NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome / Metatranscriptome Family F075308

Metagenome / Metatranscriptome Family F075308

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F075308
Family Type Metagenome / Metatranscriptome
Number of Sequences 119
Average Sequence Length 70 residues
Representative Sequence MSLAYDAERRRRSLTGPSTQPAGRFARPGSAAAANTITASQARAARQREARRDEQAVAAWLRELAGRPR
Number of Associated Samples 82
Number of Associated Scaffolds 119

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 50.42 %
% of genes near scaffold ends (potentially truncated) 27.73 %
% of genes from short scaffolds (< 2000 bps) 92.44 %
Associated GOLD sequencing projects 77
AlphaFold2 3D model prediction Yes
3D model pTM-score0.39

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Bacteria (57.143 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil
(26.891 % of family members)
Environment Ontology (ENVO) Unclassified
(38.655 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Plant → Plant rhizosphere
(59.664 % of family members)


 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      

 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 40.21%    β-sheet: 0.00%    Coil/Unstructured: 59.79%
Feature Viewer
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.39
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 119 Family Scaffolds
PF00923TAL_FSA 41.18
PF01040UbiA 23.53
PF07690MFS_1 0.84
PF00456Transketolase_N 0.84
PF13466STAS_2 0.84
PF04545Sigma70_r4 0.84
PF03167UDG 0.84

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 119 Family Scaffolds
COG0176Transaldolase/fructose-6-phosphate aldolaseCarbohydrate transport and metabolism [G] 41.18
COG0021TransketolaseCarbohydrate transport and metabolism [G] 0.84
COG0692Uracil-DNA glycosylaseReplication, recombination and repair [L] 0.84
COG1573Uracil-DNA glycosylaseReplication, recombination and repair [L] 0.84
COG3663G:T/U-mismatch repair DNA glycosylaseReplication, recombination and repair [L] 0.84
COG3959Transketolase, N-terminal subunitCarbohydrate transport and metabolism [G] 0.84

 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms57.14 %
UnclassifiedrootN/A42.86 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300002568|C688J35102_118058304Not Available526Open in IMG/M
3300002568|C688J35102_120177921All Organisms → cellular organisms → Bacteria913Open in IMG/M
3300003203|JGI25406J46586_10000426All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter19440Open in IMG/M
3300003987|Ga0055471_10063899All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia1023Open in IMG/M
3300003992|Ga0055470_10167719All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria585Open in IMG/M
3300004081|Ga0063454_101982429All Organisms → cellular organisms → Bacteria514Open in IMG/M
3300005093|Ga0062594_102724386Not Available548Open in IMG/M
3300005341|Ga0070691_10745679Not Available592Open in IMG/M
3300005341|Ga0070691_10899679Not Available546Open in IMG/M
3300005343|Ga0070687_100609666All Organisms → cellular organisms → Bacteria751Open in IMG/M
3300005353|Ga0070669_101936560Not Available515Open in IMG/M
3300005355|Ga0070671_101115745All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia693Open in IMG/M
3300005441|Ga0070700_100927840Not Available711Open in IMG/M
3300005458|Ga0070681_10958187All Organisms → cellular organisms → Bacteria775Open in IMG/M
3300005459|Ga0068867_101153193Not Available710Open in IMG/M
3300005544|Ga0070686_101162122Not Available640Open in IMG/M
3300005562|Ga0058697_10180180All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter944Open in IMG/M
3300005618|Ga0068864_101416371All Organisms → cellular organisms → Bacteria697Open in IMG/M
3300005937|Ga0081455_10115607All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria2123Open in IMG/M
3300005937|Ga0081455_10353894All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1035Open in IMG/M
3300005937|Ga0081455_10807093Not Available589Open in IMG/M
3300005937|Ga0081455_10894473Not Available552Open in IMG/M
3300005981|Ga0081538_10001109All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → unclassified Solirubrobacter → Solirubrobacter sp. URHD008228522Open in IMG/M
3300005981|Ga0081538_10076303All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1812Open in IMG/M
3300005981|Ga0081538_10099600All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → unclassified Solirubrobacter → Solirubrobacter sp.1468Open in IMG/M
3300006169|Ga0082029_1266657All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter1263Open in IMG/M
3300006169|Ga0082029_1296188All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter1747Open in IMG/M
3300006169|Ga0082029_1377467All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia1276Open in IMG/M
3300006755|Ga0079222_11406999All Organisms → cellular organisms → Bacteria → Terrabacteria group646Open in IMG/M
3300006844|Ga0075428_100101877All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter3130Open in IMG/M
3300006846|Ga0075430_100356408All Organisms → cellular organisms → Bacteria1208Open in IMG/M
3300006846|Ga0075430_101399881Not Available575Open in IMG/M
3300006880|Ga0075429_101969378Not Available506Open in IMG/M
3300006894|Ga0079215_10599922All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia717Open in IMG/M
3300006904|Ga0075424_101044566All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria871Open in IMG/M
3300006969|Ga0075419_10138518All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → unclassified Solirubrobacter → Solirubrobacter sp.1585Open in IMG/M
3300006969|Ga0075419_10539778All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → environmental samples → uncultured Rubrobacteraceae bacterium814Open in IMG/M
3300007790|Ga0105679_10064392All Organisms → cellular organisms → Bacteria1184Open in IMG/M
3300009094|Ga0111539_13525731Not Available502Open in IMG/M
3300009147|Ga0114129_10060434All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales5298Open in IMG/M
3300009147|Ga0114129_12483066Not Available620Open in IMG/M
3300009148|Ga0105243_11205532Not Available770Open in IMG/M
3300009156|Ga0111538_10949063All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → unclassified Solirubrobacter → Solirubrobacter sp.1088Open in IMG/M
3300009156|Ga0111538_12490968Not Available649Open in IMG/M
3300009162|Ga0075423_12633349All Organisms → cellular organisms → Bacteria → Terrabacteria group550Open in IMG/M
3300010038|Ga0126315_10577469All Organisms → cellular organisms → Bacteria724Open in IMG/M
3300010038|Ga0126315_11103039Not Available536Open in IMG/M
3300010039|Ga0126309_10756611All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia630Open in IMG/M
3300010039|Ga0126309_11008832Not Available559Open in IMG/M
3300010040|Ga0126308_10464792All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → Solirubrobacter soli851Open in IMG/M
3300010045|Ga0126311_11433795Not Available577Open in IMG/M
3300010166|Ga0126306_10720340All Organisms → cellular organisms → Bacteria801Open in IMG/M
3300010371|Ga0134125_12111168Not Available613Open in IMG/M
3300010401|Ga0134121_11590217All Organisms → cellular organisms → Bacteria → Terrabacteria group673Open in IMG/M
3300012212|Ga0150985_100113571All Organisms → cellular organisms → Bacteria → Terrabacteria group1003Open in IMG/M
3300012212|Ga0150985_112772467Not Available1156Open in IMG/M
3300012212|Ga0150985_117006341All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia692Open in IMG/M
3300012469|Ga0150984_104418846Not Available621Open in IMG/M
3300012469|Ga0150984_110074000All Organisms → cellular organisms → Bacteria → Terrabacteria group973Open in IMG/M
3300012469|Ga0150984_110927537Not Available738Open in IMG/M
3300012951|Ga0164300_11103370Not Available519Open in IMG/M
3300012985|Ga0164308_11502165Not Available619Open in IMG/M
3300013011|Ga0169967_1020349All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter1380Open in IMG/M
3300013306|Ga0163162_12776136Not Available564Open in IMG/M
3300014254|Ga0075312_1024366Not Available1073Open in IMG/M
3300014259|Ga0075311_1089892All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria644Open in IMG/M
3300014311|Ga0075322_1071674Not Available780Open in IMG/M
3300014326|Ga0157380_13451589Not Available506Open in IMG/M
3300014487|Ga0182000_10208909All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia753Open in IMG/M
3300017792|Ga0163161_11531679Not Available586Open in IMG/M
3300018422|Ga0190265_10116549All Organisms → cellular organisms → Bacteria2542Open in IMG/M
3300018422|Ga0190265_10314233All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter1642Open in IMG/M
3300018422|Ga0190265_10608881All Organisms → cellular organisms → Bacteria1212Open in IMG/M
3300018422|Ga0190265_10631738All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter1191Open in IMG/M
3300018422|Ga0190265_11955795Not Available692Open in IMG/M
3300018422|Ga0190265_12200949All Organisms → cellular organisms → Bacteria → Terrabacteria group654Open in IMG/M
3300018422|Ga0190265_12254578Not Available647Open in IMG/M
3300018422|Ga0190265_13197639Not Available547Open in IMG/M
3300018422|Ga0190265_13557272Not Available520Open in IMG/M
3300018429|Ga0190272_10053448All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria2353Open in IMG/M
3300018429|Ga0190272_10802760All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter866Open in IMG/M
3300018429|Ga0190272_11328820All Organisms → cellular organisms → Bacteria → Terrabacteria group717Open in IMG/M
3300018432|Ga0190275_11421474All Organisms → cellular organisms → Bacteria771Open in IMG/M
3300018466|Ga0190268_10043687All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1717Open in IMG/M
3300018466|Ga0190268_10088432All Organisms → cellular organisms → Bacteria1394Open in IMG/M
3300018466|Ga0190268_11534651Not Available581Open in IMG/M
3300018466|Ga0190268_12338071Not Available505Open in IMG/M
3300018466|Ga0190268_12354545Not Available504Open in IMG/M
3300018469|Ga0190270_10776520All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia961Open in IMG/M
3300018481|Ga0190271_11466509All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter800Open in IMG/M
3300018481|Ga0190271_13705041Not Available512Open in IMG/M
3300019377|Ga0190264_10149998All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter1200Open in IMG/M
3300019767|Ga0190267_11196215Not Available556Open in IMG/M
3300020070|Ga0206356_10038268All Organisms → cellular organisms → Bacteria → Terrabacteria group638Open in IMG/M
3300021184|Ga0196959_10096643Not Available674Open in IMG/M
3300024430|Ga0196962_10035704Not Available1494Open in IMG/M
3300024430|Ga0196962_10037375All Organisms → cellular organisms → Bacteria1460Open in IMG/M
3300024430|Ga0196962_10114468All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia842Open in IMG/M
3300025908|Ga0207643_11094083Not Available514Open in IMG/M
3300025927|Ga0207687_11288526All Organisms → cellular organisms → Bacteria → Terrabacteria group628Open in IMG/M
3300025961|Ga0207712_11131886Not Available697Open in IMG/M
3300026075|Ga0207708_10213299All Organisms → cellular organisms → Bacteria1544Open in IMG/M
3300027880|Ga0209481_10164777All Organisms → cellular organisms → Bacteria1098Open in IMG/M
3300027907|Ga0207428_10027348All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria4749Open in IMG/M
3300028719|Ga0307301_10323340Not Available507Open in IMG/M
3300028744|Ga0307318_10211329Not Available672Open in IMG/M
3300028771|Ga0307320_10455149Not Available516Open in IMG/M
3300028799|Ga0307284_10058454All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → unclassified Solirubrobacter → Solirubrobacter sp. URHD00821372Open in IMG/M
3300028824|Ga0307310_10378144All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia700Open in IMG/M
3300028876|Ga0307286_10132989All Organisms → cellular organisms → Bacteria885Open in IMG/M
3300028881|Ga0307277_10041087All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter1866Open in IMG/M
3300030336|Ga0247826_10997586All Organisms → cellular organisms → Bacteria → Terrabacteria group665Open in IMG/M
3300031229|Ga0299913_10539735Not Available1151Open in IMG/M
3300031548|Ga0307408_100084286All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter2384Open in IMG/M
3300031824|Ga0307413_10240269Not Available1337Open in IMG/M
3300031852|Ga0307410_11616885Not Available573Open in IMG/M
3300031852|Ga0307410_12132375Not Available501Open in IMG/M
3300032126|Ga0307415_101290561All Organisms → cellular organisms → Bacteria691Open in IMG/M
3300032159|Ga0268251_10211298Not Available766Open in IMG/M


 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil26.89%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere12.61%
Serpentine SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil5.88%
SoilEnvironmental → Terrestrial → Soil → Sand → Desert → Soil4.20%
Tabebuia Heterophylla RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere4.20%
RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere4.20%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere3.36%
Termite NestEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Termite Nest2.52%
Natural And Restored WetlandsEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands2.52%
SoilEnvironmental → Terrestrial → Soil → Loam → Grasslands → Soil2.52%
Avena Fatua RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere2.52%
Tabebuia Heterophylla RhizosphereHost-Associated → Plants → Roots → Rhizosphere → Unclassified → Tabebuia Heterophylla Rhizosphere2.52%
Avena Fatua RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere2.52%
Natural And Restored WetlandsEnvironmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands1.68%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil1.68%
Agricultural SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil1.68%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere1.68%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere1.68%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere1.68%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere1.68%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere1.68%
AgaveHost-Associated → Plants → Phylloplane → Unclassified → Unclassified → Agave1.68%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil0.84%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere0.84%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil0.84%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural → Soil0.84%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Uranium Contaminated → Soil0.84%
Corn RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere0.84%
RockEnvironmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified → Unclassified → Rock0.84%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere0.84%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere0.84%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere0.84%

Visualization
Powered by ApexCharts



Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300002568Grasslands soil microbial communities from Hopland, California, USA - 2EnvironmentalOpen in IMG/M
3300003203Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2Host-AssociatedOpen in IMG/M
3300003987Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_TuleB_D2EnvironmentalOpen in IMG/M
3300003992Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_TuleB_D1EnvironmentalOpen in IMG/M
3300004081Grasslands soil microbial communities from Hopland, California, USA - 2 (version 2)EnvironmentalOpen in IMG/M
3300005093Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All BlocksEnvironmentalOpen in IMG/M
3300005341Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaGEnvironmentalOpen in IMG/M
3300005343Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaGEnvironmentalOpen in IMG/M
3300005353Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaGHost-AssociatedOpen in IMG/M
3300005355Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaGHost-AssociatedOpen in IMG/M
3300005441Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaGEnvironmentalOpen in IMG/M
3300005458Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaGEnvironmentalOpen in IMG/M
3300005459Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2Host-AssociatedOpen in IMG/M
3300005544Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaGEnvironmentalOpen in IMG/M
3300005562Agave microbial communities from Guanajuato, Mexico - As.Ma.eHost-AssociatedOpen in IMG/M
3300005618Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2Host-AssociatedOpen in IMG/M
3300005937Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1Host-AssociatedOpen in IMG/M
3300005981Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1Host-AssociatedOpen in IMG/M
3300006169Termite nest microbial communities from Madurai, IndiaEnvironmentalOpen in IMG/M
3300006755Agricultural soil microbial communities from Georgia to study Nitrogen management - GA PlitterEnvironmentalOpen in IMG/M
3300006844Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2Host-AssociatedOpen in IMG/M
3300006846Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4Host-AssociatedOpen in IMG/M
3300006880Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3Host-AssociatedOpen in IMG/M
3300006894Agricultural soil microbial communities from Utah to study Nitrogen management - NC ControlEnvironmentalOpen in IMG/M
3300006904Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3Host-AssociatedOpen in IMG/M
3300006969Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3Host-AssociatedOpen in IMG/M
3300007790Microbial communities of desert soil contaminated with blood from dead anthrax infected zebra in Etosha National Park, Namibia. Combined Assembly of 14 sequencing projectsEnvironmentalOpen in IMG/M
3300009094Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)Host-AssociatedOpen in IMG/M
3300009147Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)Host-AssociatedOpen in IMG/M
3300009148Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaGHost-AssociatedOpen in IMG/M
3300009156Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)Host-AssociatedOpen in IMG/M
3300009162Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2Host-AssociatedOpen in IMG/M
3300010038Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot106EnvironmentalOpen in IMG/M
3300010039Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot56EnvironmentalOpen in IMG/M
3300010040Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot55EnvironmentalOpen in IMG/M
3300010045Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot61EnvironmentalOpen in IMG/M
3300010166Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot27EnvironmentalOpen in IMG/M
3300010371Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1EnvironmentalOpen in IMG/M
3300010401Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1EnvironmentalOpen in IMG/M
3300012212Combined assembly of Hopland grassland soilHost-AssociatedOpen in IMG/M
3300012469Combined assembly of Soil carbon rhizosphereHost-AssociatedOpen in IMG/M
3300012951Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MGEnvironmentalOpen in IMG/M
3300012985Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_246_MGEnvironmentalOpen in IMG/M
3300013011Gypsum crust endolithic microbial communities from the Atacama Desert, Chile - KM37EnvironmentalOpen in IMG/M
3300013306Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaGHost-AssociatedOpen in IMG/M
3300014254Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNE_CattailB_D2EnvironmentalOpen in IMG/M
3300014259Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNE_CattailB_D1EnvironmentalOpen in IMG/M
3300014311Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_CattailB_D1EnvironmentalOpen in IMG/M
3300014326Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaGHost-AssociatedOpen in IMG/M
3300014487Bulk soil microbial communities from Mexico - Magueyal (Ma) metaGEnvironmentalOpen in IMG/M
3300017792Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaGHost-AssociatedOpen in IMG/M
3300018422Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 124 TEnvironmentalOpen in IMG/M
3300018429Populus adjacent soil microbial communities from riparian zone of Shoshone River, Wyoming, USA - 504 TEnvironmentalOpen in IMG/M
3300018432Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 550 TEnvironmentalOpen in IMG/M
3300018466Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 TEnvironmentalOpen in IMG/M
3300018469Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 TEnvironmentalOpen in IMG/M
3300018481Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 356 TEnvironmentalOpen in IMG/M
3300019377Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 112 TEnvironmentalOpen in IMG/M
3300019767Populus adjacent soil microbial communities from riparian zone of Oak Creek, Arizona, USA - 239 TEnvironmentalOpen in IMG/M
3300020070Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-1 (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300021184Soil microbial communities from Anza Borrego desert, Southern California, United States - S1+v_20EnvironmentalOpen in IMG/M
3300024430Soil microbial communities from Anza Borrego desert, Southern California, United States - S3+v_20EnvironmentalOpen in IMG/M
3300025908Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300025927Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025961Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300026075Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300027880Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3 (SPAdes)Host-AssociatedOpen in IMG/M
3300027907Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes)Host-AssociatedOpen in IMG/M
3300028719Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_182EnvironmentalOpen in IMG/M
3300028744Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_367EnvironmentalOpen in IMG/M
3300028771Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_369EnvironmentalOpen in IMG/M
3300028799Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_123EnvironmentalOpen in IMG/M
3300028824Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_197EnvironmentalOpen in IMG/M
3300028876Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_140EnvironmentalOpen in IMG/M
3300028881Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_116EnvironmentalOpen in IMG/M
3300030336Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day1EnvironmentalOpen in IMG/M
3300031229Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT155D38EnvironmentalOpen in IMG/M
3300031548Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3Host-AssociatedOpen in IMG/M
3300031824Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2Host-AssociatedOpen in IMG/M
3300031852Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3Host-AssociatedOpen in IMG/M
3300032126Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2Host-AssociatedOpen in IMG/M
3300032159Agave microbial communities from Guanajuato, Mexico - As.Ma.e (v2)Host-AssociatedOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap


 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
C688J35102_11805830413300002568SoilMCRAMSLAYDAERRRQSLAGPPSQSAGRFSRPGISAAANTITASQARAARQREARRDEQAVAAWLRELAGRPR*
C688J35102_12017792123300002568SoilMSLAYDAERRRQSPAGPPSQKAGRFARPGTAGTAANTIPASQARAARQREARRDEQAVAAWLRELAGRPR*
JGI25406J46586_10000426203300003203Tabebuia Heterophylla RhizosphereMSLAYDAERRGPTVPGTSPQTAGRFGRSVRSAAANTITASQARAARQREARRDEQAVAAWLRELAGRPR*
Ga0055471_1006389923300003987Natural And Restored WetlandsMSLAYDAERPGRQPLTGKTAAGAMSRFSRPGGPPAANTITASQARAARQREARRDEQAVAAWLRELAGRPR*
Ga0055470_1016771923300003992Natural And Restored WetlandsMSLAYDAERRRRSLTGSSPQPAGRFARPGSAAANTITASQARAARQREARRDEQAVAAWLRELAGRPR*
Ga0063454_10198242923300004081SoilMSLAYDAERRRQTLAGPPSQTAGRFGRPGTSAAANTIPASQARAARQREQRRDQQAVAAWLRELAGRPR
Ga0062594_10272438623300005093SoilMSLAYDAERRRQSLAGPPSQSAGRFGRSGNPAAANTITASQARAARQREARRDEQAVAAWLRELAGRPR*
Ga0070691_1074567923300005341Corn, Switchgrass And Miscanthus RhizosphereAPMSLAYDAERRRQSLAGPPSQSAGRFGRSGNPAAANTITASQARAARQREARRDEQAVAAWLRELAGRPR*
Ga0070691_1089967913300005341Corn, Switchgrass And Miscanthus RhizosphereMSLAYDAERRRQTLAGPPSQSAGRFGRPGTSAAANTIPASQARAARQREQRRDEQAVAAWLRELAGRPR*
Ga0070687_10060966623300005343Switchgrass RhizosphereMSLAYDAERRRQSLAGPPSQSAGRFGRSGNPAAANTITASQARAARQREKRRDEQAV
Ga0070669_10193656013300005353Switchgrass RhizosphereMSLAYDAERRRPTLQGSSAQTAGRFARPGSTAAANTITASQARAARQREARRDEQAVSAWLRELAGRPR*
Ga0070671_10111574513300005355Switchgrass RhizosphereQSLAGPPSQSAGRFGRSGNPAAANTITASQARAARQREARRDEQAVAAWLRELAGRPR*
Ga0070700_10092784013300005441Corn, Switchgrass And Miscanthus RhizosphereVTCAPMSLAYDAERRRQTLAGPPSQSAGRFGRPGTSAAANTIPASQARAARQREQRRDEQAVAAWLRELAGRPR*
Ga0070681_1095818713300005458Corn RhizosphereMSLAYDAERRRQPLAGPPQTRGRFPRPGTAAAANTITASQARAARQREARRDEQAVSAW
Ga0068867_10115319323300005459Miscanthus RhizosphereYDAERRRQSLAGPPSQSAGRFGRSGNPAAANTITASQARAARQREARRDEQAVAAWLRELAGRPR*
Ga0070686_10116212223300005544Switchgrass RhizosphereVGVTSAPMSLAYDAERRRQSLAGPPSQSAGRFGRSGNPAAANTITASQARAARQREARRDEQAVAAWLRELAGRPR*
Ga0058697_1018018023300005562AgaveMPLGHDTERRHRPGIGKPLQQSGRFARPGSSAAPNTITASQARAARQREARRDEQAVAAWLRELAGRPR*
Ga0068864_10141637123300005618Switchgrass RhizosphereMSLAYDAEPRRRSLTSSPTQTAGRFSRPGSAVAANTIKASQARAARQREARRDEQAVAAWLRELAGRPR*
Ga0081455_1011560723300005937Tabebuia Heterophylla RhizosphereMSLAYDAERPGRQPLTGKTAAAPSRFPRPGGPPAANTITASQARAARQREARRDEQAVAAWLRELAGRPR*
Ga0081455_1035389423300005937Tabebuia Heterophylla RhizosphereMSLAYDAERRRRGRTGLSPQVAGRFARPGSAAPANTITASQARAARQREKRRDEQAVAAWLRELAGRPR*
Ga0081455_1080709313300005937Tabebuia Heterophylla RhizosphereMARDVWSPAMSVAYDAERPGRQPLTGKAAAPASRFGRPASAGGRNTITASQARAARQREARRDEQAVAAWLR
Ga0081455_1089447313300005937Tabebuia Heterophylla RhizosphereMSLAYDAERQGRRSLTGSLTQPPRRAGTGRSAPTNTITASQARAARQREARRDEQAVSAWLRELAGRPR*
Ga0081538_10001109193300005981Tabebuia Heterophylla RhizosphereMCPAMSLAYDAERPGRQPLTGKVPAKAGRFARPGSSSTGPNTITASQARAARQREARRDEQAVAAWLRELSGRPR*
Ga0081538_1007630333300005981Tabebuia Heterophylla RhizosphereMSLAYDAERPGRQPLTGKVSARAGRFARPGSSSTSPNTITASQARAARQREARRDEQAVAAWLRELSGRPR*
Ga0081538_1009960023300005981Tabebuia Heterophylla RhizosphereMSLAYDAERPGRQSLTGKTAAGAASRFPRPGGPPAANTITASQARAARQREARRDEQAVAAWLRELAGRPR*
Ga0082029_126665723300006169Termite NestMSLAYDAERRRRSRTGSPTQTAGRFARPGSAAAANTITASQARAARQREARRDEQAVAAWLRELAGRPR*
Ga0082029_129618823300006169Termite NestMSVAYDAERPGRQPLTGRLLRLQVASGGPEARAAVTITASQARAARQREARRDEQAVAAWLRELSGRPR*
Ga0082029_137746713300006169Termite NestMSLAYDAKRPGRQPLTGKTAAVPRRFPRPGGPPGANTITASQARAARQREARRDEQAVAAWLRELAGRPR*
Ga0079222_1140699923300006755Agricultural SoilMCPAMSLAYDAERRRPPVPGTSPQTVGRFVRPGRSAAANTITASQARAARQREARRDEQAVAAWLRELAGRPR*
Ga0075428_10010187733300006844Populus RhizosphereMSLAYDAERRRRSLTGSSTQTAGRFARPGSTAAANTITASQARAARQREARRDEQAVSAWLRELAGRPR*
Ga0075430_10035640823300006846Populus RhizosphereMSLAYDAERPGHQPLTGKTAAAPRRFSRPGGPPAANTITASQARAARQREARRDEQAVAAWLRELAGRPR*
Ga0075430_10139988123300006846Populus RhizosphereMSARMSLAYDAERLGRQPLTGKAPMPAGRFGRPGSSARTNTITASQARAARQREARRDEQAVAAWLRELSGRPR*
Ga0075429_10196937813300006880Populus RhizosphereMSLAYDAERRRRSLTGSSTQTAGRFARPGSTAAANTITASQARAARQREARRDEQAVSAWLRELAGRSLSARQFS
Ga0079215_1059992223300006894Agricultural SoilWSAGMSVAYDAGRRGPPLTGKAQRLPVASGGRQAPVAVTITASQARAARQREARRDEQAVAAWLRELSGRPR*
Ga0075424_10104456613300006904Populus RhizosphereMCPAMSLAYDAERRRPPVPGTSPQTVGRFARPGRSAAANTITASQARAARQREARRDEQAVAAWLRELAGRPR*
Ga0075419_1013851823300006969Populus RhizosphereMSLAYDAERRRRSLTGPSTQTAGRFARPGSTAAANTITASQARAARQREARRDEQAVSAWLRELAGRPR*
Ga0075419_1053977823300006969Populus RhizosphereMSLAYDAERPGHQPLTGKTAAAPRRFSRPGRPPAANTITASQARAARQREARRDEQAVAAWLRELAGRPR*
Ga0105679_1006439223300007790SoilMSGRMSLAYDAKRRQPQPGTNAPSPGRFGRLSGSPARNTITASQARAARQREQRRDEQAVSAWLRELAGRPR*
Ga0111539_1352573113300009094Populus RhizosphereRGLFNGHFVVDSWRDPGVTSSPMSLAYDAERRRRSLTGPSTQTAGRFARPGSTAAANTITASQARAARQREARRDEQAVSAWLRELAGRPR*
Ga0114129_1006043413300009147Populus RhizosphereMCAAMSLAYDAERRRPRVPGLSPKTTGRFGRSGGSAAANTITASQARAARQREARRDEQAVAAWLRELAGRPR*
Ga0114129_1248306613300009147Populus RhizosphereMSLAYDAERLGRQPLTGKVPMPAGRFGRPGSSARTNTITASQARAARQREARRDEQAVAAWLRELAGRPR*
Ga0105243_1120553213300009148Miscanthus RhizosphereMSLAYDAERRRQTLAGPPSQSAGRFGRSGNPAAANTITASQARAARQREARRDEQAVAAWLRELAGRPR*
Ga0111538_1094906323300009156Populus RhizosphereMSVAYDAERPGRQPLKGKAPAPAGRFARSVSPGGRNTITASQARAARQREARRDEQAVAAWLRELSGRPR*
Ga0111538_1249096823300009156Populus RhizosphereMSLAYDAERRRQSLPGPPSRTAARFARPGTSGTAANTITAIQARAARQREARRDEQAVAAWLRELAGR
Ga0075423_1263334913300009162Populus RhizosphereMSLAYDAERRRPPVPGTSPQTVGRFARPGRSAAANTITASQARAARQREARRDEQAVAAWLRELAGRPR*
Ga0126315_1057746913300010038Serpentine SoilMSLAYDAERHGRRPQPSFSTPASGRFKPGRSAPPNTISASAARAARQRESRRDQLAVAAW
Ga0126315_1110303923300010038Serpentine SoilMSLAYDAERRRPLAGTPPRTAGRFTRPGSAAAANTITASQARAARQREARRDEQAVAAWLRELAGRPR*
Ga0126309_1075661113300010039Serpentine SoilRRMSLAYDAERRRRSPTGPSTNKAGRFARPGSAAAANTITASQARAARQREARRDEQAVAAWLRELAGRPR*
Ga0126309_1100883213300010039Serpentine SoilMSLAYDAERREPQSGTKAPPPGRFGRMSGPKARNTITASQARAARQREQRRDEQAVSAWLRELAGRPR*
Ga0126308_1046479223300010040Serpentine SoilMALAYDADRHGRPLTPNGKRTDAVPSRPRAGRGPQPNSISASQARAARQRDARRDELAVAAWLRELARGS*
Ga0126311_1143379523300010045Serpentine SoilMSLAYDAERRRSGTGTPPRTASRFARPGSAAAANTITASQARAARQREARRDEQAVAAWLREL
Ga0126306_1072034023300010166Serpentine SoilMSLAYDAERRQPQPGTNAPPPRRFGRLSGPPARNTITASQARAARQREQRRDEQAVSAWLRELAGRPR*
Ga0134125_1211116813300010371Terrestrial SoilMSLAYDAERRRQSLAGPPQTSGRFPRPGTSAAANTITASQARAARQREARRDEQAVSAWLRELSGRPR*
Ga0134121_1159021713300010401Terrestrial SoilTSAPMSLAYDAERRRQSLAGPPSQSAGRFGRSGNPAAANTITASQARAARQREARRDEQAVAAWLRELAGRPR*
Ga0150985_10011357113300012212Avena Fatua RhizosphereTCALPIYDAERRRQSLAGPPSQTAGRFPRPGVTAAANTITASQARAARQREARRDEQAVAAWLRELAGRPR*
Ga0150985_11277246723300012212Avena Fatua RhizosphereMSLAYDAERSRRSLTGRSPQPGSRFARPGGVGSSPNTITASQPRAARQREARRDEQAVAAWLRELAGRPR*
Ga0150985_11700634113300012212Avena Fatua RhizosphereLAYDAERRRPTVPGTSSQTVAGRFARQAKTSAANTITASQARAARQREARRDEQAVASWLRELAGRPR*
Ga0150984_10441884613300012469Avena Fatua RhizosphereAYDAERSRRSLTGRSPQPGSRFARPGGVGSSPNTITASQARAARQREARRDEQAVAAWLRELAGRPR*
Ga0150984_11007400013300012469Avena Fatua RhizosphereDAERRRQSLAGPPSQTAGRFPRPGVTAAANTITASQARAARQREARRDEQAVAAWLRELAGRPR*
Ga0150984_11092753723300012469Avena Fatua RhizosphereMSLAYDAERRRQTLAGPPSQTAGRFGRPGTSAAANTIPASQARAARQREQRRDQQAVAAWLRELAGRPR*
Ga0164300_1110337023300012951SoilMSLDYDAERRRQSLAGPPSQTAGRFGRSGRPAAANTSTASQARAARQREARRDEQAVAAWLRELAGRPR*
Ga0164308_1150216523300012985SoilMSLAYDAERRRQSLAGPPSQTAGRFGRSGRPAAANTITASQARAARQREARRDEQAVAAWLRELAGRPR*
Ga0169967_102034923300013011RockMSLAYNAGRQGRQSPMGITVQPTRRFARPGRSVPQNTITASQARAARQREARRDQQAVSAWLRELAGRP*
Ga0163162_1277613613300013306Switchgrass RhizosphereMSLAYDAERRRQPVAGPPSQTVGRFARAGTAGTAANTIPASQARAARQREARRDEQAVAAWLRELAGRPR*
Ga0075312_102436623300014254Natural And Restored WetlandsMSRAMSLAYDAERRRRSLTGSPTQKAGRFARPGSAAANTITASQARAARQREARRDEQAVAAWLRELAGRPR*
Ga0075311_108989223300014259Natural And Restored WetlandsMSLAYDAERRRRSLTGSPTQKAGRFARPGSAAANTITASQARAARQREARRDEQAVAAWLRELAGRPR*
Ga0075322_107167423300014311Natural And Restored WetlandsMSLAYDAERRRQTLAGPPSQTAGRFGRTGGSAAANTITASQARAARQREARRDEQAVAAWLRELAGRPR*
Ga0157380_1345158913300014326Switchgrass RhizosphereRGTFVGVTSAPMSLAYDAERRRQSLAGPPSQSAGRFGRSGNPAAANTITASQARAARQREARRDEQAVAAWLRELAGRPR*
Ga0182000_1020890913300014487SoilRREPQSATKAPPPGRFGRMSGPKTRNTITASQARAARQREQRRDEQAVSAWLRELAGRPR
Ga0163161_1153167913300017792Switchgrass RhizosphereMSLAYDAERRRQSLAGPPSQSAGRFGRSGNPAAANTITASQARAARQREARRDEQAVAAWLRELAGRPR
Ga0190265_1011654923300018422SoilMSPSMSLAYDAERSRQSLTGRSTPPARFARPGSATTQTNTITASQARAARQREARRDERAVAAWLRELAGRPR
Ga0190265_1031423323300018422SoilMFLAMSLAYDAERQGRQPLRGVRPQSTGRFTRAGGPATPNTITASQARAARQREARRDQQAVSAWLRELTGRPS
Ga0190265_1060888123300018422SoilMSPKMSLAYDAERPGRQPLSGKVATAGRFARPGAGSGPNTITASQARAARQREARRDQQAVSAWLRELSGRPR
Ga0190265_1063173823300018422SoilMSLAYDAERPGRQPLTGKTAAVPRRFTRPGGPPSANTITASQARAARQREARRDEQAVAAWLRELAGRPR
Ga0190265_1195579523300018422SoilMSLAYHAERQGRQMLMGVRPQSTGRFTRTGGPAASNTITASQARAARQREARRDQQAVSAWLRELRR
Ga0190265_1220094923300018422SoilMSLAYDAERQGRQSLAGPQEKPTSRFTRGFGGVGPNTITASQARAARQREARRDQQAVSVWLRELAGRSR
Ga0190265_1225457813300018422SoilMSLAYDAERPGRQPLTGKTAAVSSRFSRPGGSRSANTITASQARAARQREARRDEQAVAAWLRELAGRPR
Ga0190265_1319763913300018422SoilMSLAYDAERPGRQPLTGKTAAAPSRFSRLGGSPVANTITASQARAARQREARRDEQAVSAWLRELAGRPR
Ga0190265_1355727213300018422SoilMSLAYDAERQGGRSSTGASTQRPGRFMRPDRSAPKNTITASQARAARQREARRDEQAVSAWLRELAGRPR
Ga0190272_1005344823300018429SoilMSLAYDAERSRQSLTGRSTPPARFARPGGSTPQTNTITASQARAARQREARRDERAVAVWLRELAGRPR
Ga0190272_1080276023300018429SoilMSLAYDAQRREPQSGTETPPPRRFGRVSSGRKARNTITASQARAARQREQRRDEQAVSAWLRELAGRPR
Ga0190272_1132882013300018429SoilMSPSMSLAYDAERSRQSLTGRSTPPSRFARTGTATPQTNTITASQARAARQREARRDERAVSAWLRELAGRPR
Ga0190275_1142147413300018432SoilMSLAYDAERQGRQLLTGVRPQSTGRFTRTGGPAASNTITASQARAARQREARRDQQAVAAWLRELRR
Ga0190268_1004368713300018466SoilMSLAYDAERSGRQPLRGKVQAPLGRFARPSGPAANTITASQARAARQREARRDEQAVSAWLRELAGRPR
Ga0190268_1008843213300018466SoilMSLAYDAQRREPQSGTETPPPARFGRVSSGRKARNTITASQARAARQREQRRDEQAVSAWLRELAGRPR
Ga0190268_1153465123300018466SoilMSLAYDAERPGRQPLTGKTAAGAMSRFSRPGGSPAANTITASQARAARQREARRDEQAVAAWLRELAGRPR
Ga0190268_1233807113300018466SoilMSLAYDAERSRRQPLTGKVTAGRFGRPGSSASPNTITASQARAARQREARRDEQAVAAWLRELSGRPR
Ga0190268_1235454513300018466SoilMSLAYDAERPGRQSLTGKAAAGAARRFPRPGGPPAANTITASQARAARQREARRDEQAVAAWLRELAGRPR
Ga0190270_1077652023300018469SoilMSLAYDAERPGRQPLTGKTAAGAMSRFSRPGGPPAANTITASQARAARQREARRDEQAVSAWLRELAGRPR
Ga0190271_1146650923300018481SoilMSLAYDAERPGRQPLGKTAVASSRFSRPGGAPAANTITASQARAARQREARRDEQAVAAWLRELAGRPR
Ga0190271_1370504123300018481SoilLFDGHFGVDGSRARGLMSASMSLAYDAERQGRQSLAGPQEKPTSRFTRGFGGVGPNTITASQARAARQREARRDQQAVSAWLRELAGRSR
Ga0190264_1014999823300019377SoilMCREMSLAYDAERRQPQPGTQAPPPGRFGRLSGSHPARNTITASQARAARQREQRRDEQAVSAWLRELSGRPR
Ga0190267_1119621523300019767SoilMCPGMSLAYDAQRREPQSGTETPPPARFGRVSSGPKARNTITASQARAARQREQRRDEQAVSAWLRELAGRPR
Ga0206356_1003826823300020070Corn, Switchgrass And Miscanthus RhizosphereMCRAMSLAYDAERRRQPLAGPPQTRGRFPRPGTAAAANTITASQARAARQREARRDEQAVSAWLRELAGRPR
Ga0196959_1009664313300021184SoilMSLAYDAERPGRSPLTGKVKSPAGRFARPGSAARPNTITASQARAARQREARRDEQAVAAWLRELAGRPR
Ga0196962_1003570413300024430SoilMSLAYDAERRRRSLTGPSTQPAGRFARPGSAAAANTITASQARAARQREARRDEQAVAAWLRELAGRPR
Ga0196962_1003737513300024430SoilMSLAYDAERPGHQPLTGKVPAPAGRFGRSGSSVRPNTITASQARAARQREARRDEQAVAAWLRELSGRPR
Ga0196962_1011446813300024430SoilMSLAYDAERPGRQPLTGKATTAPSRFARPGGRPAANTITASQARAARQREARRDEQAVAAWLRELAGRPR
Ga0207643_1109408323300025908Miscanthus RhizosphereMSLAYDAEPRRRSLTSSPTQTAGRFSRPGSAVAANTIKASQARAARQREARRDEQAVAAW
Ga0207687_1128852623300025927Miscanthus RhizosphereMSLAYDAEPRRRSLTSSPTQTAGRFSRPGSAVAANTIKASQARAARQREARRDEQAVAAWLRELAGRPR
Ga0207712_1113188613300025961Switchgrass RhizosphereMSLAYDAERRRQSLAGPPSQSAGRFGRSGNPAAANPITASQARAARQREARRDEQAVAAWLRELAGRPR
Ga0207708_1021329923300026075Corn, Switchgrass And Miscanthus RhizosphereMSLAYDAERRRQTLAGPPSQSAGRFGRPGTSAAANTIPASQARAARQREQRRDEQAVAAWLRELAGRPR
Ga0209481_1016477723300027880Populus RhizosphereMSLAYDAERRRRSLTGPSTQTAGRFARPGSTAAANTITASQARAARQREARRDEQAVSAWLRELAGRPR
Ga0207428_1002734833300027907Populus RhizosphereMSLAYDAERRRRSLTGSSTQTAGRFARPGSTAAANTITASQARAARQREARRDEQAVSAWLRELAGRPR
Ga0307301_1032334013300028719SoilMSLAYDAERRRPTVPGTSSQTVAGRFARQAKASAANTITASQARAARQREARRDEQAVAAWLRELAGRPR
Ga0307318_1021132913300028744SoilMSLAYDAERRRPRVPGTSSQTVAGRFARQAKASAANTITASQARAARQREARRDEQAVAAWLRELAGRPR
Ga0307320_1045514913300028771SoilMSARMSLAYDAERRRPTVPGTSSQTVAGRFARQAKASAANTITASQARAARQREARRDEQAVSAWLRELAGRPR
Ga0307284_1005845423300028799SoilMCPGMSLAYDAERRRLPVPGTSSQTSGRFGRPGRSAAANTITASQARAARQREARRDEQAVAAWLRELAGRPR
Ga0307310_1037814423300028824SoilMCPGMSLAYDAERRRLPVPGTSSQTSGRFGRPGRSAAANTITASQARAARQREARRDEQAVAAWLRERAGRPR
Ga0307286_1013298923300028876SoilMSLAYDAERRRPTVPGTSSQTVAGRFARQAKASAANTITASQARAARQREARRDEQAVA
Ga0307277_1004108723300028881SoilMCRAMSLAYDAERRRPRVPGMSPRTAGRFGRSGGSAAANTITASQARAARQREARRDEQAVAAWLRELAGRPR
Ga0247826_1099758613300030336SoilMSVAYDAGRQGQSLTGKAAVPAGRFGRSGSSGGRNTITASQARAARQREARRDEQAVAAWLRELSGRPR
Ga0299913_1053973523300031229SoilMSLAYNAERQGRQPLRGVRPQSTGRFVRAGDRVAPNTITASQARAARQREARRDQQAVSAWLRELRGA
Ga0307408_10008428633300031548RhizosphereMSLAYDAERRRRSLTGSSTQTAGRFARPGSAAAANTITASQARAARQREARRDEQAVAAWLRELAGRPR
Ga0307413_1024026913300031824RhizosphereMSLAYDAERREPQSATKAPPPGRFGRMSGPKTRNTITASQARAARQREQRRDEKAVSAWLRELSGRPR
Ga0307410_1161688513300031852RhizosphereMSLAYDAERRRRSLTGPSPQPAGRFARPGSAAAANTITASQARAARQREARRDEQAVSAWLRELAGRPR
Ga0307410_1213237523300031852RhizosphereRRRRSLTGSSTQTAGRFARPGSAAAANTITASQARAARQREARRDEQAVAAWLRELAGRP
Ga0307415_10129056123300032126RhizosphereMSLAYDAERRRRSLTGPSAQKAGRFARPGSTAAANTITASQARAARQREARRDQQAVSAWLRELA
Ga0268251_1021129823300032159AgaveVGVMSRAMPLGHDTERRHRPGIGKPLQQSGRFARPGSSAAPNTITASQARAARQREARRDEQAVAAWLRELAGRPR

 ⦗Top⦘


Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.