Metagenome Family F075153

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F075153
Family Type	Metagenome
Number of Sequences	119
Average Sequence Length	45 residues
Representative Sequence	ADQITDLLAKGNDAKKAPHKKAIAGVSADDAKAVADYVKTLK
Number of Associated Samples	105
Number of Associated Scaffolds	119

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	0.84 %
% of genes near scaffold ends (potentially truncated)	99.16 %
% of genes from short scaffolds (< 2000 bps)	89.08 %
Associated GOLD sequencing projects	101
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.54

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (66.387 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland (10.924 % of family members)
Environment Ontology (ENVO)	Unclassified (34.454 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (42.857 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 37.14% β-sheet: 0.00% Coil/Unstructured: 62.86%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.54
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.54
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 119 Family Scaffolds
PF00210	Ferritin	10.92
PF01663	Phosphodiest	7.56
PF00701	DHDPS	5.88
PF12802	MarR_2	1.68
PF01740	STAS	1.68
PF00903	Glyoxalase	1.68
PF13356	Arm-DNA-bind_3	0.84
PF01156	IU_nuc_hydro	0.84
PF01979	Amidohydro_1	0.84
PF01476	LysM	0.84
PF02897	Peptidase_S9_N	0.84
PF12706	Lactamase_B_2	0.84
PF04831	Popeye	0.84
PF00753	Lactamase_B	0.84

COG ID	Name	Functional Category	% Frequency in 119 Family Scaffolds
COG0329	4-hydroxy-tetrahydrodipicolinate synthase/N-acetylneuraminate lyase	Cell wall/membrane/envelope biogenesis [M]	11.76
COG1505	Prolyl endopeptidase PreP, S9A serine peptidase family	Amino acid transport and metabolism [E]	0.84
COG1770	Protease II	Amino acid transport and metabolism [E]	0.84
COG1957	Inosine-uridine nucleoside N-ribohydrolase	Nucleotide transport and metabolism [F]	0.84

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	66.39 %
Unclassified	root	N/A	33.61 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	66.39 %
Unclassified	root	N/A	33.61 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	66.39 %
Unclassified	root	N/A	33.61 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	45.38 %
Unclassified	root	N/A	33.61 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.84 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	33.61 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	28.57 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	13.45 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.84 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	33.61 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	27.73 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	13.45 %
Acidobacteria bacterium RIFCSPLOWO2_02_FULL_67_21	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_02_FULL_67_21	0.84 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.84 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	33.61 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	27.73 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	13.45 %
Burkholderiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	0.84 %
Acidobacteria bacterium RIFCSPLOWO2_02_FULL_67_21	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_02_FULL_67_21	0.84 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	33.61 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	27.73 %
Candidatus Koribacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	5.88 %
unclassified Acidobacteriaceae	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae	0.84 %
Candidatus Sulfotelmatobacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter	0.84 %
Burkholderiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	0.84 %
Acidobacteria bacterium RIFCSPLOWO2_02_FULL_67_21	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_02_FULL_67_21	0.84 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	33.61 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	27.73 %
Candidatus Koribacter versatilis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	5.04 %
Acidobacteriaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium	0.84 %
Candidatus Sulfotelmatobacter kueseliae	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter kueseliae	0.84 %
Burkholderiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	0.84 %
Acidobacteria bacterium RIFCSPLOWO2_02_FULL_67_21	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_02_FULL_67_21	0.84 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000364\|INPhiseqgaiiFebDRAFT_101204512	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	733	Open in IMG/M
3300001356\|JGI12269J14319_10118681	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1229	Open in IMG/M
3300004081\|Ga0063454_101187801	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	630	Open in IMG/M
3300004152\|Ga0062386_101328490	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	598	Open in IMG/M
3300005332\|Ga0066388_104192997	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	735	Open in IMG/M
3300005435\|Ga0070714_101643041	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	628	Open in IMG/M
3300005436\|Ga0070713_100981615	Not Available	814	Open in IMG/M
3300005437\|Ga0070710_10410492	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	910	Open in IMG/M
3300005437\|Ga0070710_10693715	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	718	Open in IMG/M
3300005439\|Ga0070711_100956022	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	733	Open in IMG/M
3300005468\|Ga0070707_101798152	All Organisms → cellular organisms → Bacteria → Acidobacteria	580	Open in IMG/M
3300005529\|Ga0070741_10137349	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium	2486	Open in IMG/M
3300005539\|Ga0068853_101432924	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	668	Open in IMG/M
3300005614\|Ga0068856_101234849	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	763	Open in IMG/M
3300005712\|Ga0070764_10265370	All Organisms → cellular organisms → Bacteria	982	Open in IMG/M
3300005874\|Ga0075288_1036080	Not Available	740	Open in IMG/M
3300006052\|Ga0075029_100506194	Not Available	798	Open in IMG/M
3300006102\|Ga0075015_100604575	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	642	Open in IMG/M
3300006162\|Ga0075030_100363276	Not Available	1154	Open in IMG/M
3300006175\|Ga0070712_101720231	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	549	Open in IMG/M
3300006176\|Ga0070765_100366206	All Organisms → cellular organisms → Bacteria	1342	Open in IMG/M
3300006358\|Ga0068871_101075365	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	751	Open in IMG/M
3300006854\|Ga0075425_100173099	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2478	Open in IMG/M
3300006954\|Ga0079219_11104441	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	673	Open in IMG/M
3300009522\|Ga0116218_1371738	Not Available	638	Open in IMG/M
3300009545\|Ga0105237_10701852	Not Available	1018	Open in IMG/M
3300009628\|Ga0116125_1000958	All Organisms → cellular organisms → Bacteria	13012	Open in IMG/M
3300009630\|Ga0116114_1072834	Not Available	940	Open in IMG/M
3300009645\|Ga0116106_1024107	All Organisms → cellular organisms → Bacteria	2121	Open in IMG/M
3300009762\|Ga0116130_1287993	All Organisms → cellular organisms → Bacteria	524	Open in IMG/M
3300009764\|Ga0116134_1318599	Not Available	534	Open in IMG/M
3300010343\|Ga0074044_10516565	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_02_FULL_67_21	780	Open in IMG/M
3300010358\|Ga0126370_11708343	All Organisms → cellular organisms → Bacteria	606	Open in IMG/M
3300010366\|Ga0126379_10473162	All Organisms → cellular organisms → Bacteria → Acidobacteria	1319	Open in IMG/M
3300010376\|Ga0126381_100048761	All Organisms → cellular organisms → Bacteria → Acidobacteria	5173	Open in IMG/M
3300010376\|Ga0126381_100787046	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1365	Open in IMG/M
3300010379\|Ga0136449_100952730	All Organisms → cellular organisms → Bacteria	1390	Open in IMG/M
3300010398\|Ga0126383_11186971	Not Available	853	Open in IMG/M
3300010398\|Ga0126383_12183886	Not Available	640	Open in IMG/M
3300012212\|Ga0150985_110665687	Not Available	655	Open in IMG/M
3300012212\|Ga0150985_112810462	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	500	Open in IMG/M
3300012469\|Ga0150984_107163493	Not Available	524	Open in IMG/M
3300012469\|Ga0150984_107278369	Not Available	693	Open in IMG/M
3300012971\|Ga0126369_12636987	Not Available	587	Open in IMG/M
3300012989\|Ga0164305_10635919	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	863	Open in IMG/M
3300014164\|Ga0181532_10340547	Not Available	842	Open in IMG/M
3300014165\|Ga0181523_10103032	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1712	Open in IMG/M
3300014165\|Ga0181523_10516790	All Organisms → cellular organisms → Bacteria	659	Open in IMG/M
3300014492\|Ga0182013_10234573	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1074	Open in IMG/M
3300014493\|Ga0182016_10404296	Not Available	807	Open in IMG/M
3300014501\|Ga0182024_10206116	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	2682	Open in IMG/M
3300016341\|Ga0182035_11250595	All Organisms → cellular organisms → Bacteria	664	Open in IMG/M
3300016357\|Ga0182032_10408286	All Organisms → cellular organisms → Bacteria	1100	Open in IMG/M
3300017932\|Ga0187814_10342976	Not Available	576	Open in IMG/M
3300017933\|Ga0187801_10194896	All Organisms → cellular organisms → Bacteria	801	Open in IMG/M
3300017933\|Ga0187801_10317775	Not Available	636	Open in IMG/M
3300017937\|Ga0187809_10110980	Not Available	926	Open in IMG/M
3300017941\|Ga0187850_10090466	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1499	Open in IMG/M
3300017972\|Ga0187781_11333450	Not Available	530	Open in IMG/M
3300017973\|Ga0187780_11214095	Not Available	553	Open in IMG/M
3300017994\|Ga0187822_10155641	All Organisms → cellular organisms → Bacteria	737	Open in IMG/M
3300018009\|Ga0187884_10387469	Not Available	562	Open in IMG/M
3300018013\|Ga0187873_1090143	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1229	Open in IMG/M
3300018017\|Ga0187872_10348489	All Organisms → cellular organisms → Bacteria	636	Open in IMG/M
3300018021\|Ga0187882_1257076	All Organisms → cellular organisms → Bacteria	675	Open in IMG/M
3300018025\|Ga0187885_10106047	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	1361	Open in IMG/M
3300018030\|Ga0187869_10165168	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter kueseliae	1093	Open in IMG/M
3300018034\|Ga0187863_10259799	Not Available	965	Open in IMG/M
3300018035\|Ga0187875_10185757	Not Available	1151	Open in IMG/M
3300018038\|Ga0187855_10292855	Not Available	953	Open in IMG/M
3300018046\|Ga0187851_10433930	All Organisms → cellular organisms → Bacteria	749	Open in IMG/M
3300018047\|Ga0187859_10889838	Not Available	513	Open in IMG/M
3300018057\|Ga0187858_10809854	All Organisms → cellular organisms → Bacteria	554	Open in IMG/M
3300018062\|Ga0187784_11329943	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	570	Open in IMG/M
3300018085\|Ga0187772_10774937	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	691	Open in IMG/M
3300018085\|Ga0187772_10851896	Not Available	660	Open in IMG/M
3300018086\|Ga0187769_10524422	Not Available	894	Open in IMG/M
3300018088\|Ga0187771_10268971	Not Available	1424	Open in IMG/M
3300018088\|Ga0187771_10941463	Not Available	733	Open in IMG/M
3300018090\|Ga0187770_10045690	All Organisms → cellular organisms → Bacteria	3137	Open in IMG/M
3300018090\|Ga0187770_10874276	All Organisms → cellular organisms → Bacteria	721	Open in IMG/M
3300019787\|Ga0182031_1111884	All Organisms → cellular organisms → Bacteria → Acidobacteria	1321	Open in IMG/M
3300019787\|Ga0182031_1120398	All Organisms → cellular organisms → Bacteria	535	Open in IMG/M
3300019787\|Ga0182031_1143710	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	1633	Open in IMG/M
3300020581\|Ga0210399_11346911	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	560	Open in IMG/M
3300024323\|Ga0247666_1038732	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	982	Open in IMG/M
3300025404\|Ga0208936_1012198	Not Available	1067	Open in IMG/M
3300025406\|Ga0208035_1045536	All Organisms → cellular organisms → Bacteria	683	Open in IMG/M
3300025412\|Ga0208194_1060900	Not Available	579	Open in IMG/M
3300025928\|Ga0207700_10008160	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	6468	Open in IMG/M
3300025929\|Ga0207664_11751154	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	544	Open in IMG/M
3300026078\|Ga0207702_10920552	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	866	Open in IMG/M
3300026078\|Ga0207702_12059967	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	561	Open in IMG/M
3300027073\|Ga0208366_1025525	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	654	Open in IMG/M
3300027634\|Ga0209905_1013529	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1087	Open in IMG/M
3300027869\|Ga0209579_10309709	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	852	Open in IMG/M
3300027905\|Ga0209415_10013803	All Organisms → cellular organisms → Bacteria	13270	Open in IMG/M
3300028800\|Ga0265338_10419874	Not Available	951	Open in IMG/M
3300028800\|Ga0265338_10788353	Not Available	652	Open in IMG/M
3300028866\|Ga0302278_10174268	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	1094	Open in IMG/M
3300028909\|Ga0302200_10497337	Not Available	556	Open in IMG/M
3300029817\|Ga0247275_1156736	All Organisms → cellular organisms → Bacteria	571	Open in IMG/M
3300029907\|Ga0311329_10624318	Not Available	710	Open in IMG/M
3300029911\|Ga0311361_10914296	Not Available	752	Open in IMG/M
3300029939\|Ga0311328_10106730	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	2323	Open in IMG/M
3300031128\|Ga0170823_10674551	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1000	Open in IMG/M
3300031231\|Ga0170824_114163738	Not Available	895	Open in IMG/M
3300031788\|Ga0302319_11156369	Not Available	720	Open in IMG/M
3300031879\|Ga0306919_10959913	All Organisms → cellular organisms → Bacteria	654	Open in IMG/M
3300031912\|Ga0306921_12283368	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	568	Open in IMG/M
3300032174\|Ga0307470_10026527	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2697	Open in IMG/M
3300032205\|Ga0307472_100623089	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	956	Open in IMG/M
3300032805\|Ga0335078_10713245	All Organisms → cellular organisms → Bacteria	1240	Open in IMG/M
3300032893\|Ga0335069_10036108	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	6637	Open in IMG/M
3300032897\|Ga0335071_10282852	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	1612	Open in IMG/M
3300033004\|Ga0335084_10879204	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	907	Open in IMG/M
3300033134\|Ga0335073_10584779	Not Available	1251	Open in IMG/M
3300033158\|Ga0335077_10042783	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	5565	Open in IMG/M
3300033807\|Ga0314866_006247	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1463	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	89.08%
Host-Associated	Host-Associated	10.92%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	61.34%
Aquatic	Environmental → Aquatic	27.73%
Plants	Host-Associated → Plants	10.92%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	56.30%
Freshwater	Environmental → Aquatic → Freshwater	25.21%
Peat	Environmental → Terrestrial → Peat	5.04%
Rhizoplane	Host-Associated → Plants → Rhizoplane	5.04%
Rhizosphere	Host-Associated → Plants → Rhizosphere	5.04%
Sediment	Environmental → Aquatic → Sediment	2.52%
Roots	Host-Associated → Plants → Roots	0.84%

Habitat	Taxonomy	Distribution
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	25.21%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	22.69%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	21.85%
Loam	Environmental → Terrestrial → Soil → Loam	11.76%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	5.04%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	3.36%
Soil	Host-Associated → Plants → Rhizosphere → Soil	3.36%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	2.52%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	1.68%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	1.68%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.84%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	15.97%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	14.29%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	12.61%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	8.40%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	7.56%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	6.72%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	5.88%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	5.04%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	4.20%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	3.36%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	3.36%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	3.36%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	2.52%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	1.68%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	1.68%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.84%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	0.84%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.84%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.84%

Habitat	Taxonomy	Distribution
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	10.92%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	8.40%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	6.72%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	5.88%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	5.88%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	5.04%
Bog	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Bog	5.04%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	4.20%
Bog	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Bog	4.20%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	3.36%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	3.36%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	3.36%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	2.52%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	2.52%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	1.68%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	1.68%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	1.68%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.68%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	1.68%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	1.68%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	1.68%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere	1.68%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	1.68%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	0.84%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.84%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.84%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.84%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	0.84%
Rice Paddy Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Rice Paddy Soil	0.84%
Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Peatland	0.84%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	0.84%
Thawing Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Thawing Permafrost	0.84%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost	0.84%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.84%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.84%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	0.84%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	0.84%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.84%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.84%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300001356	Peat soil microbial communities from Weissenstadt, Germany - SII-SIP-2007	Environmental	Open in IMG/M
3300004081	Grasslands soil microbial communities from Hopland, California, USA - 2 (version 2)	Environmental	Open in IMG/M
3300004152	Coassembly of ECP12_OM1, ECP12_OM2, ECP12_OM3	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005437	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005529	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen16_06102014_R1	Environmental	Open in IMG/M
3300005539	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2	Host-Associated	Open in IMG/M
3300005614	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2	Host-Associated	Open in IMG/M
3300005712	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 4	Environmental	Open in IMG/M
3300005874	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_20C_0N_404	Environmental	Open in IMG/M
3300006052	Freshwater sediment microbial communities from North America - Little Laurel Run_MetaG_LLR_2013	Environmental	Open in IMG/M
3300006102	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2013	Environmental	Open in IMG/M
3300006162	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300006358	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006954	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control	Environmental	Open in IMG/M
3300009522	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_5_LS metaG	Environmental	Open in IMG/M
3300009545	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG	Host-Associated	Open in IMG/M
3300009628	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_16_10	Environmental	Open in IMG/M
3300009630	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_10_40	Environmental	Open in IMG/M
3300009645	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_6_40	Environmental	Open in IMG/M
3300009762	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_17_40	Environmental	Open in IMG/M
3300009764	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_19_40	Environmental	Open in IMG/M
3300010343	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM1	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300014164	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin11_30_metaG	Environmental	Open in IMG/M
3300014165	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_30_metaG	Environmental	Open in IMG/M
3300014492	Permafrost microbial communities from Stordalen Mire, Sweden - 612S2M metaG	Environmental	Open in IMG/M
3300014493	Permafrost microbial communities from Stordalen Mire, Sweden - 712S2M metaG	Environmental	Open in IMG/M
3300014501	Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300017932	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW-S_4	Environmental	Open in IMG/M
3300017933	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_1	Environmental	Open in IMG/M
3300017937	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_4	Environmental	Open in IMG/M
3300017941	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_4_150	Environmental	Open in IMG/M
3300017972	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300017973	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_20_MG	Environmental	Open in IMG/M
3300017994	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_2	Environmental	Open in IMG/M
3300018009	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_20_40	Environmental	Open in IMG/M
3300018013	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_16_100	Environmental	Open in IMG/M
3300018017	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_16_40	Environmental	Open in IMG/M
3300018021	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_150	Environmental	Open in IMG/M
3300018025	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_20_100	Environmental	Open in IMG/M
3300018030	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_13_100	Environmental	Open in IMG/M
3300018034	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_11_10	Environmental	Open in IMG/M
3300018035	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_17_10	Environmental	Open in IMG/M
3300018038	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_10	Environmental	Open in IMG/M
3300018046	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_6_10	Environmental	Open in IMG/M
3300018047	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_10_10	Environmental	Open in IMG/M
3300018057	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_150	Environmental	Open in IMG/M
3300018062	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018085	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018086	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_10_MG	Environmental	Open in IMG/M
3300018088	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_10_MG	Environmental	Open in IMG/M
3300018090	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300019787	Permafrost microbial communities from Stordalen Mire, Sweden - 812S3M metaG (PacBio error correction)	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300024323	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK07	Environmental	Open in IMG/M
3300025404	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_10_10 (SPAdes)	Environmental	Open in IMG/M
3300025406	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_11_10 (SPAdes)	Environmental	Open in IMG/M
3300025412	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_19_10 (SPAdes)	Environmental	Open in IMG/M
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025929	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300026078	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300027073	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF010 (SPAdes)	Environmental	Open in IMG/M
3300027634	Thawing permafrost microbial communities from the Arctic, studying carbon transformations - Permafrost 812S1M	Environmental	Open in IMG/M
3300027869	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027905	Peat soil microbial communities from Weissenstadt, Germany - SII-SIP-2007 (SPAdes)	Environmental	Open in IMG/M
3300028800	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG	Host-Associated	Open in IMG/M
3300028866	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Bog_N3_2	Environmental	Open in IMG/M
3300028909	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_N3_1	Environmental	Open in IMG/M
3300029817	Soil microbial communities from Marcell Experimental Forest, Minnesota, USA - Bog25	Environmental	Open in IMG/M
3300029907	I_Bog_N1 coassembly	Environmental	Open in IMG/M
3300029911	III_Bog_N2 coassembly	Environmental	Open in IMG/M
3300029939	I_Bog_E3 coassembly	Environmental	Open in IMG/M
3300031128	Oak Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031788	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Bog_T0_2	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300032805	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.2	Environmental	Open in IMG/M
3300032893	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.1	Environmental	Open in IMG/M
3300032897	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.5	Environmental	Open in IMG/M
3300033004	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.4	Environmental	Open in IMG/M
3300033134	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.2	Environmental	Open in IMG/M
3300033158	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.1	Environmental	Open in IMG/M
3300033807	Tropical peat soil microbial communities from peatlands in Loreto, Peru - MAQ_100_10	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
INPhiseqgaiiFebDRAFT_1012045121	3300000364	Soil	GKVGPAVKGSSLSADQITNLLVKGEDAKKAPHKKAIAGVSADDAKAIADYIKTLK*
JGI12269J14319_101186812	3300001356	Peatlands Soil	KIGPKLAGTAVTADQIVDMLTKGNDAKKVPHKKPLSGLSADDAKSVADFVKSLK*
Ga0063454_1011878012	3300004081	Soil	GPEGQGKVGPAVKGTTVSVDQITDLLTKGAEAKKAPHKKSISGLSADDAKAVADYVKTLK
Ga0062386_1013284901	3300004152	Bog Forest Soil	ADEIADLLTKGNDAKKPPHKKAVGGLTADDAKAVADYVKTLK*
Ga0066388_1041929973	3300005332	Tropical Forest Soil	KVGPTVKGSTLTADQINDQLRKGNDAQEGSHKKAVAGVSAEVAKAVADYVKTVK*
Ga0070714_1016430412	3300005435	Agricultural Soil	TSLTADQITDLLTKGNDAKKAPHKKAMSTVPADDAKAVADFVKTLK*
Ga0070713_1009816151	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	KGTALSADQITDLLTKGEDAKKAPHKKALSGLTADDAKAVADYVKSLK*
Ga0070710_104104922	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	EGQGKIGPAVKGISLSTEQITDLLTKGQEAKKAPHKKAVAGLSADDAKAVAEYVKTLK*
Ga0070710_106937152	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	DQITDLLVKGEDAKKAPHKKAIAGVSADDAKAIADYIKTLK*
Ga0070711_1009560221	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	ALKGTSLTEDQIADMLTKGDEAKKAPHKKAMSGFSADDAKAVATFVKGLK*
Ga0070707_1017981521	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	LKGTTLTADQIADMLTKGNDARKPPHKKPLASLSADHAKAVADFVKTLK*
Ga0070741_101373493	3300005529	Surface Soil	LTKGAEAKKAPHKKPVSGVSADDAKAVAEYVKSLK*
Ga0068853_1014329241	3300005539	Corn Rhizosphere	STEQITDLLTKGEEAKKAPHKKAMAGLSADDAKAVAEYVKTLK*
Ga0068856_1012348491	3300005614	Corn Rhizosphere	SADQITDLLVKGEDAKKAPHKKAIAGVSADDAKAIADYIKTLK*
Ga0070764_102653704	3300005712	Soil	TKGDDAKKAPHKKAVAGVAADDAKAVAEYVKSLK*
Ga0075288_10360801	3300005874	Rice Paddy Soil	EGQGKIGPAVKGTTLSADQITDLLTKGAEAKKAPHKKSISGLSADDAKAVAEHVKTLK*
Ga0075029_1005061941	3300006052	Watersheds	KGTSVTADQIVEMLTKGNDAKKPPHKKPLSGLSAEDAKAVADFVKTLK*
Ga0075015_1006045752	3300006102	Watersheds	HGPEGQGKVGPAVKGTTLTADQITDLLAKGNDAKKNPHKKAVAGVSADDAKAVADYVKTLK*
Ga0075030_1003632761	3300006162	Watersheds	GTTLTADQITDLLAKGNDAKKVPHKKAVVGVSAEDAKAVADYVKTLK*
Ga0070712_1017202312	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	QITDLLTKGEDAKKAPHKKAMAGLSADDAKAVAEYVKTLK*
Ga0070765_1003662063	3300006176	Soil	SADQIAVLLTKGDDAKKPPHKKPMSSLSADDAKAVADFVKSLQ*
Ga0068871_1010753652	3300006358	Miscanthus Rhizosphere	SLSADQITDLLVKGEDAKKAPHKKAIAGVSADDAKAIADYIKTLK*
Ga0075425_1001730991	3300006854	Populus Rhizosphere	PAVKGSSLSADQITDLLVKGEDAKKAPHKKAIAGVSADDAKAIADYIKTLK*
Ga0079219_111044411	3300006954	Agricultural Soil	QITDLLTKGGEAKKAPHKKAIAGLSADDAKAVAEYVKTLK*
Ga0116218_13717381	3300009522	Peatlands Soil	TKGDDAKKAPHKKALAGLSADDAKALATYVKSLK*
Ga0105237_107018521	3300009545	Corn Rhizosphere	QITDLLTKGEEAKKAPHKKAMAGLSADDVKAVAEYVKTLK*
Ga0116125_10009581	3300009628	Peatland	IADLLTKGNDTRKMPHKKPVSGLSADDAKAVADYVKTLK*
Ga0116114_10728343	3300009630	Peatland	LSNGDDAKKPPHKKALNGVSADDAKAVADFVKSLK*
Ga0116106_10241071	3300009645	Peatland	PERQGKVGSVLKGTSLTADQITELLTKGNDAKKQPHKKALSGVSADDAKAVADFVKTLK*
Ga0116130_12879931	3300009762	Peatland	TFLTTGDDSKKAPHKKPVSGLTADDAKAVGEYVNSLK*
Ga0116134_13185992	3300009764	Peatland	TSLTAEQITDLLAKGNDARKPPHKKALSGVSADDAKAVADFVKTLK*
Ga0074044_105165651	3300010343	Bog Forest Soil	KRADEIVAFLTTGDESKKAPHKKPVGGLSADDAKAVADYVKSLK*
Ga0126370_117083431	3300010358	Tropical Forest Soil	LLTKGNDAKKAPHKKAVAGVSADDAKAAADYVKTLK*
Ga0126379_104731622	3300010366	Tropical Forest Soil	VTADQIIDMLTKGNDAKKPPHKKPLSGLTPEDAKAVADFVKSLK*
Ga0126381_1000487615	3300010376	Tropical Forest Soil	TDLLTKGDDAKKAPHKKAVAGLSADDAKAAAEYVKTLK*
Ga0126381_1007870462	3300010376	Tropical Forest Soil	EGQGKVGPAVKGTSLSADQITDLLTKGEDAKKAPHKKAIAGLSADDAKAVADYAKTLK*
Ga0136449_1009527301	3300010379	Peatlands Soil	DVQISDLLTKGEDAKKAPHKKGLAGLSADDAKALATYVKALK*
Ga0126383_111869711	3300010398	Tropical Forest Soil	DLLTKGEDAKKAPHKKAISGLSPEDAKAVADYVKTLK*
Ga0126383_121838861	3300010398	Tropical Forest Soil	LTKGNDAKKPPHKKPLSGLTPEDAKAVADFVKSLK*
Ga0150985_1106656871	3300012212	Avena Fatua Rhizosphere	LTSGQITDLLTKGDEARKAPHKKPLSSMAADDAKAVADFVKTLK*
Ga0150985_1128104621	3300012212	Avena Fatua Rhizosphere	EGQGKVGPAVKGTSMTADQITDLLTKGTDAKKAPHKKAVTGVAAEDAKAVAEYVKTLK*
Ga0150984_1071634931	3300012469	Avena Fatua Rhizosphere	PEWASGRGQEGQARGAPAVKGTTLGADQITDLLTKGAEAKKAPHKKSISGLSADDAKAVADYVKTLK*
Ga0150984_1072783691	3300012469	Avena Fatua Rhizosphere	PALKRSALTSGQITDLLTKGDEARKAPHKKPLSSMAADDAKAVADFVKTLK*
Ga0126369_126369872	3300012971	Tropical Forest Soil	DLLTKGNDAKKAPHKKEISGVAGDDAKGVAEYVKTLK*
Ga0164305_106359191	3300012989	Soil	GPEGQGKVGPAVKGTALTADQITDLIVKGEDAKKAPHKKAMAGVTADDAKAVADYVKTLK
Ga0181532_103405471	3300014164	Bog	GPEGQGKVGPVLKGTSLTADQITELLTKGNDAKKPPHKKALSGVSADDAKAVADFVKTLK
Ga0181523_101030324	3300014165	Bog	GQIADLLTKGNDAKKAPHKKPVALSADEAKAVATFVTTLK*
Ga0181523_105167901	3300014165	Bog	SLTADQISDILTKGNDAKKAPHKKPVSGVSADDAKAVAEYVKSLK*
Ga0182013_102345733	3300014492	Bog	TAKSADEIATFITTGDEAKKAPHKKPIAGVSAEDAKAVADYIKSLK*
Ga0182016_104042961	3300014493	Bog	LLTKGDDAKKAPHKKAISSLSADDAKAVAAFVKNLK*
Ga0182024_102061166	3300014501	Permafrost	TELLTKGNDAKKPPHKKALSGVSADDAKAVADFVKTLK*
Ga0182035_112505951	3300016341	Soil	LLTKGNDAKKAPHKKAVAGVSADDAKAAADYVKTLK
Ga0182032_104082861	3300016357	Soil	TADQITDLLTKGNDAKKAPHKKAVAGVSADDAKAAADYVKTLK
Ga0187814_103429762	3300017932	Freshwater Sediment	LLTKGNDAKKVPHKKAVAGVSADDAKAVADYVKTLK
Ga0187801_101948961	3300017933	Freshwater Sediment	LKGTSLTSDQIVALLTKGNDAKKAPHKKEISGVTPDDAKAVADFVKTLK
Ga0187801_103177751	3300017933	Freshwater Sediment	QISDLLTKGDDAKKAPHKKAVSGLSADDAKAVAAFVKTLK
Ga0187809_101109801	3300017937	Freshwater Sediment	SLSADQITDLLTKGEDAKKAPHKKAITGLSADDAKAAAEYVKSLK
Ga0187850_100904661	3300017941	Peatland	TLPAGQIADLLTKGNDAKKAPHKKPVALSADEAKAVATFVTTLK
Ga0187781_113334502	3300017972	Tropical Peatland	LTKGDDAKKAPHKKPISGLSDDDAKAVADFVKTLK
Ga0187780_112140952	3300017973	Tropical Peatland	ADGAGKIGPALKGSALTADQINDLLTKGNDAKKVPHKKPIAGLSADDSKAVADYVKTLK
Ga0187822_101556412	3300017994	Freshwater Sediment	CHGAEGQGKIGPALKGVGLSEEQIVALLTKGDEAKKPPHKKPVNGLSADDAKAVAEHVKGLK
Ga0187884_103874691	3300018009	Peatland	HGPEGQGKVGPVLKGTSLTADQITELLTKGNDAKKPPHKKALSGVSADDAKAVADFVKTL
Ga0187873_10901431	3300018013	Peatland	TDLLTKGNDAKKAPHKKALSSLSADDAKAVAAYVKTLK
Ga0187872_103484891	3300018017	Peatland	VGPALKGTNLSADQIVALLSNGDDAKKPPHKKALNGVSADDAKAVADFVKSLK
Ga0187882_12570761	3300018021	Peatland	KVGPALKGTNLSADQIVALLSNGDDAKKPPHKKALNGVSADDAKAVADFVKSLK
Ga0187885_101060471	3300018025	Peatland	KVGPVLKGTSLTADQITELLTKGNDAKKPPHKKALSGVSADDAKAVADFVKTLK
Ga0187869_101651681	3300018030	Peatland	EGQGKVGPALKGTNLSADQIVALLSNGDDAKKPPHKKALNGVSADDAKAVADFVKSLK
Ga0187863_102597991	3300018034	Peatland	IADFLTKGDDAKKAPHKKPLNGLSADDAKAVAEYVKTLK
Ga0187875_101857571	3300018035	Peatland	LLTTGDDAKKAPHKKAISGLSADDAKAVAAFVKTLK
Ga0187855_102928552	3300018038	Peatland	PALKGTALTEDQITGLLTKGDDAKKAPHKKPLTLSADDAKAVAAFVKTLK
Ga0187851_104339301	3300018046	Peatland	LKGTSKSADEIVAFLTTGDESKKAPHKKPVGGLSADDAKAVADYVKSLK
Ga0187859_108898381	3300018047	Peatland	ALTADQITALLTAGDDAKKAPHKKAISGLSPDDAKAVAGFVKTLK
Ga0187858_108098541	3300018057	Peatland	LLTKGDDAKKAPHKKALSGVSADDAKALATYVKALK
Ga0187784_113299431	3300018062	Tropical Peatland	PKLAGTAVTADQITDMLTKGDDAKKPPHKKPLSGLSADDAKAVAAFVKTLK
Ga0187772_107749372	3300018085	Tropical Peatland	LTKGNDAKKVPHKKAINGLSADDVKAVAAFVKTLK
Ga0187772_108518961	3300018085	Tropical Peatland	LLTKGADARKPPHKKPFSLSADEIKAVAAFVKTLK
Ga0187769_105244221	3300018086	Tropical Peatland	ADEITDLLTKGNDAKKPPHKKPAAGLSADDAKAVAAFVKTLK
Ga0187771_102689711	3300018088	Tropical Peatland	KVGPALKGASLNADQIANLLTKGDDAKKVPHKKPMSGLSADDAKAVAEFVKSLK
Ga0187771_109414631	3300018088	Tropical Peatland	TALTADQIADLLTKGDDAKKPPHKKPFAGLSADDIKAVAAFVKSLK
Ga0187770_100456903	3300018090	Tropical Peatland	LKGTSLSADEITDLLTKGNDAKKPPHKKPAAGLSADDAKAVAAFVKTLK
Ga0187770_108742761	3300018090	Tropical Peatland	ADLLTKGNEAKKAPHKKPLSGLSADDAKAVAAFVKGLK
Ga0182031_11118844	3300019787	Bog	ITTGDEAKKAPHKKPIAGVSAEDAKAVADYIKSLK
Ga0182031_11203982	3300019787	Bog	TAKSADEIATFITTGDEAKKAPHKKPIAGVSAEDAKAVADYIKSLK
Ga0182031_11437104	3300019787	Bog	AKSADEIATFITTGDEAKKAPHKKPIAGVSAEDAKAVADYIKSLK
Ga0210399_113469111	3300020581	Soil	EGQGKIGPAVKGATLTADQITDLLAKGNDAKKAPHKKAIASVSADDAKAVADYVETLK
Ga0247666_10387321	3300024323	Soil	GPAVKGSSLSADQITDLLVKGEDAKKAPHKKAIAGVSADDAKAIADYIKTLK
Ga0208936_10121981	3300025404	Peatland	IADLLTKGDDAKKAPHKKAISSLSADDAKAVAAFVKNLK
Ga0208035_10455361	3300025406	Peatland	LITTGDDSKKPPHKKPVTGLSPDDAKAVADYIKSLK
Ga0208194_10609002	3300025412	Peatland	ALKGTTLGADKIVALLTTGDDAKKAPHKKPISGLTADDAKAVADYVKTLK
Ga0207700_100081609	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	SALTADQITDLLVKGNDAKKVPHKKAVAGVSAEDAKAIADYVKTLK
Ga0207664_117511541	3300025929	Agricultural Soil	LIVKGEDAKKAPHKKAMAGVTADDAKAVADYVKTLK
Ga0207702_109205522	3300026078	Corn Rhizosphere	AVKGISLSTEQITDLLTKGEEAKKAPHKKAMAGLSADDAKAVAEYVKTLK
Ga0207702_120599672	3300026078	Corn Rhizosphere	KGSSLSADQITDLLVKGEDAKKAPHKKAIAGVSADDAKAIADYIKTLK
Ga0208366_10255251	3300027073	Forest Soil	ADQITDLLAKGNDAKKAPHKKAIAGVSADDAKAVADYVKTLK
Ga0209905_10135293	3300027634	Thawing Permafrost	FITTGDEAKKAPHKKPIAGVSAEDAKAVADYIKSLK
Ga0209579_103097091	3300027869	Surface Soil	LLAKGDDAKKAPHKKAISGVAGDDAKAVADYVKSLK
Ga0209415_100138031	3300027905	Peatlands Soil	LKGTKLTDAQISDLLTKGDDAKKAPHKKAIASLSADDAKALATYVKSLK
Ga0265338_104198742	3300028800	Rhizosphere	ADQIVDVLTKGNDAKKAPHKKPLSGMAADDAKAVAAYVKGMK
Ga0265338_107883532	3300028800	Rhizosphere	DQIIDLLTKGNDAKKAPHKKALTGLSADDAKSVADFVKGLK
Ga0302278_101742681	3300028866	Bog	GPKLAGTSLTADQISDLLTKGDDAKKAPHKKPVSGLSADDAKAVAAFVKTLK
Ga0302200_104973372	3300028909	Bog	LTADQIADLLTKGDDAKKAPHKKAFSSLSADDAKAVAAFVKNLK
Ga0247275_11567361	3300029817	Soil	LSADQIVALLSNGDDAKKPPHKKALNGVSADDAKAVADFVKSLK
Ga0311329_106243182	3300029907	Bog	LLTKGDDAKKAPHKKPVSGLSADDAKAVAAFVKTLK
Ga0311361_109142962	3300029911	Bog	SSGDIADLLTKGNDTRKMPHKKPVSGLSADDAKAVADYVKTLK
Ga0311328_101067301	3300029939	Bog	ADLLTKGDDAKKAPHKKAFSSLSADDAKAVAAFVKNLK
Ga0170823_106745513	3300031128	Forest Soil	DLLAKGNDTKKAPHKKAIAGVSADDAKAVADYVKTLK
Ga0170824_1141637381	3300031231	Forest Soil	QITDLLTKGDDAKKAPHKKAMSGLSADDVKAVAAFVKTLK
Ga0302319_111563692	3300031788	Bog	DLLTKGNDTRKMPHKKPVSGLSADDAKAVADYVKTLK
Ga0306919_109599131	3300031879	Soil	PAVKGSSLTADQITDLLTKGNDAKKAPHKKAVAGVSADDAKAAADYVKTLK
Ga0306921_122833681	3300031912	Soil	VKGTSLSADQINDLLTKGNDAKKAPHKKAVAGVAAEDAKAVADYVKTLK
Ga0307470_100265277	3300032174	Hardwood Forest Soil	TADQITDLLAKGNDTKKAPHKKAIAGVSADDAKAVADYVKTLK
Ga0307472_1006230891	3300032205	Hardwood Forest Soil	GPEGQGKVGPAVKGATLTTDQITDLLAKGNDAKKAPHKKAIAGLSADDAKAVADYVKTLK
Ga0335078_107132451	3300032805	Soil	GADGGGKVGPALKGNSMSADQIAAFLTKGDDARKAPHKKPISGLSPDDAKSVAEYVKSLK
Ga0335069_100361086	3300032893	Soil	FLTKGDDAKKAPHKKAITGLSADDAKSVAEYVKTLK
Ga0335071_102828523	3300032897	Soil	TSLSEDQIAGVLTKGDDAKKPPHKKPLNGLSADDAKAVAAFVKSLK
Ga0335084_108792041	3300033004	Soil	QITDLLTKGEDAKKAPHKKAINGVSADDAKAVADYVKTLK
Ga0335073_105847791	3300033134	Soil	SLSAEQITDLLTKGDAAKKAPHKAAISSLAADDAKAVAEFVKSLK
Ga0335077_100427831	3300033158	Soil	SLTADQITDLLTKGEDAKKAPHKKALAGLSADDAKAVAEYVKTLK
Ga0314866_006247_55_216	3300033807	Peatland	VGPALKGTSLNEDQISGLLAKGDDTKKPPHKKPMNGLSADDAKAVAAFVKTLK

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F075153

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences