAAKLVALLTPDMPGYVAAQ
Ga0207648_105026892	3300026089	Miscanthus Rhizosphere	MTVMRVFPLFFAVAILIAIVGLSASATDTVVRCGQVSERTPDSFVLSSPGVDPLAVVIPNGVVVAPPDYTCASVLPGRPAAKLVALLTPDMPGYVAAQ
Ga0207674_100130337	3300026116	Corn Rhizosphere	MTVMRVFPLFFAVAILIAIVGLSASATDTVVRCGQVSERTPGSFVLSSPGVDPLAVVIPNGVVVAPPDYTCASVLPGRPAAKLVALLTPDMPGYVAAH
Ga0207675_1000657396	3300026118	Switchgrass Rhizosphere	MRLFPVFFAVAILVAIVGLSASATDTVVRCGQVSERTPGSFVLSSPGVDPLAVAIPNGVVVAPPDYTCASVLPGRPAAKLVALLTPDMPGYVAAQ
Ga0207570_10143052	3300026944	Soil	MTVMRVFPLFFAVAILVAIVGLSASATDTVVRCGQVSERTPGSFVLSSPGVDPLAVVIPNGVVVAPPDYTCASVLPGRPAAKLVALLTPDMPGYVAEQ
Ga0208997_10087782	3300027181	Forest Soil	MRLFPVFFAAAILVAIVGLSASATDTVVRCGQVSERTAASFVLSSPGVDPLRVAIPSGRDVALADYACVSVLPGRPAAQLVGLLTPDMPGYVAAH
Ga0210000_10170252	3300027462	Arabidopsis Thaliana Rhizosphere	MRIFPVFFAVAILVAIVGFSASATDTVVRCGHVTERTPASFVLSSPGVDPLQVAIPSGMIGAPADYTCVSVLPGKPAKLVALITPDMPGYVAEN
Ga0209999_10178372	3300027543	Arabidopsis Thaliana Rhizosphere	MRIFPVFFAVAILVAIVGLSASATDTVVRCGHVTERTPASFVLTSPGVDPLRVAIPSGMIGAPADYTCVSVLPGKPAKLVALITPDMPGYVAEN
Ga0209818_10588441	3300027637	Agricultural Soil	MRVFPVFFAAAILVAVVGLSAGATDTVVRCGHVSERTPASFVLSSPSVDPLRVVIPSGMVTAPADYTCVSVLPGIPAAKLVGLLTPDMPGY
Ga0209387_10037332	3300027639	Agricultural Soil	MRVFPVFFAAAILVAVVGLSAGATDTVVRCGHVSERTPASFVLSSPSVDPLRVVIPSGMVTAPTDYTCVSVLPGIPAAKLVGLLTPDMPGYIAKN
Ga0209387_10746112	3300027639	Agricultural Soil	MRVFPVFFAVAILVAVVGLSAGATDTVVRCGHVSERTPASFVLSSPSVDPLRVVIPSGMVSAPPDYTCVSVLPGRPAAQLVALLTPDMPGYVAQN
Ga0209971_10945901	3300027682	Arabidopsis Thaliana Rhizosphere	MRIFPVFFAVAILVAIVGFSASATDTVVRCGHVTERTPASFVLTSPGVDPLRVAIPSGMIGAPADYTCVSVLPGKPAKLV
Ga0209485_13473242	3300027691	Agricultural Soil	AVAILVAIVGLSAGATDTVVRCGHVSERTPASFVLSSPGVDPLRVVIPSGMVSAPPDYTCVSVLPGLPAAQLVALLTPDMPGYVAEN
Ga0209974_103340872	3300027876	Arabidopsis Thaliana Rhizosphere	MRIFPVFFAVAILVAIVGFSASATDTVVRCGHVTERTPASFVLTSPGVDPLRVAIPSGMIGAPADYTCVSVLPGKPAKLVALVTPDMPGYVAEN
Ga0209481_100824312	3300027880	Populus Rhizosphere	MRVFPVFFAVAILVAIVGLSASATDTVVRCGQVSERTPASFVLSSRGVDPLRIAIPSGMVGAPPDYTCVSVLPGKPAKLVAVLTPDMPGYVAEN
Ga0209486_101622062	3300027886	Agricultural Soil	MRVFPVFFAAAILVAVVGLSAGATDTVVRCGHVSERTPASFVLSSPSVDPLRVVIPSGMVTAPADYTCVSVLPGIPAAKLVGLLTPDMPGYIAKN
Ga0268265_125053391	3300028380	Switchgrass Rhizosphere	MRLFPVFFAVAILVAIVGLSASATDTVVRCGQVSERTPGSFVLSSPGVDPLAVVIPNGVVVAPPEYTCASVLPGRPAA
Ga0137415_101280044	3300028536	Vadose Zone Soil	MRLFPVFFAAAILIAIVGLSASATDTVIRCGQVSERTPASFVLSSPGVDPLRVAIPTGRDIVPADYACVSVLPGTPAAQLVGLLTPDMPGYVAAH
Ga0307293_102392432	3300028711	Soil	LFFAVAILVAIVGLSASATDTVVRCGQVSERTPGSFVLSSQGVDPLPVVIPSGVVIAPPDYTCVSVLPGRPAAKLVALLTPDMPGYVAAQ
Ga0307313_100248652	3300028715	Soil	MRLFPVLFAIAILVAIVGISANATDTVVRCGQVSERTPGSFVLSSPGVDALAVVIPNGVVVAPPDYTCVSVLPGRPAAKLVALLTPDMPGYVAEQ
Ga0307320_101535481	3300028771	Soil	VMRVFPVFFAVAILVAIVGLSASATDTVVRCGQVTERTPASFVLSSPGVDPLRVAIPSGMVGAPTDYTCVSVLPGKPAKLVALVTPDMPGYVAEN
Ga0307299_102697982	3300028793	Soil	MTVMRVFPLFFAVAILVAIVGLSASATDTVVRCGQVSERTPGSFVLSSQGVDPLPVVIPSGVVIAPPDYTCVSVLPGRPAAKLVALLTPDMPGYVAAQ
Ga0307287_100599272	3300028796	Soil	MAVGRAFPLFFAVAILVAIVGLSASATDTVVRCGQVSERTPGSFVLSSPGVDPLAVVIPNGVLVAPPDYTCASVLPGRPAAKLVALLTPDMPGYVAEQ
Ga0307305_101591112	3300028807	Soil	MRLFPVFFAVAILLAVVGLSASATDTVVRCGQVSERTPASFVLSSSGVDPLRVVIPSGKVSAPADYACVSVLPGTPAAQLVGLLTPDMPGYVAQP
Ga0307305_103066382	3300028807	Soil	MRLFPVFFAVAILLAVVGLSASATDTVVRCGQVSERTPASFVLSSSGVDPLRVVIPSGKVGAPADYACVSVLPGTPAAQLVGLLTPDMPGYVAQP
Ga0307302_101153282	3300028814	Soil	MRVFPVFFAVAILIAIVGLSASATDTVVRCGQVSERTPGSFVLSSPGVDPLAVVIPSGVVIAPPDYTCVSVLPGRPAAKLVALLTPDMPGYVAAQ
Ga0307310_104798302	3300028824	Soil	MTVMRVFPLFFAVAILIAIVGLSASATDTVVRCGQVSERTPGSFVLSSPGVDPLAVVIPSGVVVAPPDYTCVSVLPGRPAAQLVALLTPDMPGYVAEQ
Ga0307278_100689891	3300028878	Soil	MRLFPVLFAIAILVAIVGISANATDTVVRCGQVSERTPGSFVLSSPGVDPLAVVIPNGVVVAPPDYTCASVLPGRPAAKLVALLTPDMPGYVAAQ
Ga0307277_100048742	3300028881	Soil	MRVFPVFFAAAILLAIVGLSASATDTVVRCGHVSERTPASFVLSSPGVDPLRVVIPSGKVSAPADYACVSVLPAAPAAQLVGLLTPDMPGYVAQP
Ga0307304_103499602	3300028885	Soil	MTVMRVFPLFFAVAILIAIVGLSASATDTVVRCGQVSERTPGSFVLSSPGVDPLAVVIPNGVVIAPPDYTCASVLPGRPAAKLVALLTPDMPGYVAAQ
Ga0307468_1004984542	3300031740	Hardwood Forest Soil	MTVLRVFPLFFAVAILVAIVGLSASATDTVVRCGQVSERTPGSFVLSSPGVDPLAVVIPNGVVVAPPDYTCASVLPGHPAAKLVALLTPDMPGYVAEH
Ga0326597_115347051	3300031965	Soil	MRIFPVFFAVAILVAIVGLSASATDTVVRCGHVSERTPASFVLSSPGVDPLRVVIPSGMVGAPLDYTCASVLPGRPAAQLVALLTPDMPGYIAEN
Ga0364946_147140_218_505	3300033815	Sediment	MRFFPVFFAIAILVAIVGLSAGAVDTVVRCGHVSERTPASFVLTSPGVDPLRVVIPSGMVGAPPDYTCVSVLPGRRAAQLVALLTPDMPGYVAEN
Ga0364934_0104484_704_991	3300034178	Sediment	MRVFPVFFAVAILVAIVGLSASATDTVVRCGHVSERTPASFVLSSPGVDPLRVVIPSGMVGAPLDYTCASVLPGRPAAQLVALLTPDMPGYVAEN

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F075819

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences