Metagenome / Metatranscriptome Family F075363

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F075363
Family Type	Metagenome / Metatranscriptome
Number of Sequences	119
Average Sequence Length	108 residues
Representative Sequence	KELDIQWLNSTSVHAEDKLSMKLRATEAGQGIAGARLTVRFARANADPFYTQVTTDMSGDAELEFLVEEASLEDSSVLVQVNSGGRTATRKFQLRRVGA
Number of Associated Samples	102
Number of Associated Scaffolds	119

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	0.00 %
% of genes near scaffold ends (potentially truncated)	98.32 %
% of genes from short scaffolds (< 2000 bps)	89.92 %
Associated GOLD sequencing projects	93
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.80

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (83.193 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere (12.605 % of family members)
Environment Ontology (ENVO)	Unclassified (33.613 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (50.420 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 2.36% β-sheet: 43.31% Coil/Unstructured: 54.33%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.80
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.80
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Structural matches with SCOPe domains

SCOP family	SCOP domain	Representative PDB	TM-score
b.1.29.5: Macroglobulin	d3cu7a4	3cu7	0.83
b.1.29.4: Macroglobulin	d2a73a3	2a73	0.76
b.1.29.4: Macroglobulin	d3cu7a3	3cu7	0.76
b.1.29.3: Macroglobulin	d2a73a2	2a73	0.73
b.1.29.3: Macroglobulin	d3cu7a2	3cu7	0.72

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 119 Family Scaffolds
PF02597	ThiS	21.85
PF00005	ABC_tran	18.49
PF00782	DSPc	7.56
PF13411	MerR_1	5.88
PF13581	HATPase_c_2	4.20
PF00717	Peptidase_S24	3.36
PF13302	Acetyltransf_3	1.68
PF00925	GTP_cyclohydro2	1.68
PF02803	Thiolase_C	0.84
PF13620	CarboxypepD_reg	0.84
PF13826	DUF4188	0.84
PF10502	Peptidase_S26	0.84
PF01384	PHO4	0.84

COG ID	Name	Functional Category	% Frequency in 119 Family Scaffolds
COG1977	Molybdopterin synthase sulfur carrier subunit MoaD	Coenzyme transport and metabolism [H]	21.85
COG2104	Sulfur carrier protein ThiS (thiamine biosynthesis)	Coenzyme transport and metabolism [H]	21.85
COG0807	GTP cyclohydrolase II	Coenzyme transport and metabolism [H]	1.68
COG0183	Acetyl-CoA acetyltransferase	Lipid transport and metabolism [I]	0.84
COG0306	Phosphate/sulfate permease	Inorganic ion transport and metabolism [P]	0.84

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	83.19 %
Unclassified	root	N/A	16.81 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	83.19 %
Unclassified	root	N/A	16.81 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	83.19 %
Unclassified	root	N/A	16.81 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	57.98 %
Unclassified	root	N/A	16.81 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	8.40 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	2.52 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.84 %

Name	Rank	Taxonomy	Distribution
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	23.53 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	23.53 %
Unclassified	root	N/A	16.81 %
Gemmatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	8.40 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1.68 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.84 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	23.53 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	21.85 %
Unclassified	root	N/A	16.81 %
unclassified Gemmatimonadetes	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes	8.40 %
Alphaproteobacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Alphaproteobacteria incertae sedis	1.68 %
Bryobacterales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales	0.84 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.84 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	23.53 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	21.85 %
Unclassified	root	N/A	16.81 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	8.40 %
Micavibrio	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Alphaproteobacteria incertae sedis → Micavibrio	1.68 %
Solibacteraceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae	0.84 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.84 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	23.53 %
Unclassified	root	N/A	16.81 %
Candidatus Koribacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	15.97 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	8.40 %
Micavibrio	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Alphaproteobacteria incertae sedis → Micavibrio	1.68 %
Candidatus Sulfopaludibacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter	0.84 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.84 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	23.53 %
Unclassified	root	N/A	16.81 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	8.40 %
Candidatus Koribacter versatilis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	5.04 %
Micavibrio	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Alphaproteobacteria incertae sedis → Micavibrio	1.68 %
unclassified Candidatus Sulfopaludibacter	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter	0.84 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.84 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	23.53 %
Unclassified	root	N/A	16.81 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	8.40 %
Candidatus Koribacter versatilis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	5.04 %
Micavibrio	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Alphaproteobacteria incertae sedis → Micavibrio	1.68 %
Candidatus Sulfopaludibacter sp. SbA6	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter → Candidatus Sulfopaludibacter sp. SbA6	0.84 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.84 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001904\|JGI24736J21556_1040704	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	714	Open in IMG/M
