NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome / Metatranscriptome Family F075116

Metagenome / Metatranscriptome Family F075116

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F075116
Family Type Metagenome / Metatranscriptome
Number of Sequences 119
Average Sequence Length 55 residues
Representative Sequence MEIFLNLWDELDDLAGACRHIATSFAVEAAALARPLATLVLTTAAVPLSWLTSLKNLI
Number of Associated Samples 98
Number of Associated Scaffolds 119

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 57.14 %
% of genes near scaffold ends (potentially truncated) 26.89 %
% of genes from short scaffolds (< 2000 bps) 78.99 %
Associated GOLD sequencing projects 88
AlphaFold2 3D model prediction Yes
3D model pTM-score0.44

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Bacteria (89.916 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil
(18.487 % of family members)
Environment Ontology (ENVO) Unclassified
(33.613 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Plant → Plant rhizosphere
(43.697 % of family members)


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Multiple Sequence Alignments

Select alignment to view:      

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 65.12%    β-sheet: 0.00%    Coil/Unstructured: 34.88%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.44
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 119 Family Scaffolds
PF01656CbiA 39.50
PF02518HATPase_c 21.01
PF13589HATPase_c_3 9.24
PF13628DUF4142 5.04
PF02911Formyl_trans_C 2.52
PF01168Ala_racemase_N 1.68
PF00072Response_reg 0.84
PF02325YGGT 0.84
PF13614AAA_31 0.84
PF00398RrnaAD 0.84
PF00216Bac_DNA_binding 0.84
PF03466LysR_substrate 0.84
PF00437T2SSE 0.84
PF03734YkuD 0.84

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 119 Family Scaffolds
COG0223Methionyl-tRNA formyltransferaseTranslation, ribosomal structure and biogenesis [J] 2.52
COG003016S rRNA A1518 and A1519 N6-dimethyltransferase RsmA/KsgA/DIM1 (may also have DNA glycosylase/AP lyase activity)Translation, ribosomal structure and biogenesis [J] 0.84
COG0762Cytochrome b6 maturation protein CCB3/Ycf19 and related maturases, YggT familyPosttranslational modification, protein turnover, chaperones [O] 0.84
COG0776Bacterial nucleoid DNA-binding protein IHF-alphaReplication, recombination and repair [L] 0.84
COG1376Lipoprotein-anchoring transpeptidase ErfK/SrfKCell wall/membrane/envelope biogenesis [M] 0.84
COG3034Murein L,D-transpeptidase YafKCell wall/membrane/envelope biogenesis [M] 0.84

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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms89.92 %
UnclassifiedrootN/A10.08 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300004082|Ga0062384_100466475All Organisms → cellular organisms → Bacteria → Proteobacteria829Open in IMG/M
3300004082|Ga0062384_101154915All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria561Open in IMG/M
3300004799|Ga0058863_11752476All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria604Open in IMG/M
3300005260|Ga0074072_1000052All Organisms → cellular organisms → Bacteria → Proteobacteria64970Open in IMG/M
3300005329|Ga0070683_100022630All Organisms → cellular organisms → Bacteria → Proteobacteria5620Open in IMG/M
3300005335|Ga0070666_10504960All Organisms → cellular organisms → Bacteria → Proteobacteria877Open in IMG/M
3300005344|Ga0070661_100911682All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria726Open in IMG/M
3300005434|Ga0070709_10070754All Organisms → cellular organisms → Bacteria → Proteobacteria2250Open in IMG/M
3300005435|Ga0070714_101930189All Organisms → cellular organisms → Bacteria → Proteobacteria576Open in IMG/M
3300005436|Ga0070713_100153952All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria2047Open in IMG/M
3300005436|Ga0070713_100572921All Organisms → cellular organisms → Bacteria → Proteobacteria1071Open in IMG/M
3300005529|Ga0070741_10051909All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria4957Open in IMG/M
3300005529|Ga0070741_10575151All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria1009Open in IMG/M
3300005530|Ga0070679_100104772All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria2815Open in IMG/M
3300005539|Ga0068853_102371558All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria514Open in IMG/M
3300005548|Ga0070665_100026872All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Ectothiorhodospiraceae → Thioalkalivibrio5798Open in IMG/M
3300005614|Ga0068856_100487352Not Available1254Open in IMG/M
3300005614|Ga0068856_101084588All Organisms → cellular organisms → Bacteria → Proteobacteria818Open in IMG/M
3300005616|Ga0068852_100517646All Organisms → cellular organisms → Bacteria → Proteobacteria1190Open in IMG/M
3300005712|Ga0070764_10041619All Organisms → cellular organisms → Bacteria → Proteobacteria2340Open in IMG/M
3300005712|Ga0070764_10210538Not Available1093Open in IMG/M
3300006176|Ga0070765_100949817All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria813Open in IMG/M
3300006237|Ga0097621_100151797All Organisms → cellular organisms → Bacteria → Proteobacteria1987Open in IMG/M
3300006804|Ga0079221_10840397All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria664Open in IMG/M
3300006804|Ga0079221_11009934All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria625Open in IMG/M
3300006893|Ga0073928_11110981All Organisms → cellular organisms → Bacteria → Proteobacteria535Open in IMG/M
3300007265|Ga0099794_10458102All Organisms → cellular organisms → Bacteria → Proteobacteria669Open in IMG/M
3300009101|Ga0105247_10360437All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria1025Open in IMG/M
3300009174|Ga0105241_12476855All Organisms → cellular organisms → Bacteria → Proteobacteria519Open in IMG/M
3300009545|Ga0105237_10112942Not Available2709Open in IMG/M
3300009551|Ga0105238_10328127All Organisms → cellular organisms → Bacteria → Proteobacteria1517Open in IMG/M
3300010361|Ga0126378_12283388All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria618Open in IMG/M
3300010371|Ga0134125_10155822All Organisms → cellular organisms → Bacteria → Proteobacteria2544Open in IMG/M
3300010371|Ga0134125_11442321All Organisms → cellular organisms → Bacteria → Proteobacteria750Open in IMG/M
3300010373|Ga0134128_11565242All Organisms → cellular organisms → Bacteria → Proteobacteria725Open in IMG/M
3300010373|Ga0134128_11743040All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria685Open in IMG/M
3300010375|Ga0105239_10088031All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria3423Open in IMG/M
3300010376|Ga0126381_103942273All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria578Open in IMG/M
3300010379|Ga0136449_101040874All Organisms → cellular organisms → Bacteria → Proteobacteria1311Open in IMG/M
3300010396|Ga0134126_10001384All Organisms → cellular organisms → Bacteria → Proteobacteria30820Open in IMG/M
3300012096|Ga0137389_10480538All Organisms → cellular organisms → Bacteria → Proteobacteria1065Open in IMG/M
3300012212|Ga0150985_110479186All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria660Open in IMG/M
3300012683|Ga0137398_10292307Not Available1094Open in IMG/M
3300012924|Ga0137413_10265043All Organisms → cellular organisms → Bacteria → Proteobacteria1186Open in IMG/M
3300012925|Ga0137419_10519592All Organisms → cellular organisms → Bacteria → Proteobacteria947Open in IMG/M
3300012927|Ga0137416_10982001All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria754Open in IMG/M
3300012982|Ga0168317_1134840All Organisms → cellular organisms → Bacteria → Proteobacteria511Open in IMG/M
3300013105|Ga0157369_11977470All Organisms → cellular organisms → Bacteria → Proteobacteria591Open in IMG/M
3300014168|Ga0181534_10330613All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria828Open in IMG/M
3300014325|Ga0163163_11254651All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria803Open in IMG/M
3300014487|Ga0182000_10664116All Organisms → cellular organisms → Bacteria → Proteobacteria511Open in IMG/M
3300014654|Ga0181525_10333904All Organisms → cellular organisms → Bacteria → Proteobacteria829Open in IMG/M
3300014969|Ga0157376_10799603All Organisms → cellular organisms → Bacteria → Proteobacteria955Open in IMG/M
3300015242|Ga0137412_10060239All Organisms → cellular organisms → Bacteria → Proteobacteria3090Open in IMG/M
3300018088|Ga0187771_10133707All Organisms → cellular organisms → Bacteria → Proteobacteria2026Open in IMG/M
3300020580|Ga0210403_10922818All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria687Open in IMG/M
3300020582|Ga0210395_10461596All Organisms → cellular organisms → Bacteria → Proteobacteria956Open in IMG/M
3300021168|Ga0210406_10299338Not Available1308Open in IMG/M
3300021170|Ga0210400_10485587All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria1020Open in IMG/M
3300021170|Ga0210400_11003177All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria679Open in IMG/M
3300021180|Ga0210396_10220263All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria1692Open in IMG/M
3300021401|Ga0210393_10811924All Organisms → cellular organisms → Bacteria → Proteobacteria761Open in IMG/M
3300021402|Ga0210385_10764049All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria741Open in IMG/M
3300021404|Ga0210389_10460387Not Available1001Open in IMG/M
3300021405|Ga0210387_10313910Not Available1381Open in IMG/M
3300021406|Ga0210386_10287077All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria1409Open in IMG/M
3300021406|Ga0210386_10621223All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria933Open in IMG/M
3300021474|Ga0210390_11658792All Organisms → cellular organisms → Bacteria → Proteobacteria502Open in IMG/M
3300021475|Ga0210392_10706546All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales751Open in IMG/M
3300021478|Ga0210402_10535967Not Available1087Open in IMG/M
3300021479|Ga0210410_10782037All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria839Open in IMG/M
3300022512|Ga0242676_1044557All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium538Open in IMG/M
3300022533|Ga0242662_10044148All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Marinobacteraceae → Marinobacter1127Open in IMG/M
3300022721|Ga0242666_1125531All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria612Open in IMG/M
3300022726|Ga0242654_10040985Not Available1265Open in IMG/M
3300022726|Ga0242654_10374923All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria541Open in IMG/M
3300024347|Ga0179591_1079669All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter → Steroidobacter denitrificans1867Open in IMG/M
3300025906|Ga0207699_10145225All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria1563Open in IMG/M
3300025912|Ga0207707_10015428All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter → Steroidobacter denitrificans6654Open in IMG/M
3300025913|Ga0207695_11548752All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria543Open in IMG/M
3300025916|Ga0207663_10461081All Organisms → cellular organisms → Bacteria → Proteobacteria981Open in IMG/M
3300025921|Ga0207652_10045737All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria3732Open in IMG/M
3300025924|Ga0207694_10421048All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium1112Open in IMG/M
3300025924|Ga0207694_10545400All Organisms → cellular organisms → Bacteria → Proteobacteria973Open in IMG/M
3300025924|Ga0207694_11540778All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria561Open in IMG/M
3300025928|Ga0207700_11879648All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria525Open in IMG/M
3300025928|Ga0207700_12030933Not Available502Open in IMG/M
3300025934|Ga0207686_11164392All Organisms → cellular organisms → Bacteria → Proteobacteria630Open in IMG/M
3300025944|Ga0207661_11715276All Organisms → cellular organisms → Bacteria → Proteobacteria573Open in IMG/M
3300025945|Ga0207679_11101628All Organisms → cellular organisms → Bacteria → Proteobacteria728Open in IMG/M
3300025945|Ga0207679_11141684All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria715Open in IMG/M
3300026078|Ga0207702_10067973All Organisms → cellular organisms → Bacteria → Proteobacteria3060Open in IMG/M
3300026142|Ga0207698_10557974All Organisms → cellular organisms → Bacteria → Proteobacteria1124Open in IMG/M
3300026557|Ga0179587_11037537All Organisms → cellular organisms → Bacteria → Proteobacteria540Open in IMG/M
3300027908|Ga0209006_10205843All Organisms → cellular organisms → Bacteria → Proteobacteria1707Open in IMG/M
3300027908|Ga0209006_11358197Not Available546Open in IMG/M
3300028379|Ga0268266_10013660All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria6993Open in IMG/M
3300028379|Ga0268266_10037818All Organisms → cellular organisms → Bacteria4109Open in IMG/M
3300028573|Ga0265334_10057526All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria1473Open in IMG/M
3300029951|Ga0311371_10258256All Organisms → cellular organisms → Bacteria → Proteobacteria2506Open in IMG/M
3300029951|Ga0311371_11320485Not Available820Open in IMG/M
3300030007|Ga0311338_11765208All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria559Open in IMG/M
3300030520|Ga0311372_10140323All Organisms → cellular organisms → Bacteria → Proteobacteria4223Open in IMG/M
3300030617|Ga0311356_11512691All Organisms → cellular organisms → Bacteria → Proteobacteria607Open in IMG/M
3300030677|Ga0302317_10453932All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria561Open in IMG/M
3300031708|Ga0310686_112500005All Organisms → cellular organisms → Bacteria → Proteobacteria7768Open in IMG/M
3300031708|Ga0310686_115718743All Organisms → cellular organisms → Bacteria → Proteobacteria5101Open in IMG/M
3300031715|Ga0307476_10132924All Organisms → cellular organisms → Bacteria1778Open in IMG/M
3300031820|Ga0307473_11535913All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria506Open in IMG/M
3300031823|Ga0307478_11713290All Organisms → cellular organisms → Bacteria → Proteobacteria518Open in IMG/M
3300032160|Ga0311301_10833016All Organisms → cellular organisms → Bacteria → Proteobacteria1259Open in IMG/M
3300032515|Ga0348332_10018080All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria609Open in IMG/M
3300032515|Ga0348332_11821449All Organisms → cellular organisms → Bacteria → Proteobacteria722Open in IMG/M
3300032515|Ga0348332_13798491All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria695Open in IMG/M
3300032770|Ga0335085_12300130All Organisms → cellular organisms → Bacteria → Proteobacteria539Open in IMG/M
3300032896|Ga0335075_10074473All Organisms → cellular organisms → Bacteria → Proteobacteria4581Open in IMG/M
3300033134|Ga0335073_12057319All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria520Open in IMG/M
3300033513|Ga0316628_100258181All Organisms → cellular organisms → Bacteria2139Open in IMG/M
3300034268|Ga0372943_0136110All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria1481Open in IMG/M


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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil18.49%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil7.56%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere6.72%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere5.88%
PalsaEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa5.04%
Corn RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere5.04%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil4.20%
Corn RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere4.20%
SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Soil3.36%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere3.36%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil2.52%
SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Soil2.52%
Plant LitterEnvironmental → Terrestrial → Plant Litter → Unclassified → Unclassified → Plant Litter2.52%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere2.52%
Bog Forest SoilEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil1.68%
BogEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Bog1.68%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil1.68%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil1.68%
Surface SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil1.68%
Peatlands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil1.68%
Agricultural SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil1.68%
Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil1.68%
Iron-Sulfur Acid SpringEnvironmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring0.84%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil0.84%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural → Soil0.84%
Tropical PeatlandEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland0.84%
Agricultural SoilEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil0.84%
Weathered Mine TailingsEnvironmental → Terrestrial → Geologic → Mine → Unclassified → Weathered Mine Tailings0.84%
Host-AssociatedHost-Associated → Human → Digestive System → Large Intestine → Fecal → Host-Associated0.84%
Avena Fatua RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere0.84%
Miscanthus RhizosphereHost-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere0.84%
Switchgrass RhizosphereHost-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere0.84%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere0.84%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere0.84%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere0.84%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere0.84%
RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere0.84%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300004082Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3EnvironmentalOpen in IMG/M
3300004799Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - soil CB-3 (Metagenome Metatranscriptome)Host-AssociatedOpen in IMG/M
3300005260Microbial communities on the surface of kaolinite enhanced biochar from soil with fertiliser in Sydney, AustraliaEnvironmentalOpen in IMG/M
3300005329Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaGEnvironmentalOpen in IMG/M
3300005335Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaGHost-AssociatedOpen in IMG/M
3300005344Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaGHost-AssociatedOpen in IMG/M
3300005434Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaGEnvironmentalOpen in IMG/M
3300005435Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaGEnvironmentalOpen in IMG/M
3300005436Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaGEnvironmentalOpen in IMG/M
3300005529Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen16_06102014_R1EnvironmentalOpen in IMG/M
3300005530Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaGEnvironmentalOpen in IMG/M
3300005539Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2Host-AssociatedOpen in IMG/M
3300005548Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaGHost-AssociatedOpen in IMG/M
3300005614Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2Host-AssociatedOpen in IMG/M
3300005616Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2Host-AssociatedOpen in IMG/M
3300005712Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 4EnvironmentalOpen in IMG/M
3300006176Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5EnvironmentalOpen in IMG/M
3300006237Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2)Host-AssociatedOpen in IMG/M
3300006804Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200EnvironmentalOpen in IMG/M
3300006893Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPA 5.5 metaGEnvironmentalOpen in IMG/M
3300007265Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1EnvironmentalOpen in IMG/M
3300009101Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaGHost-AssociatedOpen in IMG/M
3300009174Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaGHost-AssociatedOpen in IMG/M
3300009545Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaGHost-AssociatedOpen in IMG/M
3300009551Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaGHost-AssociatedOpen in IMG/M
3300010361Tropical forest soil microbial communities from Panama - MetaG Plot_23EnvironmentalOpen in IMG/M
3300010371Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1EnvironmentalOpen in IMG/M
3300010373Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4EnvironmentalOpen in IMG/M
3300010375Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaGHost-AssociatedOpen in IMG/M
3300010376Tropical forest soil microbial communities from Panama - MetaG Plot_28EnvironmentalOpen in IMG/M
3300010379Sb_50d combined assemblyEnvironmentalOpen in IMG/M
3300010396Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2EnvironmentalOpen in IMG/M
3300012096Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaGEnvironmentalOpen in IMG/M
3300012212Combined assembly of Hopland grassland soilHost-AssociatedOpen in IMG/M
3300012683Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz2.16 metaGEnvironmentalOpen in IMG/M
3300012924Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012925Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012927Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012982Weathered mine tailings microbial communities from Hibbing, Minnesota, USA - DCWfieldEnvironmentalOpen in IMG/M
3300013105Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaGHost-AssociatedOpen in IMG/M
3300014168Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin17_10_metaGEnvironmentalOpen in IMG/M
3300014325Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaGHost-AssociatedOpen in IMG/M
3300014487Bulk soil microbial communities from Mexico - Magueyal (Ma) metaGEnvironmentalOpen in IMG/M
3300014654Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin06_10_metaGEnvironmentalOpen in IMG/M
3300014969Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaGHost-AssociatedOpen in IMG/M
3300015242Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300018088Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_10_MGEnvironmentalOpen in IMG/M
3300020580Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-MEnvironmentalOpen in IMG/M
3300020582Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-OEnvironmentalOpen in IMG/M
3300021168Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-MEnvironmentalOpen in IMG/M
3300021170Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-MEnvironmentalOpen in IMG/M
3300021180Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-OEnvironmentalOpen in IMG/M
3300021401Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-OEnvironmentalOpen in IMG/M
3300021402Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-OEnvironmentalOpen in IMG/M
3300021404Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-OEnvironmentalOpen in IMG/M
3300021405Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-OEnvironmentalOpen in IMG/M
3300021406Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-OEnvironmentalOpen in IMG/M
3300021474Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-OEnvironmentalOpen in IMG/M
3300021475Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-OEnvironmentalOpen in IMG/M
3300021478Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-MEnvironmentalOpen in IMG/M
3300021479Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-MEnvironmentalOpen in IMG/M
3300022512Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-O (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300022533Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-7-M (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300022721Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-4-O (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300022726Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-30-M (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300024347Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_08_16fungal (PacBio error correction)EnvironmentalOpen in IMG/M
3300025906Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025912Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025913Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025916Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025921Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025924Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025928Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025934Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025944Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025945Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300026078Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026142Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026557Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungalEnvironmentalOpen in IMG/M
3300027908Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O2 (SPAdes)EnvironmentalOpen in IMG/M
3300028379Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300028573Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaGHost-AssociatedOpen in IMG/M
3300029951III_Palsa_N1 coassemblyEnvironmentalOpen in IMG/M
3300030007I_Palsa_E1 coassemblyEnvironmentalOpen in IMG/M
3300030520III_Palsa_N2 coassemblyEnvironmentalOpen in IMG/M
3300030617II_Palsa_N2 coassemblyEnvironmentalOpen in IMG/M
3300030677Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_N3_3EnvironmentalOpen in IMG/M
3300031708FICUS49499 Metagenome Czech Republic combined assemblyEnvironmentalOpen in IMG/M
3300031715Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_05EnvironmentalOpen in IMG/M
3300031820Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515EnvironmentalOpen in IMG/M
3300031823Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05EnvironmentalOpen in IMG/M
3300032160Sb_50d combined assembly (MetaSPAdes)EnvironmentalOpen in IMG/M
3300032515FICUS49499 Metatranscriptome Czech Republic combined assembly (additional data)EnvironmentalOpen in IMG/M
3300032770Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.5EnvironmentalOpen in IMG/M
3300032896Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.4EnvironmentalOpen in IMG/M
3300033134Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.2EnvironmentalOpen in IMG/M
3300033513Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M2_C1_D5_CEnvironmentalOpen in IMG/M
3300034268Forest soil microbial communities from Eldorado National Forest, California, USA - SNFC_MG_FRD_1.2EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
Ga0062384_10046647523300004082Bog Forest SoilMEIFLNLWDELDDLAGACRHIATSFALEASELARPVAALVLTTATVPLGWLASLKNLI*
Ga0062384_10115491513300004082Bog Forest SoilDDLAGACRHIATSFALEAAVLVRPLAALVLTTATVPLSWLASLKNLI*
Ga0058863_1175247623300004799Host-AssociatedDDLVGACRHIATSTAIELTAMARPAATLVVTLAAAPLAWFLKLGA*
Ga0074072_1000052163300005260SoilMEIFLNLWDELDDLVGACRHIATSTAIELAAVARPAVTLVVTLAAAPIGWLLRL*
Ga0070683_10002263063300005329Corn RhizosphereMEIFLNLWDELDDLVGACRHIATSTAIELTAMARPAATLVVTLAAAPLAWFLKLGA*
Ga0070666_1050496013300005335Switchgrass RhizosphereMEIFLNLWDELDDLAGACRHVATATAIELASVARPAFTLVVTLAATPCGWLLKLTPKA*
Ga0070661_10091168223300005344Corn RhizosphereFLNLWDELDDLVGACRHIATSAAIELAAVARPAATLVATLAVAPIGWLLRL*
Ga0070709_1007075413300005434Corn, Switchgrass And Miscanthus RhizosphereMEIFLNLWDELDDLVGACRHIATSTAIELTAIARPAATLIVTLAAAPLGWLLKLGA*
Ga0070714_10193018913300005435Agricultural SoilMEIFLNLWDELDDLVGACRHIATSAAVELTSAARPFATLIVTTAVASVAW
Ga0070713_10015395223300005436Corn, Switchgrass And Miscanthus RhizosphereMEIFLNLWDELDDLVGACRHIATSTAIELTAMARPAATLVVTLAAAPLGWLLRLAG*
Ga0070713_10057292123300005436Corn, Switchgrass And Miscanthus RhizosphereMEIFLNLWDELDDLVGACRHIATSTAIELTAMARPAATLAVTLAAAPLGWLLRL*
Ga0070741_1005190923300005529Surface SoilMEIFLNLWDEIDDFTGACRHIATSFAVEAAALSRPVAASLIALAAAPIGWLESLKNLI*
Ga0070741_1057515123300005529Surface SoilMEKFLNLWDELDDLAGACRHIATSTAVELTSVTRPFASLVVTGAAASLAWMTKLWNPG*
Ga0070679_10010477213300005530Corn RhizosphereWDELDDLVGACRHIATSTAIELTAMARPAATLVVTLAAAPLAWFLKLGA*
Ga0068853_10237155813300005539Corn RhizosphereLWDELDDLVGACRHIATSTAIELTAMARPAATLVVTLAAAPLAWFLKLGA*
Ga0070665_10002687223300005548Switchgrass RhizosphereMEIFLNLWDELDDLAGACRHIATSTAIELAYVARPFATVLVTTAAASLAWFTRLWHSV*
Ga0068856_10048735223300005614Corn RhizosphereMEIFLNLWDELDDLAHACRHIATSTAIELASVARPAFTFLITLAAAPFGWLLKLAPKA*
Ga0068856_10108458813300005614Corn RhizosphereMEIFLNLWDEIDDFTGACRHIATSFAVEAAALSRPMAASLIALAAAPLGWFASLKNLT*
Ga0068852_10051764623300005616Corn RhizosphereMEIFLNLWDELDDLVGACRHIATSTAIELTAMARPAATLVVTLAAAPLAW
Ga0070764_1004161943300005712SoilMEIFLNLWDELDDLAGACRHIATSFALEAAELVRPVAALVLTTAAVPLSWPISLQLSSLKNLIQ*
Ga0070764_1021053813300005712SoilMEIFLNLWDELDDLAGACRHLATSFALEASALGRPLATLLFTTAAVPLTWLGNLKNLI*
Ga0070765_10094981723300006176SoilMEIFLNLWDELDDLAGACRHIATAVALEAAAVVRPLVALVATVPLGWLWSLKNLI*
Ga0097621_10015179723300006237Miscanthus RhizosphereMEIFLNLWDELDDLVGACRHIATSAAIELAAVARPAATLVATLAVAPIGWLLRL*
Ga0079221_1084039723300006804Agricultural SoilMEIFLNLWDELDDLVGACRHIATSTAIELASVARPAATLVATLAAVPLGWLLKNLN*
Ga0079221_1100993423300006804Agricultural SoilDDLVGACRHIATFTAIELTAMARPAATLIVTLAAAPLGWLLKLGA*
Ga0073928_1111098113300006893Iron-Sulfur Acid SpringMEIFLNLWDELDDLVGACRHIATSVALEAADVVRPLVALVATVPLGWLWSLKNLI*
Ga0099794_1045810223300007265Vadose Zone SoilMEIFLNLWDELDDLVGACRHIATSVALETAAVVRPLVALVASVPLGW
Ga0105247_1036043713300009101Switchgrass RhizosphereMEIFLNLWDELDDLAGACRHVATATAIELASVARPAFTLVVTLAAAPCGWLLKLTPKA*
Ga0105241_1247685513300009174Corn RhizosphereMEIFLNLWDELDDLVGACRHIATSTAIELTAMARPAATLVVTLAAAPLAWLLRI*
Ga0105237_1011294223300009545Corn RhizosphereMEIFLNLWDELDDLAHACRHIATSTAIELASVARPAFTFLVTLAAAPFGWLFKLAPRA*
Ga0105238_1032812723300009551Corn RhizosphereMFLLNLWDELDDLTHACRHLATSTAMELVDAIRPVAALIVTVAALPLAWLLKP*
Ga0126378_1228338813300010361Tropical Forest SoilMEIFLNLWDELDDLAGACRHIATSFAIEATAVARPAATALLTLLAAPLGYLLSLKNLI*
Ga0134125_1015582233300010371Terrestrial SoilMEIFLNLWDELDDLVGACRHIATSTAVELTGIARPAATLVVTLAAAPLGWLLRLGG*
Ga0134125_1144232123300010371Terrestrial SoilMEIFLNLWDELDDLAGACRHIATSTAFELVCVVRAFATLVVTTAAASLASLTRLWPTG*
Ga0134128_1156524223300010373Terrestrial SoilMEIFLNLWDELDDLAGACRHVATSTAIELASVAGPAFTLVVTLAAAPFGWLLKLAPRA*
Ga0134128_1174304023300010373Terrestrial SoilMEIFLNLWDEIDDFAGACRHIATSYAVEAAALSRPMAASLLALAATPLAWISSLKNLT*
Ga0105239_1008803113300010375Corn RhizosphereMEIFLNLWDEIDDFTGACRHIATSFAVEAAALSRPMAASLIALAAAPL
Ga0126381_10394227323300010376Tropical Forest SoilMEIFLNLWDELDDLVGACRHIATSTAIELTAVARPAATLVVTLAAAPLGWLLKLGA*
Ga0136449_10104087433300010379Peatlands SoilMEIFLNLWDELDDLAGACRHIATSVALEAAAVVRPLVALAAPVPLGWLWSLKNLI*
Ga0134126_10001384243300010396Terrestrial SoilMEIFLNLWDELDDLVGACRHLATSAVIEVASLARPAATLILSLAAAPLVWLMRLGA*
Ga0137389_1048053823300012096Vadose Zone SoilMEIFLNLWDELDDLVGACRHIATSVALEAAAVARPMAAVVATVPLGWLWSLKNLI*
Ga0150985_11047918623300012212Avena Fatua RhizosphereLDDLVGACRHIATCTAIELTAMARPATTLVVTLAAAPLGWLLRLAG*
Ga0137398_1029230723300012683Vadose Zone SoilGACRHIATSVVLEAAAVVRPLVALVATVPLGWLWSLKNLI*
Ga0137413_1026504323300012924Vadose Zone SoilMEIFLNLWDELDDLAGACRHIATSVALEAAAVVRPLVALVATVPLGWLWSLKNLI*
Ga0137419_1051959223300012925Vadose Zone SoilMEIFLNLWDELDDLVGACRHIATSVALEAAAVVQPLVALVATVPLGWLWSLKNLI*
Ga0137416_1098200123300012927Vadose Zone SoilMEIFLNLWDELDDLVGACRHIATSVALETAAVVRPLVALVASVPLGWLWSLKNLI*
Ga0168317_113484023300012982Weathered Mine TailingsMEIFLNLWDELDDLVGACRHIATSTAIELTAMARPAATLVLTLAAAPLGWLLRL*
Ga0157369_1197747013300013105Corn RhizosphereMEIFLNLWDELDDLVGACRHIATSTAVELTAIARPAATLVVTLAAAPLGWLLRLGG*
Ga0181534_1033061323300014168BogMEIFLNLWDEIDDFLGACRHIATSYAVEAATLARPAAAALIALATLPLSWFLSLKNLM*
Ga0163163_1125465113300014325Switchgrass RhizosphereMEIFLNLWDELDDLAHACRHIATSTAIELASVARPAFTFLVTLAAAPFGWLLKLAPRA*
Ga0182000_1066411623300014487SoilMEIFLNLWDELDDLAGACRHIATSTAVELAYVARPFATLVVTTAAASLAWFTRLWHSA*
Ga0181525_1033390423300014654BogMEIFLNLWDEIDDLAGACRHIATSFAVEAAALTRPYAAALLALVAAPLGWFLSLKNLM*
Ga0157376_1079960313300014969Miscanthus RhizosphereMEIFLNLWDELDDLVGACRHIATSAAIELATVARPATTLVTTLAVAPIKWLLQL*
Ga0137412_1006023923300015242Vadose Zone SoilMEIFLNLWDELDDLVGACRHIATSVALEAAAVARPLAAVVATVPLGWLWSLKNLI*
Ga0187771_1013370723300018088Tropical PeatlandMEIFLNLWDELDDLVGACRHIATSMLLKLPPWPAATVLLTAAAAPLGWLLRLKNLI
Ga0210403_1092281823300020580SoilMEIFLNLWDELDDLVGACRHIATSFAVEAAALARPAATVLLTVAAAPLGSLLSLKNLI
Ga0210395_1046159623300020582SoilMEIFLNLWDELDDLAGACRHIATSFALEAAELARPVAALVLTTATVPLGWLASLKNLI
Ga0210406_1029933823300021168SoilMEIFLNLWDELDDLAGACRHIATSVALEAADVVRPLVALVATVPLGWLWSLKNLI
Ga0210400_1048558723300021170SoilMEIFLNLWDELDDLAGACRHIATAVALEAAAVVRPLVALVATVPLGWLWSLKNLI
Ga0210400_1100317723300021170SoilMEIFLNLWDELDDLAGACRHIATSFALEAAELARPMAALVLTTATVPLGWLASLKNLI
Ga0210396_1022026323300021180SoilMEIFLEPVDELDDLAGACRHIATAVALEAAAVVRPLVALVATVPLGWLWSLKNLI
Ga0210393_1081192423300021401SoilMEIFLNLWDELDDLAGACRHIATSFALEAAELVRPVAALVLTTAVVPLSWPITLQLSSLKNLIQ
Ga0210385_1076404923300021402SoilMEIFLNLWDELDDLAGACRHIATSFALEAAELVRPVAALVLTTAAVPLSWPISLQLSSLKNLIQ
Ga0210389_1046038723300021404SoilTVRPHMEIFLNLWDELDDLAGACRHVATSFALEAASLARPLAALVLTTATVPLSWLASLKNLI
Ga0210387_1031391023300021405SoilMEIFLNLWDELDDLAGACRHIATSVALEAAAVVRPLVALVATVPLGWLWSLKNLI
Ga0210386_1028707723300021406SoilMEIFLNLWDELDDLAGACRHIATSFAVEAAALARPAATVLLTVATAPLGSLLSLKNLI
Ga0210386_1062122323300021406SoilMEIFLNLWDEIDDFAGACRHIATSFAVEAAALSRPLAASLLALIAAPLGWFFSLKNLL
Ga0210390_1165879213300021474SoilMEIFLNLWDELDDLAGACRHIATSFAIEAASLTRPAATVLLTAAAAPLGWLLSLKNLI
Ga0210392_1070654623300021475SoilMEIFLNLWDEIDDFLGACRHIATSFAVEAATLARPVAAPLVALAALPLSWLFSLKNLM
Ga0210402_1053596723300021478SoilLWDELDDLAGACRHIATSVALEAADVLRPLVALVVTVPLGWLWSLKNLI
Ga0210410_1078203723300021479SoilMEIFLNLWDEIDDFAGACRHIATSFAVEAAALSRPMAASLLALAATPLAWIWSLKNLT
Ga0242676_104455723300022512SoilMEIFLNLWDEIDDFAGACRHIATSFAVEAATLSRPLAVSLLTLAAAPLGWFSSLKNLM
Ga0242662_1004414833300022533SoilWDELDDLVGACRHIATSVALEAADVVRPLVTLVATVPLGWLWSLKNLI
Ga0242666_112553113300022721SoilLWDELDDLAGACRHIATSFALEAAELARPMAALVLTTATVPLGWLASLKNLI
Ga0242654_1004098523300022726SoilDELDDLVGACRHIATSVALEAADVVRPLVAVIATVPLGWLWSLKNLI
Ga0242654_1037492323300022726SoilNLWDEIDDFAGACRHIATSFAVEAAALSRPMAASLLALAATPLAWIWSLKNLT
Ga0179591_107966923300024347Vadose Zone SoilMEIFLNLWDELDDLVGACRHIATSVALEAAAVVRPLVALVATVPLGWLWSLKNLI
Ga0207699_1014522523300025906Corn, Switchgrass And Miscanthus RhizosphereMEIFLNLWDELDDLVGACRHIATSTAIELTAIARPAATLIVTLAAAPLGWLLKLGA
Ga0207707_1001542863300025912Corn RhizosphereMEIFLNLWDELDDLVGACRHIATSTAIELTAMARPAATLVVTLAAAPLAWFLKLGA
Ga0207695_1154875223300025913Corn RhizosphereMEIFLNLWDEIDDFTGACRHIATSFAVEAAALSRPMAASLIALAAAPLGWFASLKNLT
Ga0207663_1046108113300025916Corn, Switchgrass And Miscanthus RhizosphereMEIFLNLWDELDDLVGACRHIATSTAIELTAIARPAATLIVTLAAAPLGWLLK
Ga0207652_1004573733300025921Corn RhizosphereMEIFLNLWDELDDLVGTCRHIATSTAIELTAMARPAATLVVTLAAAPLAWFLKLGA
Ga0207694_1042104823300025924Corn RhizosphereMQMEIFLNLWDELDDLAGACRHIATSTAIELAYVARPFATVLVTTAAASLAWFTRLWHSV
Ga0207694_1054540023300025924Corn RhizosphereMFLLNLWDELDDLTHACRHLATSTAMELVDAVRPAAALIVAVAAIPLAWLLKA
Ga0207694_1154077823300025924Corn RhizosphereFLNLWDELDDLTHACRHLATSTAMELVDAIRPVAALIVTVAALPLAWLLKP
Ga0207700_1187964813300025928Corn, Switchgrass And Miscanthus RhizosphereIFLNLWDELDDLVGACRHIATSTAIELTAMARPAATLAVTLAAAPLGWLLRL
Ga0207700_1203093313300025928Corn, Switchgrass And Miscanthus RhizosphereMEIFLNLWDELDDLAHACRHIATSTAIELASVARPAFTFLVTLAAAPFGWLLRLAPKA
Ga0207686_1116439213300025934Miscanthus RhizosphereMEIFLNLWDELDDLVGACRHIATSAAIELAAVARPAATLVATLAVAPIGWLLRL
Ga0207661_1171527613300025944Corn RhizosphereMEIFLNLWDELDDLVGACRHIATSTAIELTALARPAATLVATLAAAPLGWLLRLAG
Ga0207679_1110162813300025945Corn RhizosphereMEIFLNLWDELDDLVGACRHIATSTAIELTAMARPAATLVVTLAAAPLAWFL
Ga0207679_1114168413300025945Corn RhizosphereCRHIATSTAIELTAIARPAATLIVTLAAAPLGWLLKLGA
Ga0207702_1006797323300026078Corn RhizosphereMEIFLNLWDELDDLAHACRHIATSTAIELASVARPAFTFLITLAAAPFGWLLKLAPKA
Ga0207698_1055797413300026142Corn RhizosphereMEIFLNLWDELDDLVGACRHIATSTAIELTAMARPAATLVVTLAAAPLAWLLRI
Ga0179587_1103753723300026557Vadose Zone SoilMEIFLNLWDELDDLVGACRHIATSVALETAAVVRPLVALVASVPLGWLWSLKNLI
Ga0209006_1020584313300027908Forest SoilMEIFLNLWDELDDLAGACRHIATSFALEAAELVRPVAALVLTTAAVPLSWLGSLKNLI
Ga0209006_1135819713300027908Forest SoilMEIFLNLWDEIDDFLGACRHIATSYAVEAATLARPAAAALIALATLPLSWFLSLKNLM
Ga0268266_1001366083300028379Switchgrass RhizosphereMEIFLNLWDELDDLAGACRHVATATAIELASVARPAFTLVVTLAATPCGWLLKLTPKA
Ga0268266_1003781823300028379Switchgrass RhizosphereMEIFLNLWDELDDLAGACRHIATSTAIELAYVARPFATVLVTTAAASLAWFTRLWHSV
Ga0265334_1005752623300028573RhizosphereMEIFLNLWDELDDLVGACRHVATSTAIELTAMARPAATLVVTLAAAPLGWLLRL
Ga0311371_1025825613300029951PalsaMEIFLNLWDELDDLVGACRHIATSFALEASALARPLATLLFTAAAIPLSWLGSLKNLI
Ga0311371_1132048523300029951PalsaHMEIFLNLWDELDDLVGACRHLATSFALEASALARPLATLLFTTAAVPLSWLGSLKNLI
Ga0311338_1176520813300030007PalsaMEIFLNLWDELDDLVGACRHIATSFALEASALARPLATLIFTTAAVPLSWLGSLKNLI
Ga0311372_1014032353300030520PalsaMEIFLNLWDELDDLVGACRHLATSFALEASALARPLATLLFTTAAVPLSWLGSLKNLI
Ga0311356_1151269113300030617PalsaMEIFLNLWDELDDLVGACRHLATSFALEASALARPLATLIFTTAAVPLSWLGSLKNLI
Ga0302317_1045393213300030677PalsaLDDLVGACRHIATSFALEASALARPLATLLFTATAIPLSWLGSLKNLI
Ga0310686_11250000583300031708SoilMEIFLNLWDEIDDFAGACRHIATSFAVEAAALSRPVAASLLTLAAVPLGWILSLKNLT
Ga0310686_11571874323300031708SoilMEIFLNLWDELDDLAGACRHIATSFAVEVAALARPLATLVLTTAAVPLSWLTSLKNLI
Ga0307476_1013292433300031715Hardwood Forest SoilMEIFLNLWDELDDLAGACRHIATSFALEAAELARPMAALVLTTATVPL
Ga0307473_1153591313300031820Hardwood Forest SoilMEIFLNLWDELDDLVGACRHIATSVALEAADVVRPLVALAATVPLGWLWSLKNLI
Ga0307478_1171329023300031823Hardwood Forest SoilMEIFLNLWDELDDLAGACRHIATSFALEAAELARPMAALVLTTATVP
Ga0311301_1083301623300032160Peatlands SoilMEIFLNLWDELDDLAGACRHIATSVALEAAAVVRPLVALAAPVPLGWLWSLKNLI
Ga0348332_1001808023300032515Plant LitterLNLWDELDDLAGACRHIATSFALEAATLVRPLVALVLTTATVPLSWLASLKNLI
Ga0348332_1182144913300032515Plant LitterMEIFLNLWDELDDLAGACRHIATSFALEAAELVRPVAALVLTTATVPLGWLGSLKNLI
Ga0348332_1379849123300032515Plant LitterMEIFLNLWDELDDLAGACRHIATSFAVEAAALARPLATLVLTTAAVPLSWLTSLKNLI
Ga0335085_1230013023300032770SoilMEIFLNLWDEIDDWVGACRHIATSFAVEAATLSRPLAASLLTLAAV
Ga0335075_1007447373300032896SoilMEIFLNLWDELDDLVGACRHIATSTAIELTAITRPAATLVVTLAAAPLGWLLKLQA
Ga0335073_1205731923300033134SoilWDELDDLAHACRHIATSYAVEAASLARPAATVLLTIAVAPLSSLKNLI
Ga0316628_10025818123300033513SoilMEIFLHLWDELDDLAGACRHIATSTAVEATALVRARAAKALVTILGALALRWPPR
Ga0372943_0136110_1308_14813300034268SoilMEIFLNLWDELDDLAGACRHIATSTAIELAYVARPFATLVVTAAAASLGWFTRLWHSV

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Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
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