NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome / Metatranscriptome Family F075176

Metagenome / Metatranscriptome Family F075176

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F075176
Family Type Metagenome / Metatranscriptome
Number of Sequences 119
Average Sequence Length 62 residues
Representative Sequence MHRTATRFGLIVTVAVLAAAKVAAQQAPSSAGPHLQPNAGGEAAVKRVVDGIMQPYLAQG
Number of Associated Samples 105
Number of Associated Scaffolds 119

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 87.50 %
% of genes near scaffold ends (potentially truncated) 81.51 %
% of genes from short scaffolds (< 2000 bps) 85.71 %
Associated GOLD sequencing projects 97
AlphaFold2 3D model prediction Yes
3D model pTM-score0.37

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Bacteria (89.916 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil
(20.168 % of family members)
Environment Ontology (ENVO) Unclassified
(40.336 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Plant → Plant rhizosphere
(45.378 % of family members)


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Multiple Sequence Alignments

Select alignment to view:      

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Fibrous Signal Peptide: Yes Secondary Structure distribution: α-helix: 50.00%    β-sheet: 0.00%    Coil/Unstructured: 50.00%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.37
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 119 Family Scaffolds
PF00144Beta-lactamase 4.20
PF00009GTP_EFTU 4.20
PF03734YkuD 3.36
PF10137TIR-like 3.36
PF00903Glyoxalase 2.52
PF13884Peptidase_S74 2.52
PF13414TPR_11 1.68
PF09650PHA_gran_rgn 1.68
PF06877RraB 0.84
PF00583Acetyltransf_1 0.84
PF11158DUF2938 0.84
PF13302Acetyltransf_3 0.84
PF01471PG_binding_1 0.84
PF13484Fer4_16 0.84
PF01344Kelch_1 0.84
PF12838Fer4_7 0.84
PF13231PMT_2 0.84
PF12710HAD 0.84
PF03144GTP_EFTU_D2 0.84

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 119 Family Scaffolds
COG1680CubicO group peptidase, beta-lactamase class C familyDefense mechanisms [V] 4.20
COG1686D-alanyl-D-alanine carboxypeptidaseCell wall/membrane/envelope biogenesis [M] 4.20
COG2367Beta-lactamase class ADefense mechanisms [V] 4.20
COG1376Lipoprotein-anchoring transpeptidase ErfK/SrfKCell wall/membrane/envelope biogenesis [M] 3.36
COG3034Murein L,D-transpeptidase YafKCell wall/membrane/envelope biogenesis [M] 3.36
COG3076Regulator of RNase E activity RraBTranslation, ribosomal structure and biogenesis [J] 0.84

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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms89.92 %
UnclassifiedrootN/A10.08 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
2170459005|F1BAP7Q02H5A2KAll Organisms → cellular organisms → Bacteria500Open in IMG/M
2189573000|GPBTN7E02G3COXAll Organisms → cellular organisms → Bacteria530Open in IMG/M
3300000363|ICChiseqgaiiFebDRAFT_13755543All Organisms → cellular organisms → Bacteria550Open in IMG/M
3300000364|INPhiseqgaiiFebDRAFT_100426616Not Available1122Open in IMG/M
3300000955|JGI1027J12803_100279678Not Available547Open in IMG/M
3300000955|JGI1027J12803_108474027All Organisms → cellular organisms → Bacteria748Open in IMG/M
3300000956|JGI10216J12902_117579144All Organisms → cellular organisms → Bacteria573Open in IMG/M
3300003659|JGI25404J52841_10003722All Organisms → cellular organisms → Bacteria3034Open in IMG/M
3300004153|Ga0063455_101178924All Organisms → cellular organisms → Bacteria573Open in IMG/M
3300004480|Ga0062592_100058437All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium2147Open in IMG/M
3300005169|Ga0066810_10032306All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia942Open in IMG/M
3300005178|Ga0066688_10073107All Organisms → cellular organisms → Bacteria2042Open in IMG/M
3300005186|Ga0066676_11083957All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium529Open in IMG/M
3300005186|Ga0066676_11183379All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium500Open in IMG/M
3300005290|Ga0065712_10007751All Organisms → cellular organisms → Bacteria2551Open in IMG/M
3300005329|Ga0070683_100253306All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium1674Open in IMG/M
3300005332|Ga0066388_103698327All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium781Open in IMG/M
3300005332|Ga0066388_108461089All Organisms → cellular organisms → Bacteria512Open in IMG/M
3300005354|Ga0070675_100356185All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia1298Open in IMG/M
3300005356|Ga0070674_100734403All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia847Open in IMG/M
3300005467|Ga0070706_100953771All Organisms → cellular organisms → Bacteria792Open in IMG/M
3300005577|Ga0068857_100262400All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium1586Open in IMG/M
3300005614|Ga0068856_101694599All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia645Open in IMG/M
3300005764|Ga0066903_102104014All Organisms → cellular organisms → Bacteria1086Open in IMG/M
3300005764|Ga0066903_104409680All Organisms → cellular organisms → Bacteria751Open in IMG/M
3300005937|Ga0081455_10422369All Organisms → cellular organisms → Bacteria919Open in IMG/M
3300006175|Ga0070712_100460694All Organisms → cellular organisms → Bacteria1060Open in IMG/M
3300006797|Ga0066659_10166138All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia1584Open in IMG/M
3300007255|Ga0099791_10275553All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium800Open in IMG/M
3300007265|Ga0099794_10259593All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium897Open in IMG/M
3300009098|Ga0105245_10469987All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia1269Open in IMG/M
3300009100|Ga0075418_10357942All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium1558Open in IMG/M
3300009100|Ga0075418_11692999All Organisms → cellular organisms → Bacteria687Open in IMG/M
3300009162|Ga0075423_11364318All Organisms → cellular organisms → Bacteria758Open in IMG/M
3300009174|Ga0105241_10719907All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia913Open in IMG/M
3300010038|Ga0126315_10568041All Organisms → cellular organisms → Bacteria729Open in IMG/M
3300010043|Ga0126380_10830470All Organisms → cellular organisms → Bacteria759Open in IMG/M
3300010366|Ga0126379_13804699All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia506Open in IMG/M
3300010400|Ga0134122_12037757All Organisms → cellular organisms → Bacteria613Open in IMG/M
3300012198|Ga0137364_10384891Not Available1049Open in IMG/M
3300012198|Ga0137364_10388002All Organisms → cellular organisms → Bacteria1044Open in IMG/M
3300012199|Ga0137383_11074483All Organisms → cellular organisms → Bacteria584Open in IMG/M
3300012201|Ga0137365_10483320All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium911Open in IMG/M
3300012203|Ga0137399_10073555All Organisms → cellular organisms → Bacteria2570Open in IMG/M
3300012203|Ga0137399_10277021All Organisms → cellular organisms → Bacteria1381Open in IMG/M
3300012204|Ga0137374_10955942All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium624Open in IMG/M
3300012208|Ga0137376_10852628All Organisms → cellular organisms → Bacteria783Open in IMG/M
3300012208|Ga0137376_11334771All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium608Open in IMG/M
3300012285|Ga0137370_10393369All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium839Open in IMG/M
3300012285|Ga0137370_10608762All Organisms → cellular organisms → Bacteria675Open in IMG/M
3300012354|Ga0137366_10209760All Organisms → cellular organisms → Bacteria1453Open in IMG/M
3300012355|Ga0137369_10795037All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium645Open in IMG/M
3300012359|Ga0137385_11350904All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium576Open in IMG/M
3300012361|Ga0137360_10113871All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia2092Open in IMG/M
3300012582|Ga0137358_10446504All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia873Open in IMG/M
3300012685|Ga0137397_10868535All Organisms → cellular organisms → Bacteria669Open in IMG/M
3300012910|Ga0157308_10027255All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia1335Open in IMG/M
3300012929|Ga0137404_11020360All Organisms → cellular organisms → Bacteria757Open in IMG/M
3300012930|Ga0137407_11600010All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium620Open in IMG/M
3300012957|Ga0164303_10359290All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia884Open in IMG/M
3300012958|Ga0164299_10298244All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia989Open in IMG/M
3300012977|Ga0134087_10061348All Organisms → cellular organisms → Bacteria1505Open in IMG/M
3300012986|Ga0164304_11267306All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia599Open in IMG/M
3300013296|Ga0157374_11568118All Organisms → cellular organisms → Bacteria682Open in IMG/M
3300014326|Ga0157380_11501145All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia727Open in IMG/M
3300014968|Ga0157379_11671053All Organisms → cellular organisms → Bacteria623Open in IMG/M
3300015371|Ga0132258_13264881All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium1117Open in IMG/M
3300015374|Ga0132255_100148594All Organisms → cellular organisms → Bacteria3264Open in IMG/M
3300015374|Ga0132255_100975586All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium1270Open in IMG/M
3300016371|Ga0182034_10731536All Organisms → cellular organisms → Bacteria843Open in IMG/M
3300018061|Ga0184619_10447194All Organisms → cellular organisms → Bacteria577Open in IMG/M
3300018066|Ga0184617_1182631All Organisms → cellular organisms → Bacteria623Open in IMG/M
3300018067|Ga0184611_1306099All Organisms → cellular organisms → Bacteria551Open in IMG/M
3300018433|Ga0066667_11903833All Organisms → cellular organisms → Bacteria542Open in IMG/M
3300019789|Ga0137408_1449485All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium4889Open in IMG/M
3300019879|Ga0193723_1004997All Organisms → cellular organisms → Bacteria → Proteobacteria4543Open in IMG/M
3300019883|Ga0193725_1008653All Organisms → cellular organisms → Bacteria2902Open in IMG/M
3300019883|Ga0193725_1057942All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia977Open in IMG/M
3300020015|Ga0193734_1059322All Organisms → cellular organisms → Bacteria691Open in IMG/M
3300021411|Ga0193709_1049156All Organisms → cellular organisms → Bacteria984Open in IMG/M
3300021418|Ga0193695_1040490All Organisms → cellular organisms → Bacteria1008Open in IMG/M
3300021510|Ga0222621_1115523All Organisms → cellular organisms → Bacteria570Open in IMG/M
3300021560|Ga0126371_12564647All Organisms → cellular organisms → Bacteria617Open in IMG/M
3300024283|Ga0247670_1080228All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia597Open in IMG/M
3300025910|Ga0207684_11489253All Organisms → cellular organisms → Bacteria551Open in IMG/M
3300025923|Ga0207681_10746253All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia816Open in IMG/M
3300025929|Ga0207664_10535389All Organisms → cellular organisms → Bacteria1050Open in IMG/M
3300025934|Ga0207686_10718999All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia795Open in IMG/M
3300026067|Ga0207678_11677940All Organisms → cellular organisms → Bacteria558Open in IMG/M
3300026078|Ga0207702_12303586Not Available526Open in IMG/M
3300026116|Ga0207674_11509989All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium641Open in IMG/M
3300026324|Ga0209470_1382551All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium503Open in IMG/M
3300026528|Ga0209378_1248102All Organisms → cellular organisms → Bacteria565Open in IMG/M
3300027655|Ga0209388_1126771All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium727Open in IMG/M
3300028536|Ga0137415_10517947All Organisms → cellular organisms → Bacteria1001Open in IMG/M
3300028768|Ga0307280_10361618All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium537Open in IMG/M
3300028807|Ga0307305_10095844All Organisms → cellular organisms → Bacteria1371Open in IMG/M
3300028807|Ga0307305_10507668All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium540Open in IMG/M
3300028828|Ga0307312_10960036All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium566Open in IMG/M
3300028885|Ga0307304_10289561All Organisms → cellular organisms → Bacteria721Open in IMG/M
3300030945|Ga0075373_11582338Not Available662Open in IMG/M
3300031122|Ga0170822_11771971All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia733Open in IMG/M
3300031446|Ga0170820_15461019All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium719Open in IMG/M
3300031446|Ga0170820_17299697All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia579Open in IMG/M
3300031719|Ga0306917_10192765All Organisms → cellular organisms → Bacteria1539Open in IMG/M
3300031744|Ga0306918_11445881All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium526Open in IMG/M
3300031942|Ga0310916_11513012All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium547Open in IMG/M
3300032001|Ga0306922_10777650All Organisms → cellular organisms → Bacteria1002Open in IMG/M
3300032012|Ga0310902_10674727All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium694Open in IMG/M
3300032012|Ga0310902_11226556All Organisms → cellular organisms → Bacteria529Open in IMG/M
3300033289|Ga0310914_10772481All Organisms → cellular organisms → Bacteria858Open in IMG/M
3300033551|Ga0247830_10833107All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia734Open in IMG/M


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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil20.17%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil14.29%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil9.24%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil3.36%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil3.36%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural → Soil3.36%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil3.36%
Corn RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere3.36%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere3.36%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment2.52%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil2.52%
Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil2.52%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere2.52%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere2.52%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil1.68%
Grass SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grass Soil1.68%
SoilEnvironmental → Terrestrial → Soil → Loam → Grasslands → Soil1.68%
Tabebuia Heterophylla RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere1.68%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere1.68%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere1.68%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere1.68%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment0.84%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil0.84%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil0.84%
Serpentine SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil0.84%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil0.84%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil0.84%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Corn, Switchgrass And Miscanthus Rhizosphere0.84%
Corn RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere0.84%
Agricultural SoilEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil0.84%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Miscanthus Rhizosphere0.84%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere0.84%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere0.84%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere0.84%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere0.84%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
2170459005Grass soil microbial communities from Rothamsted Park, UK - July 2009 direct MP BIO1O1 lysis 0-21cmEnvironmentalOpen in IMG/M
2189573000Grass soil microbial communities from Rothamsted Park, UK - July 2010 direct MP BIO 1O1 lysis 0-21cm (T0 for microcosms)EnvironmentalOpen in IMG/M
3300000363Soil microbial communities from Great Prairies - Iowa, Continuous Corn soilEnvironmentalOpen in IMG/M
3300000364Soil microbial communities from Great Prairies - Iowa, Native Prairie soilEnvironmentalOpen in IMG/M
3300000955Soil microbial communities from Great Prairies - Iowa, Native Prairie soilEnvironmentalOpen in IMG/M
3300000956Soil microbial communities from Great Prairies - Kansas, Native Prairie soilEnvironmentalOpen in IMG/M
3300003659Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1Host-AssociatedOpen in IMG/M
3300004081Grasslands soil microbial communities from Hopland, California, USA - 2 (version 2)EnvironmentalOpen in IMG/M
3300004153Grasslands soil microbial communities from Hopland, California, USA (version 2)EnvironmentalOpen in IMG/M
3300004480Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4EnvironmentalOpen in IMG/M
3300005169Soil and rhizosphere microbial communities from Laval, Canada - mgHPAEnvironmentalOpen in IMG/M
3300005178Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137EnvironmentalOpen in IMG/M
3300005186Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125EnvironmentalOpen in IMG/M
3300005290Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1Host-AssociatedOpen in IMG/M
3300005329Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaGEnvironmentalOpen in IMG/M
3300005332Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300005354Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaGHost-AssociatedOpen in IMG/M
3300005356Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaGHost-AssociatedOpen in IMG/M
3300005467Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaGEnvironmentalOpen in IMG/M
3300005577Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2Host-AssociatedOpen in IMG/M
3300005614Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2Host-AssociatedOpen in IMG/M
3300005764Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)EnvironmentalOpen in IMG/M
3300005937Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1Host-AssociatedOpen in IMG/M
3300006175Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaGEnvironmentalOpen in IMG/M
3300006797Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108EnvironmentalOpen in IMG/M
3300007255Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1EnvironmentalOpen in IMG/M
3300007265Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1EnvironmentalOpen in IMG/M
3300009094Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)Host-AssociatedOpen in IMG/M
3300009098Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaGHost-AssociatedOpen in IMG/M
3300009100Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2Host-AssociatedOpen in IMG/M
3300009162Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2Host-AssociatedOpen in IMG/M
3300009174Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaGHost-AssociatedOpen in IMG/M
3300010038Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot106EnvironmentalOpen in IMG/M
3300010043Tropical forest soil microbial communities from Panama - MetaG Plot_26EnvironmentalOpen in IMG/M
3300010366Tropical forest soil microbial communities from Panama - MetaG Plot_24EnvironmentalOpen in IMG/M
3300010400Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2EnvironmentalOpen in IMG/M
3300012198Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaGEnvironmentalOpen in IMG/M
3300012199Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaGEnvironmentalOpen in IMG/M
3300012201Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaGEnvironmentalOpen in IMG/M
3300012203Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaGEnvironmentalOpen in IMG/M
3300012204Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_100_16 metaGEnvironmentalOpen in IMG/M
3300012208Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaGEnvironmentalOpen in IMG/M
3300012285Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_20_16 metaGEnvironmentalOpen in IMG/M
3300012354Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_60_16 metaGEnvironmentalOpen in IMG/M
3300012355Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_113_16 metaGEnvironmentalOpen in IMG/M
3300012359Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaGEnvironmentalOpen in IMG/M
3300012361Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaGEnvironmentalOpen in IMG/M
3300012582Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaGEnvironmentalOpen in IMG/M
3300012685Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaGEnvironmentalOpen in IMG/M
3300012910Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S198-509B-2EnvironmentalOpen in IMG/M
3300012929Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012930Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012957Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MGEnvironmentalOpen in IMG/M
3300012958Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MGEnvironmentalOpen in IMG/M
3300012975Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_11112015EnvironmentalOpen in IMG/M
3300012977Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_5_24_1 metaGEnvironmentalOpen in IMG/M
3300012986Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MGEnvironmentalOpen in IMG/M
3300013296Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaGHost-AssociatedOpen in IMG/M
3300014326Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaGHost-AssociatedOpen in IMG/M
3300014968Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaGHost-AssociatedOpen in IMG/M
3300015371Combined assembly of cpr5 and col0 rhizosphere and soilHost-AssociatedOpen in IMG/M
3300015374Col-0 rhizosphere combined assemblyHost-AssociatedOpen in IMG/M
3300016371Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172EnvironmentalOpen in IMG/M
3300018061Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_b1EnvironmentalOpen in IMG/M
3300018066Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_5_b1EnvironmentalOpen in IMG/M
3300018067Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_5_coexEnvironmentalOpen in IMG/M
3300018433Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116EnvironmentalOpen in IMG/M
3300019789Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (PacBio error correction)EnvironmentalOpen in IMG/M
3300019878Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2m2EnvironmentalOpen in IMG/M
3300019879Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2m2EnvironmentalOpen in IMG/M
3300019883Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2a2EnvironmentalOpen in IMG/M
3300020015Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1m1EnvironmentalOpen in IMG/M
3300021411Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H3c2EnvironmentalOpen in IMG/M
3300021418Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L3s2EnvironmentalOpen in IMG/M
3300021510Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_coexEnvironmentalOpen in IMG/M
3300021560Tropical forest soil microbial communities from Panama - MetaG Plot_4EnvironmentalOpen in IMG/M
3300024283Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK11EnvironmentalOpen in IMG/M
3300025910Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025923Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025929Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025930Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)EnvironmentalOpen in IMG/M
3300025934Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300026067Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300026078Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026116Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026324Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125 (SPAdes)EnvironmentalOpen in IMG/M
3300026528Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156 (SPAdes)EnvironmentalOpen in IMG/M
3300027655Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1 (SPAdes)EnvironmentalOpen in IMG/M
3300028536Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300028768Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_119EnvironmentalOpen in IMG/M
3300028807Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_186EnvironmentalOpen in IMG/M
3300028819Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_153EnvironmentalOpen in IMG/M
3300028828Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_202EnvironmentalOpen in IMG/M
3300028885Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_185EnvironmentalOpen in IMG/M
3300030945Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - FA10 EcM (Eukaryote Community Metatranscriptome)EnvironmentalOpen in IMG/M
3300031122Oak Spring Coassembly Site 11 - Champenoux / Amance forestEnvironmentalOpen in IMG/M
3300031446Fir Summer Coassembly Site 11 - Champenoux / Amance forestEnvironmentalOpen in IMG/M
3300031719Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)EnvironmentalOpen in IMG/M
3300031744Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)EnvironmentalOpen in IMG/M
3300031942Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176EnvironmentalOpen in IMG/M
3300032001Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)EnvironmentalOpen in IMG/M
3300032012Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D3EnvironmentalOpen in IMG/M
3300032211Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D1EnvironmentalOpen in IMG/M
3300033289Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108EnvironmentalOpen in IMG/M
3300033551Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day5EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
E41_018929302170459005Grass SoilLPAEEIMHRTAARFGLIVTIAVLAAAKVAAQQAPSAAGQNLQPDSGGEEAAVKRVVDGIIQPYLAQ
N55_033659302189573000Grass SoilMLRIATCFGVIVTVTALAVANVVAQQAPSAAGPHLQPDAGGEEAAVKRVVDGIMQPY
ICChiseqgaiiFebDRAFT_1375554313300000363SoilMHRATRFGLIVTVAVLAAANATAQQAPSAAGQNLQPDAGGEEAAVKRVVDGIMQPYLAQGQRMA
INPhiseqgaiiFebDRAFT_10042661613300000364SoilMHCIAARFGLIVTGALLAAAKVAAQQAPSAAGPHLQSKAGGEPATVKRVVDGIIGGNSVSDC*
JGI1027J12803_10027967813300000955SoilMHRIATRSGLIVSVALLAAANVAAQQAPSDAGPRLQPNAGGEAAAVKRVV
JGI1027J12803_10847402713300000955SoilMHRSATRFGLILTVAVLAAANADAQQPPSAAGPNLQANAGSDEAAVKQVVDSIMQPYLAQ
JGI10216J12902_11757914423300000956SoilLPGEESAHRTAVGFGLIVTVAVLAAAKVVAQQEPSAVGPHLQPNAGGEAAAVRRVVDGIMQPYSA*
JGI25404J52841_1000372213300003659Tabebuia Heterophylla RhizosphereMHRTATRVGLIVTVALVAAAKVAAQQAPAASPRAQPDDGGEAAVVKRVVDG
Ga0063454_10169931923300004081SoilLFKEKLMLRVATRFRLIVTLAVFAVANLAAQEAPSHAGQNLSPGASGEEATVKRVVDSIMQPYLAQGQRAAGGHVWK
Ga0063455_10117892423300004153SoilMLRVATRFRLIVTLAVFAVANLAAQEAPSHAGQNLPPDAGGEEATVKRVVDSIMQPYLAQGQRAAGG
Ga0062592_10005843713300004480SoilMHRATRFGLIVTVAVLAAANATAQQAPSAAGQNLQPDAGGEEAAVKRVV
Ga0066810_1003230623300005169SoilMHRTATRFGLIVIVAVLAAAKIAAQEAASDAGQNLQPNADGEEAAVKRTIDGIIQPYLAQGQRMAGGHPWKRSPF
Ga0066688_1007310733300005178SoilMHRTATRFGLIVTVAVLAAAKVAAQQAPSSAGPHLQPNAGGEAAVKRVVDGIMQPYLA
Ga0066676_1108395713300005186SoilMHRTATRFGLIVTVAVLAAAKVAAQQASSSAGPHLQPNAGGEAAVKRVVDGIMQPYLAQGQR
Ga0066676_1118337913300005186SoilMHRTATRFGLVVTVALLAAATVAAQQAPSAAGPHLQPDAGGEAAAVKRVVDGIMQPYLAQGQRRA
Ga0065712_1000775143300005290Miscanthus RhizosphereMYRTATCFGVIVMLAALGVAKVAAQEAPPSAGQSLQLNEKGEEAAVKRVVDGIMQPYLAQGQRMAGGHPWKRSPFL
Ga0070683_10025330613300005329Corn RhizosphereMYRIATCLVLIVTIAVLAAANVVAQEGTSSAGQNLEPNAGGEEAAVKRVVDGIMNP
Ga0066388_10369832713300005332Tropical Forest SoilMNRTASRFVLIVTVAALTAANVIAQEAGPAAGQNSQPNAGVEEAVVKRVVDGIMQP
Ga0066388_10846108913300005332Tropical Forest SoilMDHINTRFILVVIFAALAVAKVVAQEDPSSSDPSSEPNAGGEEAAVKRVVDGIMQPYLAQ
Ga0070675_10035618523300005354Miscanthus RhizosphereMYRTATRFGVIVIVAALGVAKVAAQEAPPSAGQSLQLEEGEEAAVKRVVDGIMQPYLAQGQRMAG
Ga0070674_10073440313300005356Miscanthus RhizosphereMHRIAACFGVIVTVTAFAVANVVAQQAPSAAGPHLQPDAGDEEAAVKRVVDGI
Ga0070706_10095377123300005467Corn, Switchgrass And Miscanthus RhizosphereMHRTAIRFALIVTVALLAAAKLAAQQAPSAAGPRLQPDDGGEAAVVKRVIDGIMQPYLAQGQHTTRGGTWR
Ga0068857_10026240013300005577Corn RhizosphereMYRIATCLVLIVTIAVLAAANVVAQEGTSSAGQNLEPNAGGEEAAVKRVVDGIMNPYLAQRQRTAG
Ga0068856_10169459913300005614Corn RhizosphereMYRTATRFGVIVIVAALGVAKVAAQEAPPSAGQSLQLEEGEEAAVKRVVDGIMQPYLAQGQRM
Ga0066903_10210401433300005764Tropical Forest SoilMHRTATRLGLIVTVAIFAAAKVAAQETSSTEGSNLPPNAEAEEAAVKRIVDGIMQPYLTQEQRTV
Ga0066903_10440968023300005764Tropical Forest SoilMGQIAVRFGLIVTVAALAAANVVAQEEPSPAGRDLEGNAGGEEGAVKQVVDGIMQPYLAQRQR
Ga0081455_1042236913300005937Tabebuia Heterophylla RhizosphereMHRTAARFDLIVTLVLFAAANIAAQQALSATDADVEPNTGGEAAAVRRVVDGIMQPYLAQRQRTSPRGQRWN
Ga0070712_10046069413300006175Corn, Switchgrass And Miscanthus RhizosphereMHRIVIRLRLILVVAVLAAANADAQQPPSAASPNLQANAGGDEAAVKRVVDSIM
Ga0066659_1016613833300006797SoilMHRTATRFGLIVTVALLAAATVAAQRAPSAAGPHLQPDAGGQAAAVKRVVDGIMQPYLAQ
Ga0099791_1027555323300007255Vadose Zone SoilMHRTATRFGLIVAVAVLAATKVAAQQAPSGAGPHLQPNAGGEVAAVKRVVDGIM*
Ga0099794_1025959313300007265Vadose Zone SoilMHRTATRFGLIVAVAVLAAAKVAAQQAPSGAGPHLQPNAGGEAAAVKRVVDGIMQP*
Ga0111539_1250408523300009094Populus RhizosphereVLKEEIMHPIARRFRLIVTLTLFAGAQLTTQEAASDAGQTLQSDAGGEEATVKRVVDSIMQPYLA
Ga0105245_1046998723300009098Miscanthus RhizosphereMYRTATCFGVIVMLAALGVAKVAAQEAPPSAGQSLQLNEKGEEAAVKRVVDGIMQPYLAQGQRMAGGHPW
Ga0075418_1035794233300009100Populus RhizosphereMNRTATRFVLIVTVAALTAANVIGKEPSSAAGQNSQPNAGGEEAVVKRVVDGIMQPYLAQGQRTAGGHRWSR
Ga0075418_1169299913300009100Populus RhizosphereMDRNITRLGLIITVALLKVANVAAQEAPSAAAPNLQPNAGGEEAEVKRVVDGIMQPYLAQEQRSSPRGGVWRRA
Ga0075423_1136431813300009162Populus RhizosphereMNRTATRFVLIVTVAALTAANVIGKEPRPAAGQNSQPNAGGEEAVVKRVVDGIMQPYLAQGQRTAGGHRWSRSPDWG
Ga0105241_1071990723300009174Corn RhizosphereMYRTATRFGVIVIVAALGVAKVAAQEAPPRAGQSLQVEEGQETAVKGVDDGNMQTYLAQGQRM
Ga0126315_1056804113300010038Serpentine SoilMHRFTCHFGLIVTVAVLAAAKVAAQEAPSAASQILQPNAGDEAAAVKRVVDGIMQPYLAEGERMAGGHVWRRSP
Ga0126380_1083047013300010043Tropical Forest SoilMYRIATRFGLILTVAVLVAANVDAQQPTSAAGPNLQPNAGSDEAAVKRVVDGIMQPYLAQGQRMAGGRRWSRSPDLG
Ga0126379_1380469923300010366Tropical Forest SoilMGRAATRFVSIVTIVVFALTKAAAQQAPSPAVQNLQPNASGEEEAAKQVVDGIMQPYLAQRQR
Ga0134122_1203775723300010400Terrestrial SoilMHRIAACFGVIVTVAAFAVANVVAQQAPSAAGPHLQPNAGGEEAAVKRVVDGIMQPYLAQGQRMAGGHPWKRSPF
Ga0137364_1038489113300012198Vadose Zone SoilMHRTVTRFGLIVTVALLTAANVAAQQAPSAAGPRLQPDAGGQAAVVKRVVDGIMQPYLAQGQRGLPR
Ga0137364_1038800223300012198Vadose Zone SoilMHRIATRFGLIVTVAALGAANIVAQQAPSDASPDLQPNAGDEEAAVKRVVDGIMQPYFGPGTT*
Ga0137383_1107448323300012199Vadose Zone SoilMHRTATRFGLIVTVALLAAAKVAAQQAPSAAGPHLQPDAGGEAAAVKRTVDGIMQPYLAQGQRRARGRTWS
Ga0137365_1048332023300012201Vadose Zone SoilMHRTATRFGLIVTVAVLAAAKVAAQQAPSSAGPHLQPNAGGEAAVKRVVDGIMQPYLAQGQRS
Ga0137399_1007355543300012203Vadose Zone SoilMHRIATCFGVIVTVTALAVAKVAAQEAPSGAGQNLQPNPGDEETIVKR*
Ga0137399_1027702123300012203Vadose Zone SoilLKKIMDRTTTCFALIVTVAVLAATNIVAQQAPSDAGPDLQPNAGGEETAVKRLVDGIMQPYLAQGQRNAGGRRWS*
Ga0137374_1095594213300012204Vadose Zone SoilMHRIATRFGLIVTVALLAAAKVAAQQAPSAAGPHLQPNAGGEAAAVKRVVDGIMQPYLAQGQRRPGGRGWSR
Ga0137376_1085262823300012208Vadose Zone SoilMHRSATRFGLIVTVALLAAATVAAQRAPSAAGPHLQPDAGGQAAAVKRVVDGIMQPYLAQGQRRAPPWPAMEAIS*
Ga0137376_1133477113300012208Vadose Zone SoilMHRTATRFGLIVTVAVLAAAKVAAQQAPSSAGPHLQPNAGGEAAVKRVVDGIMQPYLAQG
Ga0137370_1039336913300012285Vadose Zone SoilMHRTVTRFGLIVTVALLTAANVAAQQAPSAVGPRLQPDAGGEAAVVKRVVDGIMQPYLAQGQRNP
Ga0137370_1060876223300012285Vadose Zone SoilMHRTATRFGLIVTVALLAAATVAAQRAPSAAGPHLQPDAGGQAAAVKRVVDGHHAAVLGPGTT*
Ga0137366_1020976013300012354Vadose Zone SoilMHRNATRFSLIVTVAVLAAARVAAQQAPSHAGPHLQPNAGGEAAAVKRVV
Ga0137369_1079503713300012355Vadose Zone SoilMHRIATRFGLIVTVALLAAAKVAAQQAPSAAGPHLQPNAGGEAAAVKR
Ga0137385_1135090423300012359Vadose Zone SoilLSEEEIMHRTATRFGLIVTVAVLAAVKVAAQQAPSATGPNAGGEAAAVKRVVDGIMQP
Ga0137360_1011387143300012361Vadose Zone SoilMHRNATRFSLIVTVAVLAAGRVAAQQAPAAAGPHLEPNAGGEAAAVKRVVDGI
Ga0137358_1044650413300012582Vadose Zone SoilMHRIATCFGVIVTVTALAVANVAAQQAPSAADQNLQSDAGGEEAAVKRVVDGIMQPYLAQ
Ga0137397_1086853513300012685Vadose Zone SoilMHRIVTRFRLIVIVAVLATAKVAAQQALSAAGPDLQPNAGGEETAVKRLVDGIMQPYLAQ
Ga0157308_1002725513300012910SoilMYRTATCFGVIVMLAALGVAKVAAQEAPPSAGQSLQLNEKGEEAAVKRVVDGIMQPYLAQGQR
Ga0137404_1102036023300012929Vadose Zone SoilMYRTATRFSLIVTVAVLAAAKVAAQQAPSAAGPHLQPNAGGEAAAVKRVVDGIMQPYLAQEQH
Ga0137407_1160001023300012930Vadose Zone SoilMHRTATRFGLIVTVAVLAAAKVAAQQAPSAAKLHVQPNAGGEAVKRVVDGIMQPYLAQGQ
Ga0164303_1035929013300012957SoilMHRIATFFGVILTVAALAVAKVAAQEAPSGVAQNLQPDAGGDEATIKRVVD
Ga0164299_1029824413300012958SoilMHRTATCFGLIVIVAVLAAAKIAAQEAASDAGQNLQPNADGEEAAVKRTIDGIMQP
Ga0134110_1011961013300012975Grasslands SoilLAAAKVAAQQAPSAAGPHLQPDAGGEAAAVKRVVDGIMQPYLAQGQRRA
Ga0134087_1006134833300012977Grasslands SoilMHRTATRFGLIVTVAVLAAVKVAAQQAPSAAGPNAGGEAATVKRVVDGIMQPYLAQEQRTVPRGD
Ga0164304_1126730623300012986SoilMHRIATCFGVIVTVTALAVANVVAQQAPSAAGPHLQPDAGDEEAAVKRVVDGIMQPYLAQSQRMAGGHLW
Ga0157374_1156811813300013296Miscanthus RhizosphereMYRTATRFGVIVIVAALGVAKVAAQEAPPSAGQSLQLEEGEEAAVKRVVDGIMQPYLAQGQRMAGGHPWKRSPFL
Ga0157380_1150114523300014326Switchgrass RhizosphereMHRIAACFGVIVTVTALAVANVVAQQAPSAAGPHLQPDAGDEEAAVKRVVDGIMQPYLA
Ga0157379_1167105323300014968Switchgrass RhizosphereMYRTATRFGLIVIVAALGVAKVAAQEAPPSAGQSLQLNEKGEEAAVKRVVDGLMQPYLAQRQRMAGGHPW
Ga0132258_1326488123300015371Arabidopsis RhizosphereMHRIATRFGLILTVGVLVAANVDAQQPPSAASPNLQPNAGSDEAAVKRVVD*
Ga0132255_10014859413300015374Arabidopsis RhizosphereVVVFANRQLSGEEIMHRIATRFGLILTVGVLVAANVDAQQPPSAASPNLQPNAGSDEAAVKRVVD*
Ga0132255_10097558623300015374Arabidopsis RhizosphereMHRIGTCLVLIVTIAVLAAANVVAQEGASSAGQNLEPNAGGEEAAVKRVVDGIMNPYLAQRQ
Ga0182034_1073153623300016371SoilMSHAATRFVLIVTVAVLVAANVDAQQPTSGAGPNLQPNAGSDEAAVKRAVDGIMQPYLAQGQRM
Ga0184619_1044719413300018061Groundwater SedimentMHRIVTRFRLIVIVAVLAAANVAAQEAPSAAGPHLQPNAGGEAVKRVVDGIMQP
Ga0184617_118263113300018066Groundwater SedimentMHSTATRFGVIVTVAALAVAKVAAQQAPSADGPPLQPDAGGEASAVKRV
Ga0184611_130609923300018067Groundwater SedimentMHRITNRFGLIATVAVLAVAKVAAQEAPSTAGQNLQPNTDDEAAAVKRVVDGIMQPYLAEGERMAGGHVWRRSPDLG
Ga0066667_1190383313300018433Grasslands SoilMHRTVTRFGLIVTVAVLAAVKVAAQQAPSVSGPNAGGEVAAVKRVVDGIMQPYLAQQQRT
Ga0137408_144948523300019789Vadose Zone SoilMPRTATRFGLIVTVALLAAANLPAQQAPSAADPPFTANAGGEGAVVKRVVDGIMQPYLAQEQHPTRGRHMEPFS
Ga0193715_102305813300019878SoilMHRIATRFRLIFTVAVWAAAKVAAQEAPSGAGQHLQPNG
Ga0193723_100499753300019879SoilMHRTATRFGLIVTVAVLAAAKVAAQQAPSAAGPHLQPNAGGEAVAVKRIVDGIMQPYLAQGQRNAGGRRWSRSPHLG
Ga0193725_100865333300019883SoilMNRTAIRFSVIVAVAVFSAAKVAAQETPSVAGPNLQPNAGGQEAAVKRVVDGIMQPYLAQSQRMA
Ga0193725_105794213300019883SoilMNRTATRFSLIVTVAVLAAAEVAAQQSPSAAGQNLQPNAGGEEAAVKRIVDGIMQPYLAQGQRNAGH
Ga0193734_105932223300020015SoilMDRAATCFVLIVTVAVLAAANIVAQQAPSDAGPDLQPNASGEAAAVQRIVDGIMQPYLAQ
Ga0193709_104915613300021411SoilMHRTATRFGLIVTVALLAAANLPAQQAPSAADPRLQPNAGGEAAVVKRVVDGIMQPYLSQEQHPTLGRTWSRS
Ga0193695_104049023300021418SoilMHRTATRFGLIVTVALLAAAKVAAQQAPSAASPHLQPNAGGEAAAVKRVVDGIME
Ga0222621_111552313300021510Groundwater SedimentMDRTATCFVLIVTVAVLATNIAAQKAPSAAAPHLQPNASGEEAAVKRIVDGIMQPYL
Ga0126371_1256464723300021560Tropical Forest SoilRFVLIVTVAGLMSVNVVAQEGPCPSGPHLQPDAGSEEAVVKRVVDGIMQPYLAQGQRMAGAKQDERTVS
Ga0247670_108022813300024283SoilMHRIATRLVLIATVVVLAVAKIAAQEEPSAAGQNLQSETGGEEAAVKRVVDSIMQPYLAQRQRVVGGHRWSRSPH
Ga0207684_1148925313300025910Corn, Switchgrass And Miscanthus RhizosphereMHRTAIRFALIVTVALLAAAKLAAQQAPSAAGPRLQPDDGGEAAVVKRVIDGIMQPYLAQGQHTTRGGTWRRSPNL
Ga0207681_1074625313300025923Switchgrass RhizosphereMHRIAVCFGVIVTVTALAVANVVAQQAPSAAGPHLQPDAGDEEAAVKRVVDGIMQPYLAQPQRMAGGHPWKRSPFLG
Ga0207664_1053538923300025929Agricultural SoilMHRTSTRFRLIVTVAVLAAAKVAAQQAPAAAGQNLQPDAGEEAAVKRLVDGIMQPYLAQEQCMA
Ga0207701_1067597123300025930Corn, Switchgrass And Miscanthus RhizosphereMHPIARRFRLIVTLTLFAGAQLTTQEAASDAGQTLQSDAGGEEATVKRVVDSIMQPYLAQGQRAA
Ga0207686_1071899923300025934Miscanthus RhizosphereMHRITTCFGVIVTVTAFAVANVVAQQAPSAAGPHLQPDGGDEEAAVKRLVDGIMQPYLA
Ga0207678_1167794013300026067Corn RhizosphereMHRIAARFTLVVTAAVLTAANVIAQQSSPSGSDLQSNAVGEEAAVKRVVDGIMQPYLAQRQR
Ga0207702_1230358613300026078Corn RhizosphereMHRIATRVGLILTVALLAAAKVDAQQAPSAASPRLQPDDGGEAAVVKRVVD
Ga0207674_1150998913300026116Corn RhizosphereMYRIATCLVLIVTIAVLAAANVVAQEGTSPAGQNLEPNAGGEEAAVKRVVDGIMNPYLAQRQRTAG
Ga0209470_138255123300026324SoilMHRTATRFGLVVTVALLAAATVAAQQAPSAAGPHLQPDAGGEAAAVKRVVDGIMQPYLAQGQRRAR
Ga0209378_124810213300026528SoilMHRTATRFGLVVTVALLAAATVAAQQAPSAAGPHLQPDAGGEAAAVKRVVDGIMQPYLAQGQRRARGHLWRRSPY
Ga0209388_112677113300027655Vadose Zone SoilMHRTATRFGLIVAVAVLAATKVAAQQAPSGAGPHLQPNAGGEVAAVKRVVDGIM
Ga0137415_1051794723300028536Vadose Zone SoilMHRIATCFGVIVTVTALAVAKVAAQEAPSGAGQNLQPNPGDEETIVKR
Ga0307280_1036161813300028768SoilMHRTATRFGLIVTVALLAAAKVAAQQAPSATGPHLQPNAGGEAAAVKRIVDGIMQPYLAQGQRNAGGRR
Ga0307305_1009584413300028807SoilMHRTATRFGLIVTVALLAAAKVAAQQAPSAASPHLQPNAGGEAAAVKRVVDGIMEPYLAQEQRTLPRGPTWR
Ga0307305_1050766813300028807SoilMHRIATRFRLIVTVAVLAAAKVAAQEAPSAAGPHLQPNAGDEAAAVKR
Ga0307296_1027026923300028819SoilMHRIATRFRLIFTVAVWAAAKVAAQEAPSGAGQHLQPNAGGEE
Ga0307312_1096003623300028828SoilMDRTATRFCLIVIVAVLATANIVAQQAPSASGPDLQPNSKTEEAGVKRVVDGIMQPYLAQEQ
Ga0307304_1028956113300028885SoilMHRTATRFGLIVTVALLAAAKVAAQQAPSATGADLQPNADGEAAAVKRVVDGIMQPYLAQGQR
Ga0075373_1158233813300030945SoilMHRTSTRFRLIVTVAVLAAAKVAAQQAPDAGGEEAAVKRLVDGIMQPYL
Ga0170822_1177197123300031122Forest SoilMHRIATCFGVIVTVTALAVANVVAQQAPSAAGPHLRPDAGDGEAAVKRVVEGIMQ
Ga0170820_1546101923300031446Forest SoilMHRTATRFGLIVIVAVLAAAKIAAQEAASDAGQNLQPNADGEEAAVKRTIDGIMQPYLAQ
Ga0170820_1729969723300031446Forest SoilMHRIATCFGVIVTVTALAVANVVAQQAPSAAGPHLQPDAGDEEAAVKRVVDGIMQPYLAQ
Ga0306917_1019276523300031719SoilMHRIATRFGLILIVAVLVAANVDAQQPPSAAGPNLPPNAGSDEAAVKRVVDGIMQPYLAQGQ
Ga0306918_1144588113300031744SoilMHCIATRLVLIVTIALLAAAIIVAQQAPSSADDLPPDAGGEEAAVKRVVDGIMQ
Ga0310916_1151301223300031942SoilMHCIATRLVLIVTIALLAAAIIVAQQAPSSADDLPPDAGGEEAAVKRVVDGIMQPYLAQ
Ga0306922_1077765013300032001SoilMHRIATRFGLILIVAVLVAANVDAQQPPSAAGPNLPPNAASDEAAVKRVVDGIMQPY
Ga0310902_1067472723300032012SoilMHRIATCLVLIVTIAVLAAANVVAQEGTSSAGQNLEPNAGGEEAAVKRVVDGIMNPYLAQRQRT
Ga0310902_1122655613300032012SoilMHRIATRFRLIVTVTILAAAKVAAQEAPSAAGQNLQPAAGGEEAAVKRVVDGIMQPYLAE
Ga0310896_1079854923300032211SoilMHRIATRFRLIVTVTILAAAKVAAQEAPSAAGQNLPPDAGGEEAAVK
Ga0310914_1077248113300033289SoilMHRIATRFGLILIVAVLVAANVDAQQPPSAAGPNLQPNAGSDEAAVKRVVDGIMQPY
Ga0247830_1083310723300033551SoilMHRIATRFRLIVTVTILAAAKVAAQEAPSAAGQNLQPDADGEEAAVKRVVDGIMQPYLAQGQR

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Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
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