3300002914\|JGI25617J43924_10340648	All Organisms → cellular organisms → Bacteria	520	Open in IMG/M
3300004153\|Ga0063455_100478894	All Organisms → cellular organisms → Bacteria → Acidobacteria	767	Open in IMG/M
3300004479\|Ga0062595_100611610	Not Available	852	Open in IMG/M
3300004480\|Ga0062592_100045348	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	2335	Open in IMG/M
3300005167\|Ga0066672_10515992	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	775	Open in IMG/M
3300005176\|Ga0066679_10846504	All Organisms → cellular organisms → Bacteria → Acidobacteria	580	Open in IMG/M
3300005179\|Ga0066684_10019415	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	3504	Open in IMG/M
3300005187\|Ga0066675_10320690	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	1126	Open in IMG/M
3300005327\|Ga0070658_11158222	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	672	Open in IMG/M
3300005332\|Ga0066388_100814014	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	1525	Open in IMG/M
3300005332\|Ga0066388_107401671	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	551	Open in IMG/M
3300005333\|Ga0070677_10448865	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	689	Open in IMG/M
3300005355\|Ga0070671_102026242	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	512	Open in IMG/M
3300005434\|Ga0070709_11117824	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	631	Open in IMG/M
3300005435\|Ga0070714_100350217	All Organisms → cellular organisms → Bacteria	1387	Open in IMG/M
3300005435\|Ga0070714_101150993	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	756	Open in IMG/M
3300005435\|Ga0070714_102394695	All Organisms → cellular organisms → Bacteria → Acidobacteria	513	Open in IMG/M
3300005436\|Ga0070713_101173113	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	743	Open in IMG/M
3300005439\|Ga0070711_100322374	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	1235	Open in IMG/M
3300005457\|Ga0070662_100530608	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	984	Open in IMG/M
3300005467\|Ga0070706_102031755	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	520	Open in IMG/M
3300005530\|Ga0070679_101815897	Not Available	558	Open in IMG/M
3300005536\|Ga0070697_101414546	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	621	Open in IMG/M
3300005537\|Ga0070730_10785771	Not Available	600	Open in IMG/M
3300005539\|Ga0068853_100937090	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	832	Open in IMG/M
3300005560\|Ga0066670_10416807	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	825	Open in IMG/M
3300005575\|Ga0066702_10171614	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	1297	Open in IMG/M
3300005615\|Ga0070702_100370290	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1015	Open in IMG/M
3300005764\|Ga0066903_100816520	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	1671	Open in IMG/M
3300005952\|Ga0080026_10166142	All Organisms → cellular organisms → Bacteria → Acidobacteria	644	Open in IMG/M
3300006028\|Ga0070717_11920234	Not Available	534	Open in IMG/M
3300006028\|Ga0070717_11946264	Not Available	530	Open in IMG/M
3300006032\|Ga0066696_10045411	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	2437	Open in IMG/M
3300006034\|Ga0066656_10384874	All Organisms → cellular organisms → Bacteria	907	Open in IMG/M
3300006163\|Ga0070715_10627982	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	633	Open in IMG/M
3300006163\|Ga0070715_10815896	Not Available	567	Open in IMG/M
3300006175\|Ga0070712_100374854	All Organisms → cellular organisms → Bacteria	1170	Open in IMG/M
3300006796\|Ga0066665_11135172	Not Available	595	Open in IMG/M
3300006800\|Ga0066660_10627762	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	895	Open in IMG/M
3300006914\|Ga0075436_100261013	All Organisms → cellular organisms → Bacteria	1235	Open in IMG/M
3300009137\|Ga0066709_100542240	All Organisms → cellular organisms → Bacteria → Acidobacteria	1646	Open in IMG/M
3300009137\|Ga0066709_103099558	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	608	Open in IMG/M
3300009545\|Ga0105237_11466411	Not Available	689	Open in IMG/M
3300009551\|Ga0105238_11253785	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	766	Open in IMG/M
3300009551\|Ga0105238_12599003	Not Available	542	Open in IMG/M
3300010046\|Ga0126384_10662843	All Organisms → cellular organisms → Bacteria → Proteobacteria	921	Open in IMG/M
3300010047\|Ga0126382_12326589	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	518	Open in IMG/M
3300010048\|Ga0126373_11129553	All Organisms → cellular organisms → Bacteria → Acidobacteria	850	Open in IMG/M
3300010048\|Ga0126373_11451295	Not Available	751	Open in IMG/M
3300010321\|Ga0134067_10081777	All Organisms → cellular organisms → Bacteria	1083	Open in IMG/M
3300010358\|Ga0126370_10483136	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1042	Open in IMG/M
3300010359\|Ga0126376_12133422	Not Available	604	Open in IMG/M
3300010361\|Ga0126378_10107822	All Organisms → cellular organisms → Bacteria → Acidobacteria	2763	Open in IMG/M
3300010361\|Ga0126378_11011358	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	935	Open in IMG/M
3300010371\|Ga0134125_10383182	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1560	Open in IMG/M
3300010373\|Ga0134128_11958875	Not Available	645	Open in IMG/M
3300010396\|Ga0134126_12340683	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	582	Open in IMG/M
3300010876\|Ga0126361_10673786	Not Available	508	Open in IMG/M
3300012199\|Ga0137383_10472220	All Organisms → cellular organisms → Bacteria	919	Open in IMG/M
3300012200\|Ga0137382_10674823	All Organisms → cellular organisms → Bacteria	740	Open in IMG/M
3300012201\|Ga0137365_11293198	Not Available	518	Open in IMG/M
3300012207\|Ga0137381_11401871	All Organisms → cellular organisms → Bacteria → Acidobacteria	591	Open in IMG/M
3300012209\|Ga0137379_10558905	All Organisms → cellular organisms → Bacteria → Acidobacteria	1052	Open in IMG/M
3300012349\|Ga0137387_10548527	All Organisms → cellular organisms → Bacteria → Acidobacteria	839	Open in IMG/M
3300012349\|Ga0137387_11062085	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	578	Open in IMG/M
3300012351\|Ga0137386_10193138	All Organisms → cellular organisms → Bacteria	1462	Open in IMG/M
3300012351\|Ga0137386_10904621	All Organisms → cellular organisms → Bacteria → Acidobacteria	632	Open in IMG/M
3300012354\|Ga0137366_10797708	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	670	Open in IMG/M
3300012357\|Ga0137384_10578232	All Organisms → cellular organisms → Bacteria	918	Open in IMG/M
3300012358\|Ga0137368_10537077	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	749	Open in IMG/M
3300012917\|Ga0137395_11107276	All Organisms → cellular organisms → Bacteria → Acidobacteria	561	Open in IMG/M
3300012957\|Ga0164303_11544309	Not Available	503	Open in IMG/M
3300012988\|Ga0164306_10935731	All Organisms → cellular organisms → Bacteria → Acidobacteria	709	Open in IMG/M
3300013104\|Ga0157370_10056323	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	3742	Open in IMG/M
3300013307\|Ga0157372_10140053	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	2786	Open in IMG/M
3300013307\|Ga0157372_10905604	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1023	Open in IMG/M
3300014157\|Ga0134078_10262032	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	729	Open in IMG/M
3300014969\|Ga0157376_12053193	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	610	Open in IMG/M
3300015372\|Ga0132256_101472568	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	792	Open in IMG/M
3300015372\|Ga0132256_103141396	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	555	Open in IMG/M
3300016357\|Ga0182032_11933718	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	517	Open in IMG/M
3300017930\|Ga0187825_10363335	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	550	Open in IMG/M
3300018468\|Ga0066662_10889328	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	873	Open in IMG/M
3300018482\|Ga0066669_10723868	All Organisms → cellular organisms → Bacteria	877	Open in IMG/M
3300018482\|Ga0066669_11550584	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter → Candidatus Sulfopaludibacter sp. SbA6	603	Open in IMG/M
3300019361\|Ga0173482_10129115	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	957	Open in IMG/M
3300020010\|Ga0193749_1002933	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	3247	Open in IMG/M
3300020018\|Ga0193721_1071231	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	906	Open in IMG/M
3300021377\|Ga0213874_10030658	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	1551	Open in IMG/M
3300021432\|Ga0210384_11646046	Not Available	547	Open in IMG/M
3300025899\|Ga0207642_10702945	Not Available	637	Open in IMG/M
3300025904\|Ga0207647_10581598	Not Available	619	Open in IMG/M
3300025906\|Ga0207699_10071962	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	2116	Open in IMG/M
3300025906\|Ga0207699_10640673	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	776	Open in IMG/M
3300025910\|Ga0207684_11690617	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	510	Open in IMG/M
3300025911\|Ga0207654_10056601	All Organisms → cellular organisms → Bacteria	2275	Open in IMG/M
3300025914\|Ga0207671_10477561	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Alphaproteobacteria incertae sedis → Micavibrio	994	Open in IMG/M
3300025928\|Ga0207700_11643977	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	568	Open in IMG/M
3300025929\|Ga0207664_10303159	All Organisms → cellular organisms → Bacteria	1406	Open in IMG/M
3300025929\|Ga0207664_10345471	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1316	Open in IMG/M
3300025949\|Ga0207667_10821134	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	925	Open in IMG/M
3300026078\|Ga0207702_10265424	All Organisms → cellular organisms → Bacteria	1618	Open in IMG/M
3300026089\|Ga0207648_10234853	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1631	Open in IMG/M
3300026095\|Ga0207676_10131929	All Organisms → cellular organisms → Bacteria	2125	Open in IMG/M
3300026142\|Ga0207698_10842389	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Alphaproteobacteria incertae sedis → Micavibrio	921	Open in IMG/M
3300026291\|Ga0209890_10137773	Not Available	819	Open in IMG/M
3300026330\|Ga0209473_1017273	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	3420	Open in IMG/M
3300026527\|Ga0209059_1091939	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1262	Open in IMG/M
3300027432\|Ga0209421_1025217	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1153	Open in IMG/M
3300027857\|Ga0209166_10638272	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	539	Open in IMG/M
3300028536\|Ga0137415_10853948	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	720	Open in IMG/M
3300031057\|Ga0170834_105353193	All Organisms → cellular organisms → Bacteria	867	Open in IMG/M
3300031716\|Ga0310813_10529966	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1033	Open in IMG/M
3300031716\|Ga0310813_11098605	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	729	Open in IMG/M
3300031754\|Ga0307475_10228585	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1490	Open in IMG/M
3300031910\|Ga0306923_10819234	Not Available	1026	Open in IMG/M
3300032892\|Ga0335081_10156636	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	3244	Open in IMG/M
3300033475\|Ga0310811_11478851	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	508	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	78.15%
Host-Associated	Host-Associated	21.85%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	77.31%
Plants	Host-Associated → Plants	21.85%
Aquatic	Environmental → Aquatic	0.84%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	77.31%
Rhizosphere	Host-Associated → Plants → Rhizosphere	13.45%
Rhizoplane	Host-Associated → Plants → Rhizoplane	7.56%
Freshwater	Environmental → Aquatic → Freshwater	0.84%
Roots	Host-Associated → Plants → Roots	0.84%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	52.94%
Loam	Environmental → Terrestrial → Soil → Loam	21.85%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	8.40%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	7.56%
Soil	Host-Associated → Plants → Rhizosphere → Soil	5.04%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	2.52%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	0.84%
Unclassified	Host-Associated → Plants → Roots → Unclassified	0.84%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	31.93%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	17.65%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	15.13%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	8.40%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	7.56%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	5.04%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	4.20%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	3.36%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.68%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	1.68%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	0.84%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.84%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.84%
Unclassified	Host-Associated → Plants → Roots → Unclassified → Unclassified	0.84%

Habitat	Taxonomy	Distribution
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	12.61%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	11.76%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	10.08%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	6.72%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	6.72%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	5.04%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	5.04%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	4.20%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	4.20%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	2.52%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	2.52%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	2.52%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	1.68%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	1.68%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	1.68%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	1.68%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	1.68%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	1.68%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	1.68%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	0.84%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.84%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.84%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.84%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.84%
Permafrost Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost Soil	0.84%
Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Soil	0.84%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.84%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	0.84%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	0.84%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.84%
Plant Roots	Host-Associated → Plants → Roots → Unclassified → Unclassified → Plant Roots	0.84%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.84%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.84%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.84%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	0.84%
Boreal Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil	0.84%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001904	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2	Host-Associated	Open in IMG/M
3300002914	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm	Environmental	Open in IMG/M
3300004153	Grasslands soil microbial communities from Hopland, California, USA (version 2)	Environmental	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300004480	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4	Environmental	Open in IMG/M
3300005167	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121	Environmental	Open in IMG/M
3300005176	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128	Environmental	Open in IMG/M
3300005179	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133	Environmental	Open in IMG/M
3300005187	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124	Environmental	Open in IMG/M
3300005327	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG	Host-Associated	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005333	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG	Host-Associated	Open in IMG/M
3300005355	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG	Host-Associated	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005457	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG	Host-Associated	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005530	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005537	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen01_05102014_R1	Environmental	Open in IMG/M
3300005539	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2	Host-Associated	Open in IMG/M
3300005560	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_119	Environmental	Open in IMG/M
3300005575	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_151	Environmental	Open in IMG/M
3300005615	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005952	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 1 DNA2013-045	Environmental	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006032	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145	Environmental	Open in IMG/M
