Metagenome Family F075277

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F075277
Family Type	Metagenome
Number of Sequences	119
Average Sequence Length	42 residues
Representative Sequence	ALATWYGVLHQDIRKILDEVGPQQQPVIAPSVGDALHARG
Number of Associated Samples	93
Number of Associated Scaffolds	119

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	0.00 %
% of genes near scaffold ends (potentially truncated)	97.48 %
% of genes from short scaffolds (< 2000 bps)	89.08 %
Associated GOLD sequencing projects	88
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.35

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Bacteria (77.311 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (55.462 % of family members)
Environment Ontology (ENVO)	Unclassified (68.908 % of family members)
Earth Microbiome Project Ontology (EMPO)	Unclassified (56.303 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 35.29% β-sheet: 0.00% Coil/Unstructured: 64.71%
Feature Viewer

Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.35
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.35
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 119 Family Scaffolds
PF02321	OEP	52.10
PF03976	PPK2	10.08
PF13533	Biotin_lipoyl_2	1.68
PF13847	Methyltransf_31	0.84
PF13637	Ank_4	0.84
PF00365	PFK	0.84
PF00924	MS_channel	0.84
PF00892	EamA	0.84

COG ID	Name	Functional Category	% Frequency in 119 Family Scaffolds
COG1538	Outer membrane protein TolC	Cell wall/membrane/envelope biogenesis [M]	104.20
COG2326	Polyphosphate kinase 2, PPK2 family	Energy production and conversion [C]	10.08
COG0205	6-phosphofructokinase	Carbohydrate transport and metabolism [G]	0.84
COG0668	Small-conductance mechanosensitive channel	Cell wall/membrane/envelope biogenesis [M]	0.84
COG3264	Small-conductance mechanosensitive channel MscK	Cell wall/membrane/envelope biogenesis [M]	0.84

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	77.31 %
Unclassified	root	N/A	22.69 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	77.31 %
Unclassified	root	N/A	22.69 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	77.31 %
Unclassified	root	N/A	22.69 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	71.43 %
Unclassified	root	N/A	22.69 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	66.39 %
Unclassified	root	N/A	22.69 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	2.52 %

Name	Rank	Taxonomy	Distribution
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	52.94 %
Unclassified	root	N/A	22.69 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	9.24 %
Enterobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales	2.52 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.84 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	52.94 %
Unclassified	root	N/A	22.69 %
Acetobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	8.40 %
Enterobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales	2.52 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.84 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300004080\|Ga0062385_11189370	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	521	Open in IMG/M
3300005764\|Ga0066903_108963646	All Organisms → cellular organisms → Bacteria → Proteobacteria	507	Open in IMG/M
3300005843\|Ga0068860_101519956	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	691	Open in IMG/M
3300006172\|Ga0075018_10529834	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	618	Open in IMG/M
3300006175\|Ga0070712_100842225	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	788	Open in IMG/M
3300006176\|Ga0070765_100256042	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1606	Open in IMG/M
3300006176\|Ga0070765_101277682	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	692	Open in IMG/M
3300006176\|Ga0070765_101690702	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	594	Open in IMG/M
3300006954\|Ga0079219_11521259	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	607	Open in IMG/M
3300007258\|Ga0099793_10252716	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	851	Open in IMG/M
3300009792\|Ga0126374_11722105	Not Available	522	Open in IMG/M
3300010358\|Ga0126370_11571801	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	628	Open in IMG/M
3300010361\|Ga0126378_12876742	Not Available	549	Open in IMG/M
3300010362\|Ga0126377_11112035	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	859	Open in IMG/M
3300010362\|Ga0126377_13002815	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales	544	Open in IMG/M
3300010366\|Ga0126379_11229036	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	855	Open in IMG/M
3300010376\|Ga0126381_100112169	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	3509	Open in IMG/M
3300012363\|Ga0137390_10789728	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	908	Open in IMG/M
3300016341\|Ga0182035_11594159	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	589	Open in IMG/M
3300016357\|Ga0182032_11471610	Not Available	591	Open in IMG/M
3300016357\|Ga0182032_12060979	Not Available	501	Open in IMG/M
3300016371\|Ga0182034_10181665	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1611	Open in IMG/M
3300016371\|Ga0182034_10742476	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	837	Open in IMG/M
3300016371\|Ga0182034_11734830	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	550	Open in IMG/M
3300016387\|Ga0182040_10575334	Not Available	909	Open in IMG/M
3300016404\|Ga0182037_10038664	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	3100	Open in IMG/M
3300016404\|Ga0182037_10458687	Not Available	1061	Open in IMG/M
3300016422\|Ga0182039_10290650	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1350	Open in IMG/M
3300016445\|Ga0182038_10414724	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1132	Open in IMG/M
3300018060\|Ga0187765_10237647	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1068	Open in IMG/M
3300018062\|Ga0187784_10715780	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	801	Open in IMG/M
3300019789\|Ga0137408_1250979	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	716	Open in IMG/M
3300020199\|Ga0179592_10073495	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1566	Open in IMG/M
3300020580\|Ga0210403_10204778	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1619	Open in IMG/M
3300021181\|Ga0210388_10825890	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	802	Open in IMG/M
3300021433\|Ga0210391_11002885	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	650	Open in IMG/M
3300021439\|Ga0213879_10121812	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	743	Open in IMG/M
3300021560\|Ga0126371_12229547	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	661	Open in IMG/M
3300021560\|Ga0126371_13860436	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	505	Open in IMG/M
3300025916\|Ga0207663_10313585	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1176	Open in IMG/M
3300026557\|Ga0179587_10391995	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	904	Open in IMG/M
3300027605\|Ga0209329_1001470	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	3460	Open in IMG/M
3300028906\|Ga0308309_10582768	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	970	Open in IMG/M
3300031231\|Ga0170824_118575101	Not Available	512	Open in IMG/M
3300031543\|Ga0318516_10767663	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales	545	Open in IMG/M
3300031544\|Ga0318534_10112144	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1565	Open in IMG/M
3300031545\|Ga0318541_10598310	Not Available	617	Open in IMG/M
3300031546\|Ga0318538_10823592	Not Available	504	Open in IMG/M
3300031549\|Ga0318571_10019743	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1748	Open in IMG/M
3300031561\|Ga0318528_10474024	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	672	Open in IMG/M
3300031572\|Ga0318515_10131463	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1327	Open in IMG/M
3300031572\|Ga0318515_10767150	Not Available	509	Open in IMG/M
3300031713\|Ga0318496_10615961	All Organisms → cellular organisms → Bacteria	600	Open in IMG/M
3300031736\|Ga0318501_10208063	Not Available	1026	Open in IMG/M
3300031747\|Ga0318502_10429750	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	787	Open in IMG/M
3300031748\|Ga0318492_10626755	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	574	Open in IMG/M
3300031753\|Ga0307477_10224245	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1304	Open in IMG/M
3300031754\|Ga0307475_11554708	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales	506	Open in IMG/M
3300031764\|Ga0318535_10342418	Not Available	668	Open in IMG/M
3300031765\|Ga0318554_10267221	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	974	Open in IMG/M
3300031768\|Ga0318509_10597923	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	614	Open in IMG/M
3300031770\|Ga0318521_10839909	All Organisms → cellular organisms → Bacteria	560	Open in IMG/M
3300031771\|Ga0318546_10053731	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2518	Open in IMG/M
3300031779\|Ga0318566_10193570	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1009	Open in IMG/M
3300031781\|Ga0318547_10078932	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1839	Open in IMG/M
3300031781\|Ga0318547_11037924	All Organisms → cellular organisms → Bacteria → Proteobacteria	513	Open in IMG/M
3300031792\|Ga0318529_10457682	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	594	Open in IMG/M
3300031798\|Ga0318523_10074498	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1636	Open in IMG/M
3300031805\|Ga0318497_10035543	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2509	Open in IMG/M
3300031821\|Ga0318567_10232496	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1033	Open in IMG/M
3300031821\|Ga0318567_10423966	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	754	Open in IMG/M
3300031831\|Ga0318564_10182084	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	936	Open in IMG/M
3300031835\|Ga0318517_10507398	All Organisms → cellular organisms → Bacteria → Proteobacteria	543	Open in IMG/M
3300031846\|Ga0318512_10048271	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1892	Open in IMG/M
3300031846\|Ga0318512_10710729	Not Available	515	Open in IMG/M
3300031859\|Ga0318527_10183120	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	884	Open in IMG/M
3300031860\|Ga0318495_10203612	Not Available	891	Open in IMG/M
3300031860\|Ga0318495_10245407	Not Available	802	Open in IMG/M
3300031879\|Ga0306919_10076431	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2296	Open in IMG/M
3300031879\|Ga0306919_10248317	Not Available	1338	Open in IMG/M
3300031880\|Ga0318544_10139136	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	927	Open in IMG/M
3300031893\|Ga0318536_10573036	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	565	Open in IMG/M
3300031896\|Ga0318551_10062473	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1908	Open in IMG/M
3300031897\|Ga0318520_10243581	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1071	Open in IMG/M
3300031897\|Ga0318520_10670832	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	647	Open in IMG/M
3300031910\|Ga0306923_11525354	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	698	Open in IMG/M
3300031912\|Ga0306921_10104945	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3278	Open in IMG/M
3300031941\|Ga0310912_10275469	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1299	Open in IMG/M
3300031941\|Ga0310912_10291942	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1261	Open in IMG/M
3300031942\|Ga0310916_10184347	Not Available	1740	Open in IMG/M
3300031945\|Ga0310913_10442442	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	923	Open in IMG/M
3300031947\|Ga0310909_10869415	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	742	Open in IMG/M
3300031947\|Ga0310909_11294928	All Organisms → cellular organisms → Bacteria	586	Open in IMG/M
3300031947\|Ga0310909_11604658	All Organisms → cellular organisms → Bacteria	516	Open in IMG/M
3300031954\|Ga0306926_10242347	All Organisms → cellular organisms → Bacteria	2235	Open in IMG/M
3300031959\|Ga0318530_10497002	All Organisms → cellular organisms → Bacteria	507	Open in IMG/M
3300031959\|Ga0318530_10509811	Not Available	500	Open in IMG/M
3300031981\|Ga0318531_10165659	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	992	Open in IMG/M
3300031981\|Ga0318531_10389028	Not Available	631	Open in IMG/M
3300031981\|Ga0318531_10532887	All Organisms → cellular organisms → Bacteria	532	Open in IMG/M
3300032001\|Ga0306922_10548814	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1229	Open in IMG/M
3300032001\|Ga0306922_10976126	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	876	Open in IMG/M
3300032010\|Ga0318569_10243565	Not Available	835	Open in IMG/M
3300032043\|Ga0318556_10073353	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1697	Open in IMG/M
3300032052\|Ga0318506_10001506	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	5993	Open in IMG/M
3300032055\|Ga0318575_10217799	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	960	Open in IMG/M
3300032059\|Ga0318533_10373137	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1040	Open in IMG/M
3300032059\|Ga0318533_11077699	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	589	Open in IMG/M
3300032059\|Ga0318533_11343094	Not Available	522	Open in IMG/M
3300032064\|Ga0318510_10385301	Not Available	595	Open in IMG/M
3300032066\|Ga0318514_10258366	Not Available	918	Open in IMG/M
3300032066\|Ga0318514_10656230	Not Available	558	Open in IMG/M
3300032068\|Ga0318553_10228889	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	970	Open in IMG/M
3300032090\|Ga0318518_10224656	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	963	Open in IMG/M
3300032205\|Ga0307472_100098830	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2001	Open in IMG/M
3300033290\|Ga0318519_10208386	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1117	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	99.16%
Host-Associated	Host-Associated	0.84%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	97.48%
Aquatic	Environmental → Aquatic	1.68%
Plants	Host-Associated → Plants	0.84%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	97.48%
Freshwater	Environmental → Aquatic → Freshwater	0.84%
Sediment	Environmental → Aquatic → Sediment	0.84%
Rhizoplane	Host-Associated → Plants → Rhizoplane	0.84%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	89.08%
Loam	Environmental → Terrestrial → Soil → Loam	6.72%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	1.68%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	0.84%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.84%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	0.84%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	74.79%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	13.45%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	5.04%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	1.68%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	1.68%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	0.84%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.84%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.84%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	0.84%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	55.46%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	15.97%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	8.40%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	4.20%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	3.36%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	2.52%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	1.68%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	1.68%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	0.84%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.84%
Bulk Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Bulk Soil	0.84%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.84%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.84%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.84%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	0.84%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.84%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300004080	Coassembly of ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005843	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2	Host-Associated	Open in IMG/M
3300006172	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2014	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300006954	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control	Environmental	Open in IMG/M
3300007258	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3	Environmental	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300012363	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaG	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300018060	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_10_MG	Environmental	Open in IMG/M
3300018062	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300019789	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300020199	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300021181	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-O	Environmental	Open in IMG/M
3300021433	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-O	Environmental	Open in IMG/M
3300021439	Vellozia epidendroides bulk soil microbial communities from rupestrian grasslands, the National Park of Serra do Cipo, Brazil - BS_R03	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300025916	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300026557	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal	Environmental	Open in IMG/M
3300027605	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_M3 (SPAdes)	Environmental	Open in IMG/M
3300028906	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031544	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f26	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031546	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f23	Environmental	Open in IMG/M
3300031549	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f24	Environmental	Open in IMG/M
3300031561	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f26	Environmental	Open in IMG/M
3300031564	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f21	Environmental	Open in IMG/M
3300031572	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f19	Environmental	Open in IMG/M
3300031713	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f22	Environmental	Open in IMG/M
3300031736	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f21	Environmental	Open in IMG/M
3300031747	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f22	Environmental	Open in IMG/M
3300031748	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f22	Environmental	Open in IMG/M
3300031753	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_515	Environmental	Open in IMG/M
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental	Open in IMG/M
3300031764	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f27	Environmental	Open in IMG/M
3300031765	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f22	Environmental	Open in IMG/M
3300031768	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f22	Environmental	Open in IMG/M
3300031770	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f17	Environmental	Open in IMG/M
3300031771	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19	Environmental	Open in IMG/M
3300031779	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f22	Environmental	Open in IMG/M
3300031781	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f20	Environmental	Open in IMG/M
3300031792	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f23	Environmental	Open in IMG/M
3300031798	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f19	Environmental	Open in IMG/M
3300031805	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f23	Environmental	Open in IMG/M
3300031821	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f20	Environmental	Open in IMG/M
3300031831	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f20	Environmental	Open in IMG/M
3300031835	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f21	Environmental	Open in IMG/M
3300031846	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f19	Environmental	Open in IMG/M
3300031859	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f25	Environmental	Open in IMG/M
3300031860	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f25	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031880	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f25	Environmental	Open in IMG/M
3300031893	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f28	Environmental	Open in IMG/M
3300031896	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f19	Environmental	Open in IMG/M
3300031897	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f16	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300031959	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f24	Environmental	Open in IMG/M
3300031981	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f25	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032010	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f22	Environmental	Open in IMG/M
3300032043	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f24	Environmental	Open in IMG/M
3300032052	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f19	Environmental	Open in IMG/M
3300032055	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f23	Environmental	Open in IMG/M
3300032059	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27	Environmental	Open in IMG/M
3300032064	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f17	Environmental	Open in IMG/M
3300032066	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f18	Environmental	Open in IMG/M
3300032068	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f21	Environmental	Open in IMG/M
3300032090	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f22	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300033290	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f15	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0062385_111893701	3300004080	Bog Forest Soil	LATWYRLLHEDIRKILDEVGPEPLLRVAPSVGDPLHAAG*
Ga0066903_1089636462	3300005764	Tropical Forest Soil	SGRCEHLTALATWYRLLHQDIREILDQVGPQPQPAIAPPVGDVLHAAG*
Ga0068860_1015199562	3300005843	Switchgrass Rhizosphere	ATWYGVLHQGIRKILDEVAPQPQSVIEPSGGDPLHATG*
Ga0075018_105298342	3300006172	Watersheds	TWYGVLHQDIRKILDEIGPQPQSVIEPSVGDALHATG*
Ga0070712_1008422251	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	YRLLHEDIRKILDEVGPQPQLPITPSFGDALHATG*
Ga0070765_1002560421	3300006176	Soil	DHLAAFATWYRLLHEDIRKILDEVGPQPQLPITPSFGDALHATG*
Ga0070765_1012776822	3300006176	Soil	ATWYRLLHEDIRKILDEVGPQPQLPIMPSFGDALHATG*
Ga0070765_1016907022	3300006176	Soil	DHLAAFATWYRLLHEDIRKILDEVGPQPQLPITPSFGDAFHATG*
Ga0079219_115212592	3300006954	Agricultural Soil	HLTALATWYGVLHHDIRKILDEVGPQPRPVTAPSVGDAFHATG*
Ga0099793_102527161	3300007258	Vadose Zone Soil	AAWYGVLHQDIRKILDEVGPQPRPVIAPSVEDALHASG*
Ga0126374_117221051	3300009792	Tropical Forest Soil	NRRPYDQLTALATWYGVLHHDIRKILDEVGPQLHPMTSPSVEDALHATG*
Ga0126380_102025642	3300010043	Tropical Forest Soil	WYGLLHQDIRNILDEAGPQPQRPIPSPAGEALHAVR*
Ga0126370_115718012	3300010358	Tropical Forest Soil	QLTALATWYGVLHQDSRKILDEVGPQLHPMTSPSVEDALHATG*
Ga0126378_128767422	3300010361	Tropical Forest Soil	LATWYRLLHEDIRKILDEVGPQPQPLIAPPVGDALHAAG*
Ga0126377_111120351	3300010362	Tropical Forest Soil	LTALATWYGVLHEDIRNILDEVGPQPGPVMAPSVGDALHATG*
Ga0126377_130028152	3300010362	Tropical Forest Soil	DHLAALATWYGVLHQDIRKILDEVGPRRQTVIEPSVVDPLHAAG*
Ga0126379_112290361	3300010366	Tropical Forest Soil	LSGPGDHLTALATWYGVLHQDIRKILDEVGPRRQTVIEPSVVDPLHAAG*
Ga0126381_1001121694	3300010376	Tropical Forest Soil	LATWYGVLHQDIRKILDEVGPQATPLVPQPVRDAWHAAG*
Ga0137390_107897281	3300012363	Vadose Zone Soil	WYGVLHQDIRKILDEVGPQPRPVIAPSVGDVFHATG*
Ga0182035_115941592	3300016341	Soil	SLAMWYGLLHQDIRKILDEVGPQATPLVPQPVRDAWHAAG
Ga0182032_114716101	3300016357	Soil	GPGDHLTALATWYGLLHQDIRKILDEVGPEATPLIPQPVGDALHAAG
Ga0182032_120609792	3300016357	Soil	ILSGPGDQLTALATWYGLLHQDIRRILDEVGPRRDPVIAPSVGRALHAAG
Ga0182034_101816652	3300016371	Soil	LSGPGDHLTALATWYGVLHQDIRKILDEVGPQATPLVPQPVRDVWHAAG
Ga0182034_107424761	3300016371	Soil	TWYGLLHQDIRKILDEVGPEATPLIPQPVGDALHAAG
Ga0182034_117348302	3300016371	Soil	TALTTWYGVLHQDIRKILNEVGPQPQAVLTPWVEDVLHAVG
Ga0182040_105753341	3300016387	Soil	TALATWYGLLHQDIRKILDEVGPEATPLIQQPVGDALHAAG
Ga0182037_100386641	3300016404	Soil	TWYRVLHEDIREILDKVGPQPQPLIAPSVGDALHATG
Ga0182037_104586871	3300016404	Soil	DHLTALATWYGLLHQDIRNVLDEVGPRRPPMIEPSVGDALHAAG
Ga0182037_108980121	3300016404	Soil	ALATWYGLLHQDIRNILDKVGPEPQPVKVPSVGDALHATG
Ga0182039_102906501	3300016422	Soil	TWYGVLHEDIRKILDEVGPQPRPMTAPVGAALHATG
Ga0182038_104147242	3300016445	Soil	LATWYGLLHQDIRKILDEVGPQATPLIPQPVGDALHAAG
Ga0187765_102376471	3300018060	Tropical Peatland	GDRLMALATWYGVLHNDIVKILDEVGPQSKAVTAPSIGDALHAAG
Ga0187784_107157801	3300018062	Tropical Peatland	PDDPLTALAAWHGLLHQDIRNILDEVGPQPQPTTAPSLGEALRAAG
Ga0137408_12509792	3300019789	Vadose Zone Soil	TWYGVLHHDIRKILDEVGPQPRPVIAPSVGDAFHATG
Ga0179592_100734952	3300020199	Vadose Zone Soil	GPGDHLTALATWYGVLHQDIRKILDEVGPQPQPVIAPPVGDAFHAAG
Ga0210403_102047782	3300020580	Soil	DPGDHLTALATWYGVLHQDIRKILDEVGPQPQPVIAPSVGDAVHAAG
Ga0210388_108258902	3300021181	Soil	PPLSGPGDHLAAFATWYRLLHEDIRKILDEVGPQPQLPITPSFGDALHATG
Ga0210391_110028852	3300021433	Soil	AFTTWYRLLHEDIRKILDEVGPQPQLPITPSFGDALHATG
Ga0213879_101218122	3300021439	Bulk Soil	ATWYRLLHQDIREILGQVGPQPQPMIAPSVRDPLHADG
Ga0126371_122295472	3300021560	Tropical Forest Soil	LATWYRLLHEDIRKILDEVGPQPQPLIAPSVGDALHAAG
Ga0126371_138604361	3300021560	Tropical Forest Soil	TWYGLLYQDIRRILDQVGPQPQPVTATSVRDALHAAG
Ga0207663_103135852	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	AAFATWYRLLHEDIRKILDEVGPQPQLPITPSFGDALHATG
Ga0179587_103919951	3300026557	Vadose Zone Soil	RTALATWYGVLHQDIRRILDEVGPQPQPVIAPPVGDAFHAAG
Ga0209329_10014704	3300027605	Forest Soil	LAAFATWYRLLHEDIRKILDEVGPQPQLPITPSFGDALHATG
Ga0308309_105827681	3300028906	Soil	HFTALARWYRLLHEDIRKILDEVGPQPQLPIMPSFGDALHATG
Ga0170824_1185751011	3300031231	Forest Soil	PGDHLTALATWYGMLHQDICKILDEVGPQPQPIAPPVGDGFRAIG
Ga0318516_107676632	3300031543	Soil	LTALATWYGLLHQDIRKILDEVGPEATPLIPQPVGDALHAAG
Ga0318534_101121441	3300031544	Soil	EPPILTGPGDHLTALATWYGLLHQDIRKILDEVGPEATPLIPQPVGDALHAAG
Ga0318541_105983101	3300031545	Soil	SDDHLIAFATWYGVLHEDIRKILDEIGPQPQPAIAQSVTDALRAAG
Ga0318538_108235921	3300031546	Soil	TWYGLLHQDIRNVLDEVGPRRPPMIEPSVGDALHAAG
Ga0318571_100197431	3300031549	Soil	PGDHLTALATWYGLLHQDIRKILDEVGPRRQPVIEPSVGDALHAAG
Ga0318528_104740242	3300031561	Soil	GDHLTALATWYGVLHQDIRKILDEVGPQPRLVAAPSVGEALHAAG
Ga0318573_104955421	3300031564	Soil	AALATWYGLLHQDIRNILDKVGPEPQPVKVPSVGDALHAAG
Ga0318515_101314631	3300031572	Soil	LATWYHLLHGDIRKILDEVGPQSPPVTSPSVRNALHAAG
Ga0318515_107671502	3300031572	Soil	VLSGPGDHLTALATWYGLLHQDIRKILDEVGPEATPLIPQPVGDALHAAG
Ga0318496_106159611	3300031713	Soil	TWYGVLHEDIRKILDEVGPQPRPAIARPVADALHAAG
Ga0318501_102080631	3300031736	Soil	YGLLHQDIRSILDEVGPQPQPVIAPSVGGALHAAG
Ga0318502_104297502	3300031747	Soil	GDHLTALATWYGLLHQDIRKILDEVGPEATPLIPQPVGDALHAAG
Ga0318492_106267552	3300031748	Soil	LALATWYGVLHQDIRSILDEVGPQPQPVTAPPVRDALHAAR
Ga0307477_102242452	3300031753	Hardwood Forest Soil	AAFATWYRLLHEDIRKILDEVGPRPQLPITPSFGDALHATG
Ga0307475_115547081	3300031754	Hardwood Forest Soil	YRLLHEDIRKILDEVGPQPQLPITPSFGDAFHATG
Ga0318535_103424181	3300031764	Soil	TGPGDHLTALATWYGLLHQDIRKILDEVGPEATPLIQQPVGDALHAAG
Ga0318554_102672212	3300031765	Soil	GPGDHLTALATWYGVLRQDIRNILDEVGPQPRPVIARSVADALHAAG
Ga0318509_105979232	3300031768	Soil	LILTGPGDQFTALATWYGVLHRDIRKILDEVGPQATPLVPHPVGDALRAAG
Ga0318521_108399092	3300031770	Soil	GPGDHLTALATWYGVLHQDIRKVLDEVGPQRQPVIEPSVGDALHAAG
Ga0318546_100537311	3300031771	Soil	LATWHGVLHEDIRKILDQVGPQPQPARAPVGDALHAAG
Ga0318566_101935702	3300031779	Soil	YRLLHEDIREILDEVGPQPQPLTAQSVGDALHAAG
Ga0318547_100789323	3300031781	Soil	YGVLHQDIRSILDEVGPQPQPVTVPSVGDALHATG
Ga0318547_110379241	3300031781	Soil	PTLSGRGDHLTALATWYGVLHQDIRKILDEVGPQQQPVIAPSVGDALHARG
Ga0318529_104576822	3300031792	Soil	GDHLTALATWYGVLRQDIRNILDEVGPQPRPVIVRSVADALHAAG
Ga0318523_100744981	3300031798	Soil	TALATWYGLLHQDIRKILDEVGPQPQPLMAQPVGDALHAAG
Ga0318497_100355431	3300031805	Soil	YGLLHQDIHKILDEVGPEATPLIQQPVGDALHAAG
Ga0318567_102324961	3300031821	Soil	ATWYGVLHQDIRRILDEVGPQPQPGIEPSVRDALHAAG
Ga0318567_104239662	3300031821	Soil	DHLAALATWYHLLHGDIRKILDEVGPQSPPVTSPSVRNALHAAG
Ga0318564_101820842	3300031831	Soil	GDQLAALATWYRVLHQDIRKILDEVGPQPVNAPSVGDPLHAAG
Ga0318517_105073981	3300031835	Soil	HLTALATWYGVLHQDIRKILDEVGPQQQPVIAPSVGDALHARG
Ga0318512_100482711	3300031846	Soil	GDHLTALATWYGVLHQDVRNILDEVGPQPRPVTEPPVGDALHAAG
Ga0318512_107107292	3300031846	Soil	TWYGVLHQDIRKVLDEVGPQRQPVIEPSVGDALHAAG
Ga0318527_101831201	3300031859	Soil	SGPGDHLTALATWYGLLHQDIRKILDEVGPEATPLIPQPVGDALHAAG
Ga0318495_102036122	3300031860	Soil	TTALATWYGVLHQDIRKVLDEVGPQRQPVIEPSVGDALHAAG
Ga0318495_102454072	3300031860	Soil	AFATWYGLLHQDIRKILDEVGPEATPLIQQPVGDALHAAG
Ga0306919_100764313	3300031879	Soil	TALATWHGVLHEDIRKILDQVGPQPQPARAPVGDALHAGG
Ga0306919_102483174	3300031879	Soil	SGVLHQDIRKILDEVGPQRQPVIEPSVGDALHAAG
Ga0318544_101391361	3300031880	Soil	MLSGRGDQLTALATWYGVLHEDIRKILDEVGPQPRPMTAPVGAALHATG
Ga0318536_105730362	3300031893	Soil	WYRVLHEDIREILDKVGPQPQPLIAPSVGDALHATG
Ga0318551_100624734	3300031896	Soil	LAALATWYHLLHGDIRKILDEVGPQSPPVTSPSVRNALHAAG
Ga0318520_102435812	3300031897	Soil	TWYGVLHQDIRKILNEVGPQPQAVLTPLVEDVLHAVG
Ga0318520_106708322	3300031897	Soil	GDHQTALVTWYGLLHQDIRKILDDVGPRRQPATAPPVGDALHAAG
Ga0306923_115253541	3300031910	Soil	WYRLLHEDIRKILDEVGPQPQSVIAPSVRDALDAAG
Ga0306921_101049451	3300031912	Soil	ILTGPGDQFTALATWYGVLHRDIRKILDEVGPQATPLVPHPVGDALRAAG
Ga0310912_102754691	3300031941	Soil	DHLTALATWYGLLHQDIRKILDEVGPEATPLIPQPVGDALHAAG
Ga0310912_102919421	3300031941	Soil	DQLAALATWYRVLHQDIRKILDEVGPQPVNAPSVGDPLHAAG
Ga0310916_101843472	3300031942	Soil	EPPILSGPGDHLTALATWYGLLHQDIRKILNEVGPQSQPVTVPPVGDALHATG
Ga0310913_104424422	3300031945	Soil	DHLTALTTWYGVLHQDIRKILNEVGPQPQAVLTPWVEDVLHAVG
Ga0310909_108694152	3300031947	Soil	ALATWYGLLHQDIRRILDEVGPRRDPVIAPSVGRALHAAG
Ga0310909_112949281	3300031947	Soil	QGDHLTALATWYGLLHQDFRKVLDEIGPQTQPAIAQSVADALHAAG
Ga0310909_116046581	3300031947	Soil	LTTWYRLLHEDICEILDQVGPQPQSVTAPSVGDALHAAG
Ga0306926_102423471	3300031954	Soil	ATWFDLLHQDIRSILDEVGPQPQPVIAPSVGGALHAAG
Ga0318530_104970022	3300031959	Soil	ALATWYGVLHQDIRKILDEVGPQQQPVIAPSVGDALHARG
Ga0318530_105098112	3300031959	Soil	TWYGVLHQDIRRILDEVGPQPQPGIEPSVRDALHAAG
Ga0318531_101656591	3300031981	Soil	HLTGLATWYGLLHQDIRKILDEVGPQATPLIPQPVGDALHAAG
Ga0318531_103890282	3300031981	Soil	CYGVLYQDIRNILDEVGPQPQALIASSFGNALHRTG
Ga0318531_105328871	3300031981	Soil	LTALATWYGLLHQDIRKILDEVGPQATPLIPQPVGDALHVIS
Ga0306922_105488142	3300032001	Soil	LAAWHGVLHQDIRNILDEVGPQPHRATAPSVEDALHAAG
Ga0306922_109761262	3300032001	Soil	YGLLHQDIRRILDEIGPQPQPAATPSLGDAFHALG
Ga0318569_102435651	3300032010	Soil	GDHLTALATWYGLLHQDIRSILDEVGPQPQPVIAPSVGGALHAAG
Ga0318556_100733531	3300032043	Soil	GDHLAALATWYHLLHGDIRKILDEVGPQSPPVTSPSVRNALHAAG
Ga0318506_100015061	3300032052	Soil	DHLTALATWYGVLHQDIRKILDEVGPQATPLVPQPVRDVWHAAG
Ga0318575_102177991	3300032055	Soil	AEPPTLSGAGDHLAALATWYHLLHGDIRKILDEVGPQSPPVTSPSVRNALHAAG
Ga0318533_103731371	3300032059	Soil	GDHLTGLATWYGLLHQDIRKILDEVGPQATPLIPQPVGDALHAAG
Ga0318533_110776992	3300032059	Soil	WYRLLHEDIRNILDEVGPQPQPAIARSVGDALHAAG
Ga0318533_113430941	3300032059	Soil	GPGDHLAALATWYGVLHRDIRNILDEVGPQPHRATAPPVEDALHATG
Ga0318510_103853012	3300032064	Soil	ALATWYGLLHQDIRKILDEVGPEATPLIQQPVGDALHAAG
Ga0318514_102583663	3300032066	Soil	SGVLHQDIRKILDEGGPQRQPVIEPSVGDALHAAG
Ga0318514_106562302	3300032066	Soil	SGPGDHLTALATWYGLLHQDIRNILNEVGPQPHLVTAPSVREALHAAG
Ga0318553_102288892	3300032068	Soil	GDHLTALATWYGVLHQDICKILEEVGPQPRPVTAPSVGDALHAAG
Ga0318518_102246561	3300032090	Soil	GPAEPPTLSGAGDHLAALATWYHLLHGDIRKILDEVGPQSPPVTSPSVRNALHAAG
Ga0307472_1000988301	3300032205	Hardwood Forest Soil	PGDYLTALATWYGLLHEDIRKIIDVVDPQSQPVTSPSVRNSLHAAG
Ga0318519_102083862	3300033290	Soil	ATWYHLLHGDIRKILDEVGPQSPPVTSPSVRNALHAAG

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F075277

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences