Metagenome / Metatranscriptome Family F075806

Basic Information
Family ID	F075806
Family Type	Metagenome / Metatranscriptome
Number of Sequences	118
Average Sequence Length	43 residues
Representative Sequence	MCNQNEWIVREAFLAYDRGDVARMMDFVDPDLEWTYLDPGL
Number of Associated Samples	91
Number of Associated Scaffolds	118

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	99.15 %
% of genes near scaffold ends (potentially truncated)	98.31 %
% of genes from short scaffolds (< 2000 bps)	95.76 %
Associated GOLD sequencing projects	85
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.60

Most Common Taxonomy
Group	Bacteria (99.153 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (38.136 % of family members)
Environment Ontology (ENVO)	Unclassified (50.000 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (44.915 % of family members)

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 31.88% β-sheet: 0.00% Coil/Unstructured: 68.12%
Feature Viewer

Powered by Feature Viewer

Pfam ID	Name	% Frequency in 118 Family Scaffolds
PF10442	FIST_C	14.41
PF00501	AMP-binding	7.63
PF01738	DLH	5.93
PF12706	Lactamase_B_2	3.39
PF00753	Lactamase_B	3.39
PF00764	Arginosuc_synth	1.69
PF04978	DUF664	1.69
PF08240	ADH_N	1.69
PF13489	Methyltransf_23	0.85
PF10400	Vir_act_alpha_C	0.85
PF02771	Acyl-CoA_dh_N	0.85
PF00805	Pentapeptide	0.85
PF13360	PQQ_2	0.85
PF00890	FAD_binding_2	0.85
PF00296	Bac_luciferase	0.85
PF03070	TENA_THI-4	0.85
PF01872	RibD_C	0.85
PF08241	Methyltransf_11	0.85
PF12850	Metallophos_2	0.85
PF07883	Cupin_2	0.85
PF08044	DUF1707	0.85
PF02861	Clp_N	0.85
PF02899	Phage_int_SAM_1	0.85
PF01513	NAD_kinase	0.85

COG ID	Name	Functional Category	% Frequency in 118 Family Scaffolds
COG0137	Argininosuccinate synthase	Amino acid transport and metabolism [E]	1.69
COG0262	Dihydrofolate reductase	Coenzyme transport and metabolism [H]	0.85
COG0542	ATP-dependent Clp protease, ATP-binding subunit ClpA	Posttranslational modification, protein turnover, chaperones [O]	0.85
COG1357	Uncharacterized conserved protein YjbI, contains pentapeptide repeats	Function unknown [S]	0.85
COG1960	Acyl-CoA dehydrogenase related to the alkylation response protein AidB	Lipid transport and metabolism [I]	0.85
COG1985	Pyrimidine reductase, riboflavin biosynthesis	Coenzyme transport and metabolism [H]	0.85
COG2141	Flavin-dependent oxidoreductase, luciferase family (includes alkanesulfonate monooxygenase SsuD and methylene tetrahydromethanopterin reductase)	Coenzyme transport and metabolism [H]	0.85
COG4973	Site-specific recombinase XerC	Replication, recombination and repair [L]	0.85
COG4974	Site-specific recombinase XerD	Replication, recombination and repair [L]	0.85

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	99.15 %
Unclassified	root	N/A	0.85 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	99.15 %
Unclassified	root	N/A	0.85 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	99.15 %
Unclassified	root	N/A	0.85 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	86.44 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	3.39 %
Unclassified	root	N/A	0.85 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	83.05 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	3.39 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1.69 %
Unclassified	root	N/A	0.85 %

Name	Rank	Taxonomy	Distribution
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	68.64 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	3.39 %
Acidimicrobiia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia	1.69 %
unclassified Chloroflexi	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi	1.69 %
Unclassified	root	N/A	0.85 %

Name	Rank	Taxonomy	Distribution
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	49.15 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	3.39 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1.69 %
Micromonosporales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales	1.69 %
Acidimicrobiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales	1.69 %
Streptosporangiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	0.85 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.85 %
Unclassified	root	N/A	0.85 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	49.15 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	3.39 %
unclassified Acidimicrobiales	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → unclassified Acidimicrobiales	1.69 %
Micromonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	1.69 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1.69 %
Streptosporangiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	0.85 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.85 %
Unclassified	root	N/A	0.85 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	49.15 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	3.39 %
Acidimicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → unclassified Acidimicrobiales → Acidimicrobiales bacterium	1.69 %
Actinoplanes	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Actinoplanes	1.69 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1.69 %
Streptosporangiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	0.85 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.85 %
Unclassified	root	N/A	0.85 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	49.15 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	3.39 %
Acidimicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → unclassified Acidimicrobiales → Acidimicrobiales bacterium	1.69 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1.69 %
unclassified Actinoplanes	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Actinoplanes → unclassified Actinoplanes	0.85 %
Actinoplanes atraurantiacus	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Actinoplanes → Actinoplanes atraurantiacus	0.85 %
Streptosporangiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	0.85 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.85 %
Unclassified	root	N/A	0.85 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	49.15 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	3.39 %
Acidimicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → unclassified Acidimicrobiales → Acidimicrobiales bacterium	1.69 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1.69 %
Actinoplanes sp. TBRC 11911	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Actinoplanes → unclassified Actinoplanes → Actinoplanes sp. TBRC 11911	0.85 %
Actinoplanes atraurantiacus	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Actinoplanes → Actinoplanes atraurantiacus	0.85 %
Streptosporangiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	0.85 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.85 %
Unclassified	root	N/A	0.85 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300005332\|Ga0066388_102492407	All Organisms → cellular organisms → Bacteria	940	Open in IMG/M
3300005467\|Ga0070706_100223767	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1756	Open in IMG/M
3300005535\|Ga0070684_100543362	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1078	Open in IMG/M
3300005764\|Ga0066903_100060684	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	4723	Open in IMG/M
3300005764\|Ga0066903_103053628	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	906	Open in IMG/M
3300005764\|Ga0066903_107149529	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	578	Open in IMG/M
3300006028\|Ga0070717_10207774	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1717	Open in IMG/M
3300006847\|Ga0075431_100945420	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	830	Open in IMG/M
3300009089\|Ga0099828_11611465	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	571	Open in IMG/M
3300009672\|Ga0116215_1035653	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2281	Open in IMG/M
3300009672\|Ga0116215_1305897	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	691	Open in IMG/M
3300009698\|Ga0116216_10606540	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	659	Open in IMG/M
3300009700\|Ga0116217_11038529	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	501	Open in IMG/M
3300010046\|Ga0126384_11190186	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	702	Open in IMG/M
3300010046\|Ga0126384_11435524	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	644	Open in IMG/M
3300010048\|Ga0126373_11506026	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	738	Open in IMG/M
3300010048\|Ga0126373_12634510	Not Available	561	Open in IMG/M
3300010303\|Ga0134082_10438261	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	563	Open in IMG/M
3300010361\|Ga0126378_11364146	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	802	Open in IMG/M
3300010362\|Ga0126377_11027578	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	891	Open in IMG/M
3300010366\|Ga0126379_13174366	All Organisms → cellular organisms → Bacteria	550	Open in IMG/M
3300010379\|Ga0136449_103323520	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	618	Open in IMG/M
3300010398\|Ga0126383_11854300	All Organisms → cellular organisms → Bacteria	691	Open in IMG/M
3300010398\|Ga0126383_12432567	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	608	Open in IMG/M
3300012201\|Ga0137365_10711588	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	734	Open in IMG/M
3300012201\|Ga0137365_10881084	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	653	Open in IMG/M
3300012210\|Ga0137378_10689434	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	932	Open in IMG/M
3300012211\|Ga0137377_11341107	All Organisms → cellular organisms → Bacteria → Terrabacteria group	645	Open in IMG/M
3300012357\|Ga0137384_10398096	All Organisms → cellular organisms → Bacteria	1137	Open in IMG/M
3300012359\|Ga0137385_11612527	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	513	Open in IMG/M
3300016319\|Ga0182033_10292616	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1341	Open in IMG/M
3300016341\|Ga0182035_11625134	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	583	Open in IMG/M
3300016387\|Ga0182040_10609962	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Actinoplanes → Actinoplanes atraurantiacus	884	Open in IMG/M
3300016404\|Ga0182037_10632891	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	910	Open in IMG/M
3300016404\|Ga0182037_11916533	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	531	Open in IMG/M
3300016422\|Ga0182039_10310591	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1310	Open in IMG/M
3300016445\|Ga0182038_10834608	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	809	Open in IMG/M
3300017924\|Ga0187820_1266444	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	555	Open in IMG/M
3300017966\|Ga0187776_11405451	All Organisms → cellular organisms → Bacteria	532	Open in IMG/M
3300017970\|Ga0187783_10889262	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	642	Open in IMG/M
3300018001\|Ga0187815_10513163	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	514	Open in IMG/M
3300018081\|Ga0184625_10459817	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	651	Open in IMG/M
3300020579\|Ga0210407_10490157	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	961	Open in IMG/M
3300021181\|Ga0210388_11057977	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	694	Open in IMG/M
3300021420\|Ga0210394_10755889	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	851	Open in IMG/M
3300021560\|Ga0126371_10725482	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1141	Open in IMG/M
3300021560\|Ga0126371_13420722	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	536	Open in IMG/M
3300022557\|Ga0212123_10185705	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1559	Open in IMG/M
3300025898\|Ga0207692_10294237	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	986	Open in IMG/M
3300025920\|Ga0207649_11665278	All Organisms → cellular organisms → Bacteria	505	Open in IMG/M
3300025922\|Ga0207646_10518104	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1073	Open in IMG/M
3300025922\|Ga0207646_10771582	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	857	Open in IMG/M
3300025922\|Ga0207646_11759059	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	531	Open in IMG/M
3300025929\|Ga0207664_10385085	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1245	Open in IMG/M
3300027854\|Ga0209517_10057521	All Organisms → cellular organisms → Bacteria	2869	Open in IMG/M
3300028718\|Ga0307307_10167256	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	690	Open in IMG/M
3300028784\|Ga0307282_10593982	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	537	Open in IMG/M
3300028811\|Ga0307292_10367558	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	609	Open in IMG/M
3300028819\|Ga0307296_10165141	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1198	Open in IMG/M
3300028819\|Ga0307296_10835152	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	502	Open in IMG/M
3300029636\|Ga0222749_10615100	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	594	Open in IMG/M
3300030494\|Ga0310037_10143800	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1085	Open in IMG/M
3300031234\|Ga0302325_10913070	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1216	Open in IMG/M
3300031544\|Ga0318534_10098020	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1677	Open in IMG/M
3300031549\|Ga0318571_10036319	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1402	Open in IMG/M
3300031549\|Ga0318571_10318047	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	589	Open in IMG/M
3300031564\|Ga0318573_10465219	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → unclassified Acidimicrobiales → Acidimicrobiales bacterium	680	Open in IMG/M
3300031640\|Ga0318555_10817582	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	503	Open in IMG/M
3300031680\|Ga0318574_10286940	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	955	Open in IMG/M
3300031680\|Ga0318574_10749256	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	572	Open in IMG/M
3300031680\|Ga0318574_10926605	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	510	Open in IMG/M
3300031723\|Ga0318493_10305878	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	858	Open in IMG/M
3300031744\|Ga0306918_10838529	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	717	Open in IMG/M
3300031748\|Ga0318492_10525555	All Organisms → cellular organisms → Bacteria	628	Open in IMG/M
3300031748\|Ga0318492_10810344	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	504	Open in IMG/M
3300031768\|Ga0318509_10769728	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	533	Open in IMG/M
3300031769\|Ga0318526_10184231	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	852	Open in IMG/M
3300031770\|Ga0318521_10606583	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	662	Open in IMG/M
3300031771\|Ga0318546_10714637	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	705	Open in IMG/M
3300031778\|Ga0318498_10344523	All Organisms → cellular organisms → Bacteria	666	Open in IMG/M
3300031792\|Ga0318529_10276550	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	782	Open in IMG/M
3300031794\|Ga0318503_10108051	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	886	Open in IMG/M
3300031798\|Ga0318523_10260767	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	866	Open in IMG/M
3300031798\|Ga0318523_10461831	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	629	Open in IMG/M
3300031805\|Ga0318497_10493034	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	686	Open in IMG/M
3300031821\|Ga0318567_10399830	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	778	Open in IMG/M
3300031833\|Ga0310917_10503105	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	824	Open in IMG/M
3300031879\|Ga0306919_11246390	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	564	Open in IMG/M
3300031890\|Ga0306925_12160847	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	519	Open in IMG/M
3300031896\|Ga0318551_10287938	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	923	Open in IMG/M
3300031896\|Ga0318551_10507864	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	691	Open in IMG/M
3300031910\|Ga0306923_11507442	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	703	Open in IMG/M
3300031912\|Ga0306921_10517201	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1387	Open in IMG/M
3300031912\|Ga0306921_10891612	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1010	Open in IMG/M
3300031912\|Ga0306921_11458452	All Organisms → cellular organisms → Bacteria	750	Open in IMG/M
3300031954\|Ga0306926_12074867	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	637	Open in IMG/M
3300031954\|Ga0306926_12121406	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	628	Open in IMG/M
3300031981\|Ga0318531_10500197	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	550	Open in IMG/M
3300031981\|Ga0318531_10582192	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	507	Open in IMG/M
3300032008\|Ga0318562_10363344	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	841	Open in IMG/M
3300032008\|Ga0318562_10785446	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	545	Open in IMG/M
3300032039\|Ga0318559_10232143	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	851	Open in IMG/M
3300032041\|Ga0318549_10251838	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	795	Open in IMG/M
3300032041\|Ga0318549_10326586	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	691	Open in IMG/M
3300032051\|Ga0318532_10337643	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	535	Open in IMG/M
3300032052\|Ga0318506_10118291	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1144	Open in IMG/M
3300032052\|Ga0318506_10558543	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Actinoplanes → unclassified Actinoplanes → Actinoplanes sp. TBRC 11911	507	Open in IMG/M
3300032054\|Ga0318570_10194002	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	916	Open in IMG/M
3300032059\|Ga0318533_10997232	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	614	Open in IMG/M
3300032060\|Ga0318505_10615112	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	510	Open in IMG/M
3300032064\|Ga0318510_10288949	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → unclassified Acidimicrobiales → Acidimicrobiales bacterium	681	Open in IMG/M
3300032076\|Ga0306924_10941891	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	952	Open in IMG/M
3300032076\|Ga0306924_11997740	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	598	Open in IMG/M
3300032090\|Ga0318518_10044043	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2099	Open in IMG/M
3300032090\|Ga0318518_10127606	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1284	Open in IMG/M
3300032160\|Ga0311301_10244199	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2975	Open in IMG/M
3300032783\|Ga0335079_12164854	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	531	Open in IMG/M
3300034818\|Ga0373950_0139114	All Organisms → cellular organisms → Bacteria	549	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	97.46%
Host-Associated	Host-Associated	2.54%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	94.07%