3300006034	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_105	Environmental	Open in IMG/M
3300006163	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006796	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114	Environmental	Open in IMG/M
3300006800	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109	Environmental	Open in IMG/M
3300006914	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5	Host-Associated	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009545	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG	Host-Associated	Open in IMG/M
3300009551	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG	Host-Associated	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010321	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09212015	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010371	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300010396	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2	Environmental	Open in IMG/M
3300010876	Boreal forest soil eukaryotic communities from Alaska, USA - W5-5 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012201	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012349	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaG	Environmental	Open in IMG/M
3300012351	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_100_16 metaG	Environmental	Open in IMG/M
3300012354	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_60_16 metaG	Environmental	Open in IMG/M
3300012357	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaG	Environmental	Open in IMG/M
3300012358	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_100_16 metaG	Environmental	Open in IMG/M
3300012917	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaG	Environmental	Open in IMG/M
3300012957	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MG	Environmental	Open in IMG/M
3300012988	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_242_MG	Environmental	Open in IMG/M
3300013104	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG	Host-Associated	Open in IMG/M
3300013307	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG	Host-Associated	Open in IMG/M
3300014157	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_20cm_2_24_1 metaG	Environmental	Open in IMG/M
3300014969	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300017930	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_5	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300019361	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S133-311R-2 (version 2)	Environmental	Open in IMG/M
3300020010	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L1s2	Environmental	Open in IMG/M
3300020018	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2s2	Environmental	Open in IMG/M
3300021377	Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7	Host-Associated	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300025899	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025904	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes)	Host-Associated	Open in IMG/M
3300025906	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025911	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025914	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025929	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025949	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026078	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026089	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026095	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026142	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026291	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 3 DNA2013-049 (SPAdes)	Environmental	Open in IMG/M
3300026330	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133 (SPAdes)	Environmental	Open in IMG/M
3300026527	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_151 (SPAdes)	Environmental	Open in IMG/M
3300027432	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_O2 (SPAdes)	Environmental	Open in IMG/M
3300027857	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen01_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300028536	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300031057	Oak Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031716	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YN3	Environmental	Open in IMG/M
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300032892	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.5	Environmental	Open in IMG/M
3300033475	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YC	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI24736J21556_10407042	3300001904	Corn Rhizosphere	QWVNAESVHAGEKLSVRLRATEGGLGIANARLTVRLARTNAAPFYTQLTTDNLGEAELVVIVEESSLADSSVLVQVNSSGRTATRKFQMRRVEA*
JGI25617J43924_103406481	3300002914	Grasslands Soil	TLAAEKELDIQWLNAESVHVEDKLSMKLRATEAGQGIAGARMTVRFARPNADPFYTQVTTDASGDAELVFLVEEAALPEASVLVQMNSAGRTATRKFQLRKVGA*
Ga0063455_1004788941	3300004153	Soil	NSHSIHAEEQLSMKLRATESGQPVPGARLTVRFARINAAPFYAQMITDGAGEAVLVLAVEEGSLSESSVLVQMNAQGRTATRKFQLRRAHSS*
Ga0062595_1006116101	3300004479	Soil	PYAEQAKSPGFTDQKKEEILREQHRVVLDAIRNGQLEQVFDKRESPETLAAIKELDIQWLNSDSVHTDDKLAMKLRATEDGKGIAAARLTVRFARPNAGPFYTQVSTDGSGDAELAFEVDENSLPEASLLVQVNVSGRTATRKFQLKRVEGTTP*
Ga0062592_1000453484	3300004480	Soil	VHAGEKLSVRLRATEGGLGVANARLTVRLARDNAAPFYTQLTTDNAGEAELVVIVEESSLATSSVLVQVNSSGRTATRKFQMRHVEA*
Ga0066672_105159921	3300005167	Soil	ESLGAIKELDIQWINSHSIHAEEQLSMKLRATESGQPLPGARLTVRLARANAVPFYAQMITDSSGEAVLALAVEEGSLSDSSVLVQMNAQGRTATRKFQLRRVQS*
Ga0066679_108465042	3300005176	Soil	QLSMKLRATESGQPVPGARLTVRFARTNAAPFYAQMITDGSGEAVLVLAVEEGSLSESSVLVQMNAQGRTATRKFQLRRAHS*
Ga0066684_100194155	3300005179	Soil	SLAAIKELDIQWLNSDSVHAQDKLAMKLRASEDGKGIAGARLTVRFARPNADPFYTQLMTDASGDAELVFEVGEDQLPEASLLVQVNNSGKTATRKFQLRRVEG*
Ga0066675_103206901	3300005187	Soil	LEQVFDKRDTPESLAAIKELDIQWLNSDSVHAYDKLAMKLRASEDGKGIAGARLTVRFARPNADPFYTQVMTDASGDAELVFEIGEDQLPQASLLVQVNNSGRTATRKFQLRRVER*
Ga0070658_111582222	3300005327	Corn Rhizosphere	IQWVNAESVHAGEKLSVRLRATEGGLGVANARLTVRLARDNAAPFYTQLTTDNAGEAELVVIVEESSLATSSVLVQVNSSGRTATRKFQMRHVEA*
Ga0066388_1008140141	3300005332	Tropical Forest Soil	LNSGSVHSKDQLSMKLRATEAGQGIEAATLTIRFSRPDADPFFTQTTTNPSGEAELLFAVDEASLYDSTLLVQVRFQNRTATRKFQLKRV*
Ga0066388_1074016712	3300005332	Tropical Forest Soil	KELDIQWLNSDSVHLQDQLSMRLRATETGQGIAGARLTVRFTRPNADPFYTQVTTGDAGEAELALVVDESLMADASILVQVNASGRTATRKFQLRRVEA*
Ga0070677_104488652	3300005333	Miscanthus Rhizosphere	ESVHAGEKLSVRLRATEGGLGIANARLTVRLARTNAAPFYTQLTTDNLGEAELVVIVEESSLADSSVLVQVNSSGRTATRKFQMRRVEA*
Ga0070671_1020262421	3300005355	Switchgrass Rhizosphere	KELDIQWLNSDSVHTDDKLAMKLRATEDGKGIAAARLTVRFARPNAGPFYTQVSTDGSGDAELAFEVDENSLPEASLLVQVNVSGRTATRKFQLRRVEK*
Ga0070709_111178242	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	LAAIKELDIQLLNAESIHSGEKLSMKLRATEGEQGIANARLTIRLARANSAPFYMQLTTDQSGEAELEVLVEESALTDSSVLVQVNASGRTATRKFQLKKVGA*
Ga0070714_1003502174	3300005435	Agricultural Soil	DIQWVNSHSIHAEEQLSMKLRATESGQPVPGARLTVRFARINAAPFYAQMITDGAGEAVLVLAVEEGSLSESSVLVQMNAQGRTATRKFQLRRAHT*
Ga0070714_1011509932	3300005435	Agricultural Soil	IREGRLEEVFDNRDTPETLAAIKQLDIQWLNANSIHSEEKLSVRLRATEDGQSIANARLIVRLARANAAPFYTQLTTNDTGEAELVVLVDESSLADSSVLVQVNSSGRTATRKFQLRRLEA*
Ga0070714_1023946952	3300005435	Agricultural Soil	HSIHAEEQLSMKLRATESGQPVPGARLTVRFARINAAPFYAQMITDGAGEAVLVLAVEEGSLSESSVLVQMNAQGRTATRKFQLRRAHSS*
Ga0070713_1011731131	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	NAESIHSGEKLSMKLRATEGGQGIANARLTIRLARSKADPFYMQLTTDQSGEAELEVLVEESALTDSSVLVQVNSAGRTATRKFQFRRTETR*
Ga0070711_1003223741	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	HLQEVFDKRETPETLAAIKQLDIQWVNANSIHAEEKLSVRLRATEDGQGLANARLIVRLARSNAAPFYTQLTTNDTGEAELVVLVDEASLADSSVLVQVNSSGRTATRKFQLRRLEA*
Ga0070662_1005306082	3300005457	Corn Rhizosphere	EGRLQEVFDNRETPETLAAIKELDIQWVNAESVHAGEKLSVRLRATEGGLGVANARLTVRLARDNAAPFYTQLTTDNAGEAELVVIVEESSLATSSVLVQVNSSGRTATRKFQMRHVEA*
Ga0070706_1020317551	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	IRDGRLDQVFDKRETPETLAAEKELDIQWLNSESVHAEDKLSMKLHATEAGQGIAGARLTVRFARANADPFYTQVTTDASGDAELVFMVEEASMSDSSVLVQVNSAGRTATRKFQLRKVGA*
Ga0070679_1018158971	3300005530	Corn Rhizosphere	NSDSVHTDDKLAMKLRATEDGKGIAAARLTVRFARPDAGPFYTQVSTDGSGEAELAFEVDENSLPEASLLVQVNVSGRTATRKFQLKRVEK*
Ga0070697_1014145461	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	VLDAIRDGRLEQVFDKRETPETLAAEKELDIQWLNSESVHAEDKLSMKLHATEAGQGIAGARLTVRFARANADPFYTQVTTDASGDAELVFMVEEASMSDSSVLVQVNSAGRTATRKFQLRKVGA*
Ga0070730_107857711	3300005537	Surface Soil	RQVLDAIREGKLEEVFDKREGADSLSAIKELDIQWVNSHSIHAEEQLSMKLRATESGQPVSGARLTVRFARTNAAPFYAQMVTDAAGEAVLVLAVEEGSLSESSVLVQMSAQGRTATRKFQLRRAQS*
Ga0068853_1009370902	3300005539	Corn Rhizosphere	DNRDTPETLATIKELDIQWVNAESVHAGEKLSVRLRATEGGLGIANARLTVRLARTNAAPFYTQLTTDNLGEAELVVIVEESSLADSSVLVQVNSSGRTATRKFQMRRVEA*
Ga0066670_104168073	3300005560	Soil	EEQLSMKLRATESGQPVPGARLTVRFARTNAAPFYAQMITDGSGEAVLVLAVEEGSLSESSVLVQMNAQGRTATRKFQLKRAHS*
Ga0066702_101716141	3300005575	Soil	LDAIRDGRLEQVFDKRETPETLAAEKELDIQWLNSDSVHSEDQLAMKLRATEAGQGIAGARLTVRFARPNADPFYTQVTTDASGDAEILLLVEEASMADASLLVQMNAQGRTATRKFQLRRVGA*
Ga0070702_1003702901	3300005615	Corn, Switchgrass And Miscanthus Rhizosphere	RETPETLAAIKELDIQWVNAESVHAGEKLSVRLRATEGGLGVANARLTVRLARDNAAPFYTQLTTDNAGEAELVVIVEESSLATSSVLVQVNSSGRTATRKFQMRHVEA*
Ga0066903_1008165201	3300005764	Tropical Forest Soil	EEVFDRRESPETLAAIPELDIHWLNSDSIHAEDKLFMKLRATEAGRGISGARLTVRLARVNAAPFYTQVTTDDAGEAELVFLIEESLLPESSVLVQVNVEGRTATRKFQLRRVDS*
Ga0080026_101661421	3300005952	Permafrost Soil	FDKRETPESLATEKELDIHWLNADSVHADDKLSMKLRATEAGHPVSGARMTVRFARANADPFYTQVTTDSSGDAELTFLVEESALPEASVLVQVNSAGKTATRKFKLRKVGA*
Ga0070717_119202341	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	VLDAIRDGRLEQVFDRRDTPETLAAIKELDIQLLNAQSIHSGEKLSMKLRATEGGQGIANARLTIRLARANSAPFYMQLTTDQSGEAELEVLVEESALTDSSVLVQVNASGRTATRKFQLKKVGA*
Ga0070717_119462641	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	AIREGRLEEVFDKRETPETLAAIKEIEIQWLNAHSIHSHDKLSMKLRATEGGQGMANARLTVRLARTNADPFYTQTTTDGSGEAELEFQVEEASLHESSILVQVNSDGRTATRKFQLKKIQA*
Ga0066696_100454117	3300006032	Soil	AAEKELDIQWLNSDSVHSEDQLAMKLRATEAGQGIAGARLTVRFARPNADPFYTQVTTDASGDAEILLLVEEASMADASLLVQMNAQGRTATRKFQLRRVGA*
Ga0066656_103848743	3300006034	Soil	FDKRETPETLAAEKELDIQWLNSDSVHSEDQLAMKLRATEAGQGIAGARLTVRFARPNADPFYTQVTTDASGDAEILLLVEEASMADASLLVQMNAQGRTATRKFQLRRVGA*
Ga0070715_106279821	3300006163	Corn, Switchgrass And Miscanthus Rhizosphere	PETLAAIKELDIQLLNAESIHTQEKLCMKLRATEGGQGIDNARLTVRLVRANSAPFYMQLTTDPSGEAELEVMVEESALTDASVLVQVNSSGRTATRKFQLRRVGA*
Ga0070715_108158961	3300006163	Corn, Switchgrass And Miscanthus Rhizosphere	QHRVVLDAIRNGQLEQVFDKRESPETLAAIKELDIQWLNSDSVHSDDKLAMKLQATEDGKGIAAARLTVRFARPNADPFYTQVTTDASGDAELAFEIEESSLPEASLLVQVNVSGRTATRKFQLRRVEG*
Ga0070712_1003748541	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	AIKELDIRLLNAESIHSGEKLSMKLRATEGGQGIANARLTIRLARANSAPFYMQLTTDQSGEAELEVLVEESALTDSSVLVQVNASGRTATRKFQLKKVGA*
Ga0066665_111351721	3300006796	Soil	AIRDGRLEQVFDRRETSETLAAEKELDIQWLNSDSVHSEDKLAMKLRATESGHGIAGVRLTVRFARPNADPFYTQVTTDSSGEAELVLLVEETELPESSLLVQVNSGGRTATRKFQLRRVGAQ*
Ga0066660_106277622	3300006800	Soil	DIQWLNSDSVHSEDKLAMKLRATESGQGIAGARLTVRFARPNADPFYTQVTTDTSGDAELVFLVEETELPESSLLVQVNSGGRTATRKFQLRRVGAQ*
Ga0075436_1002610131	3300006914	Populus Rhizosphere	SLAAEKELDIQWLNSDSVHAQDQLSMRLRATESGQGIAGARLTVRFARPNADPFYTQVSTGDTGEAELALLVEEGLMADASILVQVNAAGRTATRKFQLRRVEA*
Ga0066709_1005422404	3300009137	Grasslands Soil	WLNSDSVHSEDKLAMKLRATESGQGIAGARLIVRFGRPNADPFYTQVTTDNAGDAELVLLVEETELPESSLLVQVNSGGRTATRKFQLKRVAG*
Ga0066709_1030995582	3300009137	Grasslands Soil	ETLAAEKELDIQWLNSDSVHSEDKLAMKLRATESGQGIGGARLTVRFARPKADPFYTQVTTDTSGDAELVFLVEETELPESSLLVQVNSGGRTATRKFQLRRVRVQ*
Ga0105237_114664111	3300009545	Corn Rhizosphere	EGHLQDVFDNRETPETLAAIKQLDIQWLNANSIHAEEKLSVRLRATEDGQGVADARLTVRLARANAAPFYTQLTTDGAGEAELDVLVDEASLADSSVLVQVNSSGRTATRKFQLRRVEA*
Ga0105238_112537853	3300009551	Corn Rhizosphere	AEEQLSMKLRATESGQPVSGARLTVRFARTNAAPFYAQMVTDGAGEAVLVLEVEEGSLSESSVLVQMNAQGRTATRKFQLRRAQS*
Ga0105238_125990032	3300009551	Corn Rhizosphere	AIKQLDIQWLNANSIHSEEKLSVRLRATEDGQSIANARLIVRLARANAAPFYTQLTTNDTGEAELVVLVDESSLADSSVLVQVNSSGRTATRKFQLRRLEA*
Ga0126384_106628433	3300010046	Tropical Forest Soil	VLDAIRDGRLEEVFDRRETPESLAAEKELDIQWLNAASIHSDDKLSMKLRATEAGQGIAGARLTVRFARPNADPFYTQVTTDDSGEAELLFLVEEGELPESSLLVQVNSAGRTATRKFQLRRMEA*
Ga0126382_123265891	3300010047	Tropical Forest Soil	RDGRLEEVFDRRETPESLAAEKELDIQWLNAASIHSDDKLSMKLRATEAGQGIAGARLTVRFARPNADPFYTQVTTDDSGEAELLFLVEEGELPESSLLVQVNSAGRTATRKFQLRRMEA
Ga0126373_111295531	3300010048	Tropical Forest Soil	DSIHHEDKLLMKLRATEGGQGIAGARLTVRLARTNAAPFYSQANTDEAGEAELVFLIEEASLPESSILVQVNSAGRTATRKFQPRRAES*
Ga0126373_114512951	3300010048	Tropical Forest Soil	DAIRNGRLEQVFDKRESPETLAAIKELDIQWLNLQSIHADEKLSMKLRATEGGQGIANARLTVRLARTNGSPCYGQATTNGLGDAELEFQIAESSLHESSLLVQVNAEGRTATRKFQLKRIEA*
Ga0134067_100817771	3300010321	Grasslands Soil	MKLRATESGQPLPGARLTVRLARANAVPFYAQMITDSSGEAVLALAVEEGSLSDSSVLVQMNAQGRTATRKFQLRRVQS*
Ga0126370_104831362	3300010358	Tropical Forest Soil	LEQALINRENSEALAAIKEVEIQWLNSDSIHSDEKLSMRLRATEGGRGIASARLTVRLARVDADPFYAQVETDGSGEAELLFLVDESSLYDSSVLVQVNSEGRTATRKFQLRKLKA*
Ga0126376_121334222	3300010359	Tropical Forest Soil	GRLEQALINRENAEALAAIKEVEIQWLNSDSIHSDEKLSMRLRATEGGQGLASARLTVRLARLHADPFYAQVETDGSGEAELLFLVDESSLYDSSVLVQVNSEGRTATRKFQLKKLKA*
Ga0126378_101078221	3300010361	Tropical Forest Soil	AGRLEQALINRENSEALAAIKEVEIQWLNSDSIHSDEKLSMRLRATEGGRGIASARLTVRLARVHADPFYAQVETDGSGEAELLFLVDESSLYDSSVLVQVNSEGRTATRKFQLRKLKA*
Ga0126378_110113582	3300010361	Tropical Forest Soil	CEEKLSMRLRATEGGQRVASARVTVRLARVNADPFYAQMETDGSGEAQLVFLVDESSLLDSSVLVQVNSEGRTATRKFQLRKLEA*
Ga0134125_103831821	3300010371	Terrestrial Soil	DQQKEQMLREQHRQVLDAIREGRLEEVFDKRENPDALGAIKELDIQWVNSHSIHAEEQLSMKLRATESGQPVPGARLTVRFARTNAAPFYAQMVTDGAGEAVLVLAVEEGSLSESSVLVQMNAQGRTATRKFQLRRAQS*
Ga0134128_119588751	3300010373	Terrestrial Soil	IQWINSHSIHAEEQLSMKLRATESGQPVPGARLTVRFARTNAAPFYAQMITDSGGEAVLVLAVEEGSLSESSVLVQMNAQGRTATRKFQLRRAQS*
Ga0134126_123406832	3300010396	Terrestrial Soil	TPETLAAIKELDVQWINSGSVHSEDKLSLKLRATEDGHGVGGARLTVRLARSNAAPFYTQVTTDGSGEAELVFLIEEASLPDSSILVQVNSEGRTATRKFQMKKVGV*
Ga0126361_106737861	3300010876	Boreal Forest Soil	FTDQQKEQMLREQHRQVLDAIREGRLKEVFDKRDNPEALGAIKELDIQWINSHSIHAEEQLSMKLRATESGQPVPGARLTVRLARANAAPFYAQMISDGSGEAVLVLAVEEGSLSDSSVLVQMNFQGRTATRKFQLRRVQS*
Ga0137383_104722201	3300012199	Vadose Zone Soil	TLAAEKELDIQWLNSDSVHSEDKLAMKLRATESGQGIAGARLTVRFARPNADPFYTQVTTDTSGDAELVFLVEETELPESSLLVQVNSGGRTATRKCQLRRVGV*
Ga0137382_106748231	3300012200	Vadose Zone Soil	SVHSEDKLAMKLRATESGQGIAGARLTVRFARPNADPFYTQVTTDTSGDAELVFLVEETELPESSLLVQVNSGDRTATRKFQLRRVGV*
Ga0137365_112931981	3300012201	Vadose Zone Soil	GRLEQVFDKRETPETLAVEKELDIQWLNSTSVHAEDKLSMKLRATEAGQGIAGARLTVRFARANADPFYTQVTTDMSGDAELEFLVEEASLEDSSVLVQVNSGGRTATRKFQLRRVGA*
Ga0137381_114018712	3300012207	Vadose Zone Soil	AIRDGRLEQVFDKRETPETLAAEKELDIQWLNSESVHSEDKLSMRLRATEAGQGIAGARMTVRFARANADPFYTQVTTDASGDAELVFMVEEAALTEASVLVQVNSGGRTATRKFQLRKV
Ga0137379_105589051	3300012209	Vadose Zone Soil	RDGRLEQVFDKRETPETLAVEKELDIQWLNSTSVHSEDKLSMKLRATEAGQGIAGARLTVRFARANADPFYTQVTTDASGDAELAFLVEEASLQDSSLLVQVNSGGRTATRKFQLRRVGA
Ga0137387_105485271	3300012349	Vadose Zone Soil	RLVLDAIRDGHLEQVFDKRETPETLAAEKELDIQWLNSDSVHAEDSLSMKLRATEAGQGIGGARLTVRFGRANADPFYTQVTTNASGDAELTFPVEEASLPDASLLVQVNSAGKTATRKFQLRKVGA*
Ga0137387_110620851	3300012349	Vadose Zone Soil	DKRETPETLAAEKELDIRWLNADSVHADDKLAMKLRATEAGQGIAGAKMTVRFARPNADPFYTQVTTDASGDADLVFLVEEAALNEASVLVQVNAAGRTATRKFQLRKVDA*
Ga0137386_101931383	3300012351	Vadose Zone Soil	FDKRETPETLAAEKELDIQWLNSESVHAEDKLSMKLRATEAGQGIGGARLTIRFARANADPFYTQVTTNASGEAELTFPVEEASLADSSLLVQVNSAGKTATRKFQLRKVGA*
Ga0137386_109046211	3300012351	Vadose Zone Soil	ILREQHRVVLDAIRDGRLEQVFDKRETPETLAAEKELDIQWLNSESVHSEDKLSMRLRATEAGQGIAGARMTVRFARANADPFYTQVTTDASGDAELVFMVEEAALTEASVLVQVNSGGRTATRKFQLRKV*
Ga0137366_107977081	3300012354	Vadose Zone Soil	KELDIQWLNSTSVHAEDKLSMKLRATEAGQGIAGARLTVRFARANADPFYTQVTTDMSGDAELEFLVEEASLEDSSVLVQVNSGGRTATRKFQLRRVGA*
Ga0137384_105782323	3300012357	Vadose Zone Soil	DIQWLNSDSVHSEDKLAMKLRATESGQGIAGARLTVRFARPKADPFYTQVTTDVSGDAELVFLVEETELPESSLLVQVNSAGRTATRKFQLRRVGA*
Ga0137368_105370772	3300012358	Vadose Zone Soil	ETPETLAVEKELDIQWLNSTSVHGEDKLSMKLRATEAGQGIAGARLTVRFARPNADPFYTQVTTDASGDAELAFLVEEASLLDSSVLVQVNSGGRTATRKFQLRRVTS*
Ga0137395_111072762	3300012917	Vadose Zone Soil	LNSESVHSEDKLSMRLRATEAGQGIAGARMTVRFARANADPFYTQVTTDACGDAELVFMVEEAALTEASVLVQVNSGGRMATRKFQLRKV*
Ga0164303_115443091	3300012957	Soil	RLVLDAIRDGRLEQVFDRRDTPETLAAIKELDIQLLNAGSIHTQEKLCMKLRATEGGQGIDNARLTVRLVRANSAPFYMQLTTDPSGEAELEVMVEESALTDASVLVQVNSSGRTATRKFQLRRVGA*
Ga0164306_109357313	3300012988	Soil	RETPESLAAEKELDIQWLNAESVHSADQLSIRLRATEAGQGIAGARLTVRFARPDADPFYTQVTTGDTGEADLALVVEETLMADASILVQVNAAGRTATRKFQLRRVEA*
Ga0157370_100563231	3300013104	Corn Rhizosphere	ANSIHSEEKLSVRLRATEDGQGVSNARLTVRLARANAAPFYTQLTTNDTGEAELVVLVDEASLSDSSVLVQVNSSGRTATRKFQLRRVEA*
Ga0157372_101400531	3300013307	Corn Rhizosphere	IEEVFDKRENPDALGAIKELDIQWVNSHSIHAEEQLSMKLRATESGQPVSGARLTVRFARTNAAPFYAQMVTDGAGEAVLVLEVEEGSLSESSVLVQMNAQGRTATRKFHLRRAQS*
Ga0157372_109056041	3300013307	Corn Rhizosphere	LDIHWTNADSIHSEDRLSMRLRATEGGQAVGHARLTVRLAREGAAPFYTQTETDSAGQAELDFIIEESSMKDSSVMVQVNVNGRTATRKFQLKRVEA*
Ga0134078_102620321	3300014157	Grasslands Soil	KELDIQWLNSDSVHAQDKLAMKLRASEDGKGIAGARLTVRFARPNADPFYTQLMTDGSGDAELVFEVGEDQLPEASLLVQVNNSGKTATRKFQLRRVEG*
Ga0157376_120531931	3300014969	Miscanthus Rhizosphere	KELDIQLLNAESIHAGEKLSMKLRATEGGQAIANSRLTIRLARAKADPFYMQLTTDQSGEAELEVLVEESALTDSSVLVQVNSAGRTATRKFQFKRAEAR*
Ga0132256_1014725682	3300015372	Arabidopsis Rhizosphere	SVHAGEKLSIRLRATEDGQGVPNARLTVRLARANAAPFYTQLTTDSAGESELVVLVDESSLTDSSVLVQVNSSGRTATRKFQMRRVEA*
Ga0132256_1031413961	3300015372	Arabidopsis Rhizosphere	EVLAAIKELDIQLLNAESIHAGEKLSMKLRATEGGQAIANSRLTIRLARAKADPFYMQLTTDQSGEAELEVLVEESALTDSSVLVQVNSAGRTATRKFQFKRAEAR*
Ga0182032_119337182	3300016357	Soil	WLNSDSIHAEDKLFMKLRATEAGRGISGARLTVRLARVNAAPFYTQVTTDDAGEAELVFLIEESLLPESSVLVQVNVEGRTATRKFQLRRVDS
Ga0187825_103633351	3300017930	Freshwater Sediment	WLNANSIHAEEKLSVRLRATEDGQGLANARLIVRLARANAAPFYTQLMTDHAGEAELVVLVDEASLADSSVLVQVNSSGRTATRKFHLRKVEA
Ga0066662_108893282	3300018468	Grasslands Soil	VLDAIRDGRLDTVLDSQATPETLGAIKELDVQWLNSDSILSEEKLSLRLRATEAGQAVANARLTVRLVRANAVPFYTQLSTDGAGEAELVVLVQESSLADCSVLVQVNSSGRTATRKFQLRRIEG
Ga0066669_107238683	3300018482	Grasslands Soil	DSVHSEDQLAMKLRATEAGQGIAGARLTVRFARANADPFYTQVTTDASGDAEILLLVEETSMAEASLLVQMNAAGRTATRKFQLRRVGA
Ga0066669_115505841	3300018482	Grasslands Soil	IQWINSHSIHAEEQLSMKLRATESGQPLPGARLTVRLARANAVPFYAQMITDSSGEAVLALAVEEGSLSDSSVLVQMNAQGRTATRKFQLRRVQSSLRSGSRCRRFSSP
Ga0173482_101291152	3300019361	Soil	VLEAIREGRLQEVFDNRDTPETLATIKELDIQWVNAESVHAGEKLSVRLRATEGGLGIANARLTVRLARTNAAPFYTQLTTDNLGEAELVVIVEESSLADSSVLVQVNSSGRTATRKFQMRRVEA
Ga0193749_10029336	3300020010	Soil	QWLNSDSVHSEDQLAMKLRATEAGQGIAGARLTVRFARPNADPFYTQVTTDASGDAEILLLVEEASMADASLLVQMNAQGRTATRKFQLRRVGA
Ga0193721_10712312	3300020018	Soil	MLNRPRARDLQLEQVFDKRDTPESLAAIKELDIQWLNSDSVHAYDKLAMKLRASEDGKGIAGARLTVRFARPNADPFYTQVMTDASGDAELVFEIGEDQLPQASLLVQVNNSGRTATRKFQLRRVER
Ga0213874_100306585	3300021377	Plant Roots	DEDKLSMKLRATEGGRPLAGARLTVRLTSGNAAPSYSQVDTDEGGVAELAFIVDEASLSASSILVQVNSQGRTATRKFQPQRAES
Ga0210384_116460461	3300021432	Soil	VHAEDKLSMKLRATEAGQPVSGVKMTVRFARANADPFYTQVTTDGSGDAELTFLVEEAALPEASVLVQVNSAGKTATRKFKLRKVGA
Ga0207642_107029451	3300025899	Miscanthus Rhizosphere	EVFDNRDTPETLATIKELDIQWVNAESVHAGEKLSVRLRATEGGLGIANARLTVRLARTNAAPFYTQLTTDNLGEAELVVIVEESSLADSSVLVQVNSSGRTATRKFQMRRVEA
Ga0207647_105815981	3300025904	Corn Rhizosphere	TPETLAAIKELDIQWVNAESVHAGEKLSVRLRATEGGLGVANARLTVRLARDNAAPFYTQLTTDNAGEAELVVIVEESSLATSSVLVQVNSSGRTATRKFQMRHVEA
Ga0207699_100719621	3300025906	Corn, Switchgrass And Miscanthus Rhizosphere	GRLEQVFDKRDTPESLASIKELEIHWLNSQSIHSDEKLSMKLQATEGGQGIAKARLTIRLSRTNAAPFYTQTTTESSGEAEIAVPIEESALADSSILVQVNVEGRTATRKFQLKRVEG
Ga0207699_106406732	3300025906	Corn, Switchgrass And Miscanthus Rhizosphere	KQLDIQWVNANSIHAEEKLSVRLRATEDGQGLANARLIVRLARSNAAPFYTQLTTNDTGEAELVVLVDEASLADSSVLVQVNSSGRTATRKFQLRRLEA
Ga0207684_116906171	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	GRLEQVFDKRETPETLAAEKELDIQWLNSESVHAEDKLSMKLHATEAGQGIAGARLTVRFARANADPFYTQVTTDASGDAELVFMVEEASMSDSSVLVQVNSAGRTATRKFQLRKVGA
Ga0207654_100566011	3300025911	Corn Rhizosphere	TIKELDIQWVNAESVHAGEKLSVRLRATEGGLGIANARLTVRLARTNAAPFYTQLTTDNLGEAELVVIVEESSLADSSVLVQVNSSGRTATRKFQMRRVEA
Ga0207671_104775611	3300025914	Corn Rhizosphere	EVFDNRETPETLAAIKQLDIQWLNANSIHSEEKLSVRLRATEDGQGVSNARLTVRLARANAAPFYTQLTTNDTGEAELVVLVDEASLSDSSVLVQVNSSGRTATRKFQLRRVEA
Ga0207700_116439772	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	HAGEKLSVRLRATEGGLGVANARLTVRLARDNAAPFYTQLTTDNAGEAELVVIVEESSLATSSVLVQVNSSGRTATRKFQMRHVEA
Ga0207664_103031594	3300025929	Agricultural Soil	HAEEQLSMKLRATESGQPVPGARLTVRFARINAAPFYAQMITDGAGEAVLVLAVEEGSLSESSVLVQMNAQGRTATRKFQLRRAHT
Ga0207664_103454711	3300025929	Agricultural Soil	RLEQVFDRRETPEALAAIKELDIQLLNAESIHSGEKLSMKLRATEGGQGIANARLTIRLARSKADPFYMQLATDQSGEAELEVLVEESALTDSSVLVQVNSAGRTATRKFQFRRTETR
Ga0207667_108211343	3300025949	Corn Rhizosphere	VLDAIREGKIEEVFDKRENPDALGAIKELDIQWVNSHSIHAEEQLSMKLRATESGQPVSGARLTVRFARTNAAPFYAQMVTDGAGEAVLVLEVEEGSLSESSVLVQMNAQGRTATRKFHLRRAQS
Ga0207702_102654244	3300026078	Corn Rhizosphere	ETLAAIKQLDIQWLNANSIHSEEKLSVRLRATEDGQSIANARLIVRLARANAAPFYTQLTTNDTGEAELVVLVDESSLADSSVLVQVNSSGRTATRKFQLRRLEA
Ga0207648_102348531	3300026089	Miscanthus Rhizosphere	GRLQEVFDNRETPETLAAIKELDIQWVNAESVHAGEKLSVRLRATEGGLGVANARLTVRLARDNAAPFYTQLTTDNAGEAELVVIVEESSLATSSVLVQVNSSGRTATRKFQMRHVEA
Ga0207676_101319294	3300026095	Switchgrass Rhizosphere	LQEVLDNRDTPETLATIKELDIQWVNAESVHAGEKLSVRLRATEGGLGIANARLTVRLARTNAAPFYTQLTTDNLGEAELVVIVEESSLADSSVLVQVNSSGRTATRKFQMRRVEA
Ga0207698_108423892	3300026142	Corn Rhizosphere	GRLQEVFDNRETPETLAAIKQLDIQWLNANSIHSEEKLSVRLGATEDGQGVSNARLTVRLARANAAPFYTQLTTNDTGEAELVVLVDEASLSDSSVLVQVNSSGRTATRKFQLRRVEA
Ga0209890_101377731	3300026291	Soil	LRDQHRLVLDAIRDGLLEHVFDKRETPESLATEKELDIHWLNADSVHADDKLSMKLRATEAGHPVSGARMTVRFARANADPFYTQVTTDSSGDAELTFLVEESALPEASVLVQVNSAGKTATRKFKLRKVGA
Ga0209473_10172731	3300026330	Soil	SLAAIKELDIQWLNSDSVHAQDKLAMKLRASEDGKGIAGARLTVRFARPNADPFYTQLMTDASGDAELVFEVGEDQLPEASLLVQVNNSGKTATRKFQLRRVEG
Ga0209059_10919394	3300026527	Soil	VLDAIRDGRLEQVFDKRETPETLAAEKELDIQWLNSDSVHSEDQLAMKLRATEAGQGIAGARLTVRFARPNADPFYTQVTTDASGDAEILLLVEEASMADASLLVQMNAQGRTATRKFQLRRVGA
Ga0209421_10252173	3300027432	Forest Soil	RLVLDAIRDGILPHVLDKRETPESLAAVKELDIVWLNADSVHADDKLAMKLRASESGQGIAGAKMTVRFARPNADPFYTQVTTDGSGEAELTFLVEEAALPEASVLVQVNNAGKTATRKFKLRKVGA
Ga0209166_106382721	3300027857	Surface Soil	SLSAIKELDIQWVNSHSIHAEEQLSMKLRATESGQPVSGARLTVRFARTNAAPFYAQMVTDAAGEAVLVLAVEEGSLSESSVLVQMSAQGRTATRKFQLRRAQS
Ga0137415_108539483	3300028536	Vadose Zone Soil	WLNAESIHIEDKLSMKLRATEAGQGIAGARMTVRFARPNADPFYTQVTTDASGDAELVFLVEEAALPEASVLVQMNSAGRTATRKFQLRKVGA
Ga0170834_1053531931	3300031057	Forest Soil	RVVLDAIRNGQLEHVFDKRESPETLAAIKELDIHWLNSASVHSGDKLAMKLRATEDGKGIAAARLTVRFARPNSAPFYTQVITDASGNADLAFEVEEDALPDASLLVQVNLSGRTATRKFQLRRVEG
Ga0310813_105299663	3300031716	Soil	KELEIHWLNSQSIHSDEKLSMKLQATEGGQGIAKARLTIRLSRTNAAPFYTQTTTESSGEAEIAVPIEESALADSSILVQVNVEGRTATRKFQLKRVEG
Ga0310813_110986052	3300031716	Soil	RLVLEAIREGRLEEVFDNRDTPETLAAIKQLDIQWLNANSIHSEEKLSVRLRATEDGQSIANARLIVRLARANAAPFYTQLTTNDTGEAELVVLVDESSLADSSVLVQVNSSGRTATRKFQLRRLEA
Ga0307475_102285851	3300031754	Hardwood Forest Soil	VHAGDQLSMKLRATEAGQAVPGARLTIRLARPNAAPFYAQMVTDGAGEAVLVLAVEEWSLSDSSVLVQVNSHGTTATRKFQLRPVQS
Ga0306923_108192341	3300031910	Soil	DGRLEEVFDRRESPETLAAIPELDIHWLNSDSIHAEDKLFMKLRATEAGRGISGARLTVRLARVNAAPFYTQVTTDDAGEAELVFLIEESLLPESSVLVQVNVEGRTATRKFQLRRVDS
Ga0335081_101566367	3300032892	Soil	HWVNSHSIHSEDRLSMKLRAIEAGQAVTGARLTVRLARTDAAPFYTQVTTDGAGEAELVFLVEEASLPESSILVQVNSEGRTATRKFQLKRVGV
Ga0310811_114788511	3300033475	Soil	KELDIHWVNAESVLAGEKLAVKLRATEGGIGVANARLTVRLARDNAAPFYTQLTTDSAGEAELVVIVEESSLATSSVLVQVNSSGRTATRKFQMRHVEA

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F075363

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Structural matches with SCOPe domains

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences