NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome / Metatranscriptome Family F075155

Metagenome / Metatranscriptome Family F075155

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F075155
Family Type Metagenome / Metatranscriptome
Number of Sequences 119
Average Sequence Length 45 residues
Representative Sequence MDDLIGRLVAPVGVDRTAAEKAVGIIPQSARSSARSPASASSS
Number of Associated Samples 103
Number of Associated Scaffolds 119

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 61.34 %
% of genes near scaffold ends (potentially truncated) 68.91 %
% of genes from short scaffolds (< 2000 bps) 78.99 %
Associated GOLD sequencing projects 98
AlphaFold2 3D model prediction Yes
3D model pTM-score0.20

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Bacteria (78.992 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil
(21.008 % of family members)
Environment Ontology (ENVO) Unclassified
(26.891 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(52.101 % of family members)


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Multiple Sequence Alignments

Select alignment to view:      

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Fibrous Signal Peptide: No Secondary Structure distribution: α-helix: 26.76%    β-sheet: 0.00%    Coil/Unstructured: 73.24%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.20
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 119 Family Scaffolds
PF14229DUF4332 40.34
PF05872HerA_C 25.21
PF00809Pterin_bind 10.08
PF01546Peptidase_M20 6.72
PF01288HPPK 3.36
PF02152FolB 2.52
PF07687M20_dimer 1.68
PF09939DUF2171 0.84
PF01642MM_CoA_mutase 0.84
PF03992ABM 0.84

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 119 Family Scaffolds
COG0433Archaeal DNA helicase HerA or a related bacterial ATPase, contains HAS-barrel and ATPase domainsReplication, recombination and repair [L] 25.21
COG08017,8-dihydro-6-hydroxymethylpterin pyrophosphokinase (folate biosynthesis)Coenzyme transport and metabolism [H] 3.36
COG1539Dihydroneopterin aldolaseCoenzyme transport and metabolism [H] 2.52
COG1884Methylmalonyl-CoA mutase, N-terminal domain/subunitLipid transport and metabolism [I] 0.84

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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms78.99 %
UnclassifiedrootN/A21.01 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
2124908045|KansclcFeb2_ConsensusfromContig1194177All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria905Open in IMG/M
3300000580|AF_2010_repII_A01DRAFT_1033772All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales799Open in IMG/M
3300000597|AF_2010_repII_A1DRAFT_10003481All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae4272Open in IMG/M
3300000651|AP72_2010_repI_A10DRAFT_1016199All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales956Open in IMG/M
3300000655|AF_2010_repII_A100DRAFT_1012862All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae1593Open in IMG/M
3300000793|AF_2010_repII_A001DRAFT_10028048All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae1329Open in IMG/M
3300002911|JGI25390J43892_10156047Not Available533Open in IMG/M
3300004633|Ga0066395_10920708All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales530Open in IMG/M
3300005166|Ga0066674_10078149All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales1520Open in IMG/M
3300005180|Ga0066685_10733637All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales675Open in IMG/M
3300005187|Ga0066675_10867716All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales682Open in IMG/M
3300005363|Ga0008090_10131596All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1675Open in IMG/M
3300005467|Ga0070706_100137330All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria2282Open in IMG/M
3300005471|Ga0070698_101141077Not Available728Open in IMG/M
3300005552|Ga0066701_10009441All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → Rhodovulum → unclassified Rhodovulum → Rhodovulum sp. PH104365Open in IMG/M
3300005559|Ga0066700_10034171All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → Rhodovulum → unclassified Rhodovulum → Rhodovulum sp. PH103004Open in IMG/M
3300005713|Ga0066905_100271941All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae1314Open in IMG/M
3300005713|Ga0066905_100610382All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria925Open in IMG/M
3300005713|Ga0066905_100622296All Organisms → cellular organisms → Bacteria → Proteobacteria917Open in IMG/M
3300005713|Ga0066905_100855956All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales792Open in IMG/M
3300005713|Ga0066905_101533316All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales608Open in IMG/M
3300005764|Ga0066903_106209197All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales624Open in IMG/M
3300005764|Ga0066903_108555462Not Available521Open in IMG/M
3300005983|Ga0081540_1001623All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales19162Open in IMG/M
3300006028|Ga0070717_10263009All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales1527Open in IMG/M
3300006034|Ga0066656_10503145All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → Rhodovulum → unclassified Rhodovulum → Rhodovulum sp.790Open in IMG/M
3300006038|Ga0075365_10584102All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → Rhodovulum → unclassified Rhodovulum → Rhodovulum sp.790Open in IMG/M
3300006175|Ga0070712_101635712Not Available563Open in IMG/M
3300006791|Ga0066653_10055371All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1667Open in IMG/M
3300006800|Ga0066660_11038275All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales655Open in IMG/M
3300006845|Ga0075421_100104880All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium3555Open in IMG/M
3300006854|Ga0075425_102431530All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales581Open in IMG/M
3300006904|Ga0075424_100113668All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae2860Open in IMG/M
3300007265|Ga0099794_10622802All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales572Open in IMG/M
3300007788|Ga0099795_10519400Not Available557Open in IMG/M
3300009038|Ga0099829_10026721All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales4057Open in IMG/M
3300009090|Ga0099827_11860843Not Available525Open in IMG/M
3300009098|Ga0105245_12344587All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales587Open in IMG/M
3300009156|Ga0111538_11298452All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → Rhodovulum → unclassified Rhodovulum → Rhodovulum sp.919Open in IMG/M
3300009162|Ga0075423_10136216All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales2578Open in IMG/M
3300009792|Ga0126374_10779623Not Available728Open in IMG/M
3300010046|Ga0126384_10668943All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria917Open in IMG/M
3300010046|Ga0126384_11059565Not Available741Open in IMG/M
3300010047|Ga0126382_10320811Not Available1173Open in IMG/M
3300010047|Ga0126382_12272288All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales524Open in IMG/M
3300010304|Ga0134088_10651725Not Available526Open in IMG/M
3300010325|Ga0134064_10179905All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales748Open in IMG/M
3300010335|Ga0134063_10216502All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales905Open in IMG/M
3300010358|Ga0126370_12389079All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales525Open in IMG/M
3300010361|Ga0126378_10037765Not Available4393Open in IMG/M
3300010361|Ga0126378_11451118All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales777Open in IMG/M
3300010366|Ga0126379_11771336All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales722Open in IMG/M
3300010376|Ga0126381_103434815All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales623Open in IMG/M
3300012202|Ga0137363_10737628Not Available834Open in IMG/M
3300012202|Ga0137363_11740112All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales516Open in IMG/M
3300012207|Ga0137381_10064923All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales3043Open in IMG/M
3300012209|Ga0137379_10036289All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC68604755Open in IMG/M
3300012210|Ga0137378_10064558All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales3315Open in IMG/M
3300012211|Ga0137377_10868691All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales834Open in IMG/M
3300012212|Ga0150985_104606597All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales566Open in IMG/M
3300012351|Ga0137386_10651211All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales758Open in IMG/M
3300012355|Ga0137369_10487882All Organisms → cellular organisms → Bacteria → Proteobacteria873Open in IMG/M
3300012359|Ga0137385_11201151All Organisms → cellular organisms → Bacteria → Proteobacteria620Open in IMG/M
3300012361|Ga0137360_10895604All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales765Open in IMG/M
3300012948|Ga0126375_10154934All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales1449Open in IMG/M
3300012948|Ga0126375_10296973All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales1120Open in IMG/M
3300012960|Ga0164301_10117511All Organisms → cellular organisms → Bacteria → Proteobacteria1564Open in IMG/M
3300012971|Ga0126369_10131264All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes2325Open in IMG/M
3300012971|Ga0126369_10415537All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Rhizobium → Rhizobium freirei → Rhizobium freirei PRF 811386Open in IMG/M
3300012971|Ga0126369_12071954Not Available657Open in IMG/M
3300012986|Ga0164304_10224200All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1243Open in IMG/M
3300015371|Ga0132258_10210082All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC68604728Open in IMG/M
3300015372|Ga0132256_101785835All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales723Open in IMG/M
3300016294|Ga0182041_11428444Not Available636Open in IMG/M
3300016404|Ga0182037_11466529All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales604Open in IMG/M
3300016422|Ga0182039_11457696Not Available623Open in IMG/M
3300018433|Ga0066667_10208468All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1444Open in IMG/M
3300018468|Ga0066662_10246233All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales1457Open in IMG/M
3300018482|Ga0066669_10050885All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC68602615Open in IMG/M
3300021168|Ga0210406_10894637Not Available668Open in IMG/M
3300021403|Ga0210397_11637060Not Available500Open in IMG/M
3300021560|Ga0126371_10287828All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales1767Open in IMG/M
3300025910|Ga0207684_10646168All Organisms → cellular organisms → Bacteria → Proteobacteria902Open in IMG/M
3300026118|Ga0207675_102236331All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria561Open in IMG/M
3300026297|Ga0209237_1113929All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → unclassified Bradyrhizobiaceae → Bradyrhizobiaceae bacterium1155Open in IMG/M
3300026538|Ga0209056_10042106All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales4177Open in IMG/M
3300026547|Ga0209156_10479232All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales514Open in IMG/M
3300026552|Ga0209577_10105562All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria2276Open in IMG/M
3300026555|Ga0179593_1014611All Organisms → cellular organisms → Bacteria1848Open in IMG/M
3300027105|Ga0207944_1022983All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales538Open in IMG/M
3300027882|Ga0209590_10899636Not Available557Open in IMG/M
3300028878|Ga0307278_10006623All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria5504Open in IMG/M
3300031093|Ga0308197_10314570All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales582Open in IMG/M
3300031546|Ga0318538_10041343Not Available2214Open in IMG/M
3300031546|Ga0318538_10783556All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales517Open in IMG/M
3300031561|Ga0318528_10069468All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1811Open in IMG/M
3300031561|Ga0318528_10148027All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1249Open in IMG/M
3300031561|Ga0318528_10787498Not Available508Open in IMG/M
3300031640|Ga0318555_10169527All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → unclassified Beijerinckiaceae → Beijerinckiaceae bacterium1172Open in IMG/M
3300031682|Ga0318560_10298135All Organisms → cellular organisms → Bacteria → Proteobacteria868Open in IMG/M
3300031713|Ga0318496_10697501All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales560Open in IMG/M
3300031719|Ga0306917_10149938Not Available1728Open in IMG/M
3300031724|Ga0318500_10000247All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales10933Open in IMG/M
3300031736|Ga0318501_10022619All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales2673Open in IMG/M
3300031769|Ga0318526_10009917All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales3041Open in IMG/M
3300031770|Ga0318521_10057165Not Available2036Open in IMG/M
3300031805|Ga0318497_10081493All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1714Open in IMG/M
3300031845|Ga0318511_10118467All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → unclassified Bradyrhizobiaceae → Bradyrhizobiaceae bacterium1138Open in IMG/M
3300031880|Ga0318544_10127947All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria967Open in IMG/M
3300031890|Ga0306925_10565179All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1204Open in IMG/M
3300031893|Ga0318536_10047465Not Available2065Open in IMG/M
3300031947|Ga0310909_10534847All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria981Open in IMG/M
3300031981|Ga0318531_10098498All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → unclassified Beijerinckiaceae → Beijerinckiaceae bacterium1286Open in IMG/M
3300032010|Ga0318569_10073932All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1511Open in IMG/M
3300032010|Ga0318569_10420063Not Available624Open in IMG/M
3300032051|Ga0318532_10299045All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales571Open in IMG/M
3300032052|Ga0318506_10399504Not Available609Open in IMG/M
3300032076|Ga0306924_11399037All Organisms → cellular organisms → Bacteria → Proteobacteria746Open in IMG/M
3300032090|Ga0318518_10578635All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales573Open in IMG/M


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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil21.01%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil13.45%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil13.45%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil10.08%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil6.72%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil5.04%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil4.20%
Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil4.20%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere4.20%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere4.20%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil3.36%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil2.52%
Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil0.84%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere0.84%
Avena Fatua RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere0.84%
Tabebuia Heterophylla RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere0.84%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere0.84%
Populus EndosphereHost-Associated → Plants → Roots → Bulk Soil → Unclassified → Populus Endosphere0.84%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere0.84%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere0.84%
Tropical Rainforest SoilEnvironmental → Terrestrial → Soil → Unclassified → Tropical Rainforest → Tropical Rainforest Soil0.84%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
2124908045Soil microbial communities from Great Prairies - Kansas assembly 1 01_01_2011EnvironmentalOpen in IMG/M
3300000580Forest soil microbial communities from Amazon forest - 2010 replicate II A01EnvironmentalOpen in IMG/M
3300000597Forest soil microbial communities from Amazon forest - 2010 replicate II A1EnvironmentalOpen in IMG/M
3300000651Forest soil microbial communities from Amazon forest - Pasture72 2010 replicate I A10EnvironmentalOpen in IMG/M
3300000655Forest soil microbial communities from Amazon forest - 2010 replicate II A100EnvironmentalOpen in IMG/M
3300000793Forest soil microbial communities from Amazon forest - 2010 replicate II A001EnvironmentalOpen in IMG/M
3300002911Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_2_20cmEnvironmentalOpen in IMG/M
3300004633Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBioEnvironmentalOpen in IMG/M
3300005166Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_123EnvironmentalOpen in IMG/M
3300005180Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134EnvironmentalOpen in IMG/M
3300005187Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124EnvironmentalOpen in IMG/M
3300005363Tropical rainforest soil microbial communities from the Amazon Forest, Brazil, analyzing deforestation - Metatranscriptome F II A100 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300005467Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaGEnvironmentalOpen in IMG/M
3300005471Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaGEnvironmentalOpen in IMG/M
3300005552Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150EnvironmentalOpen in IMG/M
3300005559Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149EnvironmentalOpen in IMG/M
3300005713Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)EnvironmentalOpen in IMG/M
3300005764Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)EnvironmentalOpen in IMG/M
3300005983Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1Host-AssociatedOpen in IMG/M
3300006028Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaGEnvironmentalOpen in IMG/M
3300006034Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_105EnvironmentalOpen in IMG/M
3300006038Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5Host-AssociatedOpen in IMG/M
3300006175Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaGEnvironmentalOpen in IMG/M
3300006791Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_102EnvironmentalOpen in IMG/M
3300006800Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109EnvironmentalOpen in IMG/M
3300006845Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5Host-AssociatedOpen in IMG/M
3300006854Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4Host-AssociatedOpen in IMG/M
3300006904Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3Host-AssociatedOpen in IMG/M
3300007265Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1EnvironmentalOpen in IMG/M
3300007788Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2EnvironmentalOpen in IMG/M
3300009038Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaGEnvironmentalOpen in IMG/M
3300009090Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaGEnvironmentalOpen in IMG/M
3300009098Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaGHost-AssociatedOpen in IMG/M
3300009156Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)Host-AssociatedOpen in IMG/M
3300009162Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2Host-AssociatedOpen in IMG/M
3300009792Tropical forest soil microbial communities from Panama - MetaG Plot_12EnvironmentalOpen in IMG/M
3300010046Tropical forest soil microbial communities from Panama - MetaG Plot_36EnvironmentalOpen in IMG/M
3300010047Tropical forest soil microbial communities from Panama - MetaG Plot_30EnvironmentalOpen in IMG/M
3300010304Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09182015EnvironmentalOpen in IMG/M
3300010325Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_2_0_1 metaGEnvironmentalOpen in IMG/M
3300010335Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09082015EnvironmentalOpen in IMG/M
3300010358Tropical forest soil microbial communities from Panama - MetaG Plot_3EnvironmentalOpen in IMG/M
3300010361Tropical forest soil microbial communities from Panama - MetaG Plot_23EnvironmentalOpen in IMG/M
3300010366Tropical forest soil microbial communities from Panama - MetaG Plot_24EnvironmentalOpen in IMG/M
3300010376Tropical forest soil microbial communities from Panama - MetaG Plot_28EnvironmentalOpen in IMG/M
3300012202Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaGEnvironmentalOpen in IMG/M
3300012207Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaGEnvironmentalOpen in IMG/M
3300012209Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaGEnvironmentalOpen in IMG/M
3300012210Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaGEnvironmentalOpen in IMG/M
3300012211Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaGEnvironmentalOpen in IMG/M
3300012212Combined assembly of Hopland grassland soilHost-AssociatedOpen in IMG/M
3300012351Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_100_16 metaGEnvironmentalOpen in IMG/M
3300012355Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_113_16 metaGEnvironmentalOpen in IMG/M
3300012359Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaGEnvironmentalOpen in IMG/M
3300012361Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaGEnvironmentalOpen in IMG/M
3300012948Tropical forest soil microbial communities from Panama - MetaG Plot_14EnvironmentalOpen in IMG/M
3300012960Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MGEnvironmentalOpen in IMG/M
3300012971Tropical forest soil microbial communities from Panama - MetaG Plot_1EnvironmentalOpen in IMG/M
3300012986Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MGEnvironmentalOpen in IMG/M
3300015371Combined assembly of cpr5 and col0 rhizosphere and soilHost-AssociatedOpen in IMG/M
3300015372Soil combined assemblyHost-AssociatedOpen in IMG/M
3300016294Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178EnvironmentalOpen in IMG/M
3300016404Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082EnvironmentalOpen in IMG/M
3300016422Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111EnvironmentalOpen in IMG/M
3300018433Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116EnvironmentalOpen in IMG/M
3300018468Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111EnvironmentalOpen in IMG/M
3300018482Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118EnvironmentalOpen in IMG/M
3300021168Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-MEnvironmentalOpen in IMG/M
3300021403Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-OEnvironmentalOpen in IMG/M
3300021560Tropical forest soil microbial communities from Panama - MetaG Plot_4EnvironmentalOpen in IMG/M
3300025910Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300026118Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026297Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_1_40cm (SPAdes)EnvironmentalOpen in IMG/M
3300026538Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114 (SPAdes)EnvironmentalOpen in IMG/M
3300026547Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124 (SPAdes)EnvironmentalOpen in IMG/M
3300026552Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109 (SPAdes)EnvironmentalOpen in IMG/M
3300026555Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal (PacBio error correction)EnvironmentalOpen in IMG/M
3300027105Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF018 (SPAdes)EnvironmentalOpen in IMG/M
3300027882Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300028878Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_117EnvironmentalOpen in IMG/M
3300031093Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_198 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300031546Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f23EnvironmentalOpen in IMG/M
3300031561Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f26EnvironmentalOpen in IMG/M
3300031640Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f23EnvironmentalOpen in IMG/M
3300031682Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f22EnvironmentalOpen in IMG/M
3300031713Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f22EnvironmentalOpen in IMG/M
3300031719Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)EnvironmentalOpen in IMG/M
3300031724Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f20EnvironmentalOpen in IMG/M
3300031736Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f21EnvironmentalOpen in IMG/M
3300031769Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f24EnvironmentalOpen in IMG/M
3300031770Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f17EnvironmentalOpen in IMG/M
3300031805Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f23EnvironmentalOpen in IMG/M
3300031845Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f18EnvironmentalOpen in IMG/M
3300031880Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f25EnvironmentalOpen in IMG/M
3300031890Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)EnvironmentalOpen in IMG/M
3300031893Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f28EnvironmentalOpen in IMG/M
3300031947Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000HEnvironmentalOpen in IMG/M
3300031981Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f25EnvironmentalOpen in IMG/M
3300032010Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f22EnvironmentalOpen in IMG/M
3300032051Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f26EnvironmentalOpen in IMG/M
3300032052Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f19EnvironmentalOpen in IMG/M
3300032076Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)EnvironmentalOpen in IMG/M
3300032090Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f22EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
KansclcFeb2_010695402124908045SoilMDDLIGRLGVVTGVDRTAADRAVGIIPQSARSWAQSPALASSSDL
AF_2010_repII_A01DRAFT_103377223300000580Forest SoilMDDLIGRIGAAIGADRTAAEKAGGDIPQSARSWPQSSVLASSSDL*
AF_2010_repII_A1DRAFT_1000348123300000597Forest SoilMDGLIGRLDAVVGVDRTAAEKAVGTIPQSARSSARFSILASSSDV*
AP72_2010_repI_A10DRAFT_101619913300000651Forest SoilMDDLIGRLVATVGVDRTAAEKAVGIIPQSARSSAR
AF_2010_repII_A100DRAFT_101286213300000655Forest SoilMDDLIGRLVAPVGVDRTAADKFVGIIPQSARSSARSP
AF_2010_repII_A001DRAFT_1002804813300000793Forest SoilLIGRLDAVVGVDRTAAEKAVGTIPQSARSSARFSILASSSDV*
JGI25390J43892_1015604723300002911Grasslands SoilMDDLIGRRGAVVGADRTAADKAVGIIPQSARSWAQSPALASS
Ga0066395_1092070823300004633Tropical Forest SoilAESAGLVRGYMDDLIGRIGAAIGADRTAAEKAGGDIPQSARSWPRSSVLASSSDL*
Ga0066674_1007814923300005166SoilMDDLIGGLGTAYGADRTAEKVIGIIPQSARSWARSPALANSSNV*
Ga0066685_1073363723300005180SoilMDDFIGRIGAAIGADRTAAEKAGGDIPQSARSWPRSSVLASSSDL*
Ga0066675_1086771623300005187SoilLVRGYMDDFIGRIGAAIGADRTAAEKAGGDIPQSARSWPRSSVLASSSDL*
Ga0008090_1013159623300005363Tropical Rainforest SoilMDDLIGRIGAAIGADRTAAEKAGGDIPQSARSWPRSSVLASSSDL*
Ga0070706_10013733023300005467Corn, Switchgrass And Miscanthus RhizosphereMDDLIGRLVATVGVDRTAAEKAVGIIPQSARSSARSPASASSFHI*
Ga0070698_10114107723300005471Corn, Switchgrass And Miscanthus RhizosphereMDDLIGRRVANSGDRTAAEGAVGIIPQSLRREERSLEVHSV
Ga0066701_1000944113300005552SoilRPAESAGLVRGYMDDLIGGLGTVYGADRTAEKVVGIIPQSARSWARSPALANSSNV*
Ga0066700_1003417143300005559SoilMDDLIGGLGTVYGADRTAEKVVGIIPQSARSWARSPALANSSNV*
Ga0066905_10027194123300005713Tropical Forest SoilMDDPIGRIGAEIGVDRTAAEKAVGIIPQSARSWARSSVLASSSDAS*
Ga0066905_10061038223300005713Tropical Forest SoilMDDLIGRLGAGRGADRTAAEKAVGIIPQSARSWARFPALASSSSV*
Ga0066905_10062229633300005713Tropical Forest SoilPAESAGLVRGYMDDLIGRLGVIIGVDRTAAEKAGGIIPQSARSWTRFPALASSSDV*
Ga0066905_10085595613300005713Tropical Forest SoilMDDLIGRLVAPVGVDRTAAEKAVGIIPQSARSSARSPA
Ga0066905_10153331623300005713Tropical Forest SoilSAGLVRGYMDDFAGCLGVINDADRAVADKTGGVIPQSARSPSPALASPSDV*
Ga0066903_10620919723300005764Tropical Forest SoilGQPAESAGLVRGYMDGLIGRLDAVVGVDRTVAEKAVGTIPQSARSWGRSPVLVSSSDV*
Ga0066903_10855546223300005764Tropical Forest SoilMDDLIGRLGAGRGADRTAAEKAVGIIPQSARLWARFPALASCSSV*
Ga0081540_100162353300005983Tabebuia Heterophylla RhizosphereMDDLIGRLGAAIGVDRTAAEKAVGIIPQSARSWGRSSVLASSSDD*
Ga0070717_1026300923300006028Corn, Switchgrass And Miscanthus RhizosphereMDDLIGRLGAGSGADRTAAEKAVAIIPQSARSWARFPALASSPNI*
Ga0066656_1050314513300006034SoilAESAGLVRGYMDDFIGRIGAAIGADRTAAEKAGGDIPQSARSWPRSSVLASSSDL*
Ga0075365_1058410213300006038Populus EndosphereGYMDDLIGRIGASIGADRTAAEKAGGDIPQSARSWARSSVLASSSDL*
Ga0070712_10163571213300006175Corn, Switchgrass And Miscanthus RhizosphereMDDLIGRIGAAIGVDRTAAEKAVGIIPQSARSWARCSVLA
Ga0066653_1005537123300006791SoilMDDLIGRRGTVVGADRTAADKAVGIIPQSARSWAQSPALASSSDV*
Ga0066660_1103827513300006800SoilTGATIGVDRTAAEKAVGIIPQSARSWARCSVLACSSDV*
Ga0075421_10010488013300006845Populus RhizosphereMDDLIGRLGVVIGVERTAADRAVGIIPQSARSWAQSPALASSSDL*
Ga0075425_10243153023300006854Populus RhizosphereSAGLVRGYMDDLIGRLGAVIGADRAVAEKAVDSIPQSAGSWARSPVLASSSDV*
Ga0075424_10011366813300006904Populus RhizosphereMDDLIGRIGATIGVDRTAAEKAVGIIPQSARSWARCSVLA
Ga0099794_1062280213300007265Vadose Zone SoilGLVRGYMDDLIGRLGAGSGADRTAAEKAVAIIPQSARSWARFPALASSPNI*
Ga0099795_1051940013300007788Vadose Zone SoilMDDLIGRLVAPVGVDRTAAEKAVGIIPQWARSSARSPAS
Ga0099829_1002672133300009038Vadose Zone SoilMDDLIGRLVAPVGVDRTAAEKAVGIIPQSARSSARSPVSASSSHV*
Ga0099827_1186084313300009090Vadose Zone SoilMDDLIGRLVANSGDRTAAERAVGIIPQSLRREEPSPMPCA
Ga0105245_1234458713300009098Miscanthus RhizosphereSAGLVRGYMDDLIGRIGAAIGVDRTAAEKAVGIIPQSARSWARCSVLACSSDV*
Ga0111538_1129845213300009156Populus RhizosphereIGADRTAAEKAGGDIPQSARSWARSSVLASSSDL*
Ga0075423_1013621613300009162Populus RhizosphereMDDLIGRVGASIGADRTAAEKAGGDIPQSARSWARSSVLASSSDL*
Ga0126374_1077962313300009792Tropical Forest SoilMDDLIGRLVAPVGVDRTAAEKAVGIIPQSARSSARSP
Ga0126384_1066894333300010046Tropical Forest SoilGAGERNMDDLIGRLVATVGVDRTAAKKAVGIIPQSARSSARSPASASSSHI*
Ga0126384_1105956523300010046Tropical Forest SoilMDDLIGRIGAAIGADRTAAEKAAGDIPQSARSWPRSSVLASSSDL*
Ga0126382_1032081123300010047Tropical Forest SoilMDDLIGRLGAGSGADRTAAEKAVGIIPQSARSWARFPALASSSSV*
Ga0126382_1227228813300010047Tropical Forest SoilLVATVGVDRTAAEKAVGIIPQSARSSARSPASASSFHI*
Ga0134088_1065172523300010304Grasslands SoilMDDLIGRLVAPVGVDRTAAAKAVVIIPQSARSSARSP
Ga0134064_1017990533300010325Grasslands SoilAESAGLVRGYMDDLIGGLGTVYGADRTAEKVVGIIPQSARSWARAPALANSSNV*
Ga0134063_1021650233300010335Grasslands SoilMDDLIGRRGAVVGADRTAADKAVGIIPQSARSWAQSPALASSSDV*
Ga0126370_1238907923300010358Tropical Forest SoilERHMDDLIGRLVAPVGVDRTAAEKAVGIIPQSTRWSARSPASASSSHV*
Ga0126378_1003776553300010361Tropical Forest SoilMDGLIGRLDAVVGVDRTVSEKAVGTIPQSARSWGRSPVLVSSSDV*
Ga0126378_1145111813300010361Tropical Forest SoilMDGLIGRLDAVVGVDRTAAEKAVGTIPQSARSSARFSILARSSDV*
Ga0126379_1177133613300010366Tropical Forest SoilYGQPAESAGLVRGYMDGLIGRLDAVVGVDRTAAEKAVGTIPQSARSSARFSILASSSDV*
Ga0126381_10343481513300010376Tropical Forest SoilTCRERGAGERHMDDLIGRLVAPVGVDRTAAAKAVVIIPQSARSSARSPASASSSHV*
Ga0137363_1073762823300012202Vadose Zone SoilMDDLIGRLVATLGVDRTAAEKAVGIIPQSARSSARSPASASSFHI*
Ga0137363_1174011223300012202Vadose Zone SoilSTCRERGAGERHMDDLIGRLVAPVGVDRTAAEKAVGIIPQSARSSARSPVSASSSHV*
Ga0137381_1006492343300012207Vadose Zone SoilMDDLIGRLVATVGVDRTAAEKAVGIIPQSARSSARSPASASSSHI*
Ga0137379_1003628943300012209Vadose Zone SoilMDDLIGGLGTVYGADRTAEKVVGIIPQSASSWARSPALANSSNV*
Ga0137378_1006455833300012210Vadose Zone SoilMDDLIGRLVAPVGVDRTAAEKAVGIIPQSARSSARSPASASSS
Ga0137377_1086869133300012211Vadose Zone SoilYCQPAESAGLVRGYMDDLIGRVGATIGVDRTAAEKAVGTVPQSARSWARSSVLASSSDV*
Ga0150985_10460659713300012212Avena Fatua RhizosphereLVRGYMDDLIGRVGATIGVDRTAAEKAVGTVPQSARSWARCSVLACSSDV*
Ga0137386_1065121113300012351Vadose Zone SoilRLIGRLVATVGVDRTAAEKAVGIIPQSARSSARSPASASSSHI*
Ga0137369_1048788213300012355Vadose Zone SoilMDDLIGRLVATVGVDRTAAEKAVGIIPQSARSSARSPASASS
Ga0137385_1120115123300012359Vadose Zone SoilMDDLIGRRGTVVGADRTAADKAVGIIPQSARSWAQSPAL
Ga0137360_1089560413300012361Vadose Zone SoilSTCRERGAGERHMDDLIGRLVAPVGVDRTAAEKAVGIIPQWARSSARSPASASSSHV*
Ga0126375_1015493423300012948Tropical Forest SoilMDGLIGRLDAVVGVDRTVAEKAVGTIPQSARSSARFSILASSSDV*
Ga0126375_1029697323300012948Tropical Forest SoilMDDLIGRIGAAIGADRTAAEKAGGDIQQSARSWARSSVLASSSDL*
Ga0164301_1011751113300012960SoilMDDLIGRTGAMIGVDRTAAEKAVGIIPQSARSWARC
Ga0126369_1013126423300012971Tropical Forest SoilMDDLIGRIGAAIGADRTAAEKAAGDIPQSARSWPRSSVLASSSDR*
Ga0126369_1041553713300012971Tropical Forest SoilMDGLIGRLDAVVGVDRTAAEKAVGTIPQSARSSARFSILA
Ga0126369_1207195413300012971Tropical Forest SoilMDDLIGRLVAPVGVDRTAVEKAVGIIPQSARSSARSPASASS
Ga0164304_1022420033300012986SoilAESAGLVRGYMDDLIGRIGAATGVDRTAAEKAVGIIPQSARSWARCSVLASSSDV*
Ga0132258_1021008273300015371Arabidopsis RhizosphereMDDLIGRIGASIGADRTAAEKAGGDIPQSARSWARSSVLASSSDL*
Ga0132256_10178583513300015372Arabidopsis RhizosphereRHMDDLIGRLVAPVGVDRTAAEKAVGIIPQWARSSARSPASASSSHF*
Ga0182041_1142844413300016294SoilMDDLIGRLVAPVGVDRTAAEKAVGIIPQSTRSSARSPASAS
Ga0182037_1146652913300016404SoilGRLVATVGVDRTAAEKAVGIIPQSARSSARSPASASSFHI
Ga0182039_1145769613300016422SoilMDDLIGCLVAPVGVDRTAAEKAVGIIPQSARSSARSPVSASSSH
Ga0066667_1020846813300018433Grasslands SoilMDDFIGRIGAAIGADRTAAEKAGGDIPQSARSWPRSSVLASSSDL
Ga0066662_1024623323300018468Grasslands SoilMDDLIGRRGAVVGADRTAADKAVGIIPQSARSWAQSPALASSSDV
Ga0066669_1005088513300018482Grasslands SoilAIGADRTAAEKAGGDIPQSARSWPRSSVLASSSDL
Ga0210406_1089463723300021168SoilMDDLIGRLGAGSGADRTAAEKAVAIIPQSARSWARFPALASSPNI
Ga0210397_1163706023300021403SoilMDDLIGRLVAPVGVDRTAAAKAVVIIPQSARSSARSPASAS
Ga0126371_1028782823300021560Tropical Forest SoilMDDLIGRIGAAIGADRTAAEKAGGDIPQSARSWPRSSVLASSSDL
Ga0207684_1064616823300025910Corn, Switchgrass And Miscanthus RhizosphereMDDLIGRLVAPVGVDRTAAEEAVGIIPQSARSSARSP
Ga0207675_10223633113300026118Switchgrass RhizosphereMDDLIGRIGAAIGVDRTAAEKAVGIIPQSARSWARC
Ga0209237_111392923300026297Grasslands SoilMDDLIGRLVATVGVDRTAAEKAVGIIPQSARSSARSPAS
Ga0209056_1004210633300026538SoilMDDLIGGLGTVYGADRTAEKVVGIIPQSARSWARSPALANSSNV
Ga0209156_1047923213300026547SoilIGRIGAAIGADRTAAEKAGGDIPQSARSWPRSSVLASSSDL
Ga0209577_1010556213300026552SoilRGYMDDLIGGLGTVYGADRTAEKVVGIIPQSARSWARSPALANSSNV
Ga0179593_101461143300026555Vadose Zone SoilMDDLIGRLVATVGVDRTAAEKAVGILLQSAIVGAIPASASSSDV
Ga0207944_102298323300027105Forest SoilPAESAGLVRGYMDDLIGRTGAMIGVDRTAAEKAVGIIPQSARSWARCSVLASSSDV
Ga0209590_1089963613300027882Vadose Zone SoilMDDLIGRLVANSGDRTAAERAVGIIPQSLRREEPSPMPCAGATMPASNPS
Ga0307278_1000662373300028878SoilMDDLIGRLVATVGVDRTAAEKAVGILLQSAIIGAIPASASSSDV
Ga0308197_1031457023300031093SoilAGLVRGYMDDLIGRNDATIGVDRTAAEKAVGIIPQSARSWARCSVLASSSDV
Ga0318538_1004134313300031546SoilMDDLIGRLVAKVGVDRTAAEKAVGIIPQSARSSARSPASASSFHI
Ga0318538_1078355613300031546SoilIGRLVATVGVDRTAAEKAVGIIPQSARSSARSPASASSFHI
Ga0318528_1006946823300031561SoilMDDLIGRLVAPIGVDRTAAEKAVGIIPQSARSSARSPVSASSSHF
Ga0318528_1014802713300031561SoilRECGAGERHMDDLIGRLVATVGVDRTAAEKAVGIIPQSARSSARSPASASSFHI
Ga0318528_1078749813300031561SoilMDDLIGRLVAPVGVDRTAAEKAVGIIPQSTRSSARSPASA
Ga0318555_1016952723300031640SoilMDDLIGRLVAPVGVDRTAAEKAVGIIPQSTRSSARS
Ga0318560_1029813523300031682SoilMDDLIGRLVAPVGVDRTAAEKAVGIIPQSTRSSARSPASASS
Ga0318496_1069750123300031713SoilAGERHMDDLIGRLVAKVGVDRTAAEKAVGIIPQSARSSARSPASASSFHI
Ga0306917_1014993813300031719SoilMDDLIGRLVATVGVDRTAAEKAVGIIPQSARSSARSPASA
Ga0318500_1000024793300031724SoilMDDLIGRLVATVGVDRTAAEKAVGIIPQSARSSARYPASASSFHI
Ga0318501_1002261923300031736SoilMDDLIGRLVAPIGVDRTAAEKAVGIIPQSARSSARSPVSASSSLF
Ga0318526_1000991713300031769SoilMTTPDLIGRLVAPVGVDRTAAEKAFGIIPQSARSSARSPASASSSHI
Ga0318521_1005716523300031770SoilMDDLIGRLVAPVGVDRTAAEKAFGIIPQSARSSARSPASASSSH
Ga0318497_1008149313300031805SoilRHMDDLIGRLVAPVGVDRTAAEKAVGIIPQSTRSSARSPASASSSHV
Ga0318511_1011846723300031845SoilMDDLIGRLVAPVGVDRTAAEKAVGIIPQSTRSSARSPAS
Ga0318544_1012794713300031880SoilMDDLIGRLVAPVGVDRTAAEKAVGIIPQSTRSSARSPASASSSHV
Ga0306925_1056517913300031890SoilDLIGRLVAPVGVDRTAAEKAVGIIPQSTRSSARSPASASSSPV
Ga0318536_1004746513300031893SoilMDDLIGRLVATVGVDRTAAEKAVGIIPQSARSSARSPASASSFHI
Ga0310909_1053484713300031947SoilECGAGERHMDDLIGRLVAKVGVDRTAAEKAVGIIPQSARSSARSPASASSFHI
Ga0318531_1009849813300031981SoilMDDLIGRLVAPIGVDRTAAEKAVGIIPQSARSSARSPVSASSSH
Ga0318569_1007393213300032010SoilSTCRECGAGERHMDDLIGRLVAPVGVDRTAAEKAFGIIPQSARSSARSPASASSSHI
Ga0318569_1042006313300032010SoilMDDLIGRLVAPVGVDRTAAEKAVGIIPQSTRSSARSP
Ga0318532_1029904513300032051SoilGERHMDDLIGRLVAPVGVDRTAAEKAFGIIPQSARSSARSPASASSSHI
Ga0318506_1039950423300032052SoilMDDLIGRLVAPVGVDRTAAEKAVGIIPQSTRSSARSPA
Ga0306924_1139903713300032076SoilMDDLIGRLVAKVGVDRTAAEKAVGIIPQSARSSARSP
Ga0318518_1057863523300032090SoilHMDDLIGRLVAPVGVDRTAAEKAVGIIPQSARSSARSPVSASSSHV

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Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
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