Aquatic	Environmental → Aquatic	3.39%
Plants	Host-Associated → Plants	2.54%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	93.22%
Rhizosphere	Host-Associated → Plants → Rhizosphere	2.54%
Freshwater	Environmental → Aquatic → Freshwater	1.69%
Thermal Springs	Environmental → Aquatic → Thermal Springs	0.85%
Sediment	Environmental → Aquatic → Sediment	0.85%
Peat	Environmental → Terrestrial → Peat	0.85%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	80.51%
Loam	Environmental → Terrestrial → Soil → Loam	10.17%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	2.54%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	1.69%
Soil	Host-Associated → Plants → Rhizosphere → Soil	1.69%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	0.85%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.85%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	0.85%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	0.85%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	53.39%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	27.12%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	6.78%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	3.39%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	2.54%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	1.69%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	1.69%
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	0.85%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.85%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	0.85%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	0.85%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	38.14%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	15.25%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	9.32%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	6.78%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	5.93%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	5.08%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	4.24%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	3.39%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	1.69%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	1.69%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	0.85%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.85%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	0.85%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.85%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	0.85%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	0.85%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	0.85%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.85%
Rhizosphere Soil	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere Soil	0.85%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.85%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005535	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006847	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5	Host-Associated	Open in IMG/M
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental	Open in IMG/M
3300009672	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_2_FS metaG	Environmental	Open in IMG/M
3300009698	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_3_AS metaG	Environmental	Open in IMG/M
3300009700	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_4_PS metaG	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010303	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09182015	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300012201	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012357	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaG	Environmental	Open in IMG/M
3300012359	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaG	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300017924	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_5	Environmental	Open in IMG/M
3300017966	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP12_20_MG	Environmental	Open in IMG/M
3300017970	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300018001	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW-S_5	Environmental	Open in IMG/M
3300018081	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b1	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300021181	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-O	Environmental	Open in IMG/M
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300022557	Paint Pots_combined assembly	Environmental	Open in IMG/M
3300025898	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025920	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025929	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300027854	Peat soil microbial communities from Weissenstadt, Germany - SII-2010 (SPAdes)	Environmental	Open in IMG/M
3300028718	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_194	Environmental	Open in IMG/M
3300028784	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_121	Environmental	Open in IMG/M
3300028811	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_149	Environmental	Open in IMG/M
3300028819	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_153	Environmental	Open in IMG/M
3300029636	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030494	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_3_AS metaG (v2)	Environmental	Open in IMG/M
3300031234	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_2	Environmental	Open in IMG/M
3300031544	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f26	Environmental	Open in IMG/M
3300031549	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f24	Environmental	Open in IMG/M
3300031564	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f21	Environmental	Open in IMG/M
3300031640	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f23	Environmental	Open in IMG/M
3300031680	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f22	Environmental	Open in IMG/M
3300031723	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f23	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031748	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f22	Environmental	Open in IMG/M
3300031768	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f22	Environmental	Open in IMG/M
3300031769	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f24	Environmental	Open in IMG/M
3300031770	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f17	Environmental	Open in IMG/M
3300031771	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19	Environmental	Open in IMG/M
3300031778	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f24	Environmental	Open in IMG/M
3300031792	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f23	Environmental	Open in IMG/M
3300031794	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f23	Environmental	Open in IMG/M
3300031798	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f19	Environmental	Open in IMG/M
3300031805	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f23	Environmental	Open in IMG/M
3300031821	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f20	Environmental	Open in IMG/M
3300031833	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031896	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f19	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300031981	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f25	Environmental	Open in IMG/M
3300032008	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f18	Environmental	Open in IMG/M
3300032039	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f21	Environmental	Open in IMG/M
3300032041	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f22	Environmental	Open in IMG/M
3300032051	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f26	Environmental	Open in IMG/M
3300032052	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f19	Environmental	Open in IMG/M
3300032054	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f23	Environmental	Open in IMG/M
3300032059	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27	Environmental	Open in IMG/M
3300032060	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f18	Environmental	Open in IMG/M
3300032064	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f17	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032090	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f22	Environmental	Open in IMG/M
3300032160	Sb_50d combined assembly (MetaSPAdes)	Environmental	Open in IMG/M
3300032783	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.3	Environmental	Open in IMG/M
3300034818	Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_3	Host-Associated	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.60
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.60
Powered by PDBe Molstar

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F075806

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0066388_1024924071	3300005332	Tropical Forest Soil	MCNQNEWIVREAFLAYNRGDVARMMDYMDPDLDWTYFDPGLG
Ga0070706_1002237674	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	MCNLSEWIVREAFLAYDRGDVAAMMDLVDPCLEWVCLDPGPG
Ga0070684_1005433621	3300005535	Corn Rhizosphere	MCNQNEWIVREAFLAYDRGDVTRMMDFVDPEVDWTYRDPELEDSEPQ
Ga0066903_1000606846	3300005764	Tropical Forest Soil	MCNQNEWIVREAFLAYDKGDVARMMKYVHPDLDWM
Ga0066903_1030536282	3300005764	Tropical Forest Soil	MCNENEWIVREAFLAYDRGDIARMMDFVDPDLEWTYVD
Ga0066903_1071495291	3300005764	Tropical Forest Soil	MCNQNEWIVREAFLAYDRGDVARMMDFVDPDLEWTHLDPSHENPQSLVC
Ga0070717_102077741	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	MCNLSEWIVREAFLAYNRGDVAAMMDFVDPCLEWVCLDPGPGDPQQRIRRGRG
Ga0075431_1009454201	3300006847	Populus Rhizosphere	MCNQNEWIVREAFLAYDRGDVTRMMDFVDPDVDWTYLDSGPEGPR
Ga0099828_116114651	3300009089	Vadose Zone Soil	MCNENEWIVREAFLAYDRGDFARMMEFVDPSLQWTYLDPGLADPPPQVC
Ga0116215_10356531	3300009672	Peatlands Soil	MTVVRGLQMCNLNEWIVREAFLAYDRGDVAAMMDFVDPGLEWTYL
Ga0116215_13058971	3300009672	Peatlands Soil	MCNLNEWIVREAFLAYDRGDVAAMMDFVDPGLEWTYL
Ga0116216_106065401	3300009698	Peatlands Soil	MCNLNEWIVREAFLAYDRGDIAAMMEFVDPGLEWTYLDPGPGNPQPQI
Ga0116217_110385291	3300009700	Peatlands Soil	MCNLNEWIVREAFLAYDRGDIAAMMEFVDPGLEWTYLDPGPGNP
Ga0126384_111901862	3300010046	Tropical Forest Soil	MCNQSEWIVREAYLAYDRGDIARMMDFVDPDLEWTSLDPD
Ga0126384_114355242	3300010046	Tropical Forest Soil	MCNENEWIVREAFLAYDRGDFARMMEFVDPGLQWTYLDPGQAE
Ga0126373_115060261	3300010048	Tropical Forest Soil	MCNQNEWIVREAFLAYDRGDIARMMDLVDADLVWTYLDPAAEDPQ
Ga0126373_126345101	3300010048	Tropical Forest Soil	MCNQNEWIVREAFLAYARGDVARMMEFVDPDLEWTNAGPGPAGSSQVR
Ga0134082_104382612	3300010303	Grasslands Soil	MCNENEWIVREAFLAYDRGDFARMMDFVDPGLQWTYLDPGQAEPAPQVC
Ga0126378_113641461	3300010361	Tropical Forest Soil	MCNENEWIVREAFLAYNRGDVTKMMDYVDPDLDWTYFDPGLGEAEPQACHG
Ga0126377_110275782	3300010362	Tropical Forest Soil	MCNENEWIVREAFLAYDRGDVDRMMDFVDPDLEWTHLDPSLGNS
Ga0126379_131743661	3300010366	Tropical Forest Soil	MCNENEWIVREAFRAYDRGDVARMMDFVDPEVDWTYRDP
Ga0136449_1033235201	3300010379	Peatlands Soil	MCNENEWIVREAFLAYDRGDVRRMMEFVDPDLEWT
Ga0126383_118543001	3300010398	Tropical Forest Soil	MCNENEWIVREAFRAYDRGDVARMMDFVDPEVDWTYRDPELA
Ga0126383_124325672	3300010398	Tropical Forest Soil	MCNQNEWIVREAFLAYDRGDVARMMDFVDPEVDWTYRDP
Ga0137365_107115881	3300012201	Vadose Zone Soil	MCNQNEWIVREAFLAYHRGDVARMMDFVDPDLEWTYLDPGL
Ga0137365_108810842	3300012201	Vadose Zone Soil	MCNLSEWIVREAFLAYDRGDVTVMMDLVDPCLEWVRLDPGPADPRQ
Ga0137378_106894342	3300012210	Vadose Zone Soil	MCNENEWIVREAFLAYDRGDFARMMEFVDPSLQWTYLDPGPADPP
Ga0137377_113411071	3300012211	Vadose Zone Soil	MCNQNEWIVREAFRAYDRGEIARMMDFVDPDLEWTYLDPA
Ga0137384_103980961	3300012357	Vadose Zone Soil	MCNQNEWIVREAFLAYDRGDVARMMDFVDPDLEWTYLDPGL
Ga0137385_116125271	3300012359	Vadose Zone Soil	MCNQNEWIVREAFLAYERGDIARMMDLVDPDLEWTHLDPGLADPQPQL
Ga0182033_102926162	3300016319	Soil	MCNENEWIVREAFLAYDRGDTARMMDFVDPDLEWTYLDPGAE
Ga0182035_116251342	3300016341	Soil	MCNQSEWIVREAFLAYDRGDVTRMMEFVDPDLEWTSLDPSLGPQ
Ga0182040_106099621	3300016387	Soil	MCNENEWIVREAFLAYDRGDTARMMDFVDPDLEWTYLGPGAE
Ga0182037_106328912	3300016404	Soil	MCNQSEWIVREAFLAYDRGDVTRMMEFVDPDLEWTSLDPSLGPQIHHGR
Ga0182037_119165332	3300016404	Soil	MCNENEWIVREAFLAYDRGDYARMMDFVDPGLQWTYLDPG
Ga0182039_103105911	3300016422	Soil	MCNENEWIVREAFLAYDRGDFARMMDFVDPGLQWTYLDPGLAEAASQV
Ga0182038_108346081	3300016445	Soil	MCNENEWIVREAFLAYDRGDTARMMDFVDPDLEWTYLDPGAEEPRPKVR
Ga0187820_12664441	3300017924	Freshwater Sediment	MCNENEWIVREAFLAYDRGDVARMMDFVDPGLEWTHLDPSEENPQA
Ga0187776_114054512	3300017966	Tropical Peatland	MCNQNEWIVREAFLAYDRGDVARMMDFVDPEVDWTYRD
Ga0187783_108892622	3300017970	Tropical Peatland	MCNQNEWIVREAFLAYDRGDISRMMDFVDPDLEWSYLAPGQDQQ
Ga0187815_105131631	3300018001	Freshwater Sediment	MCNQNEWIVREAFLAYNRGDIARMMDFVDPDLEWTYLDPGLEDPQPQTCHG
Ga0184625_104598171	3300018081	Groundwater Sediment	MCNQNEWIVREAFLAYDSGDVARMMDFVDPDVDWT
Ga0210407_104901572	3300020579	Soil	MCNENEWIVREAFLAYDRGDFARMMEFVDPGLQWTYF
Ga0210388_110579772	3300021181	Soil	MCNQNEWIVREAFLAYDQGDVARMMEYVDQDLEWTYLDPALSEPRPQ
Ga0210394_107558891	3300021420	Soil	MCNENEWIVREAFLAYDRGDVTRMMDFVDPELEWIQLEP
Ga0126371_107254821	3300021560	Tropical Forest Soil	MCNENEWIVREAFLAYDRGDFARMMDFVDPGLQWTYLDPGL
Ga0126371_134207221	3300021560	Tropical Forest Soil	LLTGMTVVRDSRMCNQNEWIVREAFLAYDRGDVARMMDFVDPDL
Ga0212123_101857052	3300022557	Iron-Sulfur Acid Spring	MCNENEWIVRDAFLAYDRGDIARMMEFVDPGLEWTYLDPS
Ga0207692_102942372	3300025898	Corn, Switchgrass And Miscanthus Rhizosphere	MCNLSEWIVREALLAYDRGDVAAMMDFVDPCLEWVCLDPGPG
Ga0207649_116652781	3300025920	Corn Rhizosphere	MCNQNEWIVREAFLAYDRGDVTRMMDFVDPEVDWTYRD
Ga0207646_105181042	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	MCNENEWIVREAFLAYDRGDFARMMDFVDPGLRWTYLAPGLPDPP
Ga0207646_107715821	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	MCNLSEWIVREAFLAYDRGDVAAMMDLVDPCLEWVCLDPGPGDPQQRIRRGRG
Ga0207646_117590591	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	MCNQNEWIVREAFLAYDRGDVARMMDFVDPDLEWTYLDPGLEDPQPQVRHG
Ga0207664_103850852	3300025929	Agricultural Soil	MCNENEWIVREAFLAYDRGDFARMMDFVDPGLQWTYLDP
Ga0209517_100575211	3300027854	Peatlands Soil	MCNLNEWIVREAFLAYDRGDVAAMMDFVDPDLEWTYL
Ga0307307_101672561	3300028718	Soil	MCNQNEWIVREAFLAYDRGDVTRMMDFVDPDVDWTYLDSGPEGPRPRICRG
Ga0307282_105939821	3300028784	Soil	MCNENEWIVREAFLAYDRGDVARMMEFVDPDVDWTYLDPG
Ga0307292_103675582	3300028811	Soil	MCNQNEWIVREAFLAYDRGDVTRMMDFVDPDVDWTY
Ga0307296_101651412	3300028819	Soil	MCNQNEWIVREAFLAYDRGDIARMMDLVDPDLDWTYLDPGVEDPQP
Ga0307296_108351522	3300028819	Soil	MCNQNEWIVREAFLAYDSGDVARMMDFVDPDVDWTYLDPGP
Ga0222749_106151001	3300029636	Soil	MCNENEWIVRDAFLAYDRGDIARMMEFVDPGLEWTYLDPSREDPQPQACCGR
Ga0310037_101438001	3300030494	Peatlands Soil	MCNLNEWIVREAFLAYDRGDVAAMMDFVDPGLEWTYLD
Ga0302325_109130703	3300031234	Palsa	MCNHSEWVVREAFLAYDRGDVARMLELVDPDLEWTYLDPSLEDPQTRHGR
Ga0318534_100980201	3300031544	Soil	MCNQNEWIVREAFLAYDRGDVARMMDFVDPDLEWTYLDPGLEDPQPQTLSRSGTD
Ga0318571_100363191	3300031549	Soil	MCNQSEWIVREAFLAYDRGDVTRMMEFVDPDLEWTSLDPS
Ga0318571_103180472	3300031549	Soil	MCNENEWIVREAFLAYDRGDIARMMDFVDPDLEWTYLDPGAED
Ga0318573_104652191	3300031564	Soil	MCNQSEWIVREAFLAYDRGDVTRMMEFVDPDLEWTSLDPSLGPQTH
Ga0318555_108175822	3300031640	Soil	MCNENEWIVREAFLAYDRGDVARMMDFVDPDLEWTHLDPSQGNPQL
Ga0318574_102869402	3300031680	Soil	MCNENEWIVREAFLAYDRGDTARMMDFVDPDLEWTYRDPGAEDPRPKV
Ga0318574_107492561	3300031680	Soil	MCNENEWIVREAFLAYDRGDTARMMDFVDPDLEWTYLDPGAEEPRPKV
Ga0318574_109266052	3300031680	Soil	MCNQNEWIVREAFRAYDSGDVTRMMEFVDPDLEWTFLD
Ga0318493_103058782	3300031723	Soil	MCNQSEWIVREAFLAYDRGDVTRMMEFVDPDLEWTSLDPSLGPQI
Ga0306918_108385292	3300031744	Soil	MCNQNEWIVREAFRAYDCGDVTRMMEFVDPDLEWTS
Ga0318492_105255552	3300031748	Soil	MCNQNEWIVREAFQAYDRGDVTRMMDFVDPEVDWTYRDPELEDSEP
Ga0318492_108103441	3300031748	Soil	MCNENEWIVREAFLAYDRGDTARMMDFVDPDLEWTYLD
Ga0318509_107697282	3300031768	Soil	MCNENEWIVREAFLAYDRGDYARMMEFVDPGLQWFYLDPGLTDPPPQVCRG
Ga0318526_101842312	3300031769	Soil	MCNQNEWIVREAFLAYDRGDVARMLDFVDPGLEWTHLGPGLDASR
Ga0318521_106065831	3300031770	Soil	MCNQNEWIVREAFLAYDRGDVARMLDFVDPGLEWTHLGPGLDASRPWQTG
Ga0318546_107146372	3300031771	Soil	MCNQSEWIVREAFLAYDRGDVTRMMEFVDPDLEWT
Ga0318498_103445232	3300031778	Soil	MCNQNEWIVREAFQAYDRGDVTRMMDFVDPEVDWTYRDPELEDSEPQTGHG
Ga0318529_102765501	3300031792	Soil	MCNENEWIVREAFLAYDRGDFARMMEFVDPGLQWTYLDPGP
Ga0318503_101080511	3300031794	Soil	MCNENEWIVREAFLAYDRGDIARMMDFVDPDLEWTYLDPGAEEPRP
Ga0318523_102607671	3300031798	Soil	MCNQNEWIVREAFLAYDRGDVARMLDFVDPGLEWTHLGPGLD
Ga0318523_104618311	3300031798	Soil	MCNENEWIVREAFLAYDRGDVRRMMEFVDPDLKWTHPD
Ga0318497_104930341	3300031805	Soil	MCNENEWIVREAFLAYDRGDFARMMEFVDPGLKWTY
Ga0318567_103998301	3300031821	Soil	MCNENEWIVREAFLAYDRGDIARMMDFVDPDLEWTYLDPGAEDPRPKV
Ga0310917_105031051	3300031833	Soil	MCNQNEWIVREAFLAYDRGDVARMLDFVDPGLEWTHLGPGLDASRPPVCHG
Ga0306919_112463902	3300031879	Soil	MCNQNEWIVREAFLAYDRGDVARMMDFVDPGLEWTYLDP
Ga0306925_121608471	3300031890	Soil	MCNENEWIVREAFLAYDRGDFARMMEFVDPGLQWTY
Ga0318551_102879382	3300031896	Soil	MCNENEWIVREAFLAYDRGDFARMMEFVDPGLQWT
Ga0318551_105078641	3300031896	Soil	MCNENEWIVREAFLAYDRGDTARMMDFVDPDLEWTYLDPGAEDPRPDQ
Ga0306923_115074422	3300031910	Soil	MCNQSEWIVREAFLAYDRGDVTRMMEFVDPDLEWTYFEPGL
Ga0306921_105172011	3300031912	Soil	MCNENEWIVREAFLAYDRGDVTRMMEFVDPDLEWTHLDPSQGYSQLRTDHGR
Ga0306921_108916121	3300031912	Soil	MCNENEWIVREAFLAYDRGDFAHMMDFVDAGLQWTYLDPG
Ga0306921_114584521	3300031912	Soil	MCNENEWIVREAFLAYDRGDVRRMMELVDPDLEWTHLDPDHGNPQCD
Ga0306926_120748671	3300031954	Soil	MIGVRPNMCNQNEWIVREAFLAYDRGDVARVLDFVDPGLE
Ga0306926_121214061	3300031954	Soil	MCNENEWIVREAFLAYDRGDIARMMDFVDPDLEWTYLDLGAEDPQPK
Ga0318531_105001971	3300031981	Soil	MCNENEWIVREAFLAYDRGDIARMMDFVDPELDWTY
Ga0318531_105821921	3300031981	Soil	MCNENEWIVREAFLAYDRGDTARMMDFVDPDLEWTYLDPGAEDPRPK
Ga0318562_103633442	3300032008	Soil	MCNENEWIVREAFLAYDRGDTARMMDFVDPDLEWTY
Ga0318562_107854461	3300032008	Soil	MCNENEWIVREAFLAYDRGDTARMMDFVDPDLEWTYLDPGAEEPRPDQG
Ga0318559_102321432	3300032039	Soil	MCNQSEWIVREAFLAYDRGDVTRMMEFVDPDLEWTSLDPSLGPQIH
Ga0318549_102518382	3300032041	Soil	MCNENEWIVREAFLAYDRGDFARMMEFVDPGLQWTYLDPGLADTAPQV
Ga0318549_103265862	3300032041	Soil	MCNENEWIVREAFLAYDRGDIARMMDFVDPDLEWTY
Ga0318532_103376431	3300032051	Soil	MCNENEWIVREAFLAYDRGDTARMMDFVDPDLEWTYLDPGAEDPRPR
Ga0318506_101182911	3300032052	Soil	MCNENEWIVREAFLAYDRGDTARMMDFVDPDLEWTYLDPGAEEPRPKVRHG
Ga0318506_105585431	3300032052	Soil	MCNQNEWIVREAFLAYDRGDVARMMDFVDPGLEWTYLDPGLDDSQPEIC
Ga0318570_101940022	3300032054	Soil	MCNENEWIVREAFLAYDRGDTARMMDFVDPDLEWTYLDPGAEDPRPDQG
Ga0318533_109972321	3300032059	Soil	MCNQNEWIVREAFLAYDRGDVARMMDFVDPDLEWTH
Ga0318505_106151122	3300032060	Soil	MCNQNEWIVREAFLAYDRGDVTRMMDFVDPEVDWTYRDPEL
Ga0318510_102889491	3300032064	Soil	MCNQNEWIVREAFLAYDRGDVARMMEFVDPDLEWTFLD
Ga0306924_109418911	3300032076	Soil	MCNENEWIVREAFLAYDRGDFARMMEFVDPGLQWTYLDPGPADTAPQVCH
Ga0306924_119977401	3300032076	Soil	MCNENEWIVREAFLAYDRGDIARVMDFVDPDLEWTYLDPGP
Ga0318518_100440434	3300032090	Soil	MCNENEWIVREAFLAYDRGDTARMMDFVDPDLEWTYLDPGAEEPRPN
Ga0318518_101276063	3300032090	Soil	MCNQNEWIVREAFLAYDRGDVARMMDFVDPDLEWTYLDPGLEDPQPQT
Ga0311301_102441991	3300032160	Peatlands Soil	MCNLNEWIVREAFLAYDRGDVAAMMNFVDPGLEWTYLDPGPGNPQPQI
Ga0335079_121648542	3300032783	Soil	MCNQNEWIVREAFLAYDRGDVARMMDFVDPDVDWTYRDPAL
Ga0373950_0139114_1_120	3300034818	Rhizosphere Soil	MCNQNEWIVREAFLAYDRGDVTRMMDFVDPEVDWTYRDPE

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign