Metagenome / Metatranscriptome Family F075274

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F075274
Family Type	Metagenome / Metatranscriptome
Number of Sequences	119
Average Sequence Length	93 residues
Representative Sequence	MTRSSDRNNGSQATLRRNRSEQSAERLAPADALRQEAVYVGMKLIPWGDVWKSLRTARFRGNGEMIEVFYDTLFKEAVFDDRGAWSLERRRLH
Number of Associated Samples	100
Number of Associated Scaffolds	119

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	73.11 %
% of genes near scaffold ends (potentially truncated)	32.77 %
% of genes from short scaffolds (< 2000 bps)	85.71 %
Associated GOLD sequencing projects	90
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.32

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Bacteria (98.319 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere (11.765 % of family members)
Environment Ontology (ENVO)	Unclassified (24.370 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (31.092 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 15.70% β-sheet: 10.74% Coil/Unstructured: 73.55%
Feature Viewer

Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.32
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.32
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 119 Family Scaffolds
PF13229	Beta_helix	3.36
PF09084	NMT1	1.68
PF13379	NMT1_2	1.68
PF00589	Phage_integrase	1.68
PF00072	Response_reg	0.84
PF02776	TPP_enzyme_N	0.84
PF02416	TatA_B_E	0.84
PF04392	ABC_sub_bind	0.84
PF14907	NTP_transf_5	0.84
PF04828	GFA	0.84
PF12399	BCA_ABC_TP_C	0.84
PF00005	ABC_tran	0.84

COG ID	Name	Functional Category	% Frequency in 119 Family Scaffolds
COG0715	ABC-type nitrate/sulfonate/bicarbonate transport system, periplasmic component	Inorganic ion transport and metabolism [P]	1.68
COG4521	ABC-type taurine transport system, periplasmic component	Inorganic ion transport and metabolism [P]	1.68
COG1826	Twin-arginine protein secretion pathway components TatA and TatB	Intracellular trafficking, secretion, and vesicular transport [U]	0.84
COG2984	ABC-type uncharacterized transport system, periplasmic component	General function prediction only [R]	0.84
COG3791	Uncharacterized conserved protein	Function unknown [S]	0.84

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	98.32 %
Unclassified	root	N/A	1.68 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	98.32 %
Unclassified	root	N/A	1.68 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	98.32 %
Unclassified	root	N/A	1.68 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	31.09 %
Unclassified	root	N/A	1.68 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.84 %
Bacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis	0.84 %

Name	Rank	Taxonomy	Distribution
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	29.41 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1.68 %
Unclassified	root	N/A	1.68 %
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	0.84 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	0.84 %

Name	Rank	Taxonomy	Distribution
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	29.41 %
Unclassified	root	N/A	1.68 %
Candidatus Rokubacteria	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	0.84 %
Bacilli	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli	0.84 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.84 %
Nitrosomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales	0.84 %

Name	Rank	Taxonomy	Distribution
unclassified Deltaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria	28.57 %
Unclassified	root	N/A	1.68 %
Usitatibacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Usitatibacteraceae	0.84 %
Bacillales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales	0.84 %
Candidatus Rokubacteria	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	0.84 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.84 %

Name	Rank	Taxonomy	Distribution
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	28.57 %
Unclassified	root	N/A	1.68 %
Bacillaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Bacillaceae	0.84 %
Usitatibacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Usitatibacteraceae → Usitatibacter	0.84 %
Candidatus Rokubacteria	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	0.84 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.84 %

Name	Rank	Taxonomy	Distribution
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	28.57 %
Unclassified	root	N/A	1.68 %
Usitatibacter palustris	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Usitatibacteraceae → Usitatibacter → Usitatibacter palustris	0.84 %
Domibacillus	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Bacillaceae → Domibacillus	0.84 %
Candidatus Rokubacteria	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	0.84 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.84 %

Name	Rank	Taxonomy	Distribution
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	28.57 %
Unclassified	root	N/A	1.68 %
Domibacillus tundrae	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Bacillaceae → Domibacillus → Domibacillus tundrae	0.84 %
Usitatibacter palustris	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Usitatibacteraceae → Usitatibacter → Usitatibacter palustris	0.84 %
Candidatus Rokubacteria	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	0.84 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.84 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000364\|INPhiseqgaiiFebDRAFT_101292846	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	777	Open in IMG/M
3300000559\|F14TC_100324421	All Organisms → cellular organisms → Bacteria	1376	Open in IMG/M
3300000597\|AF_2010_repII_A1DRAFT_10027362	All Organisms → cellular organisms → Bacteria	1548	Open in IMG/M
3300000655\|AF_2010_repII_A100DRAFT_1060515	All Organisms → cellular organisms → Bacteria	671	Open in IMG/M
3300000789\|JGI1027J11758_12281883	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	662	Open in IMG/M
3300000789\|JGI1027J11758_12834453	All Organisms → cellular organisms → Bacteria	694	Open in IMG/M
3300001431\|F14TB_100580220	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1326	Open in IMG/M
3300003911\|JGI25405J52794_10005288	All Organisms → cellular organisms → Bacteria	2323	Open in IMG/M
3300003993\|Ga0055468_10190802	All Organisms → cellular organisms → Bacteria	627	Open in IMG/M
3300004052\|Ga0055490_10131933	All Organisms → cellular organisms → Bacteria	724	Open in IMG/M
3300004070\|Ga0055488_10113234	All Organisms → cellular organisms → Bacteria	673	Open in IMG/M
3300004145\|Ga0055489_10295201	All Organisms → cellular organisms → Bacteria	520	Open in IMG/M
3300004633\|Ga0066395_10377284	All Organisms → cellular organisms → Bacteria	794	Open in IMG/M
3300005105\|Ga0066812_1015013	All Organisms → cellular organisms → Bacteria	591	Open in IMG/M
3300005159\|Ga0066808_1030476	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	560	Open in IMG/M
3300005168\|Ga0066809_10190605	All Organisms → cellular organisms → Bacteria	550	Open in IMG/M
3300005289\|Ga0065704_10137595	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Usitatibacteraceae → Usitatibacter → Usitatibacter palustris	1553	Open in IMG/M
3300005294\|Ga0065705_10142770	All Organisms → cellular organisms → Bacteria	2111	Open in IMG/M
3300005294\|Ga0065705_10631179	All Organisms → cellular organisms → Bacteria	688	Open in IMG/M
3300005295\|Ga0065707_10857505	All Organisms → cellular organisms → Bacteria	562	Open in IMG/M
3300005332\|Ga0066388_100583296	Not Available	1743	Open in IMG/M
3300005332\|Ga0066388_102956574	All Organisms → cellular organisms → Bacteria	868	Open in IMG/M
3300005332\|Ga0066388_106880742	All Organisms → cellular organisms → Bacteria	572	Open in IMG/M
3300005332\|Ga0066388_107086784	All Organisms → cellular organisms → Bacteria	564	Open in IMG/M
3300005468\|Ga0070707_102110815	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	531	Open in IMG/M
3300005536\|Ga0070697_100264002	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1474	Open in IMG/M
3300005554\|Ga0066661_10514303	All Organisms → cellular organisms → Bacteria	722	Open in IMG/M
3300005557\|Ga0066704_10371629	All Organisms → cellular organisms → Bacteria	955	Open in IMG/M
3300005559\|Ga0066700_10049776	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	2568	Open in IMG/M
3300005559\|Ga0066700_10859998	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	606	Open in IMG/M
3300005713\|Ga0066905_100911948	All Organisms → cellular organisms → Bacteria	770	Open in IMG/M
3300005713\|Ga0066905_101060490	All Organisms → cellular organisms → Bacteria	718	Open in IMG/M
3300005764\|Ga0066903_107998105	All Organisms → cellular organisms → Bacteria	542	Open in IMG/M
3300005937\|Ga0081455_10175250	All Organisms → cellular organisms → Bacteria	1629	Open in IMG/M
3300005981\|Ga0081538_10139812	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1119	Open in IMG/M
3300006049\|Ga0075417_10329021	All Organisms → cellular organisms → Bacteria	745	Open in IMG/M
3300006058\|Ga0075432_10005419	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	4349	Open in IMG/M
3300006172\|Ga0075018_10579618	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	594	Open in IMG/M
3300006797\|Ga0066659_11464676	All Organisms → cellular organisms → Bacteria	571	Open in IMG/M
3300006797\|Ga0066659_11632042	All Organisms → cellular organisms → Bacteria	542	Open in IMG/M
3300006845\|Ga0075421_101374488	All Organisms → cellular organisms → Bacteria	778	Open in IMG/M
3300006854\|Ga0075425_102353025	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	591	Open in IMG/M
3300006880\|Ga0075429_100134775	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	2161	Open in IMG/M
3300006880\|Ga0075429_100281496	All Organisms → cellular organisms → Bacteria	1456	Open in IMG/M
3300006904\|Ga0075424_101113013	All Organisms → cellular organisms → Bacteria	841	Open in IMG/M
3300006969\|Ga0075419_10152667	All Organisms → cellular organisms → Bacteria	1511	Open in IMG/M
3300007076\|Ga0075435_101800287	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	537	Open in IMG/M
3300009012\|Ga0066710_102231903	All Organisms → cellular organisms → Bacteria	798	Open in IMG/M
3300009081\|Ga0105098_10012416	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	3159	Open in IMG/M
3300009100\|Ga0075418_11184249	All Organisms → cellular organisms → Bacteria	828	Open in IMG/M
3300009146\|Ga0105091_10451248	All Organisms → cellular organisms → Bacteria	647	Open in IMG/M
3300009157\|Ga0105092_10001548	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	12343	Open in IMG/M
3300009157\|Ga0105092_10035447	All Organisms → cellular organisms → Bacteria	2655	Open in IMG/M
3300009162\|Ga0075423_12873938	All Organisms → cellular organisms → Bacteria	528	Open in IMG/M
3300009168\|Ga0105104_10081221	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	1746	Open in IMG/M
3300009610\|Ga0105340_1381985	All Organisms → cellular organisms → Bacteria	626	Open in IMG/M
3300009801\|Ga0105056_1046671	All Organisms → cellular organisms → Bacteria	599	Open in IMG/M
3300010047\|Ga0126382_10288646	All Organisms → cellular organisms → Bacteria	1225	Open in IMG/M
3300011420\|Ga0137314_1063134	All Organisms → cellular organisms → Bacteria	898	Open in IMG/M
3300011440\|Ga0137433_1092023	All Organisms → cellular organisms → Bacteria	939	Open in IMG/M
3300012202\|Ga0137363_10446210	All Organisms → cellular organisms → Bacteria	1082	Open in IMG/M
3300012205\|Ga0137362_10051591	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	3355	Open in IMG/M
3300012208\|Ga0137376_10536632	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1014	Open in IMG/M
3300012211\|Ga0137377_10513400	All Organisms → cellular organisms → Bacteria	1136	Open in IMG/M
3300012350\|Ga0137372_10255506	All Organisms → cellular organisms → Bacteria	1376	Open in IMG/M
3300012362\|Ga0137361_10285419	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1509	Open in IMG/M
3300012685\|Ga0137397_10033798	All Organisms → cellular organisms → Bacteria	3651	Open in IMG/M
3300012922\|Ga0137394_10024120	Not Available	4900	Open in IMG/M
3300012922\|Ga0137394_10529069	All Organisms → cellular organisms → Bacteria	1000	Open in IMG/M
3300012929\|Ga0137404_10170927	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1823	Open in IMG/M
3300012930\|Ga0137407_10963244	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	808	Open in IMG/M
3300012971\|Ga0126369_11093798	All Organisms → cellular organisms → Bacteria	886	Open in IMG/M
3300012989\|Ga0164305_11193660	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	659	Open in IMG/M
3300014270\|Ga0075325_1037892	All Organisms → cellular organisms → Bacteria	982	Open in IMG/M
3300014320\|Ga0075342_1091261	All Organisms → cellular organisms → Bacteria	785	Open in IMG/M
3300015372\|Ga0132256_100085179	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	3036	Open in IMG/M
3300016294\|Ga0182041_10226461	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1507	Open in IMG/M
3300016445\|Ga0182038_10824292	All Organisms → cellular organisms → Bacteria	814	Open in IMG/M
3300017966\|Ga0187776_10481798	All Organisms → cellular organisms → Bacteria	845	Open in IMG/M
3300017966\|Ga0187776_10600072	All Organisms → cellular organisms → Bacteria	767	Open in IMG/M
3300018028\|Ga0184608_10088883	All Organisms → cellular organisms → Bacteria	1276	Open in IMG/M
3300018053\|Ga0184626_10063633	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1551	Open in IMG/M
3300018053\|Ga0184626_10252147	All Organisms → cellular organisms → Bacteria	740	Open in IMG/M
3300018054\|Ga0184621_10022609	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1949	Open in IMG/M
3300018072\|Ga0184635_10121149	All Organisms → cellular organisms → Bacteria	1040	Open in IMG/M
3300018073\|Ga0184624_10158735	All Organisms → cellular organisms → Bacteria	997	Open in IMG/M
3300018073\|Ga0184624_10465233	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	554	Open in IMG/M
3300018078\|Ga0184612_10624407	All Organisms → cellular organisms → Bacteria	508	Open in IMG/M
3300019228\|Ga0180119_1128246	All Organisms → cellular organisms → Bacteria	820	Open in IMG/M
3300019238\|Ga0180112_1180972	All Organisms → cellular organisms → Bacteria	641	Open in IMG/M
3300020065\|Ga0180113_1259541	All Organisms → cellular organisms → Bacteria	1064	Open in IMG/M
3300022694\|Ga0222623_10402850	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	520	Open in IMG/M
3300022756\|Ga0222622_10456851	All Organisms → cellular organisms → Bacteria	907	Open in IMG/M
3300027006\|Ga0209896_1005918	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1267	Open in IMG/M
3300027513\|Ga0208685_1003726	All Organisms → cellular organisms → Bacteria	4439	Open in IMG/M
3300027722\|Ga0209819_10004561	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	4401	Open in IMG/M
3300027722\|Ga0209819_10041389	All Organisms → cellular organisms → Bacteria	1574	Open in IMG/M
3300027722\|Ga0209819_10098157	All Organisms → cellular organisms → Bacteria	1022	Open in IMG/M
3300027722\|Ga0209819_10121172	All Organisms → cellular organisms → Bacteria	914	Open in IMG/M
3300027743\|Ga0209593_10198450	All Organisms → cellular organisms → Bacteria	708	Open in IMG/M
3300027748\|Ga0209689_1172650	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	992	Open in IMG/M
3300027873\|Ga0209814_10018717	All Organisms → cellular organisms → Bacteria	2796	Open in IMG/M
3300027880\|Ga0209481_10233508	All Organisms → cellular organisms → Bacteria	924	Open in IMG/M
3300027909\|Ga0209382_10292526	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Bacillaceae → Domibacillus → Domibacillus tundrae	1838	Open in IMG/M
3300028889\|Ga0247827_10938599	All Organisms → cellular organisms → Bacteria	584	Open in IMG/M
3300031719\|Ga0306917_11175102	All Organisms → cellular organisms → Bacteria	596	Open in IMG/M
3300031720\|Ga0307469_10077491	All Organisms → cellular organisms → Bacteria	2235	Open in IMG/M
3300031740\|Ga0307468_100026586	All Organisms → cellular organisms → Bacteria	2675	Open in IMG/M
3300031740\|Ga0307468_100150887	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1492	Open in IMG/M
3300031833\|Ga0310917_10544864	All Organisms → cellular organisms → Bacteria	789	Open in IMG/M
3300031890\|Ga0306925_11649653	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	621	Open in IMG/M
3300031910\|Ga0306923_11158469	All Organisms → cellular organisms → Bacteria	829	Open in IMG/M
3300031941\|Ga0310912_10719722	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	773	Open in IMG/M
3300032174\|Ga0307470_10418836	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	953	Open in IMG/M
3300032174\|Ga0307470_10581256	All Organisms → cellular organisms → Bacteria	834	Open in IMG/M
3300032180\|Ga0307471_102399110	All Organisms → cellular organisms → Bacteria	666	Open in IMG/M
3300032205\|Ga0307472_100478711	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1067	Open in IMG/M
3300033289\|Ga0310914_10895502	All Organisms → cellular organisms → Bacteria	787	Open in IMG/M
3300033433\|Ga0326726_10444598	All Organisms → cellular organisms → Bacteria	1234	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	84.03%
Host-Associated	Host-Associated	15.97%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	57.14%
Aquatic	Environmental → Aquatic	26.89%
Plants	Host-Associated → Plants	15.97%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	56.30%
Sediment	Environmental → Aquatic → Sediment	12.61%
Rhizosphere	Host-Associated → Plants → Rhizosphere	12.61%
Freshwater	Environmental → Aquatic → Freshwater	10.92%
Marine	Environmental → Aquatic → Marine	3.36%
Rhizoplane	Host-Associated → Plants → Rhizoplane	2.52%
Peat	Environmental → Terrestrial → Peat	0.84%
Roots	Host-Associated → Plants → Roots	0.84%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	41.18%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	12.61%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	11.76%
Sediment	Environmental → Aquatic → Freshwater → Sediment	10.92%
Loam	Environmental → Terrestrial → Soil → Loam	10.08%
Wetlands	Environmental → Aquatic → Marine → Wetlands	3.36%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	3.36%
Sand	Environmental → Terrestrial → Soil → Sand	1.68%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	1.68%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	0.84%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.84%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.84%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.84%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	16.81%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	14.29%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	12.61%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	11.76%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	10.92%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	9.24%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	6.72%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	3.36%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	3.36%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	1.68%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	1.68%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	1.68%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	1.68%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	0.84%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	0.84%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.84%
Unclassified	Host-Associated → Plants → Roots → Rhizosphere → Unclassified	0.84%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.84%

Habitat	Taxonomy	Distribution
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	11.76%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	9.24%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	8.40%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	8.40%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	6.72%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	6.72%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	5.88%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	4.20%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	3.36%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	3.36%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	2.52%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.52%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere	2.52%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	2.52%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	1.68%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	1.68%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	1.68%
Natural And Restored Wetlands	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands	1.68%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	1.68%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	1.68%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	1.68%
Groundwater Sand	Environmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand	1.68%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	1.68%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.84%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.84%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.84%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	0.84%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	0.84%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Switchgrass Rhizosphere	0.84%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Unclassified → Tabebuia Heterophylla Rhizosphere	0.84%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.84%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000559	Amended soil microbial communities from Kansas Great Prairies, USA - control no BrdU total DNA F1.4 TC clc assemly	Environmental	Open in IMG/M
3300000597	Forest soil microbial communities from Amazon forest - 2010 replicate II A1	Environmental	Open in IMG/M
3300000655	Forest soil microbial communities from Amazon forest - 2010 replicate II A100	Environmental	Open in IMG/M
3300000789	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300001431	Amended soil microbial communities from Kansas Great Prairies, USA - BrdU F1.4TB clc assemly	Environmental	Open in IMG/M
3300003911	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1	Host-Associated	Open in IMG/M
3300003993	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_CattailC_D2	Environmental	Open in IMG/M
3300004052	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushOxbow_ThreeSqC_D2	Environmental	Open in IMG/M
3300004070	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushOxbow_ThreeSqA_D2	Environmental	Open in IMG/M
3300004145	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushOxbow_ThreeSqB_D2	Environmental	Open in IMG/M
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300005105	Soil and rhizosphere microbial communities from Laval, Canada - mgHPC	Environmental	Open in IMG/M
3300005159	Soil and rhizosphere microbial communities from Laval, Canada - mgLPB	Environmental	Open in IMG/M
3300005168	Soil and rhizosphere microbial communities from Laval, Canada - mgLPC	Environmental	Open in IMG/M
3300005289	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2	Host-Associated	Open in IMG/M
3300005294	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk Soil	Environmental	Open in IMG/M
3300005295	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005554	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110	Environmental	Open in IMG/M
3300005557	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153	Environmental	Open in IMG/M
3300005559	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149	Environmental	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005937	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1	Host-Associated	Open in IMG/M
3300005981	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1	Host-Associated	Open in IMG/M
3300006049	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1	Host-Associated	Open in IMG/M
3300006058	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1	Host-Associated	Open in IMG/M
3300006172	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2014	Environmental	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300006845	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006880	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3	Host-Associated	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300006969	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3	Host-Associated	Open in IMG/M
3300007076	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4	Host-Associated	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009081	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 19-21cm May2015	Environmental	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009146	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 10-12cm March2015	Environmental	Open in IMG/M
3300009157	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 19-21cm March2015	Environmental	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009168	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (6) Depth 19-21cm September2015	Environmental	Open in IMG/M
3300009610	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT700	Environmental	Open in IMG/M
3300009801	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S2_20_30	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300011420	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT199_2	Environmental	Open in IMG/M
3300011440	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT840_2	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012350	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_60_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012685	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaG	Environmental	Open in IMG/M
3300012922	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaG	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300014270	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberrySE_CattailA_D1	Environmental	Open in IMG/M
3300014320	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushOxbow_ThreeSqA_D1	Environmental	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300017966	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP12_20_MG	Environmental	Open in IMG/M
3300018028	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_coex	Environmental	Open in IMG/M
3300018053	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_60_b1	Environmental	Open in IMG/M
3300018054	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_b1	Environmental	Open in IMG/M
3300018072	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b2	Environmental	Open in IMG/M
3300018073	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_5_b1	Environmental	Open in IMG/M
3300018078	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_60_coex	Environmental	Open in IMG/M
3300019228	Metatranscriptome of soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaT ERMLT790_16_1Ra (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019238	Metatranscriptome of soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaT ERMLT466_16_1Ra (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300020065	Metatranscriptome of soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaT ERMLT499_16_1Ra (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300022694	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_30_coex	Environmental	Open in IMG/M
3300022756	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1	Environmental	Open in IMG/M
3300027006	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S2_20_30 (SPAdes)	Environmental	Open in IMG/M
3300027513	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT890 (SPAdes)	Environmental	Open in IMG/M
3300027722	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 19-21cm March2015 (SPAdes)	Environmental	Open in IMG/M
3300027743	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (6) Depth 19-21cm September2015 (SPAdes)	Environmental	Open in IMG/M
3300027748	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149 (SPAdes)	Environmental	Open in IMG/M
3300027873	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1 (SPAdes)	Host-Associated	Open in IMG/M
3300027880	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3 (SPAdes)	Host-Associated	Open in IMG/M
3300027909	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)	Host-Associated	Open in IMG/M
3300028889	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day2	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300031833	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M
3300033433	Lab enriched peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF15MN	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
INPhiseqgaiiFebDRAFT_1012928461	3300000364	Soil	MNSQSKGQPMKRSFDRNNESQVALRKSHREEFVERTAPADALRQDTAYVGMKLIPWNDVWRSLKTARFRGNGEMIQVFYDTLFKEAVFDDRGAWS
F14TC_1003244213	3300000559	Soil	MTRSSDRNNRSQIAPRKNHLEESVEGLVSADPPRQEITYVGMKLIPWGDVWKSLRTARFRGNGEMIEVFYDTLFKEAVFDDRGAWSLERRRLH*
AF_2010_repII_A1DRAFT_100273623	3300000597	Forest Soil	MTRSSHRNRSSQVTLRRDRSDQSLDTLTPTDALRQGAAYAGKKLIPWGDVWKSLRTVRFRGNGEMIEVFYDTLFREAVFDDHGAWSLERRRLH*
AF_2010_repII_A100DRAFT_10605151	3300000655	Forest Soil	SQVTLRRDRSGQYGDPSIPTDALRQGAAYAGMKLIPWGDVWKSLRTARFRGNGEMIEVFYDTLFKEAVFDDHGAWSLERRRLH*
JGI1027J11758_122818831	3300000789	Soil	MNSQSKGQPMKRSFDRNNESQVALRKSHREEFVERTAPADALRQDTAYVGMKLIPWNDVWRSLKTARFRGNGEMIQVFYDTLFKEAVFDDR
JGI1027J11758_128344531	3300000789	Soil	MTRSXGRNNGSQIASRKNHPEESVERLVSANAPRQETTYVGMKLIPWGDVWKSLRTARFRGNGEMIEVFYDTLFKXAVFDDRGAWSLERRRLH*
F14TB_1005802203	3300001431	Soil	MTRSSDRNNRSQIARKNHLAEEERIAPAEVLRQDTVYVGMKLIPWSDVWKSLRTARFRGNGEMIEVFYDTLFKEAVFDDRGAWSLERRRLH*
JGI25405J52794_100052883	3300003911	Tabebuia Heterophylla Rhizosphere	MTRSSHRNRSSQVALRRERSEQSGDPLTPTDTLRQEAAYAGMKLIPWGDVWKSLRTARFRGNGEMIEVFYDTLFKEAVFDDHGAWSLERRRLH*
Ga0055468_101908021	3300003993	Natural And Restored Wetlands	MIYKTTKQGTAMALSSNKSSRSAGGRNRPEERVERPAPADALRQDAGAYVGMKLIPWSDVWISLRSARFRGNGKMIQVFYETLFKEAVFDDRGAWSLENRRLH*
Ga0055490_101319331	3300004052	Natural And Restored Wetlands	MIHKTTKLGTAMALSSNKSYGSRIAVGRNRPEERVARLAPADALRQDAAAYLGMKLIPWSDVWKSLRTARFRGNGEMIQVFYETLFKEAVFDDSGAWSLENRRSH*
Ga0055488_101132341	3300004070	Natural And Restored Wetlands	MTYKTTKQGTAMALSSNKSYGSRSAGGRNRPEERVERPAPADALRHDAGAYVGMKLIPWSDVWISLRSARFRGNGKMIQVFYETLFKEAVFDDRGAWSLENRRLH*
Ga0055489_102952011	3300004145	Natural And Restored Wetlands	MTYKTTKQGTAMALSSSKSYGSRSAAGRNRPEERVERPAPADALRQDAGAYIGMKLIPWSDVWISLRSARFRGNGKMIQVFYETLFKEAVFDDRGAWSLENRRLH*
Ga0066395_103772841	3300004633	Tropical Forest Soil	MTRSSHRNRSSQVTLRRDRSDQSLDPLTPTDALRQGAAYAGMKLIPWGDVWKSLRTARFRGNGEMIEVFYDTLFKEAVFDDHGAWSLERRRLH*
Ga0066812_10150131	3300005105	Soil	PMTRSSGRNNGSQIASRKNHPEESVERLVSANAPRQETTYVGMKLIPWGDVWKSLRTARFRGNGEMIEVFYDTLFKESVFDDRGAWSLERRRLH*
Ga0066808_10304761	3300005159	Soil	MTRSSGRNNGSQIASRKNHPEESVERLISANAPRQETTYVGMKLIPWGDVWKSLRTARFRGNGEMIEVFYDTLFKEAVFDDRGAWSLERRRLH*
Ga0066809_101906051	3300005168	Soil	MTRSSDRDNGPQITTRRNRPEERLASGDALRQETAYVGMKLIPWGDVWKSLRTARFRGNGEMIEVFYDTLFKEAVFDDRGAWSLERRRLH*
Ga0065704_101375953	3300005289	Switchgrass Rhizosphere	MARSSDRNNGSQATLPRHRSEQSEGRIAPADTLRQEAAYVGMKLIPWGDVWKSLRTASFRGNGEMIEVFYDTLFKEAVFDDHGAWSLERRRLH*
Ga0065705_101427702	3300005294	Switchgrass Rhizosphere	MARSSDRNNGSQATLPRHRSEQSEERIAPADTLRQEAAYVGMKLIPWGDVWKSLRTASFRGNGEMIEVFYDTLFKEAVFDDHGAWSLERRRLH*
Ga0065705_106311791	3300005294	Switchgrass Rhizosphere	MTRSSDRNNGSQTTLRRNRSEQSADRLAPADALRQEAAYVGMKLIPWGDVWKSLRTARFRGNGEMIEVFYDTLFKEAVFDDHGAWSLERRRLH*
Ga0065707_108575051	3300005295	Switchgrass Rhizosphere	MTRSSGRNNGSQIASRKNHPEESVERLVSANAPRQETTYVGMKLIPWGDVWKSLRTARFRGNGEMIEVFYDTLFKEAVFDDRGAWSLERRRLH*
Ga0066388_1005832961	3300005332	Tropical Forest Soil	MTRSSDRNNRSQGTRQRNRSDQSANALAPADAARPEATYAGMKLIPWGDVWKSLRTARFRGNGEMIEVFYDTLFKEAVFDDNGAWSPETRRLH*
Ga0066388_1029565741	3300005332	Tropical Forest Soil	MTRSSHRNRSSQVTLRRDRSGQYGDPSIPTDALRQGAAYAGMKLIPWGDVWKSLRTARFRGNGEMIEVFYDTLFKEAVFDDHGAWSLERRRLH*
Ga0066388_1068807421	3300005332	Tropical Forest Soil	MTRSSDRNNRSQGKLRRDRSDQSANAFAPASALRQEAAYAGMKLIPWGDVWKSLRTARFRGNGEMIEVFYDTLFKEAVFDDNGAWSPETRRLH*
Ga0066388_1070867842	3300005332	Tropical Forest Soil	MTRSSNRNSGYQVTLRRNRSEQSADPLAPSDAVRQETAYAGMKLIPWGDVWKSLRTARFRGNGEMIEVFYDTLFKEAVFDDKGAWSLERRRLH*
Ga0070707_1021108151	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	NSQSKGQPMKRSFDRNNESQVALRKSHREEFVERTAPADALRQDTAYVGMKLIPWNDVWRSLKTARFRGNGEMIQVFYDTLFKEAVFDDRGAWSLERRRLH*
Ga0070697_1002640022	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	MKRSFDRNNESQVALRKSHREEFVERTAPADALRQDTAYVGMKLIPWNDVWRSLKTARFRGNGEMIQVFYDTLFKEAVFDDRGAWSLERRRLH*
Ga0066661_105143031	3300005554	Soil	MNSQSKGQPMKRSFDGNNEPQVASRKSHREEFVERTAPADALRQDTAYVGMKLIPWNDVWRSLKTARIRGNGEMIQVFYDTLFKEAVFDDRGAWSLERRRLH*
Ga0066704_103716291	3300005557	Soil	MNSQSKGQPMKRSFDRNNESQVALRKSHREEFVERTAPADALRQDTAYVGMKLIPWNDVWRSLKTARIRGNGEMIQVFYDTLFKEAVFDDRGAWSLERRRLH*
Ga0066700_100497762	3300005559	Soil	MKRSFDGNNEPQVASRKSHREEFVERTAPADALRQDTAYVGMKLIPWNDVWRSLKTARFRGNREMIQVFYDTLFKEAVFDDRGAWSLERRRLH*
Ga0066700_108599981	3300005559	Soil	MTRSSDRNNGSQATLQTNRPEESAERIAPAEVLRQDTVYVGMKLIPWSDVWKSLRTARFRGNGEMIEVFYDTLFKEAVFDDRGAWSLERRRLH*
Ga0066905_1009119481	3300005713	Tropical Forest Soil	MTRSSNRNSGSKVTQRQNRSEQSADPLAPADALRQETAYTGMKLIPWGDVWKSLRTARFRGNGEMIEVFYDTLFKEAVFDDHGAWSLERRRLH*
Ga0066905_1010604901	3300005713	Tropical Forest Soil	MTRSSHRNRSSQATLRRNRSEQSGDPRTPTDALRQGAAYAGMKLIPWGDVWKSLRTARFRGNGEMIEVFYDTLFKEAVFDDHGAWSLERRRLH*
Ga0066903_1079981051	3300005764	Tropical Forest Soil	TPMTRSSHRNRSSQVTLRRDRSGQSGDPSTPTDALRQGAVYAGMKLIPWGDVWKSLRTARFRGNGEMIEVFYDTLFKEAVFDDHGAWSLERRRLH*
Ga0081455_101752503	3300005937	Tabebuia Heterophylla Rhizosphere	MAQSTGKNNRSTATPGRNRSEDAVRQGAPADALRQDAAYVGMKLIPWGDVWKSLRTARFRGNGEMIEVFYDTLFKEAVFDDRGAWSLERRRLH*
Ga0081538_101398122	3300005981	Tabebuia Heterophylla Rhizosphere	MAQSTGKNNRSAATAGRNRSEDAVRQVAPAHAPRQDAAYVGMKLIPWGDVWKCLSTARFRGNREMIEVFYDTLFKEAVFDDRGAWSLERRRLH*
Ga0075417_103290211	3300006049	Populus Rhizosphere	MTRSCDRNNRSQITSRKNHLEESVERLASADALRQETAYVGMKLIPWGDVWKSLRTARFRGNGEMIEVFYDTLFKEAVFDDRGAWSLERRRLH*
Ga0075432_100054193	3300006058	Populus Rhizosphere	MTRSSDRNNRSQIAPRKNHLEESVERLVSADPPRQEITYVGMKLIPWGDVWKSLRTARFRGNGEMIEVFYDTLFKEAVFDDRGAWSLERRRLH*
Ga0075018_105796181	3300006172	Watersheds	SQVALRKSHREEFVERTAPVDALRQDTAYVGMKLIPWNDVWRSLKTARFRGNGEMIQVFYDTLFKEAVFDDRGAWSLERRRLH*
Ga0066659_114646761	3300006797	Soil	QPMKRSFDGNNEPQVASRKSHREEFVERTAPADALRQDTAYVGMKLIPWNDVWRSLKTARIRGNGEMIQVFYDTLFKEAVFDDRGAWSLERRRLH*
Ga0066659_116320421	3300006797	Soil	RHRSEQSAERLAPADALRQQAAYVGMKLIPWGDVWKSLRTARFRGNGEMIEVFYDTLFKEAVFDDRGAWSLECRRLH*
Ga0075421_1013744881	3300006845	Populus Rhizosphere	MTRSSDRNNRSQATLPRHRSEQSEERIAPADTLRQEPAYVGMKLIPWGDVWKSLRTASFRGNGEMIEVFYDTLFKEAVFDDHGAWSLERRRLH*
Ga0075425_1023530252	3300006854	Populus Rhizosphere	MTRSSGRNNGSQIASRKNHPEESGERLVSANTPRQETTYVGMKLIPWGDVWKSLRTARFRGNGEMIEVFYDTLFKEAVFDDRG
Ga0075429_1001347753	3300006880	Populus Rhizosphere	MTRSCNRNNRSQITSRKNHLEESVERLASADALRQETAYVGMKLIPWGDVWKSLRTARFRGNGEMIEVFYDTLFKEA
Ga0075429_1002814961	3300006880	Populus Rhizosphere	MTRSSDRNNRSQIAPRKNHLEESVERLVSADPPRQEITYVGMKLIPWGDVWKSLRTARFRGNGEMIEVFYDTLFKEA
Ga0075424_1011130132	3300006904	Populus Rhizosphere	MTRSSGRNNGSQIASRKNHPEESVERLVSANAPRQETTYVGMKLIPWGDVWKSLRTARFRGNGEMIEVFYDTLFKEAVFDD
Ga0075419_101526671	3300006969	Populus Rhizosphere	MTRSCNRNNRSQITSRKNHLEESVERLASADALRQETAYVGMKLIPWGDVWKSLRTARFRGNGEMIEVFYDTLFKEAVFDDRGAWSLEAEDFTNNG
Ga0075435_1018002872	3300007076	Populus Rhizosphere	MTRSCDRNNRSQITSRKNHLEESVERLASADALRQETAYVGMKLIPWGDVWKSLRTARFRGNGEMIEVFYDTLFKEAVFDDRGAWSL
Ga0066710_1022319031	3300009012	Grasslands Soil	MNSQSKGQPMKRSFDGNNEPQVASRKSHREEFVERTAPADALRQDTAYVGRKLIPWNDVWRSLKTARIRGNGEMIQVFYDTLFKEAVFDDRGAWSLERRRLH
Ga0105098_100124162	3300009081	Freshwater Sediment	MAQSSDKKNRSPATGNRSEGSVRQAPADALRLDAAYVGMKLIPWGEVWKSLKTARFRGNGEMIEVFYDTLFKEAVFDDHGAWSLERRRLH*
Ga0075418_111842493	3300009100	Populus Rhizosphere	TSHKSSKQGTTMARSSDRNNGSQATLPRHRSEQSEGRIAPADTLRQEAAYVGMKLIPWGDVWKSLRTASFRGNGEMIEVFYDTLFKEAVFDDHGAWSLERRRLH*
Ga0105091_104512481	3300009146	Freshwater Sediment	MAQSSDKKNRSPATGNRSEGSVRQAPADALRLDAAYVGMKLIPWGDVWKSLRTARFRGNGEMIEVFYDTLFKEAVFDDHGAWSLERRSLH*
Ga0105092_100015481	3300009157	Freshwater Sediment	MAQSSDKKNRSPATGNRSEGSVRQAPADALRLDAAYVGMKLIPWGEVWKSLKTARFRGNGEMIEVFYDTLFKEAVFDDHGAWSLERRSLH*
Ga0105092_100354476	3300009157	Freshwater Sediment	MAQSSDKNNGSSVTPRRNRSEDSVRQAAPADALRQDVAYVGMKLIPWGDVWKSLRTARFRGNGEMIEVFYDTLFKEAVFDDRGAWSLERRTLH*
Ga0075423_128739381	3300009162	Populus Rhizosphere	MTRSCNRNNRSQITSRKNHLEESVERLASADALRQETAYVGMKLIPWGDVWKSLRTARFRGNGEMIEVFYDTLFKEAVFDDRGAWSLERRRLH*
Ga0105104_100812211	3300009168	Freshwater Sediment	MARSSDRNNESQATLPRHRSEQSEERIAPADTLRQEAAYVGMKLIPWGDVWKSLRTASFRGNGEMIEVFYDTLFKEAVFDDHGAWSLERRRLH*
Ga0105340_13819852	3300009610	Soil	TRSSDRNNGSQATLRRNRPEESAGRLAPADALRQETTYVGMKLIPWGDVWKSLRTARFRGNGEMIEVFYDTLFKEAVFDDRGAWSLERRRLH*
Ga0105056_10466711	3300009801	Groundwater Sand	MTRSSDRNNGSQTTRRTTRQGESAERIAPAEVLRQDTVYVGMKLIPWSDVWKTLRTARFRGNGEMIEVFYDTLFKEAVFDDRGAWSLERRSLH*
Ga0126382_102886461	3300010047	Tropical Forest Soil	MTRSSDRNNRSQGKLRRDRSDQSADAFAPASALRQEAAYAGMKLIPWGDVWKSLRTARFRGNGEMIEVFYDTLFKEAVFDDNGAWSLERRRLH*
Ga0137314_10631342	3300011420	Soil	SRISAARRRSEEFVERLAPADALQQDTVYLGMKLIPWSDVWKSLRTAKFRGNGEMIQVFYETLFKEAVFDDRGAWSLENRRLH*
Ga0137433_10920232	3300011440	Soil	YKTPKQGTAMRLSSNKSNGSRISAARNRSEEFVERLAPADALRQDTAYLGMKLIPWSDVWKSLRTAKFRGNGEMIQVFYETLFKEAVFDDRGAWSLENRRLH*
Ga0137363_104462101	3300012202	Vadose Zone Soil	MNSQSKGQPMKRSFDRNNESQVALRKSHREEFVERTAPADALRQDTAYVGMKLIPWNDVWRSLKTARFRGNGEMIQVFYDTLF
Ga0137362_100515911	3300012205	Vadose Zone Soil	MNSQSKGQPMKRSFDRNNESQVALRKSHREEFVERTAPADALRQDTAYVGMKLIPWNDVWRSLKTARFRGNGEMIQVFYDTLFKEAVFDDRGAWSLERRRLH*
Ga0137376_105366321	3300012208	Vadose Zone Soil	MTRSSDRNNGSQTTLQTNRPEESAERIAPAEVLRQDTVYVGMKLIPWSDVWKSLRTARFRGNGEMIEVFYDTLFKEAVFDDRGAWSLERRRLH*
Ga0137377_105134001	3300012211	Vadose Zone Soil	LRTNRPEESAERIASADTLGREIAYVGMKLIPWGDVWKSLRTARFRGNGEMIEVFYDTLFKEAVFDDRGAWSLERRRLH*
Ga0137372_102555061	3300012350	Vadose Zone Soil	MTRSSDRNNGLQTALRTNRPEESAERIASADTLGREIAYVGMKLIPWGDVWKSLRTARFRGNGEMIEVFYDTLFKEAVFDDRGAWSLERRRLH*
Ga0137361_102854191	3300012362	Vadose Zone Soil	MNSQSKGQPMKRSFDGNNEPQVASRKSHREEFVERTAPADALRQDTAYVGMKLIPWNDVWRSLKTARFRGNGEMIQVFYDTLFKEAVFDDRGAWSLERRRLH*
Ga0137397_100337983	3300012685	Vadose Zone Soil	MTRSSDRNNGSQTALRTNRPEESAERIAPAEVLRQDTVYVGMKLIPWSDVWKSLRTARFRGNGEMIEVFYDTLFKEAVFDDRGAWSLERRRLH*
Ga0137394_100241205	3300012922	Vadose Zone Soil	MTRSSDRNNGSQTALRTNRPEESAERIAPAEVLRQDTVYVGMKLIPWSDVWKSLRTARFRGNGEMIEVFYDTLFKEAVFDDRGAWSLERRKLH*
Ga0137394_105290692	3300012922	Vadose Zone Soil	MTRSSDRNNGPQATLRRHRSEQSAERLAPADALRQQAAYVGMKLIPWGDVWKSLRTARFRGNGEMIEVFYDTLFKEAVFDDRGAWSLERRRLH*
Ga0137404_101709272	3300012929	Vadose Zone Soil	MTRSSDRNNGSQTTLQTNRPEESTERIAPAEVLRQDTVYVGMKLIPWSDVWKSLRTARFRGNGEMIEVFYDTLFKEAVFDDRGAWSLERRRLH*
Ga0137407_109632442	3300012930	Vadose Zone Soil	DRNNASQTTLQTNRPEESAERIAPAEVLRQDTVYVGMKLIPWSDVWKSLRTARFRGNGEMIEVFYDTLFKEAVFDDRGAWSLERRRLH*
Ga0126369_110937981	3300012971	Tropical Forest Soil	MTRSSHRNRSSQVTLRRDRSDQSLDPLTPTDALRQGAAYAGMKLIPWGDVWKSLRTVRFRGNGEMIEVFYDTLFKEAVFDDHGAWSLERRRLH*
Ga0164305_111936601	3300012989	Soil	NHPEESGERLVSANTPRQETTYVGMKLIPWGDVWKSLRTARFRGNGEMIEVFYDTLFKEAVFDDRGAWSLERRRLH*
Ga0075325_10378921	3300014270	Natural And Restored Wetlands	MTYKTTKQGTAMALSSNKSYGSRSAAGRTRPDGRVERPAPADALRQDAGAYIGMKLIPWSDVWISLRSARFRGNGKMIQVFYETLFKEAVFDDRGAWSLENRRLH*
Ga0075342_10912612	3300014320	Natural And Restored Wetlands	MTYKTTKQGTAMALSSNKSYGSRSAGGRNRPEERVERPAPADALRQDAGAYIGMKLIPWSDVWISLRSARFRGNGKMIQVFYETLFKEAVFDDRGAWSLENRRLH*
Ga0132256_1000851793	3300015372	Arabidopsis Rhizosphere	MTRSSDRDNGSQVSRINSRRNRPEEPRERLASSDALQGMVYVGMKLIPWGDVWKSLRTARFRGNGEMIEVFYDTLFKEAVFDDRGAWSLERRRLH*
Ga0182041_102264612	3300016294	Soil	MKRSFDRNSESQIPARKNHREEFAERLASADAVRQDTAYVGMKLIPWNDVWRSLRTARFRGNGEMIQVFYDTLFKEAVFDDRGAWSLERRRLH
Ga0182038_108242922	3300016445	Soil	PARKNHREEFAERLAPADAVRQDTTYVGMKLIPWNDVWRSLRTARFRGNGEMIQVFYDTLFKEAVFDDRGAWSLERRRLH
Ga0187776_104817982	3300017966	Tropical Peatland	MKRSSERNSEPQITPRKNHREDFGDRLAPADALRQDTVYAGMKLIPWGDVWKSLRTARFRGNGEMIQVFYDTLFKEAVFDDRGAWSLHRRLH
Ga0187776_106000721	3300017966	Tropical Peatland	MTRSSDKRNRSSISQFATRKHRPRESSERLSSTNLVQQEIAYTGMKLIPWGDVWKFLRTARFRGHGEMIEVFYDTLFKEAVFDDRGAWSLEHRQLH
Ga0184608_100888831	3300018028	Groundwater Sediment	MTRSSDRNNGSQTTLRRNRSEQSAEQLAPADALRQEAAYVGMKLIPWGDVWKSLRTARFRGNGEMIEVFYDTLFKEAVFDDRGAWSLERRKLH
Ga0184626_100636332	3300018053	Groundwater Sediment	MTRSSDRNNGSQATLRRNRPEESAGRLAPADALRQETTYVGMKLIPWGDVWKSLRTARFRGNGEMIEVFYDTLFKEAVFDDRGAWSLERRRLH
Ga0184626_102521471	3300018053	Groundwater Sediment	MTRSSDRNNGSQATLRRNRSEQSAERLAPADALRQEAVYVGMKLIPWGDVWKSLRTARFRGNGEMIEVFYDTLFKEAVFDDRGAWSLERRRLH
Ga0184621_100226094	3300018054	Groundwater Sediment	MTRSSDRNNGSQTTLRRNRSEQSAEQLAPADALRQEAAYVGMKLIPWGDVWKSLRTARFRGNGEMIEVFYDTLFKEAVFDDRGAWSLERRRLH
Ga0184635_101211491	3300018072	Groundwater Sediment	MTRSSDRNNRSQIAPRKNHPEESVERLVSADALRQEAVYVGMKLIPWGDVWKSLRTARFRGNGEMIEVFYDTLFKEAVFDDRGAWSFERRRLH
Ga0184624_101587351	3300018073	Groundwater Sediment	MTRSSDRNNRSQIAPRKNHPEESVERFVSADALRQETAYVGMKLIPWGDVWKSLRTARFRGNGEMIEVFYDTLFKEAVFDDRGAWSFERRRLH
Ga0184624_104652331	3300018073	Groundwater Sediment	KQGTPMTRSSDRNNGSQATLRRNRSEQSAERLAPADALRQEAAYVGMKLIPWGDVWKSLRTASFRGNEEMIEVFYDTLFKEAVFDDRGAWSLERRRLH
Ga0184612_106244071	3300018078	Groundwater Sediment	MTRSSDRNNRSQIAPRKNHPEESVERLVSADALRQEATYVGMKLIPWGDVWKSLRTARFRGNGEMIEVFYDTLFKEA
Ga0180119_11282462	3300019228	Groundwater Sediment	VYKTPKQGTAMALSSNKSSGSRISAARSRSEEFVERLAPADALQQDTVYLGMKLIPWSDVWKSLRTAKFRGNGEMIQVFYETLFKEAVFDDRGAWSLENRRLH
Ga0180112_11809721	3300019238	Groundwater Sediment	KSSGSRISAARSRSEEFVERLAPADALQQDTVYLGMKLIPWSDVWKSLRTAKFRGNGEMIQVFYETLFKEAVFDDRGAWSLENRRLH
Ga0180113_12595411	3300020065	Groundwater Sediment	KTPKQGTAMALSSNKSSGSRISAARSRSEEFVERLAPADALQQDTVYLGMKLIPWSDVWKSLRTAKFRGNGEMIQVFYETLFKEAVFDDRGAWSLENRRLH
Ga0222623_104028501	3300022694	Groundwater Sediment	IAPRKNHPEESVERLVSADALRQEATYVGMKLIPWGDVWKSLRTARFRGNGEMIEVFYDTLFKEAVFDDRGAWSLERRRLH
Ga0222622_104568511	3300022756	Groundwater Sediment	MTRSSDRNNRSQIAPRKNHPEESVERLVSADALRQEATYVGMKLIPWGDVWKSLRTARFRGNGEMIEVFYDTLFKEAVFDDRGAWSLERRRLH
Ga0209896_10059181	3300027006	Groundwater Sand	MTRSSDRNNGSQTTRRTTRQGESAERIAPAEVLRQDTVYVGMKLIPWSDVWKTLRTARFRGNGEMIEVFYDTLFKEAVFDDRGAWSLERRSLH
Ga0208685_10037265	3300027513	Soil	MALSSNKSSGSRISAARSRSEEFVERLAPADALQQDTVYLGMKLIPWSDVWKSLRTAKFRGNGEMIQVFYETLFKEAVFDDRGAWSLENRRLH
Ga0209819_100045611	3300027722	Freshwater Sediment	MAQSSDKKNRSPATGNRSEGSVRQAPADALRLDAAYVGMKLIPWGEVWKSLKTARFRGNGEMIEVFYDTLFKEAVFDDHGAWSLERRSLH
Ga0209819_100413892	3300027722	Freshwater Sediment	MAQSSDKNNGSSVTPRRNRSEDSVRQAAPADALRQDVAYVGMKLIPWGDVWKSLRTARFRGNGEMIEVFYDTLFKEAVFDDRGAWSLERRTLH
Ga0209819_100981571	3300027722	Freshwater Sediment	MARSSDRNNESQATLPRHRSEQSEERIAPADTLRQEAAYVGMKLIPWGDVWKSLRTASFRGNGEMIEVFYDTLFKEAVFDDHGAWSLERRRLH
Ga0209819_101211721	3300027722	Freshwater Sediment	MAQSSDKSNRSPAIRNRSEDSVRQIAPADALRQDTAYVGMKLIPWGDVWKSLSTARFRGNGEMIEVFYDTLFKEAVFDDRGAWSL
Ga0209593_101984501	3300027743	Freshwater Sediment	MARSSDRNNEAQATLPRHRSEQSEERIAPADTLRQEAAYVGMKLIPWGDVWKSLRTASFRGNGEMIEVFYDTLFKEAVFDDHGAWSLERRRLH
Ga0209689_11726501	3300027748	Soil	MNSQSKGQPMKRSFDGNNEPQVASRKSHREEFVERTAPADALRQDTAYVGMKLIPWNDVWRSLKTARFRGNREMIQVFYDTLFKEAVFDDRGAWSLERRRLH
Ga0209814_100187172	3300027873	Populus Rhizosphere	MTRSCNRNNRSQITSRKNHLEESVERLASADALRQETAYVGMKLIPWGDVWKSLRTARFRGNGEMIEVFYDTLFKEAVFDDRGAWSLERRRLH
Ga0209481_102335081	3300027880	Populus Rhizosphere	MTRSSDRNNRSQIAPRKNHLEESVERLVSADPPRQEITYVGMKLIPWGDVWKSLRTARFRGNGEMIEVFYDTLFKEAVFDDRGAWSLERRRLH
Ga0209382_102925261	3300027909	Populus Rhizosphere	MTRSCDRNNRSQITSRKNHLEESVERLASADALRQETAYVGMKLIPWGDVWKSLRTARFRGNGEMIEVFYDTLFKEAVFDDRGAWSLERRRLH
Ga0247827_109385992	3300028889	Soil	DYKRSAKFLCDSTHRIKPSKQGTPMTRSSGRNNGSQIASRKNYPEESVERLVSANAPRQETTYVGMKLIPWGDVWKSLRTARFRGNGEMIEVFYDTLFKEAVFDDHGAWSLERRRLH
Ga0306917_111751021	3300031719	Soil	MKRSFDRNSESQIPARKNHREEFAERLAPADAVRQDTAYVGMKLIPWNDVWRSLRTARFRGNGEMIQVFYDTLFKEAVFDDRGAWSLERRRLH
Ga0307469_100774911	3300031720	Hardwood Forest Soil	MTRSSGRNNGSQIASRKNHPEESVERLVSANAPRQETRYVGMKLIPWGDVWKSLRTARFRGNGEMIEVFYDTLFKEAVFDDRGAWSLERRRLH
Ga0307468_1000265864	3300031740	Hardwood Forest Soil	MARSSDRNNGSQATLPRHRSEQSEGRIAPADTLRQEAAYVGMKLIPWGDVWKSLRTASFRGNGEMIEVFYDTLFKEAVFDDHGAWSLERRRLH
Ga0307468_1001508872	3300031740	Hardwood Forest Soil	MTRSSGRNNGSQIASRKNHPEESVERLVSANAPRQETTYVGMKLIPWGDVWKSLRTARFRGNGEMIEVFYDTLFKEAVFDDRGAWSLERRRLH
Ga0310917_105448641	3300031833	Soil	DRMNHPSKGQPMKRSFDRNSESQIPARKNHREEFAERLAPADAVRQDTAYVGMKLIPWNDVWRSLRTARFRGNGEMIQVFYDTLFKEAVFDDRGAWSLERRRLH
Ga0306925_116496532	3300031890	Soil	NSESQIPARKNHCEEFAERLASADAVRQDTAYVGMKLIPWNDVWRSLRTARFRGNGEMIQVFYDTLFKEAVFDDRGAWSLERRRLH
Ga0306923_111584691	3300031910	Soil	KGQPMKRSFDRNSESQIPARKNHREEFAERLAPADAVRQDTAYVGMKLIPWNDVWRSLRTARFRGNGEMIQVFYDTLFKEAVFDDRGAWSLERRRLH
Ga0310912_107197221	3300031941	Soil	MKRSFDRNSESQIPARKNHCEEFAERLASADAVRQDTAYVGMKLIPWNDVWRSLRTARFRGNGEMIQVFYDTLFKEAVFDDRGAWSLERRRLH
Ga0307470_104188361	3300032174	Hardwood Forest Soil	MKRSFDRNNESQVALRKSHREEFVERTAPADALRQDTAYVGMKLIPWNDVWRSLKTARFRGNGEMIQVFYDTLFKEAVFDDRGAWSLERRRLH
Ga0307470_105812561	3300032174	Hardwood Forest Soil	MARSSDRNNGSQATLPRHRSEQSEERIAPADTLRQEAAYVGMKLIPWGDVWKSLRTASFRGNGEMIEVFYDTLFKEAVFDDHGAWSLERRRLH
Ga0307471_1023991101	3300032180	Hardwood Forest Soil	MTRSSGRNNGSQIASRKNHPEESGERLVSANTPRQETTYVGMKLIPWGDVWKSLRTARFRGNGEMIEVFYDTLFKEAVFDDRGAWSLERRRLH
Ga0307472_1004787111	3300032205	Hardwood Forest Soil	MKRSFDRNNESQVALRKSHREEFVERTAPADALRQETAYVGMKLIPWNDVWRSLKTARFRGNGEMIQVFYDTLFKEAVFDDRGAWSLERRRLH
Ga0310914_108955021	3300033289	Soil	MKRSFDRNSESQIPARKNHREEFAERLAPADAVRQDTAYVGMKLIPWNDVLRSLRTARFRGNGEMIQVFYDTLFKEAVFDDRGAWSLERRRLH
Ga0326726_104445981	3300033433	Peat Soil	MTRSSGRNNGSQIAPRKNHPEESVERLVSADAPRQETTYVGMKLIPWGDVWKSLRTARFRGNGEMIEVFYDTLFKEAVFDDRGAWSLERRRLH

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F075274

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences