NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome / Metatranscriptome Family F075180

Metagenome / Metatranscriptome Family F075180

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F075180
Family Type Metagenome / Metatranscriptome
Number of Sequences 119
Average Sequence Length 76 residues
Representative Sequence TVVRWELEPRDVHGLQHQGPGRVGTGTMVKIRHSGFAGNIAAAQGHGQGWIRVLGWMQAFVEKGETVDTRP
Number of Associated Samples 106
Number of Associated Scaffolds 119

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 0.88 %
% of genes near scaffold ends (potentially truncated) 89.92 %
% of genes from short scaffolds (< 2000 bps) 90.76 %
Associated GOLD sequencing projects 98
AlphaFold2 3D model prediction Yes
3D model pTM-score0.60

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Bacteria (92.437 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil
(11.765 % of family members)
Environment Ontology (ENVO) Unclassified
(34.454 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(40.336 % of family members)


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Multiple Sequence Alignments

Select alignment to view:      

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 24.24%    β-sheet: 31.31%    Coil/Unstructured: 44.44%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.60
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 119 Family Scaffolds
PF00919UPF0004 6.72
PF00857Isochorismatase 5.88
PF02463SMC_N 5.04
PF13564DoxX_2 3.36
PF04055Radical_SAM 2.52
PF11645PDDEXK_5 2.52
PF04185Phosphoesterase 2.52
PF01522Polysacc_deac_1 1.68
PF08327AHSA1 1.68
PF01740STAS 1.68
PF01177Asp_Glu_race 0.84
PF01979Amidohydro_1 0.84
PF13493DUF4118 0.84
PF00903Glyoxalase 0.84
PF02397Bac_transf 0.84
PF13226DUF4034 0.84
PF01402RHH_1 0.84
PF00005ABC_tran 0.84
PF07995GSDH 0.84
PF01833TIG 0.84
PF00988CPSase_sm_chain 0.84
PF14534DUF4440 0.84
PF12681Glyoxalase_2 0.84
PF01872RibD_C 0.84
PF02012BNR 0.84
PF01047MarR 0.84
PF02577BFN_dom 0.84
PF12867DinB_2 0.84
PF03625DUF302 0.84
PF12833HTH_18 0.84

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 119 Family Scaffolds
COG0621tRNA A37 methylthiotransferase MiaBTranslation, ribosomal structure and biogenesis [J] 6.72
COG1335Nicotinamidase-related amidaseCoenzyme transport and metabolism [H] 5.88
COG1535Isochorismate hydrolaseSecondary metabolites biosynthesis, transport and catabolism [Q] 5.88
COG3511Phospholipase CCell wall/membrane/envelope biogenesis [M] 2.52
COG0505Carbamoylphosphate synthase small subunitAmino acid transport and metabolism [E] 1.68
COG0726Peptidoglycan/xylan/chitin deacetylase, PgdA/NodB/CDA1 familyCell wall/membrane/envelope biogenesis [M] 1.68
COG0262Dihydrofolate reductaseCoenzyme transport and metabolism [H] 0.84
COG1259Bifunctional DNase/RNaseGeneral function prediction only [R] 0.84
COG1985Pyrimidine reductase, riboflavin biosynthesisCoenzyme transport and metabolism [H] 0.84
COG2133Glucose/arabinose dehydrogenase, beta-propeller foldCarbohydrate transport and metabolism [G] 0.84
COG2148Sugar transferase involved in LPS biosynthesis (colanic, teichoic acid)Cell wall/membrane/envelope biogenesis [M] 0.84
COG3439Uncharacterized conserved protein, DUF302 familyFunction unknown [S] 0.84

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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms92.44 %
UnclassifiedrootN/A7.56 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300002245|JGIcombinedJ26739_100665986All Organisms → cellular organisms → Bacteria918Open in IMG/M
3300002459|JGI24751J29686_10035774All Organisms → cellular organisms → Bacteria1029Open in IMG/M
3300004080|Ga0062385_10302998All Organisms → cellular organisms → Bacteria → Proteobacteria916Open in IMG/M
3300004091|Ga0062387_100884500All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales674Open in IMG/M
3300004973|Ga0072322_1298286All Organisms → cellular organisms → Bacteria803Open in IMG/M
3300005167|Ga0066672_10452552All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales838Open in IMG/M
3300005332|Ga0066388_102269413All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium981Open in IMG/M
3300005332|Ga0066388_108781612All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium502Open in IMG/M
3300005345|Ga0070692_10926580All Organisms → cellular organisms → Bacteria604Open in IMG/M
3300005354|Ga0070675_100007783All Organisms → cellular organisms → Bacteria8298Open in IMG/M
3300005364|Ga0070673_100265334All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae1501Open in IMG/M
3300005365|Ga0070688_100354828All Organisms → cellular organisms → Bacteria1074Open in IMG/M
3300005435|Ga0070714_100899977All Organisms → cellular organisms → Bacteria859Open in IMG/M
3300005437|Ga0070710_10854232All Organisms → cellular organisms → Bacteria654Open in IMG/M
3300005450|Ga0066682_10635368All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales665Open in IMG/M
3300005457|Ga0070662_101177825All Organisms → cellular organisms → Bacteria658Open in IMG/M
3300005459|Ga0068867_102056147All Organisms → cellular organisms → Bacteria540Open in IMG/M
3300005467|Ga0070706_100983779All Organisms → cellular organisms → Bacteria778Open in IMG/M
3300005468|Ga0070707_100736966All Organisms → cellular organisms → Bacteria949Open in IMG/M
3300005557|Ga0066704_10384231All Organisms → cellular organisms → Bacteria936Open in IMG/M
3300005557|Ga0066704_10434407All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium869Open in IMG/M
3300005561|Ga0066699_10278443All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Terriglobus → Terriglobus albidus1187Open in IMG/M
3300005561|Ga0066699_11259941All Organisms → cellular organisms → Bacteria507Open in IMG/M
3300005568|Ga0066703_10515904All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium → Mesorhizobium loti707Open in IMG/M
3300005587|Ga0066654_10547020All Organisms → cellular organisms → Bacteria → Acidobacteria637Open in IMG/M
3300005834|Ga0068851_10705436All Organisms → cellular organisms → Bacteria621Open in IMG/M
3300006046|Ga0066652_100452915All Organisms → cellular organisms → Bacteria1181Open in IMG/M
3300006059|Ga0075017_100040019All Organisms → cellular organisms → Bacteria3117Open in IMG/M
3300006175|Ga0070712_100362514All Organisms → cellular organisms → Bacteria1189Open in IMG/M
3300006237|Ga0097621_101414254All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium659Open in IMG/M
3300006358|Ga0068871_102351246All Organisms → cellular organisms → Bacteria → Proteobacteria508Open in IMG/M
3300006573|Ga0074055_11017164All Organisms → cellular organisms → Bacteria → Proteobacteria507Open in IMG/M
3300006804|Ga0079221_11697594All Organisms → cellular organisms → Bacteria514Open in IMG/M
3300006871|Ga0075434_101112868All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium → unclassified Mesorhizobium → Mesorhizobium sp. ORS 3324803Open in IMG/M
3300006954|Ga0079219_10481875All Organisms → cellular organisms → Bacteria860Open in IMG/M
3300009090|Ga0099827_10490402All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1055Open in IMG/M
3300009101|Ga0105247_10894033All Organisms → cellular organisms → Bacteria685Open in IMG/M
3300009101|Ga0105247_11846755All Organisms → cellular organisms → Bacteria → Acidobacteria504Open in IMG/M
3300009826|Ga0123355_10343425All Organisms → cellular organisms → Bacteria1986Open in IMG/M
3300009839|Ga0116223_10460920All Organisms → cellular organisms → Bacteria → Acidobacteria743Open in IMG/M
3300010048|Ga0126373_10284030All Organisms → cellular organisms → Bacteria1643Open in IMG/M
3300010048|Ga0126373_11211693Not Available821Open in IMG/M
3300010358|Ga0126370_11982374All Organisms → cellular organisms → Bacteria → Acidobacteria568Open in IMG/M
3300010364|Ga0134066_10431282All Organisms → cellular organisms → Bacteria → Acidobacteria510Open in IMG/M
3300010366|Ga0126379_12882944All Organisms → cellular organisms → Bacteria575Open in IMG/M
3300010366|Ga0126379_13446225Not Available530Open in IMG/M
3300010398|Ga0126383_11208168All Organisms → cellular organisms → Bacteria → Acidobacteria846Open in IMG/M
3300010399|Ga0134127_12535180All Organisms → cellular organisms → Bacteria → Acidobacteria592Open in IMG/M
3300012199|Ga0137383_10191796All Organisms → cellular organisms → Bacteria → Acidobacteria1498Open in IMG/M
3300012200|Ga0137382_10285813All Organisms → cellular organisms → Bacteria1148Open in IMG/M
3300012209|Ga0137379_11193712All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium667Open in IMG/M
3300012209|Ga0137379_11294613All Organisms → cellular organisms → Bacteria634Open in IMG/M
3300012210|Ga0137378_10122667All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium2399Open in IMG/M
3300012211|Ga0137377_11831442All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium526Open in IMG/M
3300012351|Ga0137386_10323742All Organisms → cellular organisms → Bacteria → Acidobacteria1109Open in IMG/M
3300012363|Ga0137390_10762363All Organisms → cellular organisms → Bacteria927Open in IMG/M
3300012363|Ga0137390_11429074All Organisms → cellular organisms → Bacteria635Open in IMG/M
3300012917|Ga0137395_10973875All Organisms → cellular organisms → Bacteria → Acidobacteria609Open in IMG/M
3300012929|Ga0137404_12304389All Organisms → cellular organisms → Bacteria → Acidobacteria504Open in IMG/M
3300012948|Ga0126375_11175941All Organisms → cellular organisms → Bacteria637Open in IMG/M
3300013770|Ga0120123_1137383All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium575Open in IMG/M
3300015264|Ga0137403_10524628All Organisms → cellular organisms → Bacteria1054Open in IMG/M
3300017939|Ga0187775_10042539All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria1355Open in IMG/M
3300017995|Ga0187816_10064373All Organisms → cellular organisms → Bacteria1547Open in IMG/M
3300018006|Ga0187804_10378925All Organisms → cellular organisms → Bacteria624Open in IMG/M
3300018034|Ga0187863_10305359All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium885Open in IMG/M
3300018035|Ga0187875_10506289All Organisms → cellular organisms → Bacteria → Acidobacteria640Open in IMG/M
3300018046|Ga0187851_10209483All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1155Open in IMG/M
3300018085|Ga0187772_10037728All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium2909Open in IMG/M
3300018482|Ga0066669_10295440All Organisms → cellular organisms → Bacteria1311Open in IMG/M
3300019887|Ga0193729_1059789All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Terriglobus → Terriglobus albidus1527Open in IMG/M
3300019890|Ga0193728_1249044All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium712Open in IMG/M
3300020010|Ga0193749_1064303All Organisms → cellular organisms → Bacteria692Open in IMG/M
3300020022|Ga0193733_1059909All Organisms → cellular organisms → Bacteria1072Open in IMG/M
3300020022|Ga0193733_1205881All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Terriglobus → Terriglobus albidus504Open in IMG/M
3300020150|Ga0187768_1046348All Organisms → cellular organisms → Bacteria964Open in IMG/M
3300021171|Ga0210405_10588911All Organisms → cellular organisms → Bacteria867Open in IMG/M
3300021401|Ga0210393_11559779All Organisms → cellular organisms → Bacteria → Acidobacteria524Open in IMG/M
3300021432|Ga0210384_10684735All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium918Open in IMG/M
3300021475|Ga0210392_10220371All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1333Open in IMG/M
3300021479|Ga0210410_10224971All Organisms → cellular organisms → Bacteria1682Open in IMG/M
3300021559|Ga0210409_11403986All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium → unclassified Mesorhizobium → Mesorhizobium sp. LSJC280B00574Open in IMG/M
3300021560|Ga0126371_13289766All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium546Open in IMG/M
3300025321|Ga0207656_10489672All Organisms → cellular organisms → Bacteria624Open in IMG/M
3300025898|Ga0207692_10688436All Organisms → cellular organisms → Bacteria663Open in IMG/M
3300025913|Ga0207695_10928295All Organisms → cellular organisms → Bacteria → Acidobacteria750Open in IMG/M
3300025915|Ga0207693_10322870All Organisms → cellular organisms → Bacteria1208Open in IMG/M
3300025941|Ga0207711_11071443All Organisms → cellular organisms → Bacteria → Acidobacteria746Open in IMG/M
3300025960|Ga0207651_11049920All Organisms → cellular organisms → Bacteria729Open in IMG/M
3300026023|Ga0207677_10223999All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae1510Open in IMG/M
3300026142|Ga0207698_10069222All Organisms → cellular organisms → Bacteria → Proteobacteria2790Open in IMG/M
3300027660|Ga0209736_1208144All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium → unclassified Mesorhizobium → Mesorhizobium sp. LSJC280B00506Open in IMG/M
3300027862|Ga0209701_10170041All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1318Open in IMG/M
3300028037|Ga0265349_1017034All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium → unclassified Mesorhizobium → Mesorhizobium sp. LCM 4577651Open in IMG/M
3300028380|Ga0268265_10542389All Organisms → cellular organisms → Bacteria1103Open in IMG/M
3300028807|Ga0307305_10118386All Organisms → cellular organisms → Bacteria1224Open in IMG/M
3300028884|Ga0307308_10252971All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales844Open in IMG/M
3300031057|Ga0170834_104220453All Organisms → cellular organisms → Bacteria → Acidobacteria626Open in IMG/M
3300031231|Ga0170824_124823832All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium → unclassified Mesorhizobium → Mesorhizobium sp. LSJC280B00621Open in IMG/M
3300031234|Ga0302325_13359998All Organisms → cellular organisms → Bacteria506Open in IMG/M
3300031446|Ga0170820_16339728All Organisms → cellular organisms → Bacteria → Acidobacteria547Open in IMG/M
3300031823|Ga0307478_10777197All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium → unclassified Mesorhizobium → Mesorhizobium sp. LSJC280B00802Open in IMG/M
3300031939|Ga0308174_11807064All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium525Open in IMG/M
3300031962|Ga0307479_10854900All Organisms → cellular organisms → Bacteria884Open in IMG/M
3300031962|Ga0307479_11381743All Organisms → cellular organisms → Bacteria → Acidobacteria663Open in IMG/M
3300032180|Ga0307471_100220557All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1919Open in IMG/M
3300032180|Ga0307471_100307322All Organisms → cellular organisms → Bacteria → Acidobacteria1676Open in IMG/M
3300032180|Ga0307471_100578597Not Available1280Open in IMG/M
3300032770|Ga0335085_10626417All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium1207Open in IMG/M
3300032783|Ga0335079_11839661All Organisms → cellular organisms → Bacteria → Acidobacteria588Open in IMG/M
3300032829|Ga0335070_10564674All Organisms → cellular organisms → Bacteria1073Open in IMG/M
3300032893|Ga0335069_10546079All Organisms → cellular organisms → Bacteria → Acidobacteria1337Open in IMG/M
3300032897|Ga0335071_12021728All Organisms → cellular organisms → Bacteria → Acidobacteria519Open in IMG/M


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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil11.76%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil7.56%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil6.72%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil6.72%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil6.72%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere6.72%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil5.04%
SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Soil4.20%
PeatlandEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Peatland2.52%
Freshwater SedimentEnvironmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment2.52%
Peatlands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil2.52%
Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil2.52%
Tropical PeatlandEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland2.52%
Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil2.52%
Corn RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere2.52%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere2.52%
Bog Forest SoilEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil1.68%
Agricultural SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil1.68%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil1.68%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere1.68%
Miscanthus RhizosphereHost-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere1.68%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere1.68%
WatershedsEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds0.84%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil0.84%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil0.84%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil0.84%
PermafrostEnvironmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost0.84%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil0.84%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural → Soil0.84%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere0.84%
Agricultural SoilEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil0.84%
PalsaEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa0.84%
Termite GutHost-Associated → Arthropoda → Digestive System → Gut → Unclassified → Termite Gut0.84%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere0.84%
Corn, Switchgrass And Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere0.84%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere0.84%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere0.84%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere0.84%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere0.84%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300002245Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)EnvironmentalOpen in IMG/M
3300002459Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6Host-AssociatedOpen in IMG/M
3300004080Coassembly of ECP04_OM1, ECP04_OM2, ECP04_OM3EnvironmentalOpen in IMG/M
3300004091Coassembly of ECP14_OM1, ECP14_OM2, ECP14_OM3EnvironmentalOpen in IMG/M
3300004973Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 19 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300005167Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121EnvironmentalOpen in IMG/M
3300005332Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300005345Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaGEnvironmentalOpen in IMG/M
3300005354Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaGHost-AssociatedOpen in IMG/M
3300005364Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaGHost-AssociatedOpen in IMG/M
3300005365Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaGEnvironmentalOpen in IMG/M
3300005435Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaGEnvironmentalOpen in IMG/M
3300005437Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaGEnvironmentalOpen in IMG/M
3300005450Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_131EnvironmentalOpen in IMG/M
3300005457Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaGHost-AssociatedOpen in IMG/M
3300005459Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2Host-AssociatedOpen in IMG/M
3300005467Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaGEnvironmentalOpen in IMG/M
3300005468Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaGEnvironmentalOpen in IMG/M
3300005557Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153EnvironmentalOpen in IMG/M
3300005561Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148EnvironmentalOpen in IMG/M
3300005568Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_152EnvironmentalOpen in IMG/M
3300005587Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_103EnvironmentalOpen in IMG/M
3300005834Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2Host-AssociatedOpen in IMG/M
3300006046Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101EnvironmentalOpen in IMG/M
3300006059Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2012EnvironmentalOpen in IMG/M
3300006175Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaGEnvironmentalOpen in IMG/M
3300006237Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2)Host-AssociatedOpen in IMG/M
3300006358Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2Host-AssociatedOpen in IMG/M
3300006573Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLAC (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300006804Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200EnvironmentalOpen in IMG/M
3300006871Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3Host-AssociatedOpen in IMG/M
3300006954Agricultural soil microbial communities from Georgia to study Nitrogen management - GA ControlEnvironmentalOpen in IMG/M
3300009090Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaGEnvironmentalOpen in IMG/M
3300009101Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaGHost-AssociatedOpen in IMG/M
3300009826Embiratermes neotenicus P1 segment gut microbial communities from Petit-Saut dam, French Guiana - Emb289 P1Host-AssociatedOpen in IMG/M
3300009839Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_a_PC metaGEnvironmentalOpen in IMG/M
3300010048Tropical forest soil microbial communities from Panama - MetaG Plot_11EnvironmentalOpen in IMG/M
3300010358Tropical forest soil microbial communities from Panama - MetaG Plot_3EnvironmentalOpen in IMG/M
3300010364Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09212015EnvironmentalOpen in IMG/M
3300010366Tropical forest soil microbial communities from Panama - MetaG Plot_24EnvironmentalOpen in IMG/M
3300010398Tropical forest soil microbial communities from Panama - MetaG Plot_35EnvironmentalOpen in IMG/M
3300010399Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3EnvironmentalOpen in IMG/M
3300012199Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaGEnvironmentalOpen in IMG/M
3300012200Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaGEnvironmentalOpen in IMG/M
3300012209Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaGEnvironmentalOpen in IMG/M
3300012210Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaGEnvironmentalOpen in IMG/M
3300012211Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaGEnvironmentalOpen in IMG/M
3300012351Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_100_16 metaGEnvironmentalOpen in IMG/M
3300012363Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaGEnvironmentalOpen in IMG/M
3300012917Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaGEnvironmentalOpen in IMG/M
3300012929Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012948Tropical forest soil microbial communities from Panama - MetaG Plot_14EnvironmentalOpen in IMG/M
3300013770Permafrost microbial communities from Nunavut, Canada - A15_5cm_18MEnvironmentalOpen in IMG/M
3300015264Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300017939Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP12_10_MGEnvironmentalOpen in IMG/M
3300017955Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_2EnvironmentalOpen in IMG/M
3300017995Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_1EnvironmentalOpen in IMG/M
3300018006Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_4EnvironmentalOpen in IMG/M
3300018034Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_11_10EnvironmentalOpen in IMG/M
3300018035Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_17_10EnvironmentalOpen in IMG/M
3300018046Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_6_10EnvironmentalOpen in IMG/M
3300018085Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_20_MGEnvironmentalOpen in IMG/M
3300018482Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118EnvironmentalOpen in IMG/M
3300019887Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1c2EnvironmentalOpen in IMG/M
3300019890Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1c1EnvironmentalOpen in IMG/M
3300020010Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L1s2EnvironmentalOpen in IMG/M
3300020022Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1s2EnvironmentalOpen in IMG/M
3300020150Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP10_20_MGEnvironmentalOpen in IMG/M
3300021171Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-MEnvironmentalOpen in IMG/M
3300021178Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-MEnvironmentalOpen in IMG/M
3300021401Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-OEnvironmentalOpen in IMG/M
3300021432Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-MEnvironmentalOpen in IMG/M
3300021475Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-OEnvironmentalOpen in IMG/M
3300021479Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-MEnvironmentalOpen in IMG/M
3300021559Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-MEnvironmentalOpen in IMG/M
3300021560Tropical forest soil microbial communities from Panama - MetaG Plot_4EnvironmentalOpen in IMG/M
3300022717Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-11-M (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300025321Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300025898Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025913Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025915Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025941Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025960Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300026023Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026142Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300027069Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF002 (SPAdes)EnvironmentalOpen in IMG/M
3300027660Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_M3 (SPAdes)EnvironmentalOpen in IMG/M
3300027862Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300028037Soil microbial communities from Maridalen valley, Oslo, Norway - NSE1EnvironmentalOpen in IMG/M
3300028380Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300028807Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_186EnvironmentalOpen in IMG/M
3300028884Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_195EnvironmentalOpen in IMG/M
3300030659Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_a_PC metaG (v2)EnvironmentalOpen in IMG/M
3300031057Oak Coassembly Site 11 - Champenoux / Amance forestEnvironmentalOpen in IMG/M
3300031231Coassembly Site 11 (all samples) - Champenoux / Amance forestEnvironmentalOpen in IMG/M
3300031234Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_2EnvironmentalOpen in IMG/M
3300031446Fir Summer Coassembly Site 11 - Champenoux / Amance forestEnvironmentalOpen in IMG/M
3300031823Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05EnvironmentalOpen in IMG/M
3300031939Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.P.R2EnvironmentalOpen in IMG/M
3300031962Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515EnvironmentalOpen in IMG/M
3300032180Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515EnvironmentalOpen in IMG/M
3300032770Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.5EnvironmentalOpen in IMG/M
3300032783Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.3EnvironmentalOpen in IMG/M
3300032829Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.3EnvironmentalOpen in IMG/M
3300032893Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.1EnvironmentalOpen in IMG/M
3300032897Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.5EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
JGIcombinedJ26739_10066598613300002245Forest SoilELEPHNVHGLQHKGPQKVGTGTMVKVTHSGFAGDVKDATDHGEGWKRVLGWMQAFVEKGETIDTRTS*
JGI24751J29686_1003577413300002459Corn, Switchgrass And Miscanthus RhizosphereKTVVRWELEPRDVHGLRHSGPKKSGTGTLVRLRHQGFAGAPKSAFDHSQGWTRVLAWMQGFVEAGATADSRG*
Ga0062385_1030299813300004080Bog Forest SoilKTVVRWELEPRPVHNLQQKGPQKVGTGTLVRIRHDGFDPATKSAADHGQGWIRVLGWMQAFVEKGETIDTRPTG*
Ga0062387_10088450013300004091Bog Forest SoilHTWKADYASHPKDTVVRWELQPHGVHGLRHSGPQKVGTGTMVKVTHSGFAGDVKDATDHGEGWKRVLGWMQAFVEKGETIDSRSA*
Ga0072322_129828633300004973Peatlands SoilWIASYSGPLKTVVRWELEPREVHGLQHRGPRRVGMGTVVKVRQEGFAGDSQACASHAQGWTRVLGWMQAFVEEGETVDSRIA*
Ga0066672_1045255213300005167SoilLKTVVRWELEPREVHGLQHRGPQKVGTGTVVKIRHSGFAATAPKESVNHAQGWTRVLAWIQAFVEKGETVDTRKAVSA*
Ga0066388_10226941313300005332Tropical Forest SoilRLLVHTWNPSYSEKLKGTVVRWELESRDVHGLHHDGPARVGTGTLVKLVHSGFAGHPDQAKGHGEGWIRVLGWMQAFVENDQTTDSRD*
Ga0066388_10878161213300005332Tropical Forest SoilTWNPSFYHVVKTTVHCELEPRDVHGLQHRGPQRVGTGTFLKVRQEGFAGNLEAAQGHSRGWTRVLGWLQAFVETGATIDSRPAAS*
Ga0070692_1092658013300005345Corn, Switchgrass And Miscanthus RhizosphereKTVVRWELEPRDVHGLQHSGPKKSGTGTLVRLRHQGFAGAPKSAFDHRQGWTRVLAWMQGFVEAGATADSRG*
Ga0070675_100007783113300005354Miscanthus RhizosphereLVHTWIASWTSNLKTVVRWELEPRDVHGLQHSGPKKSGTGTLVRLRHQGFAGAPKSAFDHSQGWTRVLAWMQGFVEAGATADSRG*
Ga0070673_10026533413300005364Switchgrass RhizosphereRSVHGLQQSGPHKMGTGTAVRIIHSGFAGDVQDANDHGEGWKRVLGWMQGFVERGETVDARP*
Ga0070688_10035482823300005365Switchgrass RhizosphereNLKTVVRWELEPRDVHGLRHSGPKKSGTGTLVRLRHQGFAGAPKSAFDHSQGWTRVLAWMQGFVEAGATADSRG*
Ga0070714_10089997713300005435Agricultural SoilEPRSVHGLQHRGPQRVGTGTLVKIRQEGFTGAPEQARSHSEGWTRVLGWMQAFVENGETVETRQPREVA*
Ga0070710_1085423213300005437Corn, Switchgrass And Miscanthus RhizosphereRWELEPHSVHNLQQRGPQKVGTGTLVRLCHSGFAGNVEQVTGHGEGWKRVLGWMQAYVEQGQTSETRD*
Ga0066682_1063536813300005450SoilLEPRDVHGLQHRGPQRVGTGTLVKIRQEGFAGNLEAAQGHSRGWIKVLGWMQAFVERGDTIDTRT*
Ga0070662_10117782523300005457Corn RhizosphereEYLEVDPPRLLVHTWNPDFSKHKKKTVVRWELEPRSVHGLQQSGPHKMGTGTAVRIIHSGFAGDVQDANDHGEGWKRVLGWMQGFVERGETVDARP*
Ga0068867_10205614713300005459Miscanthus RhizosphereSNLKTVVRWELEPRDVHGLQHSGPKKSGTGTLVRLRHQGFAGAPKSAFDHSQGWTRVLAWMQGFVEAGATADSRG*
Ga0070706_100000296483300005467Corn, Switchgrass And Miscanthus RhizosphereLQHRGPQKVGTGTVVKTHQEGFANAPEAARGHAQGWTRILGWMQAFVEKGETVDTRKAAGVS*
Ga0070706_10098377923300005467Corn, Switchgrass And Miscanthus RhizosphereLLVYTWNPSFAHLLKTTVRCELEPRDVHGLQHRGPQRVGTGTLVKIRQEGFAGNLEQAQGHSRGWTLVLGWMQAFIEKGETIDSRN*
Ga0070707_10073696613300005468Corn, Switchgrass And Miscanthus RhizosphereIELEPRDVHGLQHRGPQHRGPQRIGTGTVVKIRHEGFAGDFAQAQGHSVGWVRVLGWMKAFVETGATLDTRSEQTL*
Ga0066704_1038423123300005557SoilTWNPSFAHLLKTTVRCELEPRDVHGLQHRGPQRVGTGTLVKIRQEGFAGNLEQAQGHSRGWTLVLGWMQAFIEKGETIDSRS*
Ga0066704_1043440733300005557SoilQTTVRWELAPHAVHGLQHSGPQKVGTGTMVKLRHEGFASAPKEALNHAQGWTRVLAWMQAFVEKGETLDTRKPASEEQARRNA*
Ga0066699_1027844313300005561SoilEVAPPLLLVYSWTPSWCGSLKTVVRWELEPREVHGLQHRGPQKVGTGTVVKIRHSGFAATAPKESVNHAQGWTRVLAWIQAFVEKGETVDTRKAVSA*
Ga0066699_1125994123300005561SoilRMGTGTLLKMRQDGFAGNIQVIEGHSKGWMKVLGWMQAYIERGETIETRS*
Ga0066703_1051590413300005568SoilAPPLLLVYSWTPSWCGSLKTVVRWELEPREVHGLQHRGPQKVGTGTVVKIRHSGFAATAPKESVNHAQGWTRVLAWIQAFVEKGETVDTRKAVSA*
Ga0066654_1054702013300005587SoilELESRDVHGLHQQGPHRMGTGTLVKIRQDGFAGNFESARDHARGWIKVLGWMQAFVERGETIETRPAATTP*
Ga0068851_1070543623300005834Corn RhizospherePPRLLVHTWNPDFSKHKKKTVVRWELEPRSVHGLQQSGPHKMGTGTAVRIIHSGFAGDVQDANDHGEGWKRVLGWMQGFVERGETVDARP*
Ga0066652_10045291523300006046SoilVHGLQHRGPQRVGTGTLVKIHQEGFVGNLEAATAHSRGWVRVLGWMQSFVEKGETIETRAS*
Ga0075017_10004001923300006059WatershedsLVHTWIASYRDGKSTVVRWELEPRSVHGLQHRGPQKVGTGTLLKIRQEGFAGAPESARAHAEGWTRVLGWMQAFVENGLTIDARKAS*
Ga0070712_10036251413300006175Corn, Switchgrass And Miscanthus RhizosphereNPSYSNLRNTVVRWELEPRDVHGLQSSGPARVGTGTVVKIRHSGFAGDVAQAKGHGEGWVRVLGWAQAFVEKGETVDTRT*
Ga0097621_10141425423300006237Miscanthus RhizosphereYTWNPSFYHVVKTTVRCELEPRDVHGLQSRGPQRVGTGTLLKIRQEGFAGNLEAAQGHSRGWTRVLGWLQAFVETGATIDSRPAASSS*
Ga0068871_10235124623300006358Miscanthus RhizospherePDFSKHKKKTVVRWELEPRPVHALQQSGPHKMGTGTAVRIIHSGFAGDEQDAADHGNGWTRVLGWMQAFVEQGQTIDTRP*
Ga0074055_1101716413300006573SoilPSFSEVAGTVVRWELEPRPVHSLQTRGPQKAGVGTAVKIRHTGFAGNEKAAKDHGEGWKRVLGWMRDFVENDETIDTRK*
Ga0079221_1169759423300006804Agricultural SoilWELEPRTVHGLHRGPPKIGMGTMVKLRHDGFAGIPKEAVNHGEGWKRVLTWMRAFVEQGETVDTRKQVS*
Ga0075434_10111286813300006871Populus RhizosphereVEIDPPRLLVHTWNPSFKTHTKKTVVRWELEARSVHSLQHSGPQKAGTGTVVKIRHSGFAGDVEDATDHGEGWKRVMGWMKAFVETGETIDTRP*
Ga0079219_1048187513300006954Agricultural SoilNPDFSKHKKKTVVRWELEPWPVHGLQQSGPHKMGTGTAVKIIHSGFAGDEKDAADHGNGWTRVLGWMQAFVERGQTIDTR*
Ga0099827_1049040233300009090Vadose Zone SoilLSPRLLVYSWNPSFAHLHNTTVRVELEPRDVHGLQHRGPQRVGTGTLVKIRHEGFAGDFAQAKGHGEGWARVLGWMKAFVETGATLDTRSEQTL*
Ga0105247_1089403313300009101Switchgrass RhizosphereWNPDFSKHKKKTVVRWELEPRSVHGLQQSGPHKMGTGTAVRIIHSGFAGDVQDANDHGEGWKRVLGWMQGFVVRGETVDARP*
Ga0105247_1184675523300009101Switchgrass RhizosphereVHTWNPDFSKHKKKTVVRWELEPRPVHGLQQSGPHKKGTGTALKIIHSGFAGDEKDAADHGNGWTRVLGWMQAFVEQGQTIDTRS*
Ga0123355_1034342533300009826Termite GutPHPVHRIEPSGPHRVGTGTVVKIRHSGFGDPEAAKGHSEGWKRVLGWMQAFLEKNETSETRTA*
Ga0116223_1046092013300009839Peatlands SoilWELEPRNVHGLHHHGPQKVGTGTVVRVRQEGLANAPKAAADHAQGWPRVLGWLQAFVERGETVDSRKT*
Ga0126373_1028403033300010048Tropical Forest SoilNLAETVVRWELEAREVHGLHHAGPQKVGTGTLVRIRHSGFAGNVEQASRHGEGWKRVLSWAQAFVERGETVETRT*
Ga0126373_1121169313300010048Tropical Forest SoilTRGPQRVGTGTFVKIRQEGFAGDFKLAQDHGRGWTRVLGWLQAFVETGATIDSRPAAS*
Ga0126370_1198237413300010358Tropical Forest SoilELEPRDVHGLQHRGPQRVGTGTFLKVRQEGFAGNLEAAQGHSRGWTRVLGWLQAFVETGATIDSRPAAS*
Ga0134066_1043128213300010364Grasslands SoilVYTWNPSFSHTVKTTVRCELESRDVHGLHQQGPHRMGTGTLVKIRQDGFAGNFESARDHARGWIRVLGWMQAFVEKGETIETRPAATTP*
Ga0126379_1288294423300010366Tropical Forest SoilEGREVHGLHQAGPQKVGTGTLVRIRHSGFAGNLEQASKHGEGWKRILTWAQAFVERGETVETRT*
Ga0126379_1344622523300010366Tropical Forest SoilELEAREVHGLHHAGPQKVGTGTLVRIRHSGFAGNVEQASRHGEGWKRVLGWAQAFVERGETVETRI*
Ga0126383_1120816823300010398Tropical Forest SoilDPPRLLVHTWKTSYSNLSETVVRWELEAREVHGLHQAGPQKVGTGTLVRIRHSGFAGDVEQASKHGEGWKRILTWAQAFVERGETVETRT*
Ga0134127_1253518013300010399Terrestrial SoilTVVRWELEPRDVHGLQHQGPGRVGTGTMVKIRHSGFAGNIAAAQGHGQGWIRVLGWMQAFVEKGETVDTRP*
Ga0137383_1019179643300012199Vadose Zone SoilVRWELEPREVHGLQHRGPQKVGMGTMVKIRHSGFAASAPEQSVNHAQGWTRVLGWVQAFVENGETVDTRKPVSA*
Ga0137382_1028581313300012200Vadose Zone SoilVHGLQHRGPQRVGTGTLVKIRQEGFAGNLEAAQGHSRGWIKVLGWMQAFVEKGDTIDTRT
Ga0137379_1119371223300012209Vadose Zone SoilVRCELEPRDVHGLQHSGPHRVGTGTLVKIRQEGFAGNLEQAEGHSRGWTLVLGWMQAYVERGETVDTRTE*
Ga0137379_1129461323300012209Vadose Zone SoilGLQHRGPQRVGTGTLVKIRQEGFAGNLEAAQGHSRGWTLVLGWMQAFVERGETIETRT*
Ga0137378_1012266713300012210Vadose Zone SoilPRDVHGLHQAGTHRVGTGTLVKIRQEGFAGNIQQAQSHSQGWMKVLGWMQAYVERGETVDTRN*
Ga0137377_1183144213300012211Vadose Zone SoilPHRVGTGTLVKIRQEGFAGNLEQAQGHSRGWTLVLGWMQAYVERGETVDTRTE*
Ga0137386_1032374213300012351Vadose Zone SoilGLHQAGTHRVGTGTLVRIRQEGFAGNIQQAQSHSQGWMKVLGWMQAYVERGETVDTRN*
Ga0137390_1076236313300012363Vadose Zone SoilIANFAGNIETVVRWELEPRDVHGLHTSGTHRVGTGTLVKIRQEGFAGNIQAAQDHSRGWMKVLGWMQAYIERGETIETRT*
Ga0137390_1142907423300012363Vadose Zone SoilESREVHGLHQAGPHRVGTGTLVKIRQEGFAGDVQQAQGHSIGWARVLGWLQAFVEKGETVDTR*
Ga0137395_1097387513300012917Vadose Zone SoilELEPRDVHGLLHLGPHRVGTGTLVKIRQEGFAGNLEQAQGHSRGWTLVLGWMQAFIEKGETIDSRS*
Ga0137404_1230438913300012929Vadose Zone SoilEYLEVVPPRLLVHTWLPSYKEHPKKTVVRWELEPRSVHGLQASGPHKMGMGTAVKIQHSGFAGDVKDANDHGEGWKRVMGWMQVFVEQGLTVDTRT*
Ga0126375_1117594113300012948Tropical Forest SoilPREVHGLQAQGPRRTGTGTLVKLRHSGFAGDAKSAADHGNGWKRVLGWMQAYTERGETIESRPPLQKEA*
Ga0120123_113738323300013770PermafrostREVHGLQGPGPKRVGTGTFVKIRHEGFAGNLAAASSHGDGWVRVLGWMQAFVEYGKTIDTR*
Ga0137403_1052462823300015264Vadose Zone SoilVHTWNPSYRPHPKKTVVRWELESRSVHGLQQSGPHKMGTGTAVKIMHSGFAGDEKDASDHGNGWTRVLGWMQAFVEKGETIDSRL*
Ga0187775_1004253933300017939Tropical PeatlandVHTWIATWSGDLKTVVRWELEPRDVRGLQGRGPQRMGTGTMVKLHHTGFAGAPQAAIGHGEGWKRVLGWMQAFLEKGETVDTRKQAEAG
Ga0187817_1019477013300017955Freshwater SedimentRNVHGLLHRGPQRVGTGTMVRVRQEGFANDPKAAADHAQGWTRVLGWMQSFVEKGETVETRS
Ga0187816_1006437313300017995Freshwater SedimentLKTVVRWELEPRNVHGLLHRGPQRVGTGTMVRVRQEGFANDPKAAADHAQGWTRVLGWMQSFVEKGETVEARS
Ga0187804_1037892513300018006Freshwater SedimentKTIVRWELEPQPVHGLQHRGPQKVGTGTVVRVRQQGFAGAPKAAVDHAQGWTRVLGWMQAFVEKGETVDTRG
Ga0187863_1030535913300018034PeatlandIDPPRLLVHTWHADYEQHPKTTVVRWELQPQSVHGLQHGGPQKVGTGTVVKITHSGFAGDVKDANDHGEGWKRVLGWMQAFVEKGETIDTREA
Ga0187875_1050628913300018035PeatlandPPRLLVHTWHADYEEHPKTTVVRWELQPQSVHGLQHGGPQKVGTGTLVKITHSGFAGDVKDANDHGEGWKRVLGWMQAFVEKGETIDSRQG
Ga0187851_1020948323300018046PeatlandPKTTVVRWELQPQSVHGLQHGGPQKVGTGTLVKITHSGFAGDVKDANDHGEGWKRVLGWMQAFVEKGETIDTRET
Ga0187772_1003772853300018085Tropical PeatlandWELEPREVHGLQHRGPQKMGTGTMVRLHHSGFAGYPGALKGHHQGWIKVLGWIQAFVEKGETVDTRSAMSA
Ga0066669_1029544033300018482Grasslands SoilEPRDVHGLQYRGPQRVGTGTLVKIRQEGFAGNLEAATGHSKGWVRVLGWMQAFVERGETIETRT
Ga0193729_105978913300019887SoilVPPRLLVYSWTPSWSESLKTVVRWELEPREVHGLQSRGPQKVGTGTVVKIRHSGFAATAPEQSANHAQGWTRVLAWVQAFVEDGQTVETRKPVSA
Ga0193728_124904423300019890SoilELEPHDVHELQHRGPGKVGTGTLVKIRHEGFAGNVEQAQGHSIGWMKVLGWMQAYVEKGETVDMRDTATPS
Ga0193749_106430313300020010SoilQHRGPQRVGTGTLVKIRQEGFAGNLEAATGHSRGWLKVLGWMQAFVERGETIETRT
Ga0193733_105990913300020022SoilLKTVVRWELEPREVHGLQHRGPQKVGTGTVVKIRHSGFAATAPKESVNHAQGWARVLAWIQAFVEKGETVDTRKAVSA
Ga0193733_120588113300020022SoilWELEPREVHGLQHRGPQKVGTGTVVKIRHSGFAATAPEQSANHAQGWTRVLAWVQAFVESGETVDTRRPVSA
Ga0187768_104634813300020150Tropical PeatlandPLKTIVRWELEARPVHGLHSRGPQKMGTGTMVRLRHSGFSGNLDAAKGHTQGWIRVLGWMQAFVERGETVATRAPVEV
Ga0210405_1058891113300021171SoilIEIDPPHLLVHTWQADFVKHPKNTVVRWELQPHSVHGLQHSGPQKVGTGTMVKITHSGFAGDVKDATDHGEGWKRVLGWMQAFVEKGETIETRTA
Ga0210408_1036337623300021178SoilPQQIHSLQQRGPQKVGTGTLLRVRQEGFATAPKAAADHAQGWMRVLGWMQAFVEKGETVDTRR
Ga0210393_1155977923300021401SoilQTWTASWRADVKTIVRWELEPQTVHGLQHRGPQKVGTGTVVRVRQQGFAGAPKAAVDHAQGWTRVLGWMQAFVEKGETVDTRE
Ga0210384_1068473533300021432SoilRGLKTVVRWELEPKDVHGLQPSGPRRMGRGTRVRVVHRGFAGDGKAAADHGQGWIRVLGWMQGYVELGETVDTRKPASAAS
Ga0210392_1022037113300021475SoilPKDTVVRWELQPHGVHGLQQSGPKKVGTGTMVKITHSGFAGDVKDATDHGEGWKRVLGWMQAFVEKGETIDSRKA
Ga0210410_1022497113300021479SoilKTIVRWELEPQTVHGLQHRGPQKVGTGTVVRVRQQGFAGAPKAAVDHAQGWTRVLGWMQAFIEKGETVDTRE
Ga0210409_1140398613300021559SoilPHLLVHTWQADFVKHPKNTVVRWELQPHSVHGLQHKGPQKVGTGTMVKITHSGFAGDVKDATDHGEGWKRVLGWMQAFVEKGETIETRTA
Ga0126371_1328976633300021560Tropical Forest SoilHRGPQRVGTGTLVKIRQEGFAGNLEAAQGHSRGWVRVLGWLQAFVETDATVDSRPPAS
Ga0242661_115396023300022717SoilPQPVHGLQHRGPQKLGTGTLVRVRQQGFAGAPKAAVDHAQGWTRVLGWMQAFVEKGETVDTRE
Ga0207656_1048967223300025321Corn RhizospherePPRLLVHTWNPDFSKHKKKTVVRWELEPRSVHGLQQSGPHKMGTGTAVRIIHSGFAGDVQDANDHGEGWKRVLGWMQGFVERGETVDARP
Ga0207692_1068843613300025898Corn, Switchgrass And Miscanthus RhizosphereDPPRLLLHSWKPSYQNVHNTVVRWELEAGDMHGLQHAGPARTGTGTMVKLRHSGFAGNIAAAQQHGEGWKRVLGWMQNFVEEGKTIDAREAREVS
Ga0207695_1092829513300025913Corn RhizosphereLLVQTWNPSYGDIHTVVRWELEPRDVHGLQHQGPGRVGTGTVVKIRHTGFAGNIAAARGHGQGWIRVLGWMQAFVEKGETVDTRT
Ga0207693_1032287033300025915Corn, Switchgrass And Miscanthus RhizosphereLLIHTWNPSYSNLRNTVVRWELEPRDVHGLQSSGPARVGTGTVVKIRHSGFAGDVAQAKGHGEGWVRVLGWAQAFVEKGETVDTRT
Ga0207711_1107144313300025941Switchgrass RhizosphereFKTHTKKTVVRWELEARSVHSLQHSGPTKAGTGTVVKIRHSGFAGDVKDANDHGEGWKRVMSWMKAFVETGETIDTRP
Ga0207651_1104992023300025960Switchgrass RhizosphereVVRWELEPRSVHGLQQSGPHKMGTGTAVRIIHSGFAGDVQDANDHGEGWKRVLGWMQGFVERGETVDARP
Ga0207677_1022399933300026023Miscanthus RhizosphereKHKKKTVVRWELEPRSVHGLQQSGPHKMGTGTAVRIIHSGFAGDVQDANDHGEGWKRVLGWMQGFVERGETVDARP
Ga0207698_1006922273300026142Corn RhizosphereLEVDPPRLLVHTWNPDFSKHKKKTVVRWELEPRSVHGLQQSGPHKMGTGTAVRIIHSGFAGDVQDANDHGEGWKRVLG
Ga0208859_100819733300027069Forest SoilVHGLQHRGPQKLGTGTLVRVRQQGFAGAPKAAVDHAQGWTRVLGWMQAFVEKGETVDTRE
Ga0209736_120814413300027660Forest SoilKETVVRWELEPRGVHGLHQTGPRKAGTGTNVTIRHSGFAGNTKSAIGHGEGWKRVLGWMQAFVEKGETVDTRS
Ga0209701_1017004133300027862Vadose Zone SoilDVHGLQHRGPQRVGTGTLVKIRHEGFAGDFAQAKGHGEGWARVLGWMKAFVETGATLDTRSEQTL
Ga0265349_101703413300028037SoilTIVRWELEPQTVHGLQHRGPQKVGTGTVVRVRQQGFAGAPKAAVDHAQGWTRVLGWMQAFVEKGETVDTRE
Ga0268265_1054238923300028380Switchgrass RhizosphereVHTWNPDFSKHKKKTVVRWELEPRSVHGLQQSGPHKMGTGTAVRIIHSGFAGDVQDANDHGEGWKRVLGWMQGFVERGETIDARP
Ga0307305_1011838623300028807SoilLVHTWIASWSGRLSTVVRWELEARSIHGLQHSGPRKTGTGTVVKIRQEGFAGAPEAARGHAEGWTRVLGWMQAFVEKGGTVDTRK
Ga0307308_1025297123300028884SoilVYSWTPSWCGSLKTVVRWELEPREVHGLQHRGPQKVGTGTVVKIRHSGFAATAPKESVNHAQGWTRVLAWIQAFVEKGETVDTRKAVSA
Ga0316363_1016664513300030659Peatlands SoilHGLLHSGPQKVGTGTMVRVRQEGFANDPKAAADHAQGWTRVLGWMQAFVEKGETVETRS
Ga0170834_10422045323300031057Forest SoilRIELEPRDVHGLQHRGPQRVGTGTLVKIRHEGFAGDFVQAKGHGEGWLRVLGWMQSFVETGATVDTRS
Ga0170824_12482383213300031231Forest SoilELEPRDVHGLQARGPARVGTGTVVRIRHSGFAGNVAAAQGHGEGWVRVLGWMQAFVEKGETVETRT
Ga0302325_1335999813300031234PalsaDYEQHPKTTVVRWELEPRSVHGLQHSGPQKVGTGTMLKVTHSGFAGDVKDAADHGEGWKRVLGWMQAFVEKGETVDSRQG
Ga0170820_1633972813300031446Forest SoilLVHTWKADYASHPKDTDVRWELQPHGVHGLQQSGPKKVGTGTMVKITHSGFAGDVKDATDHGEGWKRVLGWMQAFVEKGETIDSRKA
Ga0307478_1077719713300031823Hardwood Forest SoilPRLLIHTWNPSYDPSLKDTVVRWELEPRGVHGLHQTGPRKAGTGTNVTIRHSGFAGNSKAASGHGDGWKKVLGWMQAFVEKGETVDRRS
Ga0308174_1180706423300031939SoilMVQTWNPSYSDVHTVVRWELEPRDVHGLQGQGPARVGTGTVVKIRHSGFARNIAAAQGHSQGWIRVLSWMQAFVEKGETVDTRS
Ga0307479_1085490023300031962Hardwood Forest SoilVDPPRLLVHTWTGSYNPVKTVVRWELEPRTVHGLQHRGPQKVGTGTLVRIRQEGFAGAPDSARGHAEGWTRVLGWMQAFVENGATIDTRKAS
Ga0307479_1138174313300031962Hardwood Forest SoilKNTVVRWELRPHSVHGLQHNGPQKVGTGTMVKITHSGFAGDLKDATDHGEGWKRVLGWMQAFVEKGETIETRTA
Ga0307471_10022055713300032180Hardwood Forest SoilLEVVPHRLLVYSWTPSWSSSLNTVVRWELEPREVHGLQHRGPQKVGVGTMVKIRHSGFAASAPEQAVNHSQGWTRVLGWMQAFVENGETVDTRKPVSA
Ga0307471_10030732213300032180Hardwood Forest SoilEVLGLQGPGPKKVGTGTFVKIRHEGFAGSLAQAKSHGEGWVRVLGWMQAFVEQGKTIDTRSTAGVV
Ga0307471_10057859713300032180Hardwood Forest SoilRWELEPREIHGLQHRGPQKVGTGTVVKIRHSGFAATAPEQSANHAQGWTRVLAWMQAFVEKGETVDTRKPVSA
Ga0335085_1062641713300032770SoilLVHTWITSWTGAMKTVVRWELEPRDVHGLQHRGPRREGTGTLLKIRHTGFDPSTTHAADHGEGWKRVLGWMQAFVEKGETIDTRGQTA
Ga0335079_1183966113300032783SoilGDARKTIVRWELEPTPVHNLQHRGPQKMGTGTMVRVRHEGFAGDVKQVQAHGEGWKRVLGWMQAFVERGETIETRAS
Ga0335070_1056467413300032829SoilNLEPRPVHGLHAGGPQKMGTGTMVKLRHEGFAGNLVEADNHQRGWTRVLGWLQAFVERGETVETRA
Ga0335069_1054607913300032893SoilWAQTLATVVHWNLEPRPVHGLHAGGPQKMGTGTMVKLRHEGFAGNLVEADNHQRGWTRVLGWLQAFVERGETVETRA
Ga0335071_1202172823300032897SoilHTWVASWSGALKTIVSWELEPRGMHNLQHSGPQRTGTGTFVKVRQQGFAGAQKEALDHAKGWTRVLGWMQAFLEKGETVDTRLP

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Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
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