NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome / Metatranscriptome Family F075357

Metagenome / Metatranscriptome Family F075357

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F075357
Family Type Metagenome / Metatranscriptome
Number of Sequences 119
Average Sequence Length 65 residues
Representative Sequence RAADDFATIRARMEELRRERAPAPKKESRDPEAAASGGRSLLKASENRQRLENERWSTGSSSRRYGSGR
Number of Associated Samples 96
Number of Associated Scaffolds 119

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 36.13 %
% of genes near scaffold ends (potentially truncated) 32.77 %
% of genes from short scaffolds (< 2000 bps) 89.92 %
Associated GOLD sequencing projects 89
AlphaFold2 3D model prediction Yes
3D model pTM-score0.31

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Bacteria (76.471 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil
(25.210 % of family members)
Environment Ontology (ENVO) Unclassified
(31.092 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(67.227 % of family members)



 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      


 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Mixed Signal Peptide: No Secondary Structure distribution: α-helix: 38.14%    β-sheet: 0.00%    Coil/Unstructured: 61.86%
Feature Viewer
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.31
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 119 Family Scaffolds
PF13714PEP_mutase 10.92
PF00005ABC_tran 10.08
PF00440TetR_N 8.40
PF08359TetR_C_4 5.04
PF00528BPD_transp_1 3.36
PF12399BCA_ABC_TP_C 1.68
PF01663Phosphodiest 0.84
PF12849PBP_like_2 0.84
PF03576Peptidase_S58 0.84
PF00561Abhydrolase_1 0.84

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 119 Family Scaffolds
COG1309DNA-binding protein, AcrR family, includes nucleoid occlusion protein SlmATranscription [K] 5.04
COG3191L-aminopeptidase/D-esteraseAmino acid transport and metabolism [E] 1.68


 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms76.47 %
UnclassifiedrootN/A23.53 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300003505|JGIcombinedJ51221_10073294All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae1338Open in IMG/M
3300003505|JGIcombinedJ51221_10298236All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 65-37656Open in IMG/M
3300004092|Ga0062389_101745818All Organisms → cellular organisms → Bacteria803Open in IMG/M
3300004268|Ga0066398_10071568All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium750Open in IMG/M
3300004631|Ga0058899_12267341All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium601Open in IMG/M
3300004633|Ga0066395_10787508All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium570Open in IMG/M
3300005184|Ga0066671_10630978All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium696Open in IMG/M
3300005363|Ga0008090_15710169All Organisms → cellular organisms → Bacteria → Proteobacteria591Open in IMG/M
3300005434|Ga0070709_10307027Not Available1160Open in IMG/M
3300005434|Ga0070709_10314931All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales1147Open in IMG/M
3300005435|Ga0070714_102059769Not Available556Open in IMG/M
3300005436|Ga0070713_100404969All Organisms → cellular organisms → Bacteria1275Open in IMG/M
3300005437|Ga0070710_10074194All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1969Open in IMG/M
3300005439|Ga0070711_100321258All Organisms → cellular organisms → Bacteria1237Open in IMG/M
3300005439|Ga0070711_101204907All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium655Open in IMG/M
3300005560|Ga0066670_10139828All Organisms → cellular organisms → Bacteria → Proteobacteria1403Open in IMG/M
3300005569|Ga0066705_10016611All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria3688Open in IMG/M
3300005602|Ga0070762_10754817All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium656Open in IMG/M
3300005610|Ga0070763_10638624All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 65-37620Open in IMG/M
3300005764|Ga0066903_108899830Not Available509Open in IMG/M
3300005921|Ga0070766_10178925All Organisms → cellular organisms → Bacteria1315Open in IMG/M
3300005983|Ga0081540_1033382All Organisms → cellular organisms → Bacteria2796Open in IMG/M
3300006163|Ga0070715_10938358All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium535Open in IMG/M
3300006175|Ga0070712_100062974All Organisms → cellular organisms → Bacteria2624Open in IMG/M
3300006806|Ga0079220_10185938All Organisms → cellular organisms → Bacteria1184Open in IMG/M
3300009137|Ga0066709_103579245All Organisms → cellular organisms → Bacteria → Proteobacteria564Open in IMG/M
3300009792|Ga0126374_11872848All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium504Open in IMG/M
3300010043|Ga0126380_11150657Not Available665Open in IMG/M
3300010046|Ga0126384_10028138All Organisms → cellular organisms → Bacteria → Proteobacteria3706Open in IMG/M
3300010047|Ga0126382_10481352All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium992Open in IMG/M
3300010361|Ga0126378_10100185All Organisms → cellular organisms → Bacteria2857Open in IMG/M
3300010366|Ga0126379_10820353All Organisms → cellular organisms → Bacteria → Proteobacteria1030Open in IMG/M
3300010376|Ga0126381_100096042All Organisms → cellular organisms → Bacteria → Proteobacteria3771Open in IMG/M
3300010376|Ga0126381_103451872All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium621Open in IMG/M
3300011120|Ga0150983_10716393All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium524Open in IMG/M
3300011120|Ga0150983_11541711All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium584Open in IMG/M
3300011120|Ga0150983_11647093All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium553Open in IMG/M
3300011120|Ga0150983_15630696All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria743Open in IMG/M
3300012205|Ga0137362_10406681All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium1179Open in IMG/M
3300012212|Ga0150985_110351180All Organisms → cellular organisms → Bacteria → Proteobacteria889Open in IMG/M
3300012212|Ga0150985_112683696Not Available604Open in IMG/M
3300012361|Ga0137360_10205818All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales1595Open in IMG/M
3300012469|Ga0150984_118497714All Organisms → cellular organisms → Bacteria1616Open in IMG/M
3300012469|Ga0150984_121305425All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei688Open in IMG/M
3300012917|Ga0137395_10856659All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium658Open in IMG/M
3300012971|Ga0126369_13223139All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium534Open in IMG/M
3300015371|Ga0132258_10798086All Organisms → cellular organisms → Bacteria2380Open in IMG/M
3300016294|Ga0182041_11095001Not Available723Open in IMG/M
3300016422|Ga0182039_11496963All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium614Open in IMG/M
3300018468|Ga0066662_10290247All Organisms → cellular organisms → Bacteria → Proteobacteria1366Open in IMG/M
3300020199|Ga0179592_10358961All Organisms → cellular organisms → Bacteria → Proteobacteria641Open in IMG/M
3300020579|Ga0210407_10751329Not Available754Open in IMG/M
3300020580|Ga0210403_10039442All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei3776Open in IMG/M
3300020583|Ga0210401_10214097All Organisms → cellular organisms → Bacteria1784Open in IMG/M
3300020583|Ga0210401_10570874Not Available993Open in IMG/M
3300021168|Ga0210406_10236561All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1503Open in IMG/M
3300021180|Ga0210396_10788532All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales816Open in IMG/M
3300021372|Ga0213877_10149265Not Available738Open in IMG/M
3300021403|Ga0210397_10615827Not Available830Open in IMG/M
3300021405|Ga0210387_10730989Not Available876Open in IMG/M
3300021406|Ga0210386_11527305Not Available556Open in IMG/M
3300021407|Ga0210383_10576446All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria970Open in IMG/M
3300021479|Ga0210410_10922652All Organisms → cellular organisms → Bacteria → Proteobacteria761Open in IMG/M
3300021479|Ga0210410_11346876Not Available606Open in IMG/M
3300021560|Ga0126371_10070892All Organisms → cellular organisms → Bacteria → Proteobacteria3390Open in IMG/M
3300021560|Ga0126371_13662789All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium518Open in IMG/M
3300022503|Ga0242650_1019359All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium562Open in IMG/M
3300022512|Ga0242676_1041664Not Available550Open in IMG/M
3300022528|Ga0242669_1068338Not Available639Open in IMG/M
3300022531|Ga0242660_1026632All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1135Open in IMG/M
3300022531|Ga0242660_1182114Not Available568Open in IMG/M
3300022533|Ga0242662_10043481All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae1134Open in IMG/M
3300022557|Ga0212123_10725925All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium608Open in IMG/M
3300022712|Ga0242653_1068886Not Available605Open in IMG/M
3300022715|Ga0242678_1050060Not Available602Open in IMG/M
3300022715|Ga0242678_1060408All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium568Open in IMG/M
3300022717|Ga0242661_1032201All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales909Open in IMG/M
3300022717|Ga0242661_1096487Not Available613Open in IMG/M
3300022724|Ga0242665_10253215All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium600Open in IMG/M
3300025898|Ga0207692_10951177Not Available566Open in IMG/M
3300025916|Ga0207663_10846081All Organisms → cellular organisms → Bacteria730Open in IMG/M
3300025916|Ga0207663_11058176All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium652Open in IMG/M
3300025916|Ga0207663_11626947All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium520Open in IMG/M
3300025928|Ga0207700_10382915Not Available1230Open in IMG/M
3300026489|Ga0257160_1012805All Organisms → cellular organisms → Bacteria1233Open in IMG/M
3300026551|Ga0209648_10140010All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales1925Open in IMG/M
3300026557|Ga0179587_10762957All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium637Open in IMG/M
3300026999|Ga0207949_1001325All Organisms → cellular organisms → Bacteria2014Open in IMG/M
3300027172|Ga0208098_1013641All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium766Open in IMG/M
3300027775|Ga0209177_10312818All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium602Open in IMG/M
3300027783|Ga0209448_10076296All Organisms → cellular organisms → Bacteria1125Open in IMG/M
3300027795|Ga0209139_10069738Not Available1233Open in IMG/M
3300027812|Ga0209656_10173703All Organisms → cellular organisms → Bacteria1062Open in IMG/M
3300027855|Ga0209693_10444428All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 65-37624Open in IMG/M
3300027884|Ga0209275_10349873All Organisms → cellular organisms → Bacteria828Open in IMG/M
3300029636|Ga0222749_10542426Not Available632Open in IMG/M
3300030905|Ga0308200_1100464All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium615Open in IMG/M
3300031058|Ga0308189_10299393Not Available628Open in IMG/M
3300031096|Ga0308193_1084766All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium525Open in IMG/M
3300031122|Ga0170822_12507145All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium547Open in IMG/M
3300031231|Ga0170824_103516133Not Available653Open in IMG/M
3300031231|Ga0170824_111047046All Organisms → cellular organisms → Bacteria2919Open in IMG/M
3300031469|Ga0170819_13444744All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium578Open in IMG/M
3300031753|Ga0307477_10494295All Organisms → cellular organisms → Bacteria832Open in IMG/M
3300031781|Ga0318547_10138120Not Available1426Open in IMG/M
3300031795|Ga0318557_10219591All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium869Open in IMG/M
3300031879|Ga0306919_10526499All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales912Open in IMG/M
3300031879|Ga0306919_10564536All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium878Open in IMG/M
3300031879|Ga0306919_10941986All Organisms → cellular organisms → Bacteria → Proteobacteria661Open in IMG/M
3300031879|Ga0306919_11330999All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium543Open in IMG/M
3300031879|Ga0306919_11363457All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium536Open in IMG/M
3300031910|Ga0306923_10511366All Organisms → cellular organisms → Bacteria1357Open in IMG/M
3300031910|Ga0306923_12300078All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium537Open in IMG/M
3300031912|Ga0306921_11050116All Organisms → cellular organisms → Bacteria916Open in IMG/M
3300032001|Ga0306922_10173022All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales2314Open in IMG/M
3300032059|Ga0318533_10389177All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales1017Open in IMG/M
3300032076|Ga0306924_10340078Not Available1721Open in IMG/M
3300032261|Ga0306920_103973599All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei537Open in IMG/M
3300033289|Ga0310914_11862587Not Available506Open in IMG/M



 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil25.21%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil10.92%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere10.92%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil9.24%
Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil7.56%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil4.20%
SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Soil4.20%
Bog Forest SoilEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil3.36%
Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil3.36%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil2.52%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil2.52%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil2.52%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil2.52%
Agricultural SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil1.68%
Avena Fatua RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere1.68%
Avena Fatua RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere1.68%
Iron-Sulfur Acid SpringEnvironmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring0.84%
Bulk SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Bulk Soil0.84%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil0.84%
Agricultural SoilEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil0.84%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere0.84%
Tabebuia Heterophylla RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere0.84%
Tropical Rainforest SoilEnvironmental → Terrestrial → Soil → Unclassified → Tropical Rainforest → Tropical Rainforest Soil0.84%

Visualization
Powered by ApexCharts



Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300003505Forest soil microbial communities from Harvard Forest LTER, USA - Combined assembly of forest soil metaG samples (ASSEMBLY_DATE=20140924)EnvironmentalOpen in IMG/M
3300004092Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3EnvironmentalOpen in IMG/M
3300004268Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 MoBioEnvironmentalOpen in IMG/M
3300004631Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF234 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300004633Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBioEnvironmentalOpen in IMG/M
3300005184Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_120EnvironmentalOpen in IMG/M
3300005363Tropical rainforest soil microbial communities from the Amazon Forest, Brazil, analyzing deforestation - Metatranscriptome F II A100 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300005434Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaGEnvironmentalOpen in IMG/M
3300005435Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaGEnvironmentalOpen in IMG/M
3300005436Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaGEnvironmentalOpen in IMG/M
3300005437Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaGEnvironmentalOpen in IMG/M
3300005439Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaGEnvironmentalOpen in IMG/M
3300005560Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_119EnvironmentalOpen in IMG/M
3300005569Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_154EnvironmentalOpen in IMG/M
3300005602Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2EnvironmentalOpen in IMG/M
3300005610Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3EnvironmentalOpen in IMG/M
3300005764Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)EnvironmentalOpen in IMG/M
3300005921Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6EnvironmentalOpen in IMG/M
3300005983Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1Host-AssociatedOpen in IMG/M
3300006163Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaGEnvironmentalOpen in IMG/M
3300006175Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaGEnvironmentalOpen in IMG/M
3300006806Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100EnvironmentalOpen in IMG/M
3300009137Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158EnvironmentalOpen in IMG/M
3300009792Tropical forest soil microbial communities from Panama - MetaG Plot_12EnvironmentalOpen in IMG/M
3300010043Tropical forest soil microbial communities from Panama - MetaG Plot_26EnvironmentalOpen in IMG/M
3300010046Tropical forest soil microbial communities from Panama - MetaG Plot_36EnvironmentalOpen in IMG/M
3300010047Tropical forest soil microbial communities from Panama - MetaG Plot_30EnvironmentalOpen in IMG/M
3300010361Tropical forest soil microbial communities from Panama - MetaG Plot_23EnvironmentalOpen in IMG/M
3300010366Tropical forest soil microbial communities from Panama - MetaG Plot_24EnvironmentalOpen in IMG/M
3300010376Tropical forest soil microbial communities from Panama - MetaG Plot_28EnvironmentalOpen in IMG/M
3300011120Combined assembly of Microbial Forest Soil metaTEnvironmentalOpen in IMG/M
3300012205Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaGEnvironmentalOpen in IMG/M
3300012212Combined assembly of Hopland grassland soilHost-AssociatedOpen in IMG/M
3300012361Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaGEnvironmentalOpen in IMG/M
3300012469Combined assembly of Soil carbon rhizosphereHost-AssociatedOpen in IMG/M
3300012917Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaGEnvironmentalOpen in IMG/M
3300012971Tropical forest soil microbial communities from Panama - MetaG Plot_1EnvironmentalOpen in IMG/M
3300015371Combined assembly of cpr5 and col0 rhizosphere and soilHost-AssociatedOpen in IMG/M
3300016294Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178EnvironmentalOpen in IMG/M
3300016422Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111EnvironmentalOpen in IMG/M
3300018468Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111EnvironmentalOpen in IMG/M
3300020199Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300020579Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-MEnvironmentalOpen in IMG/M
3300020580Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-MEnvironmentalOpen in IMG/M
3300020583Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-MEnvironmentalOpen in IMG/M
3300021168Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-MEnvironmentalOpen in IMG/M
3300021180Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-OEnvironmentalOpen in IMG/M
3300021372Vellozia epidendroides bulk soil microbial communities from rupestrian grasslands, the National Park of Serra do Cipo, Brazil - BS_R01EnvironmentalOpen in IMG/M
3300021403Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-OEnvironmentalOpen in IMG/M
3300021405Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-OEnvironmentalOpen in IMG/M
3300021406Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-OEnvironmentalOpen in IMG/M
3300021407Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-OEnvironmentalOpen in IMG/M
3300021479Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-MEnvironmentalOpen in IMG/M
3300021560Tropical forest soil microbial communities from Panama - MetaG Plot_4EnvironmentalOpen in IMG/M
3300022503Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-2-O (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300022512Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-O (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300022528Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300022531Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-28-M (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300022533Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-7-M (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300022557Paint Pots_combined assemblyEnvironmentalOpen in IMG/M
3300022712Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-32-M (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300022715Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-O (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300022717Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-11-M (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300022724Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-17-M (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300025898Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025916Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025928Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300026489Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NL-11-AEnvironmentalOpen in IMG/M
3300026551Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm (SPAdes)EnvironmentalOpen in IMG/M
3300026557Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungalEnvironmentalOpen in IMG/M
3300026999Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF044 (SPAdes)EnvironmentalOpen in IMG/M
3300027172Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF038 (SPAdes)EnvironmentalOpen in IMG/M
3300027775Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control (SPAdes)EnvironmentalOpen in IMG/M
3300027783Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP14_OM2 (SPAdes)EnvironmentalOpen in IMG/M
3300027795Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP14_OM3 (SPAdes)EnvironmentalOpen in IMG/M
3300027812Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM2 (SPAdes)EnvironmentalOpen in IMG/M
3300027855Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3 (SPAdes)EnvironmentalOpen in IMG/M
3300027884Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2 (SPAdes)EnvironmentalOpen in IMG/M
3300029636Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300030905Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_204 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300031058Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_184 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300031096Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_194 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300031122Oak Spring Coassembly Site 11 - Champenoux / Amance forestEnvironmentalOpen in IMG/M
3300031231Coassembly Site 11 (all samples) - Champenoux / Amance forestEnvironmentalOpen in IMG/M
3300031469Fir Spring Coassembly Site 11 - Champenoux / Amance forestEnvironmentalOpen in IMG/M
3300031753Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_515EnvironmentalOpen in IMG/M
3300031781Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f20EnvironmentalOpen in IMG/M
3300031795Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f19EnvironmentalOpen in IMG/M
3300031879Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)EnvironmentalOpen in IMG/M
3300031910Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)EnvironmentalOpen in IMG/M
3300031912Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)EnvironmentalOpen in IMG/M
3300032001Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)EnvironmentalOpen in IMG/M
3300032059Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27EnvironmentalOpen in IMG/M
3300032076Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)EnvironmentalOpen in IMG/M
3300032261Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)EnvironmentalOpen in IMG/M
3300033289Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108EnvironmentalOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap



 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
JGIcombinedJ51221_1007329423300003505Forest SoilMEELRRERAPAPKKESRDPDPAASGGRSLLKASDSRQRLENERWSTGASTRRYGSGR*
JGIcombinedJ51221_1029823613300003505Forest SoilMEELRRERAPAPRKESRDPEAAASGGRSLLKVSENRQRLENERWSTG
Ga0062389_10174581823300004092Bog Forest SoilVTRPRAADDFATIRARMEELRRERAPAPKKESGEAVSSGGRSLLKAGESRHRLENERWSTGSSSRRYGSGH*
Ga0066398_1007156823300004268Tropical Forest SoilVTRPRVADDFAAIRARMEELRREREPTAKKDERDLEGGGRSLMKAGEARQRLENERWSAGPSSRRYGSGH*
Ga0058899_1226734113300004631Forest SoilASPRLGQARGGDVTRPRAADDFATIRARMEELRRERAPAPRKESRDPEAAASGGRSLLKVSENRQRLENERWSTGSSNRRYGSGR*
Ga0066395_1078750813300004633Tropical Forest SoilMEELRREREPARQNDNRDADPGVSGGRNLFRSIEGRQRSEGERWSAGPSSRRYGSGR*
Ga0066671_1063097813300005184SoilVTRPRAADDFATIRARMEELRRERAPAPKKGDGDPDLGPPGGRSLLKAGESRQRLESERWSTGSSSRRYGSGR*
Ga0008090_1571016913300005363Tropical Rainforest SoilMEELRREREPARQNDSRDADPGVSGGRNLFRSMEARQRSEGERWSAGPSSRRYGSGR*
Ga0070709_1030702723300005434Corn, Switchgrass And Miscanthus RhizosphereVTKLRAADDFATIRARLEELRRERARTFGKESRDPDETLLGDRGLLKGTEGRQRLENERGAPSSSSRRYGSGR*
Ga0070709_1031493113300005434Corn, Switchgrass And Miscanthus RhizosphereMRLGQARGGDVTRPRAADDFATIRARMEELRRERAPDPKKENRDPEAASGARSLLKAGESRQRLETERWSTGASTRRYGSGR*
Ga0070714_10205976913300005435Agricultural SoilVTKLRAADDFATIRARLEELRRERARTFGKESRDPDETLLGDRGLLKGTEGRQRLENERGASASSTRRYGSGR*
Ga0070713_10040496923300005436Corn, Switchgrass And Miscanthus RhizosphereMRLGQARGGDVTRPRAADDFATIRARMEELRRERAPDPKKENRDPEAASGARSLLKAGENRQRLETERWSTGASTRRYGSGR*
Ga0070710_1007419443300005437Corn, Switchgrass And Miscanthus RhizosphereLRRERATAPKKESRDPEVAASGGRSLLKASENRQRLENERWSTGSSSRRYGSGR*
Ga0070711_10032125823300005439Corn, Switchgrass And Miscanthus RhizosphereVTRPRAADDFATIRARMEELRREREPAVQKEDRDPEGGGRSLMKAGDARQRLENERWSSGPSSRRYGSGR*
Ga0070711_10120490723300005439Corn, Switchgrass And Miscanthus RhizosphereVTRPRAADDFATIRARMEELRRERAADPKKENRDPEAASGARSLLKAGESRQRLETERWSTGASTRRYGSGR*
Ga0066670_1013982833300005560SoilMEELRRERAPAPKKESRDPDAAASGGRSLLKAGDGRPRLENERWSTGSSSRRYGSGH*
Ga0066705_1001661113300005569SoilTIRARMEELRRERAPAPKKESRDPDAAASGGRSLLKAGDGRPRLENERWSTGSSSRRYGSGH*
Ga0070762_1075481723300005602SoilVTRPRAADDFATIRARMEELRRERAPAPRKESRDPEAAASGGRSLLKVSENRQRLENERWSTGSSTRRYGSGR*
Ga0070763_1063862423300005610SoilVTRPRAADDFATIRARMEELRRERAPAPRKESRDPEAAASGGRSLLKVSENRQRLENERW
Ga0066903_10889983013300005764Tropical Forest SoilIRARMEELRRERAQHSKKDARDPEEATSGNRSLLKASEARQRLDPDRWPAGSAGRRYGSGR*
Ga0070766_1017892523300005921SoilVTRPRAADDFATIRARMEELRRERAPAPRKESRDPEAAASGGRSLLKVSENRQRLENERWSTGSSNRRYGSGR*
Ga0081540_103338213300005983Tabebuia Heterophylla RhizosphereVARPRAADDFATIRARMEELRRERAQISTKDPRDTGENGSGGRSLLRATEVRQRLEQERGPAGSSARRYGSGR*
Ga0070715_1093835823300006163Corn, Switchgrass And Miscanthus RhizosphereVTRPRAADDFATIRARMEELRRERAPAPKDPEAATSGGRSLLKASDSRQRLESERWSTGASTRRYGSGR*
Ga0070712_10006297423300006175Corn, Switchgrass And Miscanthus RhizosphereVTRPRAADDFATIRARMEELRRERAPDPKKENRDPEAASGARSLLKAGENRQRLETERWSTGASTRRYGSGR*
Ga0079220_1018593813300006806Agricultural SoilVTRPRAADDFATIRARMEELRRERAPAPKKGDGDLDTGAPGGRSLLKAGESRQRLESERWSTGSSSRRYGSGR*
Ga0066709_10357924513300009137Grasslands SoilEELRRERAPAPKKESRDPDAAASGGRSLLKAGDGRPRLENERWSTGSSSRRYGSGH*
Ga0126374_1187284823300009792Tropical Forest SoilMEELRREREPARQNDNRDADPGVSGGRNLFRSMEARQRSEGERWSAGPSSRRYGSGR*
Ga0126380_1115065723300010043Tropical Forest SoilIRARMEELRREREPTAKKDERDLEGGGRSLMKAGEARQRLENERWSAGPSSRRYGSGH*
Ga0126384_1002813823300010046Tropical Forest SoilMEELRREREPTAKKDERDLEGGGRSLMKAGEARQRLENERWSAGPSSRRYGSGH*
Ga0126382_1048135223300010047Tropical Forest SoilVTRPRVADDFAAIRARMEELRREREPTAKKDERDLEGGARSLMKAGEARQRLENERWSAGPSSRRYGSGH*
Ga0126378_1010018513300010361Tropical Forest SoilMGTVSLTNRRAPRRSALKPNGGDVTRPRAADDFATIRARMEELRREREPDAKKDRDPEGGGRSLLKAGEVRPRLENERWAAGPSSRRYGSGR*
Ga0126379_1082035323300010366Tropical Forest SoilVNRPRVADDFATIRARMEELRREREPARQNDSRDADPGVSGGRNLFRSMEARQRSEGERWSAGPSSRRYGSGR*
Ga0126381_10009604253300010376Tropical Forest SoilMEEIRREREPTNQKESRDPDGGGSGSRSLFRASESRQRSEGERWSAGPSSRRYGSGR*
Ga0126381_10345187213300010376Tropical Forest SoilLLRLGKSEGGDVARPRAADDFATIRARMEELRSERAQAFRKDANHGEQARSGGRNSLRTNDLRQRLEQERGPGGSSARRYGSGR*
Ga0150983_1071639323300011120Forest SoilMEELRRERAADPKKENRDPEAASGARSLLKAGESRQRLETERWSTGASTRRYGSGR*
Ga0150983_1154171113300011120Forest SoilMEELRRERAPEPKKESRGTDAAASGGRSLLKASESRQRLENERWSTGTSTRRYGSGR*
Ga0150983_1164709323300011120Forest SoilMEELRREREPASKKEGRDPDATSSGGRSLLKASENRQRLESERWSTGSSNRRYGSGR*
Ga0150983_1563069633300011120Forest SoilVTKPRAADDFATIRARLEGLRRERARTFGKESRDPDETLLGDRGLLKGTEGRQRLENERGASASSTRRYGSGR*
Ga0137362_1040668123300012205Vadose Zone SoilMEELRREREPDSKKENRDSDPGGSGGRSLLKASESRQRLENERWSTGSSSRRYGSER*
Ga0150985_11035118013300012212Avena Fatua RhizosphereMEELRRERAPDPKKESRDPDAAASGGRSLLKTSDSRQRLENERWSTGSSSRRYSSGH*
Ga0150985_11268369613300012212Avena Fatua RhizosphereMEELRRERAPAPKKESRDTDAAASGGRSLLKAGESRQRLESERWSTGASSRRYGSGR*
Ga0137360_1020581823300012361Vadose Zone SoilMEELRREREPDSKKENRDSDPGGSGGRSLLKAGESRQRLENERWSTGSSSRRYGSGR*
Ga0150984_11849771423300012469Avena Fatua RhizosphereVARPRAADDFATIRARMEELRRERAQISTKNPRDTGENASGGRSLLRATEVRQRLEQERGPAGSSARRYGSGR*
Ga0150984_12130542523300012469Avena Fatua RhizosphereMEELRRERAPTPKKESRDTDAAASGGRSLLKAGESRQRLESERWSTGASSRRYGSGR*
Ga0137395_1085665913300012917Vadose Zone SoilMEELRREREPDSKKESRDSDPGGSGGRSLMKASESRQRLDSERWSNGSSSRRYGSGR*
Ga0126369_1322313923300012971Tropical Forest SoilMEELRREREPISKKENRDPDALASGGRNLQKVGESRQKPDSERWSYGTSSRRYGSAR*
Ga0132258_1079808633300015371Arabidopsis RhizosphereMEELRRERAPAPKKGDGDLDTGAPGGRSLLKAGESRQRLESERWSTGSSSRRYGSGR*
Ga0182041_1109500113300016294SoilVTRPRAADDFATIRSRMEELRRERAQTLKDPREPDGSGGRGLPKAGEGRQRYETERSPVASSSRRY
Ga0182039_1149696313300016422SoilVTRPRAADDFATIRARMEELRRERAPDPKKESCDPDAAVSGGRSLLKAGESRQRLESERWSTGASSRRYGSGR
Ga0066662_1029024723300018468Grasslands SoilMEELRRERAPAPKKESRDPDAAASGGRSLLKAGDGRPRLENERWSTGSSSRRYGSGH
Ga0179592_1035896123300020199Vadose Zone SoilKPRAADDFATIRARLEELRRERAQTFGKESRDPGETTLGDRGLLKGTDGRQRAENERSPAGSSSRRYGSGR
Ga0210407_1075132923300020579SoilMEELRRERAPAPKKESRDPDPAASGGRSLLKASDSRQRLENERWSTGASTRRYGSGR
Ga0210403_1003944233300020580SoilMEELRRERAPAPKKESRDPEAAASGGRSLLKASDSRQRLENERWSTGSSSRRYGSGR
Ga0210401_1021409733300020583SoilMEELRRERAPAPKKEGRDTDAAASGGRSLLKAGEGRQRLENERWSTGASSRRYGSGR
Ga0210401_1057087423300020583SoilVTRPRAADDFATIRARMEELRRERAADPKKENRDPEAASGARTLLKAGESRQRLETERWSTGASTRRYGSGR
Ga0210406_1023656123300021168SoilMEELRRERAPAPKKESRDPDSAASGGRSLLKASDSRQRLENERWSTGASTRRYGSGR
Ga0210396_1078853223300021180SoilMEELRRERAPAPKKESRDPEAAASGGRSLLKASENRQRLENERWSTGSSSRRYGSGR
Ga0213877_1014926523300021372Bulk SoilVTRPRAADDFATIRARMEEIRRERAPDPKKESRDPDAATSGGRSLLKAGESRQRTESERWST
Ga0210397_1061582723300021403SoilMEELRRERAPEPKKESRGTDAAASGGRSLLKASESRQRLENERWSTGTSTRRYGSGR
Ga0210387_1073098923300021405SoilMEELRRERAPAPKKETRDLDPAASGGRSLLKASDSRQRLENERWSTGASTRRYGSGR
Ga0210386_1152730523300021406SoilRERAPAAKKETRDPDPAASGGRSLLKASDSRQRLENERWSTGASTRRYGSGR
Ga0210383_1057644623300021407SoilMEELRRERAPAPKKEGRDLDPAASGGRSLLKASDSRQRLENERWSTGASTRRYGSGR
Ga0210410_1092265223300021479SoilVTKPRAADDFATIRARLEALRRERARTFGKESRDPDETLLGDRGLLKGTEGRQRLENERGAPSSSSRRYGSGR
Ga0210410_1134687613300021479SoilTRPRAADDFATIRARMEELRRERAPAPKKEGRDLDPAASGGRSLLKASDSRQRLENERWSTGASTRRYGSGR
Ga0126371_1007089233300021560Tropical Forest SoilVTRPRAADDFATIRARMEELRREREPDAKKDRDPEGGGRSLLKAGEVRPRLENERWAAGPSSRRYGSGR
Ga0126371_1366278913300021560Tropical Forest SoilRPRAADDFATIRARMEELRRERAQSLKDPREPDGSGGRSLLKAGEGRQRYESERSPAGSSSRRYGSGR
Ga0242650_101935923300022503SoilMEELRRERAPAPKKEGRDPDPAASGGRSLLKASDSRQRLENERWSTGASTRRYGSGR
Ga0242676_104166423300022512SoilRAASKLDEALRRRRVTRPRAADDFATIRARMEELRRERAPAPKDPEAATSGGRSLLKASDSRQRLESERWSTGASTRRYGLGR
Ga0242669_106833823300022528SoilTIRARMEELRRERAPAPRKESRDPEAAASGGRSLLKVSENRQRLENERWSTGSSNRRYGSGR
Ga0242660_102663213300022531SoilMEELRRERAPEPKKESRDPDPAASGGRSLLKASDSRQRLENERWSTGASTRRYGSGR
Ga0242660_118211423300022531SoilPAPRKESRDPEAAASGGRSLLKVSENRQRLENERWSTGSSNRRYGSGR
Ga0242662_1004348113300022533SoilRAADDFATIRARMEELRRERAPAPKKESRDPDPAASGGRSLLKASDSRQRLENERWSTGASTRRYGSGR
Ga0212123_1072592523300022557Iron-Sulfur Acid SpringMEELRRERAPAPKKESRDPEAAASGGRSLLKASDNRQRLENERWSAGSSSRRYGSGR
Ga0242653_106888623300022712SoilRAADDFATIRARMEELRRERAPAPKKESRDPEAAASGGRSLLKASENRQRLENERWSTGSSSRRYGSGR
Ga0242678_105006013300022715SoilMEELRRERAPEPKKESRDPDPAAAGGRSLLKASDGRQRLENERWSTGASTRRYGSGR
Ga0242678_106040813300022715SoilMEELRRERAPAPKKESRDPEAAASGGRNLVKASESRQRLENERWSTGSSSRRYGSGR
Ga0242661_103220113300022717SoilVTRPRVADDFATIRARMEELRRERAPAPKKESRDPEAAASGGRSLLKVSENRQRLENERWSTGSSNRRYGSGR
Ga0242661_109648713300022717SoilMEELRRERAPAPKKEGRDTDAAASGGRSLLKAGEGRQRLENERWSTGPSSRRYGSGR
Ga0242665_1025321523300022724SoilMEELRRERAPAPRKESRDPEAAASGGRSLLKVSENRQRLENERWSTGSSNRRYGSGR
Ga0207692_1095117723300025898Corn, Switchgrass And Miscanthus RhizosphereRERATAPKKESRDPEVAASGGRSLLKASEGRQRLENERWSTGASTRRYGSGR
Ga0207663_1084608113300025916Corn, Switchgrass And Miscanthus RhizosphereVTRPRAADDFATIRARMEELRREREPAVQKEDRDPEGGGRSLMKAGDARQRLENERWSSG
Ga0207663_1105817613300025916Corn, Switchgrass And Miscanthus RhizosphereVTRPRAADDFATIRARMEELRRERAADPKKENRDPEAASGARSLLKAGESRQRLETERWSTGASTRRYGSGR
Ga0207663_1162694713300025916Corn, Switchgrass And Miscanthus RhizosphereMEELRRERAPEPKKESRDPDPAAVGGRSLLKASDGRQRLENERWSTGASTRRYGSGR
Ga0207700_1038291523300025928Corn, Switchgrass And Miscanthus RhizosphereMEELRRERAPAPKKESRDPDPAASGGRSLLKASDSRQRLESERWSTGASTRRYGSGR
Ga0257160_101280523300026489SoilVTRPRAADDFATIRARMEELRRERAPDPMKERRDTDATVSGGRSLLKAGDNRQRLESERWSTGGSSRRYGSGR
Ga0209648_1014001023300026551Grasslands SoilMEELRRERAPAPKKESRDTDAAASGGRSLLKASESRQRLENERWSTGASSRRYGSGR
Ga0179587_1076295723300026557Vadose Zone SoilVTRPRAADDFATIRARMEELRRERAPDPKEENRDPDAAVSGGRSLLKASESRQRLENERWSTGASSRRYSSGR
Ga0207949_100132543300026999Forest SoilVTRPRAADDFATIRARMEELRRERAPAPRKESRDPEAAASGGRSLLKVSENRQRLENERWSTGSSTRRYGSGR
Ga0208098_101364123300027172Forest SoilVTRPRAADDFATIRARMEELRRERAPAPRKESRDPEAAASGGRSLLKVSENRQRLENERWSTGSSNRRYGSGR
Ga0209177_1031281813300027775Agricultural SoilMEELRRERAPAPKRDGRDPDAAASGGRSLLKASDGRQRLENERWSTGASSRR
Ga0209448_1007629613300027783Bog Forest SoilMEELRRERAPAPKKESRDPDIAASGGRSLLKASESRQRLENERWSTGSSSRRYGSGH
Ga0209139_1006973813300027795Bog Forest SoilMEELRRERAPAPKKESRDPDAAASGGRSLLKAGESRQRLENERWSTGASSRRYGSGR
Ga0209656_1017370313300027812Bog Forest SoilMEELRREREPGSKKESRDADPGASGGRSLLKASESRQRLESERWSNGSSSRRYGSGR
Ga0209693_1044442813300027855SoilVTRPRAADDFATIRARMEELRRERAPAPRKESRDPEAAASGGRSLLKVSENRQRLENERWSTGS
Ga0209275_1034987313300027884SoilMEELRRERAPAPRKESRDPEAAASGGRSLLKVSENRQRLENERWSTGSSTRRYGSGR
Ga0222749_1054242613300029636SoilRPRAADDFATIRARMEELRRERAPAPKKEGRDLDPAASGGRSLLKASDSRQRLENERWSTGASTRRYGSGR
Ga0308200_110046423300030905SoilVTRPRAADDFATIRARMEELRRERAPDPKKENRDPEAASGARSLLKIGESRQRLETERWSTGASTRRYGSGR
Ga0308189_1029939323300031058SoilAADDFATIRARMEELRRERAPDPKKENRDPEAASGARSLLKIGESRQRLETERWSTGASTRRYGSGR
Ga0308193_108476613300031096SoilQIRGGDVTRPRAADDFATIRARMEELRRERAPDPKKENRDPEAASGARSLLKIGESRQRLETERWSTGASTRRYGSGR
Ga0170822_1250714523300031122Forest SoilARPRAADDFATIRARMEELRREREPDRKKESRDSDPGASGGRSLLKASENRQRLENERWSTGASTRRYGSGR
Ga0170824_10351613313300031231Forest SoilPRAADDFATIRARMEELRRERAPAPKKDPDAAASGGRSLLKASESRQRLENERWSTGASSRRYSSGR
Ga0170824_11104704613300031231Forest SoilMEELRREREPGSKKESRDADPGASGGRSLLKTSESRQRLENERWSTGASSRRYSSGR
Ga0170819_1344474413300031469Forest SoilMEELRRERAPAPKKDPDAAASGGRSLLKASESRQRLENERWSTGASSRRYSSGR
Ga0307477_1049429523300031753Hardwood Forest SoilVTRPRAADDFATIRARMEELRRERAPAPRKESRDPEAAASGGRSLLKTSESRQRLENERWSTGSSNRRYGSGR
Ga0318547_1013812033300031781SoilVARPRAADDFATIRARMEELRRERAQSLKDPREPDGAGGRGLLKAGEGRQRYDSERSPVGSSSRRYGSGR
Ga0318557_1021959123300031795SoilVARPRAADDFATIRARMEELRRERAQSLKDPREPDGAGGRGLLKAREPDGSGRSLLKAGEGRQRYESERSPVGSSSRRYGSGR
Ga0306919_1052649933300031879SoilAPDPKKESRDPDAAVSGGRSLLKAGESRQRLESERWSTGASSRRYGSGR
Ga0306919_1056453613300031879SoilPSEPIDAQQKGGNVARPRAADDFATIRARMEELRRERAQSLKEPREPDGSGRSLLKAGEGRQRYESERSPVGSSSRRYGSGR
Ga0306919_1094198613300031879SoilFATIRARMEELRRERAQASAKDARDTEETVSGGRSLLRATEVRQRLEQERWPAGSSARRYGSGR
Ga0306919_1133099913300031879SoilVTRPRAADDFATIRARMEELRRERASDPKKESRDPDAAVSGGRSLLKAGESRQRLESERWSTGASSR
Ga0306919_1136345713300031879SoilSHNHKQHRSSTKLLGGNVTRPRAADDFATIRSRMEELRRERAQTLKDPREPDGSGGRGLPKAGEGRQRYETERSPVASSSRRYGSGR
Ga0306923_1051136623300031910SoilVTRPRAADDFATIRARMEELRRERAPDPKKESRDPDAAVSGGRSLLKAGESRQRLESERWSTGASSRRYGSGR
Ga0306923_1230007813300031910SoilVARPRAADDFATIRARMEELRRERAQSLKEPREPDGSGRSLLKAGEGRQRYESERSPVGSSSRRYGSGR
Ga0306921_1105011623300031912SoilVTRPRAADDFATIRSRMEELRRERAQTLKDPREPDGSGGRGLPKAGEGRQRYETERSPVASSSRRYGSGR
Ga0306922_1017302243300032001SoilFATIRARMEELRRERASDPKKESRDPDAAVSGGRSLLKAGESRQRLESERWSTGASSRRYGSGR
Ga0318533_1038917713300032059SoilARMEEIRREREPINQKESRDPDGGGAGSRSLFRASESRQRSEGERWSAGPSSRRYGSGR
Ga0306924_1034007833300032076SoilVARPRAADDFATIRARMEELRRERAQSLKDPREPDGAGGRGLLKAGEGRQRYESERSPVGSSSRRYGSGR
Ga0306920_10397359923300032261SoilLRRERAPDPKKESRDPDAAVSGGRSLLKAGESRQRLESERWSTGASSRRYGSGR
Ga0310914_1186258723300033289SoilFATIRARMEELRREREPANQKENRDPDGGGSGSRSLFRSSEGRQRSEGERWSAGPSGRRYGSGR


 ⦗Top⦘


© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.